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* Merge branch 'develop' of ↵Jacob Smith2019-07-2253-904/+1088
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage
| * Updates to warnhist script, along with a few cleanups, and add some commentsQuincey Koziol2019-07-107-5/+87
| | | | | | | | to warning cleanups that are a bit obscure.
| * Add support for GCC9, update warnhist script, and clean up warnings.Quincey Koziol2019-07-0317-90/+125
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| * Merge pull request #1787 in HDFFV/hdf5 from ↵Dana Robinson2019-07-023-215/+238
| |\ | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:develop_minor_pr to develop * commit 'f250815151df8da8a93c0ff781a3cf134f1c6cbd': Cleaned up misc warnings.
| | * Cleaned up misc warnings.Dana Robinson2019-06-293-215/+238
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| * | Move the -Wformat-nonliteral warning to the developer flags. Fix bugsQuincey Koziol2019-06-291-1/+0
| | | | | | | | | | | | I introduced in the last commit.
| * | Merge branch 'develop' into feature/update_gcc_flagsQuincey Koziol2019-06-287-143/+106
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| | * Merge pull request #1782 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:warning_fixes ↵Dana Robinson2019-06-283-36/+47
| | |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '1c4101c6a77dd9223483dd9e3f7bec0f9e92f435': Fixed various warnings in testhdf5 files. Warning fixes: * fix for static/const flipped in H5Dint.c * Removed missing done target in H5Rint.c * Fixed misleading indentation in h5format_convert.c
| | | * Fixed various warnings in testhdf5 files.Dana Robinson2019-06-283-36/+47
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| | * | Merge pull request #12 in ~VCHOI/my_third_fork from develop to ↵Vailin Choi2019-06-272-12/+24
| | |\ \ | | | |/ | | | | | | | | | | | | | | | | | | | | bugfix/new_shutdown_fsm * commit '2c69584fb124c20e1dd06c31f2baf240b50b381c': Fixed missing return value checks in VDS tests.
| | * | Merge branch 'develop' of ↵Vailin Choi2019-06-265-242/+282
| | |\ \ | | | | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~vchoi/my_third_fork into bugfix/new_shutdown_fsm
| | * \ \ Merge pull request #8 in ~VCHOI/my_third_fork from develop to ↵Vailin Choi2019-06-2420-50/+62
| | |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bugfix/new_shutdown_fsm * commit '35fd0ec8ceffe96cee352187154da15c967fb990': Updated H5Tcopy() to get the dataset's datatype through the VOL when that is passed in as the object ID. Fix fortran test and test library linking Update GCC 6 & 7 flags for CMake builds Move -Wnormalized down into GCC 6.x flags Put the memcpy overlap check back into H5MM. Fixed the heap overflow in t_filters_parallel Fixed some low-hanging fruit from -fsanitize in t_filters_parallel. Add lib dir for testing plugins Add support for GCC 7.x warnings, update warnhist script to account for them, clean up warnings. Add H5_HLDLL prefix for windows link HDFFV-10805 cleanup examples and test code Fix minor typo in H5S_select_iter_release Add missing fortran mods HDFFV-10805 Fix test of library libinfo Cleanup possible CMake target conflicts Correct CMake issues
| | * | | | Checkin for new shutting down free-space manager.Vailin Choi2019-06-204-105/+63
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| * | | | | Updated configure & CMake compiler flags for GCC 8.x, along with correspondingQuincey Koziol2019-06-2814-199/+217
| | |_|_|/ | |/| | | | | | | | | | | | | | | | | | changes to warnhist script (and some extra improvements for condensing C++ and Java warnings), and fixed a bunch of warnings.
| * | | | Fixed missing return value checks in VDS tests.Dana Robinson2019-06-272-12/+24
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| * | | Merge pull request #1772 in HDFFV/hdf5 from ↵Vailin Choi2019-06-261-232/+272
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10808-h5pset_file_space_strategy-succeeds to develop * commit '3768566139df18928aa29ece0eff3010b224633b': Add release notes. Correct hid_t error value to H5I_INVALID_HID in tests related to libver_bounds. Fix for HDFFV-10808 H5Pset_file_space_strategy succeeds when using H5Pset_libver_bounds v18,v18. Fails file creation when non-default free-space info is set in fcpl and the library version high bound is less than v110 because free-space info message is introduced in library release v110.
| | * | | Correct hid_t error value to H5I_INVALID_HID in tests related to libver_bounds.Vailin Choi2019-06-251-112/+112
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| | * | | Fix for HDFFV-10808 H5Pset_file_space_strategy succeeds when using ↵Vailin Choi2019-06-241-123/+163
| | | |/ | | |/| | | | | | | | | | | | | | | | | | | | | H5Pset_libver_bounds v18,v18. Fails file creation when non-default free-space info is set in fcpl and the library version high bound is less than v110 because free-space info message is introduced in library release v110.
| * | | Banish enum increment warningsDana Robinson2019-06-263-6/+6
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| * | | Fixed a memory issue in trefer.c.Dana Robinson2019-06-251-4/+4
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| * | Add support for GCC 7.x warnings, update warnhist script to account for them,Quincey Koziol2019-06-2119-44/+49
| | | | | | | | | | | | clean up warnings.
| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-06-201-1/+27
| |\ \ | | |/ | | | | | | | | | | | | * commit '2e973f7e12301975f9d8dfdd5534682525554e77': Fix minor typo in H5S_select_iter_release Fix memory leak in objcopy test after H5Aread of vlen data
| * | HDFFV-10805 Fix test of library libinfoAllen Byrne2019-06-191-6/+13
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* | | Minor formatting adjustments.Jacob Smith2019-07-222-106/+100
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* | | Merge branch 'develop' into bugfix/repack_external_storageJacob Smith2019-06-2014-1105/+2133
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| * | Fix memory leak in objcopy test after H5Aread of vlen dataJerome Soumagne2019-06-191-1/+27
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| * Merge pull request #1750 in HDFFV/hdf5 from ↵Dana Robinson2019-06-191-202/+150
| |\ | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:ohdr_test_memory_issue to develop * commit '6a1e9a1fbe9606d0dd3452092cab17794e131e64': Fixed a problem in the ohdr test where hard-coded strings passed to H5Awrite() triggered -fsanitize failures.
| | * Fixed a problem in the ohdr test where hard-coded strings passedDana Robinson2019-06-191-202/+150
| | | | | | | | | | | | to H5Awrite() triggered -fsanitize failures.
| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-06-181-0/+748
| |\ \ | | |/ | | | | | | | | | | | | | | | | | | * commit '712a2a13d8add828d053135a172abb2e819d59ad': Fixed a warning in H5CX.c concerning incorrect use of freeing VOL connector info. Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, to share dataspace's selection with iterator (and with caution about not modifying or closing the dataspace while the iterator is open). Fix misc. typos, etc. from code review New hyperslab selection routines and new public selection iterator routines.
| | * Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, toQuincey Koziol2019-06-171-171/+182
| | | | | | | | | | | | | | | share dataspace's selection with iterator (and with caution about not modifying or closing the dataspace while the iterator is open).
| | * Merge branch 'develop' into merge_hyperslab_04Quincey Koziol2019-06-174-5/+91
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| | * | New hyperslab selection routines and new public selection iterator routines.Quincey Koziol2019-06-161-0/+737
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| * | | HDFFV-10805 Add option to only build shared targetsAllen Byrne2019-06-184-827/+169
| | |/ | |/| | | | | | | | | | HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static HDFFV-10803 Update FindSZIP.cmake find module Remove unneeded modules and update java modules
| * | Merge pull request #1729 in HDFFV/hdf5 from ↵Vailin Choi2019-06-174-4/+90
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10800-h5ocopy-failure to develop * commit 'dfdc27b04b2e8bcd1985ba90ce6553d8b3805fda': Fix release notes based on feedback from pull request. Fix for HDFFV-10800 H5Ocopy failure: The value for the H5F_LIBVER_V18 index in H5O_fill_ver_bounds[], the format version bounds array for fill value message, should be version 3 not 2.
| | * | Fix for HDFFV-10800 H5Ocopy failure:Vailin Choi2019-06-124-4/+90
| | | | | | | | | | | | | | | | | | | | The value for the H5F_LIBVER_V18 index in H5O_fill_ver_bounds[], the format version bounds array for fill value message, should be version 3 not 2.
| * | | Fixed problem with H5Fdelete "test" and split VFD.Dana Robinson2019-06-161-1/+1
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| * | Added the creation and use of an attribute access property list toDana Robinson2019-06-151-49/+60
| | | | | | | | | | | | testhdf5.
| * | Merge branch 'develop' into vol_dev_headersDana Robinson2019-06-143-20/+880
| |\ \ | | | | | | | | | | | | | | | | Also moved the wrapper functions from the H5VLconnector.h to H5VLconnector_passthru.h
| | * | Added H5Fdelete call and VOL support (but no VFD/native implementation).Dana Robinson2019-06-111-0/+107
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| | * Added a VOL initialization property list type.Dana Robinson2019-06-051-14/+37
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| | * Refactor H5S__hyper_project_intersection to operate directly on spanNeil Fortner2019-06-011-1/+719
| | | | | | | | | | | | | | | trees, improving performance and removing the conditionn that the extents be equal.
| | * Added code that disallows unregistering the native VOL connector.Dana Robinson2019-05-241-6/+18
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| * | Split VOL connector routines into separate headers:Dana Robinson2019-05-241-0/+7
| |/ | | | | | | | | | | | | | | | | * H5VLconnector.h for terminal connector things * H5VLconnector_passthru.h for passthrough connector things Note that these headers are arranged such that they are included in hdf5.h so VOL connectors only need to include that. The separation into multiple headers is mainly for readability.
| * Correct message command syntaxAllen Byrne2019-05-171-2/+2
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* | Some minor reformatting.Jacob Smith2019-05-241-193/+241
| | | | | | | | Replace tabs with spaces.
* | Add test that uses the family member FAPL setting.Jacob Smith2019-05-241-0/+112
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* Merge pull request #1605 in HDFFV/hdf5 from merge_hyperslab_update_01 to developQuincey Koziol2019-04-301-89/+1309
|\ | | | | | | | | | | | | * commit '08b009cc4ab2a8d8d289697d6d4688c0e5c53c6e': Clean up if-else chain. Remove thread-local copy of hyperslab operation generation value. Core changes to selection code from the hyperslab_updates branch.
| * Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-2923-1111/+2848
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| * \ Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-061-0/+79
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| * \ \ Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-056-165/+192
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