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* * Made H5FD_driver_query() a private function instead of static.Dana Robinson2017-05-241-6/+30
| | | | | | | * Moved H5FD_driver_query() to H5FDint.c. * Minor typo fixes in H5I.c. * Updated swmr.c to check the VFD feature flags and skip the retries test when the VFD is not compatible with H5P_DEFAULT.
* Initialized IDs to -1 and minor code tidy.Dana Robinson2017-05-241-6/+6
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* Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c -lrknox2017-05-101-1/+1
| | | | | changed to H5Dopen2 to fix failure with --with-default-api-version=v16 configure option.
* Fix for the two issues reported in HDFFV-10051Vailin Choi2017-05-091-13/+6
| | | | | Modifications made based on the review comments from pull request #494 Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu.
* Fix for the two issues reported in HDFFV-10051:Vailin Choi2017-05-071-0/+119
| | | | | | | | | | | (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
* Comment out install-exec-hooks to remove libdynlib* files. Allen didlrknox2017-04-281-2/+2
| | | | | | | the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably work. In the develop branch they are causing make install failures because the autotools' install commands sometimes attempt to chmod these files when they no longer exist.
* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-25171-1026/+698
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Fix typoAllen Byrne2017-04-241-1/+1
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* Signature change requires a ptrAllen Byrne2017-04-241-8/+8
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* Change H5PLsize() signatureAllen Byrne2017-04-241-8/+15
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* Revert HDFFV-9655Allen Byrne2017-04-241-5/+9
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* Revert HDFFV-9655 by disabling test and not using new function.Allen Byrne2017-04-241-6/+9
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* Fix path to actual executable locationAllen Byrne2017-04-241-12/+13
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* Windows ahs one more directory levelAllen Byrne2017-04-241-1/+3
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* Comment out failing plugin test until fixed (unexpected .libs in plugin test ↵lrknox2017-04-221-11/+11
| | | | directory path with '@').
* Merge pull request #449 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-04-211-2/+14
|\ | | | | | | | | | | * commit '7bd516f2ead21e8470cc25c0b664ad6b56c723a0': Our best effort to build dynamic plugin tests and not install them with "make install". It seems the install-exec-hook doesn't remove the last to be installed. Add targets for plugin test libraries to avoid linking to external libs.
| * Our best effort to build dynamic plugin tests and not install them withlrknox2017-04-211-16/+14
| | | | | | | | | | "make install". It seems the install-exec-hook doesn't remove the last to be installed.
| * Add targets for plugin test libraries to avoid linking to external libs.lrknox2017-04-201-1/+15
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* | Merge remote-tracking branch 'origin/develop' intoAllen Byrne2017-04-219-720/+1560
|\ \ | |/ | | | | bugfix/HDFFV-9655-plugin-path-relative
| * The cache_image test shows a skipped message about EoC in parallel.Dana Robinson2017-04-202-10/+9
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| * Added code to disable the evict-on-close feature inDana Robinson2017-04-192-0/+108
| | | | | | | | the parallel library.
| * HDFFV-10170 undo patchAllen Byrne2017-04-181-7/+6
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| * Add plugin options for libsAllen Byrne2017-04-181-0/+4
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| * HDFFV-10170 fix command syntaxAllen Byrne2017-04-171-1/+1
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-04-171-17/+89
| |\ | | | | | | | | | | | | * commit '5f7822fac4673cdb9e8ed60d104566c9df43303f': Express test mods to test/cache.c
| | * Express test mods to test/cache.cmainzer2017-04-151-17/+89
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Modified test/cache.c to skip the smoke checks with paged aggregation for all express test levels other than 0 Change to src/H5PL.c seems to be the result of autogen.sh. As it seems to be correct, I am checking it in. Tested serial and parallel (debug only) on jelly.
| * | HDFFV-10170 chnage test libs to noinst typeAllen Byrne2017-04-131-4/+1
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| * Skip tests for page buffering in test/fheap.c for parallel buildVailin Choi2017-04-131-2/+11
| | | | | | | | | | Skip the two tests for page buffering in test/fheap.c because this feature is disabled in parallel. Activate full testing when this feature is re-enabled in the future for parallel build.
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2017-04-111-2/+2
| |\ | | | | | | | | | | | | | | | * commit '2821b8bd768138db6b5f917a5b7325f878f8f7d0': Fix URL name DAILYTEST-250 change test props to reduce timeout
| | * DAILYTEST-250 change test props to reduce timeoutAllen Byrne2017-04-111-2/+2
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| * | Fix for H5Dset_extent test failure with extensive array indexing (HDFFV-9771)Vailin Choi2017-04-112-49/+31
| |/ | | | | | | | | 1) Calculate chunk index for extensive array index based on swizzled max chunks when unlim_dim > 0 2) Minor fixes to test/fheap.c that somehow were missed from last check in. See pull request #396 review comments.
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2017-04-071-0/+1
| |\ | | | | | | | | | | | | | | | | | | * commit '4a05d27c6fcef81612e005b6f6429ab362247492': HDFFV-10143 add missing javadoc param Add missing test status Fix CMake regex commands
| | * Add missing test statusAllen Byrne2017-04-061-0/+1
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| * | Modify test/fheap.c to run with various file space strategies and/or page ↵Vailin Choi2017-04-051-301/+368
| |/ | | | | | | | | | | | | | | buffering Modify test/fheap.c to run with different combinations of file space strategies and page buffering only when ExpressMode is 0 (HDF5TestExpress is 0). Tested on ostrich, platypus, mayll, emu, osx1010test, quail, kite, kituo.
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-04-051-8/+13
| |\ | | | | | | | | | | | | * commit '60bb3fd1108e2006a79b008d031a0f68a1e6b393': Re-enabled fixed array index testing in the test_random_rank4_vl() test in test/set_extent. This was fixed some time ago, but the test was never re-enabled for that index type.
| | * Re-enabled fixed array index testing in the test_random_rank4_vl() testDana Robinson2017-04-051-8/+13
| | | | | | | | | | | | | | | in test/set_extent. This was fixed some time ago, but the test was never re-enabled for that index type.
| * | Fix typo deletionAllen Byrne2017-04-041-2/+2
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| * | HDFFV-10143 clean up format and function returnAllen Byrne2017-04-041-348/+306
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| * | Update with checks for index boundsAllen Byrne2017-04-031-11/+14
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| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-04-032-14/+588
| |\ \ | | |/ | | | | | | | | | | | | | | | | | | | | | | | | * commit '2412158ed8326a3f3d62fbd947e470667d0b5951': Add new file COPYING_LBNL_HDF5. Revert "Clear hdf5 1.10 entries from RELEASE.txt in the develop branch. Entries" Add LBNL license file and modify COPYING file accordingly. Omnibus checkin for several relatively minor modifications: Clear hdf5 1.10 entries from RELEASE.txt in the develop branch. Entries in this branch version of RELEASE.txt should be intended for the future 1.12.0 release. Fix HDFFV-8089 Description: Some code within an "ifdef H5D_CHUNK_DEBUG" block was using outdated data structure but not caught because the case of H5D_CHUNK_DEBUG being defined was never tested. It was commented out. I defined H5D_CHUNK_DEBUG, tested, and commented out again. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| | * Omnibus checkin for several relatively minor modifications:mainzer2017-03-282-14/+588
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | 1) Added code test/page_buffer.c to verify that page buffering is disabled in parallel builds. 2) Added code to test/cache_image.c to verify correct interaction between evict on close and cache image -- in particular management of a file containing a cache image containing dirty metadata that has been opened R/O. Also fix for the bug exposed. 3) Added code to testpar/t_cache_image.c to verify expected procedure for reading cache images, and also supporting stats collection code needed for the test. 4) Repair of an overactive sanity check in H5C__reconstruct_cache_contents(). 5) Other minor tidies in passing. Tested serial and parallel, debug and production on Jelly.
| * | HDFFV-10143 surround will fail with try blockAllen Byrne2017-03-301-1/+4
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| * | HDFFV-10143 typo cleanupAllen Byrne2017-03-301-4/+4
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| * | HDFFV-10143 typo removedAllen Byrne2017-03-301-1/+1
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| * | Fix code error and use H5PL_MAX_PATH_NUM in testAllen Byrne2017-03-301-13/+17
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| * | HDFFV-10143 Cleanup due to commentsAllen Byrne2017-03-301-7/+7
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| * | HDFFV-10143 remove debugging outputAllen Byrne2017-03-301-6/+0
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| * | HDFFV-10143 change h5PLget to use buffer like H5Iget_nameAllen Byrne2017-03-301-12/+41
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| * | HDFFV-10143 change put to replace and add constAllen Byrne2017-03-301-1/+1
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| * | HDFFV-10143 Fix initial issues from reviewAllen Byrne2017-03-301-60/+92
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