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* [svn-r5605] Purpose:Quincey Koziol2002-06-122-3/+2
| | | | | | | | | | Code cleanup Description: Clean up some compiler warnings... Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5603] Purpose:Quincey Koziol2002-06-121-5/+6
| | | | | | | | | | | | | | | | Bug fix Description: I/O on "Regular" hyperslab selections could fail to transfer correctly if the number of elements in the selection's row did now fit "evenly" into the buffer being used for the transfer. Solution: Correct the calculation of the block & count offsets within the optimized "regular" hyperslab routines. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5597] Purpose:Quincey Koziol2002-06-111-1/+9
| | | | | | | | | | | | | | Code cleanup Description: The test for inserting a compound datatype into itself (which should fail) is issuing warnings about this failure. Solution: Turn the warnings off during this test. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5596] Elena Pourmal2002-06-111-0/+84
| | | | | | | | | | | Purpose: Bug #774 fix Description: Added a test for the H5Tenum_nameof and H5Tenum_valueof functions. Values that do not exists in the enumeration type are supplied to the functions; functions should fail instead of succeeding. Platforms tested: Solaris 2.7 and Linux 2.2.18
* [svn-r5586] Purpose:Quincey Koziol2002-06-112-2/+111
| | | | | | | | | | | | | | | | Bug Fix Description: H5Dcreate and H5Tcommit allow "empty" compound and enumerated types (i.e. ones with no members) to be stored in the file, but this causes an assertion failure and is somewhat vapid. Solution: Check the datatype "makes sense" before using it for H5Dcreate and H5Tcommit. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5567] Purpose:Quincey Koziol2002-06-101-0/+3
| | | | | | | | | | | | | | Bug fix (bug #777) Description: Current code allows a compound datatype to be inserted into itself. Solution: Check if the ID for the member is the same as the ID for the compound datatype and reject it if so. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5560] Purpose:Quincey Koziol2002-06-101-0/+279
| | | | | | | | | | | | | | Bug Fix for bug #789 Description: Creating a 1-D dataset region reference caused the library to hang (go into an infinite loop). Solution: Corrected algorithm for serializing hyperslab regions. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5525] Elena Pourmal2002-06-041-0/+5
| | | | | | | | | | | | | | Purpose: Bug fix (#699), fix provided by a user, approved by Quincey Description: When a scalar dataspace was written to the file and then subsequently queried with the H5Sget_simple_extent_type function, type was reported H5S_SIMPLE instead of H5S_SCALAR. Solution: Applied a fix (see bug report 699) and modified out test program to exercise the case. Platforms tested: Solaris 2.7 and Linux 2.2.18
* [svn-r5502] Purpose:Quincey Koziol2002-06-012-1/+112
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Test Bug Fix Description: Under certain [obscure] circumstances, an object header would get paged out of the metadata cache, and when it was accessed again and brought back into the cache, and immediately had additional metadata added to it (an attribute, usually, or perhaps adding an object to a group), and needed to be extended with a continuation message, but there was no room in any existing object header chunks for the continuation message and an existing object header message needed to be moved to the new object header chunk (I told you it was obscure :-), the object header message moved to the new chunk (not the new metadata being added) would get corrupted. *whew* :-) Solution: Actually copy the "raw" object header message information of the object header message being moved to the new chunk, instead of relying on the "native" object header message information being re-encoded when the object header is flushed. This is because when an object header is paged out of the metadata cache and subsequently brought back in, the "native" information pointer in memory is reset to NULL and only the "raw" information exists. [Actually, this additional testing doesn't trigger the bug, which needs _lots_ of objects to be created and accessed, but it does execise the object header continuation code more than other tests in the library.] Platforms tested: Solaris 2.7 (arabica) & FreeBSD 4.5 (sleipnir)
* [svn-r5491] Purpose:Bill Wendling2002-05-311-23/+74
| | | | | | | | | | | Feature Enhancement Description: We can now set the MPI_Info object to more than one key/value pairing. By setting the HDF5_MPI_INFO environment variable to a semicolon separated list of "key=value" pairs, we can set the MPI_Info variable to them. Platforms tested: Linux
* [svn-r5481] Description:Albert Cheng2002-05-292-5/+5
| | | | | | | Renamed pio_info_g as h5_io_info_g to better reflect its general purpose. Platforms tested: eirene(pp)
* [svn-r5468] Purpose:Quincey Koziol2002-05-282-0/+2
| | | | | | | | | | Code cleanup. Description: Included H5Eprivate.h for a couple of tests which needed it... Platforms tested: IRIX64 6.5 (modi4)
* [svn-r5446] Purpose:Albert Cheng2002-05-212-1/+89
| | | | | | | | | Feature Description: moved the routines of setting up and dumping MPI-info object to test library so that it is avaiable for all tests too. Platforms tested: modi4(pp), eirene (serial)
* [svn-r5444] Purpose:Quincey Koziol2002-05-205-17/+19
| | | | | | | | | | Code cleanup Description: Clean up warnings on IRIX64 6.5 (modi4) Platforms tested: IRIX64 6.5 (modi4)
* [svn-r5313] Pedro Vicente Nunes2002-05-011-7/+236
| | | | | | | | | | | | | | | | Purpose: added more tests to the H5set_extent function Description: there was a bug in the H5S_select_fill call when the fill value was not defined added 2 more set of tests that call H5set_extent without the fill value being defined there are now 4 sets of tests: Test H5Dset_extent with chunks on the raw data cache, with and without fill value Test H5Dset_extent with chunks written to file (b-tree routines), with and without fill value Platforms tested: w2000 linux
* [svn-r5293] Raymond Lu2002-04-302-15/+15
| | | | | | | | | | | | Purpose: Bug Fix Description: Using "grp1", "grp2" variable names conflicts Windows' internal variable definition. Solution: Rename them. Platforms tested: Linux 2.2
* [svn-r5290] Purpose:Quincey Koziol2002-04-301-46/+148
| | | | | | | | | | | | | | Bug Fix Description: Corrected int vs. unsigned short error that only showed up on big-endian machines. Also, add more testing to verify that the coordinates reported for each element iterated through with H5Diterate are correct. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5286] Purpose:Quincey Koziol2002-04-291-31/+71
| | | | | | | | | | | | | | Bug Fix Description: Selection offsets were not being used correctly when iterating through all hyperslabs selections and point selections. Solution: Use the selection offset appropriately. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5278] Purpose:Albert Cheng2002-04-284-101/+101
| | | | | | | | | | | | | | | | | | | | | Migrate from configure macros of XYZ_ABC to H5_XYZ_ABC Description: configure generates many macros definitions on the fly and were stored in src/H5config.h which is included by H5public.h. But other software that uses hdf5 may also run their own configure. There can be a clash in macro name space. We decided awhile ago to prepend all generated macros with "H5_" to avoid conflicts. The process has started and this commit completes it (at least attempt to). Solution: Many macros symbols (e.g. SIZEOF_xxx and HAVE_xxx were changed to H5_SIZEOF_xxx and H5_HAVE_xxx). Then H5private.h no longer includes H5config.h. This cuts H5config.h away from HDF5 source code. Pending issues: The module of fortran and pablo are to be resolved in a different commit. Platforms tested: eirene (parallel), arabica (solaris 7 --enable-fortran, --enable-cxx)
* [svn-r5273] Raymond Lu2002-04-262-3/+395
| | | | | | | | | | | | Purpose: New feature Description: Allow H5Glink and H5Gmove to handle links across different locations. Solution: Added H5Glink2 and H5Gmove2 functions with new parameter of destination location. Platforms tested: Linux 2.2(eirene)
* [svn-r5271] Purpose:Quincey Koziol2002-04-261-1/+1
| | | | | | | | | | | | | | | | Bug Fix. Description: When the fill value for a dataset is not set, the size is set to zero, causing problems with filling unused areas in previously defined chunks (i.e. when the dataset shrinks in size) Solution: Use the size of the elements in the dataset directly, instead of relying on the size of the fill value (which must be the same size). Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5260] Purpose:Quincey Koziol2002-04-251-4/+20
| | | | | | | | | | | | | | | | Code cleanup Description: Previously, the I/O pipeline (pline), external file list (efl) and fill- value (fill) structs were passed down the raw data function call chain, even into and/or through functions which didn't use them. Since all three of these pieces of information are available from the dataset creation property list, just pass the dataset creation property list down the function call chain and query for the information needed in a particular function. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5257] Purpose:Albert Cheng2002-04-251-2/+0
| | | | | | | | | | | | | | | | | | | Bug fix Description: $(LT_RUN) was used to execute ./H5detect in src/Makefile.in. $RUNTEST was set to $(LT_RUN) which was used to execute sequential executable. $(LT_RUN) is "../libtool --mode=execute". But libtool invokes some commands that are not supported in the Tflops machine. That caused failures during the build and check processes. Solution: Upon investigation, there does not seem to be need to use $(LT_RUN) any more. The "libtool --mode=link" now generates a "fake" executable that is actually a command-script file that can regenerate the real executable with dynamic libraries hooks setup properly. Undo all those $LT_RUN substitute and let $RUNSERIAL execute those sequential executables. Platforms tested: Eirene(serial), modi4(parallel)
* [svn-r5245] MuQun Yang2002-04-241-0/+31
| | | | | | | | | | | | | | Purpose: windows support of socket function Description: gethostname is treated as socket function in windows and it is defined at winsock.h. for every windows socket function to be called, it must start with WSAStartup and end with WSACleanup Solution: Add WSAstartup and WSACleanup with WIN32 macro. Platforms tested: windows 2000, confirmed at linux 2.2.18
* [svn-r5219] Purpose:Quincey Koziol2002-04-223-5/+7
| | | | | | | | | | Code cleanup Description: Clean up warnings from gcc 3.1 Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5218] Purpose:Albert Cheng2002-04-222-1/+46
| | | | | | | | | | New feature Description: Added h5_show_hostname to display the hostname of the host in which the process runs. It can help identify location of process in multiple processes or batch launching environments. Platforms tested: Eirene (pp)
* [svn-r5207] Purpose:Albert Cheng2002-04-191-30/+46
| | | | | | | | | | Feature Description: Added option -c to allow skipping file system Checking. This allows users to run the test even if the program thinks it may fill up the file system. Platforms tested: eirene
* [svn-r5205] Purpose:Albert Cheng2002-04-192-2/+2
| | | | | | | | | | | | | | Code cleanup Description: Platform dependent code related to the struct stat and fstat calls polluted source codes. Hard to maintain. Solution: Platform dependent code are moved to H5private.h and then internal code can #include H5private.h. Repeat those macro definition for the stdio and multi drivers since they area examples for writing a virtual file driver. They must not use any internal code. Platforms tested: eirene (parallel), modi4 (serial including gass driver.)
* [svn-r5200] Purpose:Quincey Koziol2002-04-185-17/+25
| | | | | | | | | | Code Cleanup Description: Clean up compiler warnings from the last bunch of checkins Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5191] Purpose:Quincey Koziol2002-04-173-4/+396
| | | | | | | | | | | | | | | | | | | Bug fix Description: When several level deep nested compound & VL datatypes are used, the data in the nested compound datatypes is incorrectly sharing the same "background buffer", causing data corruption when the data is written to the file. Solution: Allocate a separate background buffer for each level of the nested types to convert. (Also allocate temporary background buffers for array datatypes, where this sort of problem could occur also) Added more regression tests to check for these errors. Platforms tested: FreeBSD 4.5 (sleipnir) & Solaris 2.6 (baldric)
* [svn-r5186] Pedro Vicente Nunes2002-04-161-0/+23
| | | | | | | | | | Purpose: added a new file Description: new file that contains the framework for a new test, regarding a new ID to name function. for the moment the program does nothing Platforms tested: w2000
* [svn-r5182] Purpose:Albert Cheng2002-04-141-1/+42
| | | | | | | | Feature Description: Added test to verify H5_MALLOC_WORKS (malloc zero byte) macro Platforms tested: Eirene
* [svn-r5180] Raymond Lu2002-04-121-1/+12
| | | | | | | | | | | | Purpose: Bug Fix Description: Reading fill_old.h5 from fillval.c has problem to find from building directory. Solution: prepend source directory into file name. Platforms tested: Linux 2.2
* [svn-r5177] Pedro Vicente Nunes2002-04-121-1/+1
| | | | | Purpose: added 2 files to remove by set_extent test
* [svn-r5171] Raymond Lu2002-04-113-98/+846
| | | | | | | | | | | | Purpose: New feature Description: Fill-value's behaviors for contiguous dataset have been redefined. Basicly, dataset won't allocate space until it's necessary. Full details are available at http://hdf.ncsa.uiuc.edu/RFC/Fill_Value, at this moment. These two file test backward compatibility with 1.4. Platforms tested: Linux 2.2.
* [svn-r5169] Pedro Vicente Nunes2002-04-111-38/+34
| | | | | | | | | | | | | | | | | | Purpose: test for the H5Dset_extent API function Description: there are 2 types of tests: Test H5Dset_extent with chunks on the raw data cache Test H5Dset_extent with chunks written to file Platforms tested: Windows 2000 SUN( arabica) LINUX (eirene) IRIX64 (modi4)
* [svn-r5167] Pedro Vicente Nunes2002-04-111-21/+13
| | | | | | Purpose: turned temporarely off this test, while the rest of the code is not checked in
* [svn-r5159] Purpose:Bill Wendling2002-04-101-1/+99
| | | | | | Updated Description: Regenerated Dependencies file for addition of set_extent.c file
* [svn-r5158] Purpose:Bill Wendling2002-04-101-5/+5
| | | | | | | Update Description: Changed set_extend to set_extent to reflect the change in the filename...
* [svn-r5154] Pedro Vicente Nunes2002-04-092-164/+320
| | | | | | | Purpose: Renamed the all the functions "set_extend" to "set_extent". Renamed the test file accordingly
* [svn-r5152] Purpose:Quincey Koziol2002-04-091-0/+432
| | | | | | | | | | | | | | | New Feature Description: Added new H5Dfill() routine to fill the elements in a selection for a memory buffer with a fill value. This is a user API wrapper around some internal routines which were needed for the fill-value modifications from Raymond as well as Pedro's code for reducing the size of a chunked dataset. Platforms tested: FreeBSD 4.5 (sleipnir) [and IRIX64 6.5 (modi4) in parallel, in a few minutes]
* [svn-r5147] Raymond Lu2002-04-051-0/+214
| | | | | | | | | | Purpose: New feature Description: Added a query function H5Tget_member_index for compound and enumeration data types, to retrieve member's index by its name. Platforms tested: Linux 2.2
* [svn-r5130] Purpose:Quincey Koziol2002-04-021-2/+120
| | | | | | | | | | | | | | | | | | | | | | Bug Fix & Feature Description: The selection offset was being ignored for optimized hyperslab selection I/O operations. Additionally, I've found that the restrictions on optimized selection I/O operations were too strict and found a way to allow more hyperslabs to use the optimized I/O routines. Solution: Incorporate the selection offset into the selection location when performing optimized I/O operations. Allow optimized I/O on any single hyperslab selection and also allow hyperslab operations on chunked datasets. Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5123] Raymond Lu2002-03-291-1/+74
| | | | | | | | | | | Purpose: Bug fix(#697) Description: Variable-length string wasn't treated as string. Solution: Added character set and padding into VL string type. Platforms tested: FreeBSD
* [svn-r5113] Purpose:Albert Cheng2002-03-281-8/+74
| | | | | | | | | | | | | | | feature Description: Added -fsize <fsize> option which controls the family file size used. This can be used to test the file size limits of a machine or file system. Platforms tested: modi4 (passed even 20GB file size). Eirene (started to fail when 2GB is used. Expected since linux 2.2 does not support large than 2GB file size.) burrwhite (passed up to 4GB. Expected since Linux 2.4 supports larger than 2GB file size.) Then it failed at 4GB and beyond. This is probably a bug in the family file driver.
* [svn-r5111] ./hdf5-devel/test/stab.cRobb Matzke2002-03-281-34/+83
| | | | | Merge of name component length limit bugfix from 1.4 branch. A couple of very minor typos fixed.
* [svn-r5097] Purpose:Quincey Koziol2002-03-272-1/+83
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix Description: Regression test for following bug: The H5Gget_objinfo() function was not setting the 'fileno' field in the H5G_stat_t struct passed in. Solution: Added a "file serial number" to each file currently open in the library and put that in the 'fileno' field. If a file is opened twice (with H5Fopen) and the VFL driver detects that it is the same file (i.e. the two file structures have the same "shared file info" in the library's memory structures), they will have the same serial number. This serial number has two drawbacks: - If a VFL driver doesn't/can't detect that two calls to H5Fopen with the same file actually _are_ the same file, each will get a different serial number - If the same file is closed and re-opened, the serial number will be different. It is be possible to fix the second drawback for many VFL drivers, but it would be a lot of effort and probably isn't worth it until we've got a good reason to do it. Dunno if we'll ever be able to fix the first drawback... Platforms tested: FreeBSD 4.5 (sleipnir) VS: ----------------------------------------------------------------------
* [svn-r5083] Purpose:Quincey Koziol2002-03-261-6/+145
| | | | | | | | | | | | | | | | | | | Bug Fix Description: Regression test for following bug: When reading a contiguous hyperslab that spanned the entire dataset and was larger that the type conversion buffer, the hyperslab routines need to fill the type conversion buffer and then return to the I/O routines. When the I/O routines resume the hyperslab operation, it was possible to have a combination of coordinates which caused the hyperslab iterator to incorrectly advance in the file, causing some data to be re-read or re-written. Platforms tested: Linux (eirene)
* [svn-r5065] Pedro Vicente Nunes2002-03-141-37/+33
| | | | | | | | | Purpose: test the H5Dset_extend function Description: changed the example for more easy debugging Platforms tested: w2000, linux
* [svn-r4978] Purpose:Quincey Koziol2002-02-177-16/+6
| | | | | | | | Code cleanup Description: Cleanup compiler warnings found by the SGI compiler and gcc 3.0 Platforms tested: FreeBSD 4.5 w/gcc 3.0 (hack) && IRIX64 (modi4)
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