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* [svn-r10176] Purpose:Quincey Koziol2005-03-101-0/+248
| | | | | | | | | | | New feature Description: Add routine to delete entire B-tree from a file. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10173] Purpose:Quincey Koziol2005-03-091-16/+0
| | | | | | | | | | | Code cleanup Description: Remove some extraneous ifdef's Platforms tested: FreeBSD 4.11 (sleipnir) Too minor for other testing
* [svn-r10172] Purpose:Quincey Koziol2005-03-091-2/+208
| | | | | | | | | | | | | | Bug fix & New feature Description: Correct some situations where a write lock on the data in the metadata cache was requested, but only a read lock is necessary. Add routine to find nearest neighbor record < or > to a query key. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10168] Purpose:Quincey Koziol2005-03-081-0/+262
| | | | | | | | | | | | Bug fix & new tests Description: Fix another couple of issues with record removal and add some more tests to make certain removals work correctly. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10163] Purpose: New way to do conversion test from integers to ↵Raymond Lu2005-03-081-36/+64
| | | | | | | | | | | | | floating numbers. Description: This is the 2nd step of changing conversion test. This checkin is only for conversion from integer to floating number. The source buffer of integer is filled up in the same way described in the last checkin(revision 1.153). Platforms tested: fuss, sol, and heping - copper was down. Couldn't do h5committest.
* [svn-r10162] Purpose:Quincey Koziol2005-03-081-2/+901
| | | | | | | | | | | | | Bug fix & new tests Description: Fix several errors in record removel routines, which should now be feature complete for removing records at any location in the B-tree (further testing will verify this) Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10159] Purpose:Quincey Koziol2005-03-071-3/+210
| | | | | | | | | | | | Bug fix Description: Corrected errors in record removal code to handle removing records in higher nodes in the B-tree. Platforms tested: FreebSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10158] Purpose:James Laird2005-03-071-393/+428
| | | | | | | | | | | | | | | | | | | | | | Automake version upgrade Description: Upgraded automake version from 1.6.2 to 1.9.5. Changed bin/reconfigure script to use automake 1.9.5. Changed configure.in and Makefiles to use new FCFLAGS and FC variables instead of FFLAGS and F9X. Automake and configure should now do the lion's share of the work supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will be cleaned later). Altered how configure handles pmake; now root-level Makefile.in is processed by bin/reconfigure to have a .MAKEFLAGS target, since automake no longer allows us to define unused variables. Configure now always checks for C++ compiler even if it is not used, since automake thinks this is the Right Thing To Do and will break otherwise. Platforms tested: Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
* [svn-r10156] Purpose:Quincey Koziol2005-03-051-1/+118
| | | | | | | | | | | Bug fix & new feature Description: Allow B-tree's height to be reduced when removing records. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10155] Purpose:Quincey Koziol2005-03-051-10/+288
| | | | | | | | | | | | More tests Description: Add tests for removing records in the root of a level-1 B-tree and promoting and merging leaf nodes. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10154] Purpose:Quincey Koziol2005-03-051-0/+278
| | | | | | | | | | | | | | Bug fix/new feature Description: Tweak the record promotion algorithm to get it working correctly when promoting and redistributing records. Added tests for that case. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10153] Purpose:Quincey Koziol2005-03-051-0/+163
| | | | | | | | | | | | New feature Description: Allow records in internal nodes to be removed, not just records in leaf nodes. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10152] Purpose:Quincey Koziol2005-03-051-0/+117
| | | | | | | | | | | | | | | | | | Bug fix & new feature Description: Fix error in 3-node redistribution when nodes are only moving into the middle node from the left & right nodes (which happens sometimes during record removals). Clean up internal insert & remove routines to remove lots of redundant checking. Added 3->2 node merge routine to handle more record removal cases. Platforms tested: FreeBSD 4.9 (sleipnir) Solaris 2.11 (shanti)
* [svn-r10151] Purpose:Quincey Koziol2005-03-041-2/+156
| | | | | | | | | | | New feature Description: Add code to handle 2->1 node merges during record removal. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10150] Purpose: A new way to do conversion testRaymond Lu2005-03-041-14/+81
| | | | | | | | | | | | | | | | | Description: This is the first step of changing conversion test. This checkin is only for conversion between integers. Instead of filling source buffer with randomly generated bit pattern, this new way uses more sensible bit patterns. It's easier to see using "char" as source for example. The bit patterns will be 00000001, 00000010, 00000100, 00001000, 00010000, 00100000, 01000000, 10000000 00000000, 00000011, 00000111, 00001111, 00011111, 00111111, 01111111, 11111111 11111111, 11111110, 11111100, 11111000, 11110000, 11100000, 11000000, 10000000 The main point of this way is to avoid casting and comparison between source and destination types by compiler. The bit patterns will cover positive maximum and minimum, negative maximum and minimum if the source is signed integer. Platforms tested: h5committest and fuss.
* [svn-r10149] Purpose:Quincey Koziol2005-03-041-0/+170
| | | | | | | | | | | | | | | | | Bug fix & new feature Description: Fix a couple of off-by-one errors in assertions (code was actually correct) for 3 node redistributions. Remove "old" node removal code that is unused now. Add more tests that verify that 2-node and 3-node redistributions are working correctly for removals. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10148] Purpose:Quincey Koziol2005-03-041-4/+42
| | | | | | | | | | | | New test Description: Add a couple more tests for removing records before I start modifying the code further. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10135] Purpose:Quincey Koziol2005-03-031-1/+348
| | | | | | | | | | | | | | | Bug fix & new feature Description: Fix problem with inserting existing keys into B-tree corrupting record counts along the path to the failed insertion. Add more support for removing records, it's now handling removing records from leaves of level-1 B-trees. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti)
* [svn-r10130] Purpose:Albert Cheng2005-03-035-620/+29
| | | | | | | Retired GASS driver. Platforms tested: H5committested.
* [svn-r10129] Corrected typos which should have said SRB instead of GASS.Albert Cheng2005-03-031-2/+2
| | | | NOt tested since there is no SRB server to test with.
* [svn-r10123] Purpose:Albert Cheng2005-03-021-3/+0
| | | | | | | | | | | | | | | | | | | | | | | Removed GASS configuration and software packages associated with it. The following software are no longer configurable. checking for main in -lcrypto... yes checking for SSL_get_version in -lssl... yes checking globus_common.h usability... yes checking globus_common.h presence... yes checking for globus_common.h... yes checking for globus_module_activate in -lglobus_common... yes checking for main in -lglobus_gass_cache... yes checking for main in -lglobus_gaa... yes checking for main in -lglobus_gss... yes checking for main in -lglobus_gss_assist... yes checking for main in -lglobus_io... yes checking for main in -lglobus_gass_transfer_assist... yes checking for main in -lglobus_gass_transfer... yes checking for globus_gass_open in -lglobus_gass_file... yes Platforms tested: h5committested (but copper was down.) tested in modi4 too.
* [svn-r10094] Purpose:Quincey Koziol2005-02-261-1/+165
| | | | | | | | | | | | | | | New features & refactor Description: Add basic record removal (only handles level-0 B-trees currently) Add query routine to check the number of records in a B-tree Add debugging routine to check the address of the root node in the B-tree Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10087] Purpose: New feature and testRaymond Lu2005-02-251-1/+7
| | | | | | | | | | | Description: Somehow, the hardware conversions between "long double" and other native floating-point types were left out. Solution: Added the hardware conversion functions in H5Tconv.c and test cases in dtypes.c. Platforms tested: h5committest and fuss. Misc. update: updated MANIFEST to replace bin/reconfigure.sh with bin/reconfigure
* [svn-r10081] Purpose: Some Kind of VerificationRaymond Lu2005-02-242-4/+5
| | | | | | | | | | | | | | | | | | Description: The library didn't handle incorrect hardware conversion for datatype. It simply did convert to incorrect data if any hardware didn't handle correctly. Solution: During configuration, incorrect hardware conversion is detected and some macros are defined. Use these macros to decide whether to register hardware conversion in H5T.c. If no hardware conversion function is registered for certain pair of datatypes, software conversion function will be used as the conversion path. Although slower than hardware conversion, we're more confident software conversion is accurate. So in one sentence to describe library's behavior, if some hardware conversion doesn't work well, software conversion will be used instead. Platforms tested: h5committest and fuss. Misc. update: some changes to configure's comments.
* [svn-r10078] Purpose:Quincey Koziol2005-02-241-3/+98
| | | | | | | | | | | | | Bug fix & new feature Description: Fix errors in tracking the total number of records "below" a node. Add feature to find the n'th record in a B-tree Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10077] Purpose:Quincey Koziol2005-02-241-1/+121
| | | | | | | | | | | | | New feature, refactor code Description: Add call to search for a record in a B-tree by key value Refactored some of the existing callbacks to simplify them. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10071] Purpose:Quincey Koziol2005-02-231-4/+130
| | | | | | | | | | | | | | Bug fixes Description: Fix several bugs in B-tree insertion code, which now appears to be fully functional. (Tested to 1,280,000 records at least...) Add random record insertion test to shake out boundary conditions, etc. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10066] Purpose:James Laird2005-02-231-0/+4
| | | | | | | | | | Libtool upgrade Description: HDF5 was using libtool 1.4.2. Upgraded to libtool 1.5.14. Platforms tested: verbena, heping, pommier, copper, modi4, arabica
* [svn-r10047] Purpose:Quincey Koziol2005-02-191-1/+105
| | | | | | | | | | | | New feature Description: Allow internal nodes to perform 3->4 splits. Inserting records should now be feature complete. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10046] Purpose:Quincey Koziol2005-02-191-0/+104
| | | | | | | | | | | New feature Description: Allow 3 node redistributions to work on internal nodes. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10045] Purpose:Quincey Koziol2005-02-191-17/+123
| | | | | | | | | | | New feature Description: Allow internal nodes in v2 B-tree to undergo 2->3 splits Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10044] Purpose:Quincey Koziol2005-02-181-1/+107
| | | | | | | | | | | New feature Description: Allow internal nodes in v2 B-tree to perform 2 node redistribution Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10038] Purpose:Quincey Koziol2005-02-171-18/+146
| | | | | | | | | | | New test Description: Add tests for splitting leaves in level-2 B-tree Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10036] Purpose:Quincey Koziol2005-02-171-3/+166
| | | | | | | | | | | New test Description: Add more regression tests for redistributing leafs in a level-2 B-tree Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10034] Purpose:Quincey Koziol2005-02-171-0/+29
| | | | | | | | | | | New test Description: Add extra tests for v2 B-tree iterator Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r10026] Purpose:Xiaowen Wu2005-02-171-1/+130
| | | | | | | | | | | | | | | New feature. Description: Add a test case for scaleoffset filter (integer type). For debugging purpose only. The test case is not turned on. Solution: Platforms tested: heping, copper, arabica Misc. update:
* [svn-r10025] Purpose:Xiaowen Wu2005-02-171-0/+1
| | | | | | | | | | | | | | New feature. Description: Add the scaleoffset internal library filter. Solution: Platforms tested: heping, copper, arabica Misc. update:
* [svn-r10020] Purpose:Quincey Koziol2005-02-171-1/+51
| | | | | | | | | | | New feature Description: Add code to iterate over all the records in a v2 B-tree. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10016] James Laird2005-02-161-1/+0
| | | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: modi4 dies during build with strange errors. The root cause of these is a two-year-old hack in HDF5's libtool script that only takes effect on IRIX. Solution: Edited the libtool hack (by editing ltmain.sh) to correct a bug in the hack. Also made sure that compiler-specific DEFAULT_LIBS are used when linking. Platforms tested: sleipnir, copper, modi4, sol
* [svn-r9995] Purpose:Quincey Koziol2005-02-111-1/+77
| | | | | | | | | | | | | | New feature & bug fix Description: Allow root node to split, forming a level 2 B-tree Fix error where wrong record was being copied up to parent node for a 2 node redistribution on the "right" side of the B-tree. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti)
* [svn-r9993] Purpose:James Laird2005-02-112-2/+2
| | | | | | | | | | | | | | | | | | | | Bug fix Description: Arabica exhibited strange errors when linker found wrong versions of header files. This happened because include directories were given to linker in the wrong order. Solution: Move include directories from AM_CFLAGS variable to INCLUDES variable to put them before CPPFLAGS variable. Trust me, it works. This bug may also have contributed to strange errors on other platforms (kelgia?). Platforms tested: copper, sleipnir, arabica. (h5dump broke while building on arabica, but this happened in a clean checkout, too).
* [svn-r9988] Purpose:James Laird2005-02-111-15/+4
| | | | | | | | | | | | | | | | | | | | Bug fix Description: pmake (on modi4, for instance) complains about undefined variables if it is run without the -V flag, which turns those errors to warnings. Solution: Added test to configure.in to see if $MAKE will allow Makefiles with undefined variables. If not, sets -V flag in AM_MAKEFLAGS. Ensured that all custom make targets use AM_MAKEFLAGS. Also defined all variables that caused errors in top-level Makefile.am. This means that pmake can be used to build hdf5 *from the top level only*. To run make from a subdirectory, still need to use -V flag (or use make or gmake). Platforms tested: modi4, heping, copper, sleipnir
* [svn-r9987] Purpose: bug fixRaymond Lu2005-02-111-6/+10
| | | | | | | | | | | Description: For hardware conversion from integers to "long double" on AMD machine, the test failed because the size of "long double"(can be 16 bytes) is bigger than the precision(80 bits). There can be some garbage in the unused bytes in "long double". That caused failure during byte comparison. Solution: Clean these unused bytes before comparison. Platforms tested: mir and fuss; simple change
* [svn-r9986] Purpose:Quincey Koziol2005-02-111-2/+182
| | | | | | | | | | | | | | | | | | | New feature & code cleanup Description: Change some references from 'keys' to 'records', which is more correct for this implementation. Added feature to allow preemptive 3 node record redistributions (for leaves only currently) Added feature to perform preemptive 3->4 node splits (for leaves only currently) Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti) w/purify Too minor to require h5committest
* [svn-r9985] Purpose:Quincey Koziol2005-02-111-0/+124
| | | | | | | | | | | | | | | | | New feature & bug fixes Description: Checkpoint v2 B-tree code after getting preemptive 2->3 node splitting working (for leaf nodes only at the moment, however). Also, correct a problem with redistributing records that was probably causing the failures on mir in yesterday's daily tests. Ran code through purify on shanti and cleared up some warnings. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti) w/purify
* [svn-r9984] Purpose: New feature and testRaymond Lu2005-02-101-60/+65
| | | | | | | | | | Description: Added support of hardware conversion between "long double" and integers(mainly in H5Tconv.c) and some test cases(mainly in test/dtypes.c). Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r9971] Purpose:Quincey Koziol2005-02-091-6/+39
| | | | | | | | | | | | New feature Description: Checkpoint v2 B-tree code after getting 2 leaf record redistribution working and tested. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r9966] Purpose: Bug fixRaymond Lu2005-02-091-8/+49
| | | | | | | | | | | | | Description: H5Tget_member_value didn't return correct value if called after H5Tenum_valueof. It's because there's a sorting on the members of enum type in H5Tenum_valueof which changed the order of members. Solution: Made a copy of original type and do sorting on it to protect the original order. Platforms tested: fuss; tested v1.6 with h5committest Misc. update: RELEASE.txt
* [svn-r9962] Purpose:Quincey Koziol2005-02-081-0/+91
| | | | | | | | | | | | | | | Bug fix & code update Description: Fix error in new free-list factory routines that was causing errors on tungsten, et al. Also, checkpoint v2 B-tree code. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Linux 2.4 (tungsten) Otherwise too minor to require h5committest
* [svn-r9959] Purpose: Bug fixRaymond Lu2005-02-081-25/+124
| | | | | | | | | | | | Description: For variable-length string, H5Tget_class returned H5T_STRING as its class. But H5Tdetect_class and H5Tget_member_class considered it as H5T_VLEN. This is fixed to let all these 3 functions treat it as H5T_STRING. Some test cases have been added to dtypes.c Platforms tested: heping - already tested for v1.6 with h5committest Misc. update: RELEASE.txt
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