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* Warnings fixes (#1680)jhendersonHDF2022-04-251-2/+2
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* Implement support for big I/O for independent reads (#1446)Neil Fortner2022-02-181-7/+30
| | | | | | | | | | * Implement big I/O support for independent reads. Add test for this. * Committing clang-format changes * Update big I/O code in H5FD__mpio_write() to match that in H5FD__mpio_read(). Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Fixed Spelling Errors (#1166)Scot Breitenfeld2021-12-071-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * fixed missed closing of a dataset * fixed missed closing of a dataset * fixed typo in error return * Committing clang-format changes * minor edits * code format * Committing clang-format changes * code format * minor edit * switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging * Committing clang-format changes * changed size_i in printf to reflect the I/O. * Committing clang-format changes * Fixed seg fault with xlf on BE with -qintsize=8 * fixed error function string * spelling corrections via codespell, added new spell check github actions * Committing clang-format changes * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * work around for https://github.com/codespell-project/codespell/issues/2137 * misc * added missing file * misc * misc. * misc * switch to using Codespell with GitHub Actions * misc. * misc. * fixed more sp errors * Fix new typos found by codespell. * fixed proceed with precede * fixed variable in fortran test * fixed minnum * updated spelling list Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Fixes parallel issues from recent C99 changes (#809)Dana Robinson2021-06-301-2/+2
| | | | | | | * Fixes parallel issues from recent C99 changes * Adds MPE FUNC --> __func__ changes missed in earlier PRs * Even more missed FUNC --> __func__ macros
* Align with "parallel fence" changes (#479)Quincey Koziol2021-03-241-81/+14
| | | | | | | | | * Small code updates and simplifications * Committing clang-format changes * Fix 'make installcheck' for parallel builds Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Clang-format of source filesAllen Byrne2020-09-301-920/+881
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* Fix some HDfprintf compilation errors: use the right format stringsDavid Young2020-09-241-13/+22
| | | | | ("zu", PRIuHSIZE), avoid casting some printf arguments, pass the right number of arguments.
* testpar/t_2Gio.c: Fix a typo that I think was introduced by aDavid Young2020-01-291-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | previous warnings PR. An array element was assigned to itself---shape[2]Â =Â shape[2];---instead of being assigned to chunk[2]. fortran/src/H5Pf.c: move conditional compilation controlled by H5_NO_DEPRECATED_SYMBOLS outside of a function for readability. fortran/src/H5match_types.c: put a variable's declaration under the same conditional compilation (H5_FORTRAN_HAVE_C_LONG_DOUBLE) as its use. For now, skip compilation of some unused debug dump routines in the JNI. While I'm in the JNI, delete a set-but-unused variable. src/H5Z.c: condition a variable declaration on H5_NO_DEPRECATED_SYMBOLS so that it's not declared but unused or vice versa. test/cache_common.h: add an #include in to get some symbols we need to avoid implicit declaration warnings. test/dsets.c: use a more conventional conditional-compilation syntax. test/dt_arith.c, test/fillval.c: initialize a bunch of uninitialized variables before use. test/vfd.c: pass the expected type of `void **` to posix_memalign(3) instead of `int **`. testpar/t_bigio.c: explicitly compare with 0 instead of using ! when "equal to 0?" is the question not "is false?" Repair some indentation while I'm here. testpar/testpar.h: repair misaligned line-continuation backslashes in a macro that probably should be a function so that we don't have to fiddle with the line continuation to begin with. tools/src/h5repack/h5repack_main.c: fix some compiler fussing about enums. tools/test/perform/pio_engine.c: the compiler fusses if you cast a function call returning double directly to off_t. It's ok if you cast a variable that's a double to off_t, however. Write and use a new function, sqrto(), to avoid the cast warnings.
* rename macrokmu2020-01-281-2/+2
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* pick up from Dave's fixkmu2020-01-271-239/+239
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* leave Wswitch-default for later fixkmu2020-01-271-25/+13
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* fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, ↵kmu2020-01-271-17/+28
| | | | Wsign-compare, Wmisleading-indentation, Wshadow
* squash cast warning fixkmu2020-01-231-31/+31
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* remove unsed var,function,macro, etckmu2019-12-061-1/+0
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* Removed set_bigio_count prototype since it has been added to H5private.hRichard Warren2019-10-251-2/+0
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* Change API names for get/set bitio_count. Also added H5_mpi_set_bigio_count ↵Richard Warren2019-10-231-2/+2
| | | | to H5private.h.
* Remove debugging logic from the new t_bigio testRichard Warren2019-10-081-18/+0
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* Expanded t_bigio.c to include Jordan's test from HDFFV-10539Richard Warren2019-10-081-3/+82
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* At the suggestion of the PR reviewers, moved the mpio_create_large_type to ↵Richard Warren2019-10-071-18/+14
| | | | H5mpi.c and renamed the function appropriately. Also moved some support functions to set and get the vvalue where we transistion to using derived datatypes.
* OESS-29 Update HD prefix mostlyAllen Byrne2019-08-241-264/+264
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* HDFFV-10625 -- Implemented a process-0 read and then broadcast for ↵Quincey Koziol2019-01-071-2/+2
| | | | collective read of full (HS_ALL), contiguous, atomic datasets by all the processes in the file communicator.
* Unify the test (t_bigio.c) between hdf5_1_10 and developRichard Warren2018-03-121-316/+79
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* Add commentary around calling H5Screate_simple with a single elementRichard Warren2017-08-291-7/+25
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* Fix the t_bigio test so that it runs on 32bit machinesRichard Warren2017-08-151-5/+7
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* Fix up the ExpressMode check for skipping slow running tests.Richard Warren2017-07-101-1/+1
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* Include code fixes and additional modifications pointed out by code reviewersRichard Warren2017-07-101-8/+64
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* Commit changes needed for pull requestRichard Warren2017-07-051-0/+2097