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* Strip HD prefix from string/char C API calls (#3540)Dana Robinson2023-09-151-8/+7
| | | | | | | | | | | | | | | | | | | | | * Strip HD prefix from string/char C API calls * HD(f)(put|get)(s|c) * HDstr* * HDv*printf * HD(s)(print|scan)f * HDperror But NOT: * HDstrcase* * HDvasprintf * HDstrtok_r * HDstrndup As those are not C99 and have portability work-around implementations. They will be handled later. * Fix th5_system.c screwup
* Consistent initialization of hid_t in the tests (#3521)Scot Breitenfeld2023-09-081-8/+8
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* Convert hbool_t --> bool in testpar (#3495)Dana Robinson2023-09-051-424/+424
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* chore: fix grammar - get hang -> get hung (#3272)H. Joe Lee2023-07-241-1/+1
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* Remove HD from HDmem* calls (#3211)Dana Robinson2023-06-291-2/+2
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* Remove programmer/date from comments (#3210)Dana Robinson2023-06-291-149/+0
| | | | * Removes Programmer: and Date: fields * Fixes a few Modifications: fields leftover from previous work
* Remove HD from C std lib file ops (#3206)Dana Robinson2023-06-291-4/+4
| | | | | | | | | * HDfclose * HDferror * HDfeof * HDfflush * HDfopen * HDfread * HDfwrite
* Remove HD from memory allocate/free calls (#3195)Dana Robinson2023-06-281-5/+5
| | | | | | * HDcalloc * HDfree * HDmalloc * HDrealloc
* Rename HD(f)printf() to (f)printf() (#3194)Dana Robinson2023-06-281-338/+335
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* Rename HDassert() to assert() (#3191)Dana Robinson2023-06-281-213/+213
| | | | | * Change HDassert to assert * Fix bin/make_err
* Remove unnecessary fields from cache structs (#2951)Quincey Koziol2023-05-151-21/+2
| | | | | | | | | | | | * Remove unnecessary 'magic' field from cache structs Signed-off-by: Quincey Koziol <quincey@koziol.cc> * Committing clang-format changes --------- Signed-off-by: Quincey Koziol <quincey@koziol.cc> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Comment cleanup (#2689)Quincey Koziol2023-04-111-54/+0
| | | * Clean up content and redundant logging in comments.
* Removes MPE instrumentation support. (#2245)Dana Robinson2022-11-091-10/+0
| | | | | | | | | | | * Removes MPE instrumentation support. The Autotools will no longer accept --with-mpe= and the logging commands have been removed from the FUNC_ENTER macros. CMake has never supported instrumenting for MPE. * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Update copyright headers (#2184)Larry Knox2022-11-011-1/+0
| | | | | * Updated source file copyright headers to remove "Copyright by the Board of Trustees of the University of Illinois", which is kept in the top-level COPYING file.
* Fix typos found in the rest of the hdf5 code-base (#1985)luzpaz2022-08-101-1/+1
| | | | | | | | | | | * Fix typos found in the rest of the hdf5 code-base * Typo in tool.cmake * Revert "Typo in tool.cmake" This reverts commit 06b8403d99757c7d20f1eed530cf317c3d84de4b. * Fix clang-format styling
* Develop clang 13 format (#1933)Allen Byrne2022-07-261-23/+23
| | | | | * Update format source to clang 13 * More format changes
* Fixes a bug where t_cache fails due to a string size being too small (#1720)Dana Robinson2022-05-041-4/+6
| | | | | | | | | * Fixes a bug where t_cache fails due to a string size being too small Recent warning reductions led to an incorrect string size being passed to h5_fileaccess, causing the test to silently fail. In addition to fixing the bug, the test will now fail noisily on setup failures. * Updates the t_cache test to fail noisily on setup errors
* Fix some const cast and stack/static object size warnings (#1700)jhendersonHDF2022-05-011-6/+28
| | | | | | | | | * Fix various warnings * Move HDfree_const to H5private.h for wider use * Print output from all ranks in parallel tests on allocation failure * Move const pointer freeing macro to h5test.h for now
* free MPI_Group/MPI_Comm/MPI_Datatype objects (#1638)Wei-keng Liao2022-04-151-3/+16
| | | | | * free MPI_Group/MPI_Comm/MPI_Datatype objects * fix clang-format style
* spelling fixes (#1561)Scot Breitenfeld2022-03-311-2/+2
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* Unify handling of collective metadata reads status (#1206)jhendersonHDF2022-01-291-11/+29
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* Snprintf2 (#1399)Sean McBride2022-01-281-1/+1
| | | | | | | | | | | | | * Replaced many uses of sprintf with safer snprintf Many very straightforward, but in a few cases added a length parameter to some private functions, because buffer length was otherwise unknowable. * Removed unnecessary use of static on small buffers This improves thread safety. * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Fixed Spelling Errors (#1166)Scot Breitenfeld2021-12-071-16/+16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * fixed missed closing of a dataset * fixed missed closing of a dataset * fixed typo in error return * Committing clang-format changes * minor edits * code format * Committing clang-format changes * code format * minor edit * switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging * Committing clang-format changes * changed size_i in printf to reflect the I/O. * Committing clang-format changes * Fixed seg fault with xlf on BE with -qintsize=8 * fixed error function string * spelling corrections via codespell, added new spell check github actions * Committing clang-format changes * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * work around for https://github.com/codespell-project/codespell/issues/2137 * misc * added missing file * misc * misc. * misc * switch to using Codespell with GitHub Actions * misc. * misc. * fixed more sp errors * Fix new typos found by codespell. * fixed proceed with precede * fixed variable in fortran test * fixed minnum * updated spelling list Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Fixes parallel issues from recent C99 changes (#809)Dana Robinson2021-06-301-209/+216
| | | | | | | * Fixes parallel issues from recent C99 changes * Adds MPE FUNC --> __func__ changes missed in earlier PRs * Even more missed FUNC --> __func__ macros
* Align with "parallel fence" changes (#479)Quincey Koziol2021-03-241-37/+13
| | | | | | | | | * Small code updates and simplifications * Committing clang-format changes * Fix 'make installcheck' for parallel builds Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Update license url part2 (#333)Larry Knox2021-02-171-1/+1
| | | | | | * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test.
* develop revert source to clang-format version 11 (#293)Allen Byrne2021-01-291-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 convert plugin option to FetchContent, add tests * Fixes for pkcfg files because of plugin option * OESS-98 fix tools test for plugins * Keep doxygen comments under 100 chars long - format hint * Whitespace * HDFFV-11144 - Reclassify CMake messages * HDFFV-11099/11100 added help text * Reworked switch statement to compare string instead * Fix typo * Update CDash mode * Correct name of threadsafe * Correct option name * Undo accidental commit * Note LLVM 10 to 11 format default changes * Update format plugin * Undo clang-format version 11 changes * One more correction
* Add flag to H5CX_pop that allow setting the properties to return to ↵Quincey Koziol2020-12-011-1/+1
| | | | application to be skipped. (#134)
* Basic alignment with async branch (#115)Quincey Koziol2020-11-231-2/+2
| | | | | | | * Basic alignment with async branch - trivial changes to reduce clutter in overall diff. * Update minor error code to reflect change within library * Update the error output to match library
* Clang-format of source filesAllen Byrne2020-09-301-2872/+2275
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* Repair more format strings.David Young2020-09-261-2/+2
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* Fix a bunch of format string errors reported by Larry.David Young2020-09-251-29/+35
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* Merge pull request #2296 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-01-231-2/+2
|\ | | | | | | | | | | | | | | | | to develop * commit '6486e06545bf637d46e18a787395542f4fca143a': Revert "Moved -Wunsuffixed-float-constants to the developer warnings." Moved -Wunsuffixed-float-constants to the developer warnings. Fixed a bug in testpar/t_cache.c concerning checking expected vs. actual cache entry reads and writes.
| * Merge branch 'develop' into develop_minorDana Robinson2020-01-231-13/+10
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| * | Fixed a bug in testpar/t_cache.c concerning checking expectedDana Robinson2020-01-221-2/+2
| | | | | | | | | | | | vs. actual cache entry reads and writes.
* | | squash cast warning fixkmu2020-01-231-17/+18
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* | merge and fix conflictkmu2020-01-231-10/+7
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| * \ merge and fix conflictkmu2020-01-191-2/+2
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| * | fix unused related warningskmu2020-01-131-9/+5
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| * | remove unsed var,function,macro, etckmu2019-12-061-1/+2
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* | fix uninitizlized warningkmu2020-01-211-3/+3
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* OESS-29 Update HD prefix mostlyAllen Byrne2019-08-241-19/+19
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* Specify the default VOL connector to use with an environment variable.Quincey Koziol2019-03-101-0/+1
| | | | | | | | This implicitly adds support for changing the VOL connector for command-line tools or any application linked with the library. Also, add 'make check-vol' support for all directories, clearing up necessary issues in testing scripts, etc.
* Fix some collective metadata read issuesJordan Henderson2019-02-121-8/+8
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* Squash merge of MDC logging changes.Dana Robinson2018-12-211-251/+212
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* Missed some function renames in error text.Dana Robinson2018-11-271-2/+2
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* Yanked all MPI-1 callsDana Robinson2018-11-271-10/+10
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* VOL FEATUREDana Robinson2018-10-101-1/+1
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* HD prefix and whitespaceAllen Byrne2018-08-281-1/+1
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* Corrections for parallel I/O & tests.Quincey Koziol2018-03-211-0/+6
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