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* Print some messages in parallel tests on MPI rank 0 only (#3785)jhendersonHDF2023-10-281-6/+11
| | | Avoids overly verbose output from all processes emitting progress, etc. info.
* Fix several spelling/grammar issues (#3621)jhendersonHDF2023-10-031-2/+2
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* Consistent initialization of hid_t in the tests (#3521)Scot Breitenfeld2023-09-081-37/+37
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* Convert hbool_t --> bool in testpar (#3495)Dana Robinson2023-09-051-82/+82
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* Removed all the ranks printing out testing information (#3457)Scot Breitenfeld2023-09-011-0/+2
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* chore: fix typo - persent -> present (#3273)H. Joe Lee2023-07-251-1/+1
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* chore: fix grammar - get hang -> get hung (#3272)H. Joe Lee2023-07-241-1/+1
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* Remove HD from HDmem* calls (#3211)Dana Robinson2023-06-291-15/+15
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* Remove programmer/date from comments (#3210)Dana Robinson2023-06-291-28/+0
| | | | * Removes Programmer: and Date: fields * Fixes a few Modifications: fields leftover from previous work
* Remove HD from memory allocate/free calls (#3195)Dana Robinson2023-06-281-18/+18
| | | | | | * HDcalloc * HDfree * HDmalloc * HDrealloc
* Rename HD(f)printf() to (f)printf() (#3194)Dana Robinson2023-06-281-185/+184
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* Rename HDassert() to assert() (#3191)Dana Robinson2023-06-281-61/+61
| | | | | * Change HDassert to assert * Fix bin/make_err
* Synchronize HDF5 tests with VOL tests (#2628)jhendersonHDF2023-04-031-1/+2
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* Fix typos found in the rest of the hdf5 code-base (#1985)luzpaz2022-08-101-6/+6
| | | | | | | | | | | * Fix typos found in the rest of the hdf5 code-base * Typo in tool.cmake * Revert "Typo in tool.cmake" This reverts commit 06b8403d99757c7d20f1eed530cf317c3d84de4b. * Fix clang-format styling
* Develop clang 13 format (#1933)Allen Byrne2022-07-261-43/+51
| | | | | * Update format source to clang 13 * More format changes
* Fix some const cast and stack/static object size warnings (#1700)jhendersonHDF2022-05-011-2/+15
| | | | | | | | | * Fix various warnings * Move HDfree_const to H5private.h for wider use * Print output from all ranks in parallel tests on allocation failure * Move const pointer freeing macro to h5test.h for now
* Fixed Spelling Errors (#1166)Scot Breitenfeld2021-12-071-32/+32
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * fixed missed closing of a dataset * fixed missed closing of a dataset * fixed typo in error return * Committing clang-format changes * minor edits * code format * Committing clang-format changes * code format * minor edit * switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging * Committing clang-format changes * changed size_i in printf to reflect the I/O. * Committing clang-format changes * Fixed seg fault with xlf on BE with -qintsize=8 * fixed error function string * spelling corrections via codespell, added new spell check github actions * Committing clang-format changes * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * work around for https://github.com/codespell-project/codespell/issues/2137 * misc * added missing file * misc * misc. * misc * switch to using Codespell with GitHub Actions * misc. * misc. * fixed more sp errors * Fix new typos found by codespell. * fixed proceed with precede * fixed variable in fortran test * fixed minnum * updated spelling list Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Update license url part2 (#333)Larry Knox2021-02-171-1/+1
| | | | | | * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test.
* Ensure processes always synchronize in t_shapesame test setup (#306)jhendersonHDF2021-02-031-16/+6
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* develop revert source to clang-format version 11 (#293)Allen Byrne2021-01-291-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 convert plugin option to FetchContent, add tests * Fixes for pkcfg files because of plugin option * OESS-98 fix tools test for plugins * Keep doxygen comments under 100 chars long - format hint * Whitespace * HDFFV-11144 - Reclassify CMake messages * HDFFV-11099/11100 added help text * Reworked switch statement to compare string instead * Fix typo * Update CDash mode * Correct name of threadsafe * Correct option name * Undo accidental commit * Note LLVM 10 to 11 format default changes * Update format plugin * Undo clang-format version 11 changes * One more correction
* Basic alignment with async branch (#115)Quincey Koziol2020-11-231-1/+1
| | | | | | | * Basic alignment with async branch - trivial changes to reduce clutter in overall diff. * Update minor error code to reflect change within library * Update the error output to match library
* Clang-format of source filesAllen Byrne2020-09-301-1978/+1331
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* Fix a bunch of format string errors reported by Larry.David Young2020-09-251-3/+3
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* fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, ↵kmu2020-01-271-6/+1
| | | | Wsign-compare, Wmisleading-indentation, Wshadow
* more fix and address commentskmu2019-12-091-15/+0
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* OESS-29 Update HD prefix mostlyAllen Byrne2019-08-241-27/+27
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* Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, alongQuincey Koziol2019-07-301-162/+63
| | | | with tests and minor cleanups and refactorings.
* Align develop with incoming hyperslab_updates branch changes.Quincey Koziol2019-02-131-16/+16
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-03-181-854/+852
|\ | | | | | | | | | | merge_func_enter_vol Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
| * Cleanup overuse of include filesAllen Byrne2018-02-141-854/+852
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* | Add API context interface and use it throughout the library.Quincey Koziol2018-03-151-1/+1
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* fixed missing prototype warningM. Scot Breitenfeld2017-10-091-1/+1
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* removed always true ifdefM. Scot Breitenfeld2017-10-091-2/+0
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* [svn-r30201] Description:Quincey Koziol2016-07-181-0/+6
| | | | | | | | | Switch test framework to dynamically allocate the testing array, and expand the length of the description field. Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30189] Description:Quincey Koziol2016-07-181-8/+8
| | | | | | | | | Clean up more warnings: drop the warning count from ~1310 down to ~940, with only 31 types of warnings in 148 files (down from 38 types in 167 files). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30075] Description:Quincey Koziol2016-06-141-1/+1
| | | | | | | | | | Bring object/dataset/group/named datatype features from revise_chunks branch to trunk. Also CMake support for h5format_convert and a bunch of misc. cleanups. Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29880] Add HD to sleep function callsAllen Byrne2016-05-041-1/+1
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* [svn-r29079] rename the coll read requirement function.Mohamad Chaarawi2016-02-101-1/+1
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* [svn-r29077] Description:Quincey Koziol2016-02-101-2/+2
| | | | | | | | Normalize against the trunk, in preparation for final merge. Tested on: MacOSX/64 10.11.3 (amazon) w/serial & parallel (h5committest not required on this branch)
* [svn-r28649] - add new API to toggle collective metadata write.Mohamad Chaarawi2015-12-141-1/+3
| | | | | - set default to FALSE - fix some bugs.
* [svn-r27929] merge from trunk.Mohamad Chaarawi2015-10-011-2/+3
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| * [svn-r27768] Description:Quincey Koziol2015-09-141-2/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
* | [svn-r27261] apply metadata enhancement patch that was based on the mdc 3 ↵Mohamad Chaarawi2015-06-211-0/+2
|/ | | | branch.
* [svn-r26279] re-commit 26260 that Dana moved out fixing the versioning of ↵Mohamad Chaarawi2015-02-231-3/+0
| | | | functions to work with v16 default API.
* [svn-r26271] Reverse merge of r26260 which was causing daily test failures.Dana Robinson2015-02-221-0/+3
| | | | Tested on: jam w/ parallel and fortran
* [svn-r26260] - add an attribute callback to call H5_term_library when ↵Mohamad Chaarawi2015-02-201-3/+0
| | | | | | | | | MPI_COMM_SELF is destroyed. - add tests for above. - this is a fix for HDFFV-883. tested h5committest
* [svn-r25921] - wrap MPI 3 usage with MPI_VERSION compile time check.Mohamad Chaarawi2014-12-231-2/+4
| | | | - build out unbuffered stdout/err for windows
* [svn-r25790] fix bug in shapesame test where test fails with more than 10Mohamad Chaarawi2014-11-051-2/+8
| | | | | | | procs. This is a fix in the test itself and does not have to do with the library code. tested cloud machine with parallel.
* [svn-r24864] Description:Quincey Koziol2014-03-211-21/+2
| | | | | | | | | | | | | | | | | | Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial
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