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* [svn-r9727] Purpose:Quincey Koziol2004-12-291-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r9649] Purpose:MuQun Yang2004-12-081-0/+4
| | | | | | | | | | | | | | Adding routines to test irrgular hyperslab selection inside one chunk. Description: For debugging purpose, tests are turned off now. Solution: Platforms tested: AIX 5.1 and Linux 2.4 with parallel enabled. Misc. update:
* [svn-r9575] Purpose:MuQun Yang2004-11-241-8/+88
| | | | | | | | | | | | | | | | Adding testing code for collective IO implementation Description: Won't affect testing HDF5 library. Not tested yet, only check in for debugging purpose. Solution: Platforms tested: Linux 2.4 + mpich 1.2.6 Aix 5.1 + mpcc_r Misc. update:
* [svn-r9520] Purpose:MuQun Yang2004-11-111-0/+16
| | | | | | | | | | | | | | | | | | Adding general MPI derived datatype testing code. Description: The testing code will not be tested. The purpose of checking in is for better debugging later. HDF5 routine or daily test should not be aware of this. Solution: Platforms tested: Copper(AIX 5.1), Heping(Linux 2.4 + MPICH 1.2.6). Misc. update:
* [svn-r9358] Purpose:Quincey Koziol2004-10-041-1/+4
| | | | | | | | | | | | | | | Bug fix Description: Relax restrictions on parallel I/O to allow compressed, chunked datasets to be read in parallel (collective access will be degraded to independent access, but will retrieve the information still). Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Solaris 2.7 (arabica) IRIX64 6.5 (modi4) h5committest
* [svn-r9309] Purpose:Albert Cheng2004-09-221-9/+0
| | | | | | | | | | | | | | | Cleanup Description: Remove old hack for H5Eget_auto() which is not needed any more. Reverse H5E_set_auto_stack(H5EDEFAULT,...) back to previous code of H5E_set_auto(...). Same for H5E_get_auto_stack. Platforms tested: Only tested in Eirene PP as the change is pretty straight forward. Misc. update:
* [svn-r9274] Purpose:John Mainzer2004-09-181-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | Add test to verify the fix of the parallel I/O mode confusion bug. Description: While the parallel I/O mode confusion bug is fixed, an automated regression test for this bug would be useful. Solution: Added a modified version of the original bug demonstration program to testphdf5. Platforms tested: copper h5committested eirene (parallel) Misc. update:
* [svn-r9234] Purpose:Quincey Koziol2004-09-091-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Tweak recent "forward compatibility" changes to the H5E* API (which allowed for the old H5E API functions to remain unchanged) by allowing for the error stack callback function (H5E_auto_t) to also remain unchanged from the 1.6 branch. This required changing the H5E{get|set}_auto routines to have the old style H5E_auto_t type (which didn't have a stack ID parameter) and the new H5E{get|set}_auto_stack routines to have a newer "H5E_auto_stack_t" type (which has a stack ID parameter). This should make the H5E API changes as forwardly compatible as possible. One side-affect of this change was that it was impossible to determine if the current auto error callback was the old style (H5E_auto_t) or the new style (H5E_auto_stack_t) of callback, so a new API function (H5Eauto_is_stack) was adde to query this. Platforms tested: FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modi4) h5committest
* [svn-r9071] Purpose:MuQun Yang2004-08-121-2/+2
| | | | | | | | | | | | | | | | Make collective chunk IO test more general Description: Previously collective chunk IO test is only fit for processor =4 with the dimension size to be set small; sometimes people would like to test with more than 4 processors(5,6 or more), the test therefore failed. Solution: To make the test case more general, dimensional size of the data is set to be large(right now 288 for each dimension), the disjoint hyperslab selection is re-calculated. Now the test cases should pass with 5,6 or 12 processors. Note, there is nothing wrong with the implementation of the library, it is the test case that causes the failure with the number of processor greater than 4. Platforms tested: Only at eirene, since only the test code is modified a little and it is very slow to test the parallel case. Misc. update:
* [svn-r8987] Purpose:Quincey Koziol2004-08-021-0/+1
| | | | | | | | | | | | Code cleanup Description: Fix another batch of minor differences between the development and release branches. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8932] Purpose:Quincey Koziol2004-07-221-18/+4
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Clean up collective chunking code a bit. Also, add '--enable-instrument' configure flag to have a mechanism for determining that optimized operations happened correctly in the library (instead of just the "normal" way) by allowing 'flag' properties to be set outside the library and set when the "right" thing happens. This is mainly for debugging and regression checks, so we make certain we don't break optimized I/O by accident. It's enabled by default when --enable-debug is on (which is on by default in the development branch and off by default in the release branch), but can also be independently controlled with its own configure flag. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel IBM p690 (copper) w/parallel
* [svn-r8924] Purpose:MuQun Yang2004-07-211-0/+2
| | | | | | | | | | | | | | To test collective chunk IO properly. Description: See the previous message. Solution: See the previous message. Platforms tested: arabica(Sol 2.7), eirene(Linux), copper(AIX) Misc. update:
* [svn-r8907] Purpose:MuQun Yang2004-07-201-0/+22
| | | | | | | | | | | | | | | | | | | | To add collective chunk IO tests. Description: three tests are added. 1. Only one hyperslab for each process, and this hyperslab is fit in exactly one chunk. 2. non-contiguous hyperslabs in each process, these hyperslabs are fit in one chunk. 3. Single hyperslab for each process, smaller chunk is assigned. Number of chunks for every process is equal. Solution: the dataset size is set to be very small, will enlarge later. Platforms tested: AIX 5.1(copper) Misc. update:
* [svn-r8867] Purpose:Quincey Koziol2004-07-131-2/+1
| | | | | | | | | | | | | | | | | | | Bug fix Description: Fix error in chunked dataset I/O where data written out wasn't read correctly from a chunked, extendible dataset after the dataset was extended. Also, fix parallel I/O tests to gather error results from all processes, in order to detect errors that only occur on one process. Solution: Bypass chunk cache for reads as well as writes, if parallel I/O driver is used and file is opened for writing. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8533] Purpose: New test.Raymond Lu2004-05-171-0/+1
| | | | | | | Description: Test dataset and attribute of null dataspace for parallel. Platforms tested: copper and verbena(only parallel is concerned)
* [svn-r8294] Purpose:Albert Cheng2004-04-011-20/+29
| | | | | | | | | | | | | feature Description: Change testphdf5 to use the common test program syntax. Needed to change the protocols of all test programs to fit the requirement of the common test syntax. Platforms tested: "h5committested". Also tested in sol with PP mode.
* [svn-r8111] Purpose:Albert Cheng2004-01-241-4/+6
| | | | | | | | | | | | | Improvement Description: Changed parsing of verbose level by the common test library routine. Change t_mpi.c to use the Verbose control better. Platforms tested: verena (pp). Misc. update:
* [svn-r8096] Purpose:Albert Cheng2004-01-221-3/+11
| | | | | | | | | | | | | | | | Improvement. Description: Complete change of the verbose control to use the routines provided by the test/libh5test.a. Also put in a temporary fix for the H5Eset_auto() and H5Eget_auto() so that the Compat code are isolated in one place rather than all over the source file. Platforms tested: Tested in Eirene (parallel). Misc. update:
* [svn-r8013] Description:Albert Cheng2004-01-031-1/+1
| | | | | | | | | | | | Added a test of fill value before any data is written to a dataset. Rename short_dataset() as dataset_fillvalue() as it reflects better the tests. Also removed the option of -S since the fill value test will be tested always. Platforms tested: "h5committested" Misc. update:
* [svn-r8003] Purpose:Albert Cheng2003-12-311-42/+0
| | | | | | | | | | | | | | Code cleanup. Description: The H5Eclear() in the VRFY and INFO macros are not needed. After removing them, there is no need to have a separate v1.6 Compat version. Platforms tested: "h5committested" Misc. update:
* [svn-r7993] Purpose:Quincey Koziol2003-12-291-0/+1
| | | | | | | | | | | | Code cleanup, bug fixes Description: Wrap up rest of changes necessary for fixing the "short" MPI-I/O read problem that Robb reported. Platforms tested: FreeBSD 4.9 (sleipnir) too minor to require h5committest
* [svn-r7923] Purpose:Quincey Koziol2003-12-101-0/+40
| | | | | | | | | | | | Bug fix Description: Clean up a couple more 1.6 compat bugs that showed up when the library was compiled with parallel support. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel & 1.6 compat config not tested with h5committest
* [svn-r7701] Purpose:Bill Wendling2003-10-221-59/+65
| | | | | | | | | | | | | | Update Description: Added test for FPHDF5 to the testpar/ directory. If you specify --enable-fphdf5 during configuration, it'll run this test during a "make check". Platforms tested: Linux (FPHDF5 specific). Misc. update:
* [svn-r7615] Purpose:Quincey Koziol2003-10-131-1/+1
| | | | | | | | | | | Code cleanup Description: Clean up various compiler warnings. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel too minor to require h5committest
* [svn-r7480] Purpose:Quincey Koziol2003-09-161-0/+2
| | | | | | | | | | | | | | | | | Bug fix Description: The MPI_File_set_size() routine on ASCI Red is not able to extend files so that they are larger than 2GB. Solution: Add an extra macro which controls whether MPI_File_set_size() can handle >2GB offsets or if our "older" way of reading a byte, then writing a byte at the appropriate offset should be used. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7265] *** empty log message ***Raymond Lu2003-07-261-2/+2
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* [svn-r6975] Purpose:Quincey Koziol2003-06-051-0/+2
| | | | | | | | | | | Bug fix Description: Don't attempt to perform collective I/O on chunked datasets. Platforms tested: FreeBSD 4.8 (sleipnir) w/parallel h5committested
* [svn-r6795] Purpose:Bill Wendling2003-05-051-1/+9
| | | | | | | | | | | | | | | | Feature Add Description: Added knob so that the programmer can enable or disable GPFS hints during runtime instead of having it only enabled at configure/compile time. Some of the public APIs were changed to add an extra parameter for this option... Platforms tested: Blue (LLNL). It only affects the MPI/POSIX driver, so no need to test it on non-GPFS platforms. Misc. update:
* [svn-r6755] Purpose:Albert Cheng2003-04-251-0/+1
| | | | | | | | | | | | | | | feature Description: added test_fapl_mpiposix_dup to verify the MPIPOSIX is making duplicates of Communicator correctly. Platforms tested: Did not h5committested because these are all MPI code and well protected by HAVE_PARALLEL. Tested in eirene and modi4, both parallel mode. Misc. update:
* [svn-r6741] Purpose:Albert Cheng2003-04-231-0/+1
| | | | | | | | | | | | | | code cleanup. Description: Rename test_comm_info_delete to test_fapl_mpio_dup to better decribe what it does. Updated the comments to describe more accurate. Platforms tested: Did not run h5commmittest since the changes were all in parallel area. Ran parallel tests on modi4 and eirene. Misc. update:
* [svn-r6539] Purpose:Bill Wendling2003-03-311-0/+14
| | | | | | | | | | | | Update Description: Updated (and in some cases added) the copyright statement. Platforms tested: Linux (Comment changes...only tested if they compile) Misc. update:
* [svn-r6419] Raymond Lu2003-02-181-0/+2
| | | | | | | | | | | | Purpose: More test. Description: Test independent read of groups and chunked dataset. Solution: This test is similar to multiple group test. So just add it in the testphdf5.c,h. Platforms tested: modi4, eirene.
* [svn-r6055] Purpose:Quincey Koziol2002-11-051-0/+1
| | | | | | | | | | | | | | New feature Description: Add support for scalar dataspaces in parallel I/O. Platforms tested: Tested h5committest {arabica (fortran), eirene (fortran, C++) modi4 (parallel, fortran)} Also, FreeBSD 4.7 (sleipnir) serial & parallel Misc. update: Update release_docs/RELEASE for bug fixes, new features, etc.
* [svn-r5896] Purpose:Quincey Koziol2002-08-271-0/+1
| | | | | | | | | | | Code cleanup Description: Cleaned up some compiler warnings. Platforms tested: FreeBSD 4.6 (sleipnir) w/serial & parallel. Will be testing on IRIX64 6.5 (modi4) in serial & parallel shortly.
* [svn-r5800] Purpose:Quincey Koziol2002-07-151-0/+1
| | | | | | | | | | New feature. Description: Added MPI-posix VFL driver support. Platforms tested: FreeBSD 4.6 (sleipnir) w/parallel & IRIX64 6.5 (modi4) w/parallel
* [svn-r5674] Purpose:Quincey Koziol2002-06-191-5/+1
| | | | | | | | | | Code cleanup Description: Removed more compiler warnings, etc. Platforms tested: Linux 2.2.x (eirene) w/parallel
* [svn-r5667] Purpose:Quincey Koziol2002-06-191-2/+12
| | | | | | | | | | Code cleanup Description: Turn on more warnings in the IRIX builds and clean them up. Platforms tested: IRIX64 6.5 (modi4) w/parallel
* [svn-r4975] Description:Albert Cheng2002-02-151-2/+4
| | | | | | | | | | | | | | Users were alarmed by the OFFSET overflow and GB file size tests. Those tests only checks the limits of the MPI implementation, not really as an error. Solution: Changed the VRFY macro to indicate it is an "ERROR". Modified the INFO macro to print messages as "REMARK (not an error)" so that users would not be alarmed. Added an explanation string in the GB file size write/read. Platforms tested: eirene and modi4 (parallel)
* [svn-r4582] Purpose:Albert Cheng2001-11-021-1/+10
| | | | | | | | | | | | | | | | | New test feature Description: Added create_faccess_plist() that create just MPIO or split+MPIO file-access property list. This in turn can run parallel tests with just MPIO or with Split-file VFD too. Added -s option for split-file Plus MPIO tests. For testphdf5.c: removed a bunch of old debug code that got left in by mistake. Platforms tested: Modi4 and eirene parallel. But it has uncovered errors in the library. The test program is correct though. Checking the test program in so that it won't get lost and can be used for debugging. Also, the -s is not used by default during test. At least it won't abort "make check".
* [svn-r3973] Purpose:Albert Cheng2001-06-071-0/+22
| | | | | | | | | | | | | Bug fix Description: The t_mpi used to fail and exit if any error detected. That aborted other process in a "make check" situation. Solution: Introduced a new error verification as INFO. INFO is for information only. It does not increase nerrors count. The program always exits with 0. Platforms tested: eirene with mpich.
* [svn-r3780] Purpose:Bill Wendling2001-04-051-2/+3
| | | | | | | | | | | | | | Update Description: Changed #include <hdf5_file.h> to #include "hdf5_file.h" to be consistent with the new way of generating dependencies.
* [svn-r3664] Purpose:Albert Cheng2001-03-191-1/+1
| | | | | | | | | | | | Improvement Description: Changed the default value of $NPROCS from 2 to 3. This is the value libSAF uses since 3 processes have a much bigger chance catching parallel errors than just 2 processes. Changed the default dataset sizes from 800 to 1200 so that it is a multiple for 3 (and 8 too which is ofter used in the Tflops test.) Platforms tested: Modi4 (IRIX64) both serial and parallel modes.
* [svn-r3119] Purpose:Albert Cheng2000-12-121-6/+6
| | | | | | | | | | | | | | | | | | | New features Description: Some testers found the filename lengths too short. Changed it to use the FILENAME_MAX usually defined in stdio.h. If not, set it to 512 which should be sufficient for users but should not exceed any system limits. Also added a new test parameters of ndatasets so that the tester can specific a different number of datasets for the multiple datasets tests. Changed the datatype of datasets created to DOUBLE. This eliminates the current racing conditions. But the racing bugs during conversion still need to be tracked down and squashed. Platforms tested: Modi4 -64.
* [svn-r2983] Purpose:Albert Cheng2000-11-211-2/+2
| | | | | | | | | | | | | | | Simple changes Description: testphdf5.h: Call MPI_Abort when error is detected. MPI_Finalized was used before but it might hang if the test has already encountered errors. Also, it does not do the H5Eprint any more since auto report is on. t_mdest.c: Changed the variable name of rank and nprocs to mpi_rank and mpi_size so that it is the same with the other tests and can use the VRFY macro call. Platforms tested: modi4-64.
* [svn-r2710] Purpose:Albert Cheng2000-10-201-2/+2
| | | | | | | | | | | | | | Features, kind of. Description: Separated the MPI features test into its own independent program so that it can be tested on its own without too much HDF5 stuff involved. Added automatic removal of temporary test files after the tests completed. Reduced the size of the dataset dimensions to avoid tripping the SGI MPI problems of running out of internal mpi type entries. Platforms tested: O2K -64
* [svn-r2641] Purpose:Albert Cheng2000-10-091-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Added features Description: There were no automatic tests for transfering zero elements. Solution: t_dset.c: Added two new patterns of ZROW (zero rows for process 0) and ZCOL(zero columns for process 0). ZROW test was added but it failed because the current library does not accept it. Not compiled in now. Need to fix the library before turning it back on again and also to add the ZCOL test. t_mdset.c: Added statement to show progress. Also the MPI_Barrier() call get processes synchornoized. It eliminates the racing condition but this is not a permenant solution. The library code needs to be fixed. testphdf5.c: Added a bunch of MPI_Type_XXX debug code. Added the -md option to skip the multiple datasets tests. Changed the cosmitic appearance of the banner messages. testphdf5.h: When an error is detected, the old way was to call MPI_Finalize() before exiting. This sometimes hangs because some processes may be waiting for a message of a different tag. Changed to call MPI_Abort() for now so that the whole MPI job would abort rather than hanging due resource limits exceeded. Added the definition of ZROW and ZCOL. Platforms tested: Modi4 -64.
* [svn-r1947] Changed the test files prefix to use the h5_fixname() in ↵Albert Cheng2000-01-261-0/+1
| | | | | | | | | | | | test/libh5test.a. Makefile.in: Added test/ as one of the -I directories to search for header files. Needed because <h5test.h> is used. t_file.c t_mpi.c testphdf5.c testphdf5.h: Added FILENAME to meet the assumption in h5test.h. (May use CLEANUP in the future.) Moved the prefix setting to the h5_fixname().
* [svn-r1465] src/H5Fmpio.c:Albert Cheng1999-07-121-2/+0
| | | | | | | | | | | | | Removed the unnecessary #include of mpi.h and mpio.h. (They are included already in H5public.h when applicable.) Changed couple debug printing to be controlled like the others. src/H5public.h: Officially, mpio.h should be in mpi.h but MPIO are not always supported by the vendor yet. Make the #include of mpio.h conditional when it is not in mpi.h. testpar/testphdf5.h: Removed the unnecessary #include of mpi.h and mpio.h. (They are included already in H5public.h when applicable.)
* [svn-r1417] t_mpi.c:Albert Cheng1999-07-031-0/+1
| | | | | | | | | | Changed it to skip the test instead of aborting when there is not enough processes to do the test. Also corrected an error in the error reporting printf statement. t_dset.c: testphdf5.c: testphdf5.h: Added option for specifying chunk dimensions.
* [svn-r1398] Purpose:Albert Cheng1999-06-301-4/+3
| | | | | | | | | | | | | | | | new feature Makefile.in: Added the dependence of *.c on the testphdf5.h t_dset.c: testphdf5.c: testphdf5.h: testphdf5 now takes optional arguements for dataset dimension sizes. That allows testing with different dimension sizes without recompiling the whole thing. Platform tested: O2K
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