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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* HDFFV-10392,10393,01385 merge from developAllen Byrne2018-01-221-2/+0
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* Fix link_libs and static CRT fortranAllen Byrne2018-01-051-2/+2
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* Update link target commandsAllen Byrne2017-12-211-2/+8
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* Add assignment to get value from environment variable realtimeOutput.lrknox2017-12-041-22/+56
| | | | Propagate changes to Makefile.ins with bin/reconfigure.
* HDFFV-10321 merge from developAllen Byrne2017-11-022-5/+5
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* Merge branch '1.8/master' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 ↵lrknox2017-08-251-4/+2
|\ | | | | | | into hdf5_1_8
| * Disable building of libdynlib* dynamically loaded plugin test librarieslrknox2017-06-141-0/+1
| | | | | | | | | | | | | | on CYGWIN. Added known problem entry to RELEASE.txt. Set version for 1.8.19 release. Barbara updated contents of README.txt file.
| * Moved libdynlib* plugin test libraries to noist_LT_LIBRARIES with addedlrknox2017-06-121-4/+1
| | | | | | | | | | | | | | flag '-rpath /nowhere' to stop them being installed while keeping them from linking with libhdf5, etc. Incremented version to 1.8.19-pre1 and ran bin/release to create tar and zip files for testing.
* | generated reconfigure files for configure changesM. Scot Breitenfeld2017-08-041-0/+1
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* Update text in COPYING files in subdirectories to match changes tolrknox2017-05-242-7/+15
| | | | | | | | | copyright notices in source files. Update Copyright notices in acsite.m4 and bin/yodconfigure that were overlooked by chkcopyright. Remove broken and unnecessary urls from comments in hl/fortran/src/H5IMcc.c and hl/src/H5IM.c. Commit bin/reconfigure changes to generated files.
* Change copyright headers to replace url referring to file to belrknox2017-05-1622-132/+88
| | | | removed and replace it with new url for COPYING file.
* Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIESlrknox2017-05-101-2/+5
| | | | | | and other changes to Makefiles and config/conclude.am to eliminate link errors with new libdynlib*_la_LDFLAGS which were added to stop libdynlib* files linking to external libraries.
* Merge/port changes from develop back to 1.8 for tools and cmakeAllen Byrne2017-03-296-8/+8
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* HDFFV-9875 Bring changes from develop branchAllen Byrne2017-02-061-10/+10
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* Update CMake required to version 3.2.2Allen Byrne2017-01-181-1/+1
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* Update shared object file numbers according to changes in v1.8.18 release.lrknox2016-11-011-11/+23
| | | | | Update autotools and libtool versions. Run bin/reconfigure.
* [svn-r30278] Merge revision 30270 to the 1.8 branchNeil Fortner2016-08-113-0/+92
| | | | | | | | Fix an issue that could occur when allocating a chunked dataset in parallel, with an alignment threshold set to be larger than the chunk size but smaller than the size of the small data aggregator. Tested: h5committest, jelly, ummon (trunk); h5committest, jelly, ummon (1.8)
* [svn-r27532] Merge of CMake dual-binary changes from CMake branch to 1.8Allen Byrne2015-08-191-4/+4
| | | | Tested: local linux (CMake branch has been tested on Windows)
* [svn-r27429] merge 27427 from trunk:Mohamad Chaarawi2015-07-241-0/+3
| | | | | | | - free comm keyval after setting atribute on comm_self - free allocated buffer in t_file_image test tested on jam with parallel.
* [svn-r27179] Merge 27162 & 27163 from trunk:Mohamad Chaarawi2015-06-104-9/+97
| | | | | | | | fix for HDFFV-9412: - Check for mpi is_initialized and is_finalized before making MPI calls in init/terminate of HDF5. - Add a test to make sure we can make serial HDF5 calls from rank 0 after MPI_Finalize is called. tested with h5committest
* [svn-r27165] Merge 27133 & 27158 from trunk:Mohamad Chaarawi2015-06-081-12/+12
| | | | | | | | | - Add a new attribute function characterstic for format: * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r26728] Merge trunk reviwions 26669 and 26670.Larry Knox2015-04-041-1/+0
| | | | | | Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure. Tested h5committest
* [svn-r26697] HDFFV-9131: Remove obsolete/unneeded sections.Allen Byrne2015-04-011-2/+0
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* [svn-r26600] Fix CMake target calls to add new parameterAllen Byrne2015-03-261-2/+2
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* [svn-r26582] Merge r26509 from trunkJerome Soumagne2015-03-251-2/+0
| | | | Run reconfigure after merges from autotools_rework branch
* [svn-r26413] Merge of r26276 from trunk.Dana Robinson2015-03-101-2/+1
| | | | | | | | | | | | | | | | | | | | | | Cleans up time functions in the autotools input files. - Lumps all the time functionality together in configure.ac. This was previously more spread out due to Solaris issues with the ordering of certain checks. - Removes processing that handles __tm_gmtoff members of struct tm. (libc-4) - Removes BSDgettimeofday(). (IRIX 5.3) - Removes timezone struct processing in gettimeofday(). (considered harmful) Fixes: HDFFV-9083 and HDFFV-9085 Tested on: h5committest OS X (quail) Solaris (emu)
* [svn-r26395] Merges r26329 from trunkDana Robinson2015-03-093-36/+24
| | | | | | | | | | | | | | Removed the configure option that allows selective disabling of individual internal filters (fletcher32, shuffle, etc.). This feature mucked up the code with a lot of #ifdefs, saved very little space and was not scalable to a general scheme for library size reduction. We've decided to remove the feature while we investigate a more general scheme for decreasing the library size. Fixes: HDFFV-9086 Tested on: h5committest
* [svn-r26371] Update cmake mininum versionAllen Byrne2015-03-051-1/+1
| | | | Update windows wix cpack process.
* [svn-r26314] Brought autotools related changes from the trunk to the branch, ↵Scot Breitenfeld2015-02-261-1/+2
| | | | r26188 r26280
* [svn-r26304] bring 26303 from trunk:Mohamad Chaarawi2015-02-251-3/+3
| | | | remove files with .clog2 extension generated by MPE when doing make clean
* [svn-r26298] merge 26279 from trunk.Mohamad Chaarawi2015-02-258-23/+300
| | | | | | HDFFV-883: attach callback to terminate HDF5 library when MPI_COMM_SELF is destroyed on MPI_Finalize. tested h5committest.
* [svn-r26224] merge 26180 from trunk:vms_last_support_1_8Mohamad Chaarawi2015-02-182-2/+8
| | | | | | | | | | configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch: - Remove Infering parallel compilers (C and Fortran) from configure.ac - Remove restriction to build shared with parallel - Cleanup parallel sections in configure.ac - remove large file support checks - MPE fixes.
* [svn-r25965] - build out unbuffered stdout/err for windowsMohamad Chaarawi2015-01-082-4/+8
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* [svn-r25964] - merge 25963 from trunk:Mohamad Chaarawi2015-01-081-40/+40
| | | | | | | - Do not remove the prefix in the chunk alloc file, otherwise it makes the H5Fcreate fail when prefix is specified. - fix tabbing in that file too. tested: jam w/ parallel
* [svn-r25791] merge 25790 from trunk.Mohamad Chaarawi2014-11-051-2/+8
| | | | | | | | fix bug in shapesame test where test fails with more than 10 procs. This is a fix in the test itself and does not have to do with the library code. tested cloud machine with parallel.
* [svn-r25780] merge 25779 from trunk.Mohamad Chaarawi2014-11-041-4/+11
| | | | | | fix bug in parallel tests where a compact dset is being created proportional to the process count without regard to the 64KB limit for compact datasets.
* [svn-r25682] bring 25651 and 25659 from trunk.Mohamad Chaarawi2014-10-072-2/+7
| | | | | Fix for: HDFFV-8715 HDF5_PARAPREFIX is ignored in parallel dense attribute and performance tests.
* [svn-r25574] Merge 25573 from trunk:Mohamad Chaarawi2014-09-051-1/+1
| | | | - fix error output when dataset verify detects wrong data.
* [svn-r25519] HDFFV-8880: Remove t_posix_compliant test referencesAllen Byrne2014-08-061-5/+0
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* [svn-r25497] Description:Quincey Koziol2014-07-306-709/+708
| | | | | | | | | | Merge changes that correspond to the 64-bit ID changes (without the actual switch to 64-bit IDs) to the 1.8 release branch. (Plus a few minor cleanups and alignments with the trunk that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r25404] add serial and parallel regression tests for zero dset ↵Mohamad Chaarawi2014-07-103-0/+61
| | | | | | read/write bug. (merged from trunk)
* [svn-r25402] Bring 25397/8 from trunk:Mohamad Chaarawi2014-07-103-177/+145
| | | | | | | - remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today. - fix bug in t_mpi.c (HDFFV-8856) tested with h5committest.
* [svn-r25222] Merge cmake_ext_mod into 1.8Allen Byrne2014-05-272-3/+6
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* [svn-r25106] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-251-1/+0
| | | | | | | | back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
* [svn-r24980] HDFFV-8290: Merge automake 1.14.1 changes from trunkAllen Byrne2014-04-073-68/+450
| | | | Tested: h5committest
* [svn-r24915] Correct merge mistakeAllen Byrne2014-03-271-1/+0
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* [svn-r24906] Merge latest CMake changes from trunk.Allen Byrne2014-03-262-33/+34
| | | | Tested: local linux
* [svn-r24878] Description:Quincey Koziol2014-03-2414-1330/+78
| | | | | | | | | | | | | | | | | | | | | Bring r24864 from trunk to 1.8 branch: Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial (daily tested on trunk)
* [svn-r24785] Description:Quincey Koziol2014-03-123-123/+725
| | | | | | | | | | | | | Bring r24769 & r24772 from trunk to 1.8 branch: Check in Mohamad's changes to support collective I/O on point selections, along with some other minor cleanups. Correct some dynamically sized arrays that fail on Windows. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel (And has been through the daily test regime on the trunk)
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