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* Final merge of page buffering branch to developQuincey Koziol2017-03-146-6/+2784
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* Merge pull request #321 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-03-022-3/+3
|\ | | | | | | | | | | | | | | * commit 'f4dd30f41ccee7bcd97fba065573c5201cbcc743': Update CMake formatting Update CMake files and formatting HDFFV-10120 verify nozlib checking with tools tests cmake non-code typo
| * Update CMake files and formattingAllen Byrne2017-03-012-3/+3
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* | Misc. small cleanups to sync against incoming page buffering changes.Quincey Koziol2017-03-021-7/+3
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* Correct issues from pull request reviews.Quincey Koziol2017-02-281-2/+1
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* Corrected version of 4b5e05c084f93c35dae946c2c9e814d565a613b0:Quincey Koziol2017-02-281-16/+16
| | | | | Fix some more signed -> unsigned value issues with cache data structures, also misc. style cleanups. All to align w/incoming page_buffering changes.
* Revert "Fix some more signed -> unsigned value issues with cache data ↵Quincey Koziol2017-02-281-17/+22
| | | | | | structures, also" This reverts commit 4b5e05c084f93c35dae946c2c9e814d565a613b0.
* Fix some more signed -> unsigned value issues with cache data structures, alsoQuincey Koziol2017-02-231-22/+17
| | | | misc. style cleanups. All to align w/incoming page_buffering changes.
* Bring change to use array of metadata cache entry classes for H5C_createQuincey Koziol2017-01-281-2/+3
| | | | instead of array of class names from cache image branch.
* Update cmake min version and cmake command conventionAllen Byrne2017-01-102-11/+11
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* Bring changes to metadata cache "get entry status" call and newQuincey Koziol2017-01-061-0/+24
| | | | | "child serialized / unserialized" messages and support from the cache image branch.
* Add "image up to date" flag / parameter to metadata cache entry status calls.Quincey Koziol2017-01-061-1/+1
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* Bring SWMR support in to the main development branch. (Finally!) More testsQuincey Koziol2016-12-021-20/+62
| | | | and the tool and API wrappers will be coming in over the weekend.
* Eliminate unnecessary data structure for parallel collective metadata cache I/OQuincey Koziol2016-11-281-1/+0
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* Remove unnecessary assert.Quincey Koziol2016-11-251-1/+1
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* Bring over support for retrying metadata cache entry loads, along with all theQuincey Koziol2016-11-201-7/+8
| | | | supporting metadata cache callback changes, etc.
* Remove 'clear' callback from metadata cache client interface, using theQuincey Koziol2016-11-181-61/+12
| | | | new 'entry cleaned' notify action innstead.
* Remove explicit support within the metadata cache for tracked compressedQuincey Koziol2016-11-171-15/+12
| | | | entries, they are now completely handled in the clients.
* Bring over new 'notify' metadata cache client callback actions for when anQuincey Koziol2016-11-121-2/+55
| | | | | entry is cleaned / dirtied or its [flush dependency] child entry is cleaned / dirtied.
* [svn-r30270] Fix an issue that could occur when allocating a chunked dataset ↵Neil Fortner2016-08-083-0/+92
| | | | | | | | | in parallel, with an alignment threshold set to be larger than the chunk size but smaller than the size of the small data aggregator. Tested: koala, ostrich (h5committest); jelly, ummon
* [svn-r30201] Description:Quincey Koziol2016-07-182-0/+10
| | | | | | | | | Switch test framework to dynamically allocate the testing array, and expand the length of the description field. Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30189] Description:Quincey Koziol2016-07-181-8/+8
| | | | | | | | | Clean up more warnings: drop the warning count from ~1310 down to ~940, with only 31 types of warnings in 148 files (down from 38 types in 167 files). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30112] Description:Quincey Koziol2016-06-281-1/+1
| | | | | | | | | | Move updated flush dependency code in metadata cache from revise_chunks branch to trunk. Also many of the cleanups from r30111 in the revise_chunks branch. Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r30075] Description:Quincey Koziol2016-06-142-8/+1
| | | | | | | | | | Bring object/dataset/group/named datatype features from revise_chunks branch to trunk. Also CMake support for h5format_convert and a bunch of misc. cleanups. Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r30068] Description:Quincey Koziol2016-06-131-2/+2
| | | | | | | | Bring metadata cache corking to trunk. Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29880] Add HD to sleep function callsAllen Byrne2016-05-043-3/+3
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* [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.Allen Byrne2016-05-041-3/+3
| | | | Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
* [svn-r29632] Description:Quincey Koziol2016-04-051-6/+10
| | | | | | | | Align w/revise_chunks branch Tested on: MacOSX/64 10.11.4 (amazon) w/parallel (h5committest forthcoming)
* [svn-r29607] Description:Quincey Koziol2016-04-022-136/+186
| | | | | | | | | Bring "don't filter partial edge chunks" capability from revise_chunks to trunk. Tested on: MacOSX/64 10.11.4 (amazon) w/debug, production & parallel (h5committest forthcoming)
* [svn-r29545] Minor normalization w/ trunk in preparation for big merge.Dana Robinson2016-03-241-5/+8
| | | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial autotools parallel (MPICH 3.1.4)
* [svn-r29088] - Add a test for retrieving the property values for the new ↵Mohamad Chaarawi2016-02-113-0/+117
| | | | | | | | | coll md functions. - ifdef some code that don't need to be built in parallel - more minor enhancements tested on bb-8 with parallel and serial
* [svn-r29081] - merge in the phdf5_metadata_opt/ branch with the collective ↵Mohamad Chaarawi2016-02-105-6/+290
|\ | | | | | | | | | | | | | | metadata optimizations. - rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library tested on bb-8 with parallel and serial.
| * [svn-r29079] rename the coll read requirement function.Mohamad Chaarawi2016-02-104-5/+6
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| * [svn-r29077] Description:Quincey Koziol2016-02-104-6/+7
| | | | | | | | | | | | | | | | Normalize against the trunk, in preparation for final merge. Tested on: MacOSX/64 10.11.3 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r29059] merge from trunk.Mohamad Chaarawi2016-02-071-5/+5
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| * [svn-r28959] merge from trunk.Mohamad Chaarawi2016-01-221-1/+0
| |\ | | | | | | | | | renaming metadata dxpl properties.
| * | [svn-r28895] Description:Quincey Koziol2016-01-141-2/+1
| | | | | | | | | | | | | | | | | | | | | | | | Minor code tweaks and cleanups during review. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5comittest not required on this branch)
| * | [svn-r28649] - add new API to toggle collective metadata write.Mohamad Chaarawi2015-12-144-17/+12
| | | | | | | | | | | | | | | - set default to FALSE - fix some bugs.
| * | [svn-r28636] merge from trunk.Mohamad Chaarawi2015-12-141-9/+9
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| * | [svn-r27929] merge from trunk.Mohamad Chaarawi2015-10-016-1453/+11
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| * | | [svn-r27576] - mark the entry as indepndent when expunged.Mohamad Chaarawi2015-08-251-22/+2
| | | | | | | | | | | | | | | | - disable the metadata coll hint for smoke checks 1 & 2.
| * | | [svn-r27558] merge from trunk.Mohamad Chaarawi2015-08-242-10/+28
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| * \ \ \ [svn-r27436] merge from trunk.Mohamad Chaarawi2015-07-273-8/+10
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| * | | | | [svn-r27264] some cleanups.Mohamad Chaarawi2015-06-221-6/+1
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| * | | | | [svn-r27261] apply metadata enhancement patch that was based on the mdc 3 ↵Mohamad Chaarawi2015-06-214-1/+315
| | | | | | | | | | | | | | | | | | | | | | | | branch.
* | | | | | [svn-r29057] added dxpl type checking when debug mode is enabled ↵Mohamad Chaarawi2016-02-071-5/+5
| |_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | (H5_DEBUG_BUILD) tested on bb-8 with Serial and Parallel, debug and production builds.
* | | | | [svn-r28040] avoid use of MPI deprecated routines.Mohamad Chaarawi2015-10-121-9/+9
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* | | | [svn-r27794] Reintegration merge of features/autotools_rework branch with trunkDana Robinson2015-09-151-1444/+0
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | NOTES: - Developers will have to run autogen.sh before building with the autotools. - autogen.sh takes the -p option to mimic the old bin/reconfigure behavior. - The generated error, overflow and version headers have been left in place. - The generated H5LT parser code has also been left in place. - There are no changes for CMake users at this time. Tested on: h5committest
| * \ \ \ [svn-r27507] Merge of r27237-27500 from the trunk.Dana Robinson2015-08-144-321/+616
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested w/ h5committest NOTES: - The manifest may still be messed up. - Cmake fails since the dual binary work needs to be merged with this repo's CMake externals.
| * \ \ \ \ [svn-r27222] Merge of r27035-27221 from the trunk.Dana Robinson2015-06-174-514/+357
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on 64-bit linux VM: Serial: C++ and Fortran 2003 Parallel: Fortran
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