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* Fix several spelling/grammar issues (#3621)jhendersonHDF2023-10-038-12/+12
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* Fix typos (#3609)H. Joe Lee2023-09-272-27/+27
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* Remove `sh` to run bash script. (#3590)H. Joe Lee2023-09-261-8/+6
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* Replaces HDgetenv with getenv (#3599)Scot Breitenfeld2023-09-264-9/+9
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* Fix typos and grammar in t_pread. (#3565)H. Joe Lee2023-09-221-7/+7
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* Check return values from HDF5 API calls. (#3556)H. Joe Lee2023-09-221-4/+2
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* Strip HD prefix from string/char C API calls (#3540)Dana Robinson2023-09-1522-338/+336
| | | | | | | | | | | | | | | | | | | | | * Strip HD prefix from string/char C API calls * HD(f)(put|get)(s|c) * HDstr* * HDv*printf * HD(s)(print|scan)f * HDperror But NOT: * HDstrcase* * HDvasprintf * HDstrtok_r * HDstrndup As those are not C99 and have portability work-around implementations. They will be handled later. * Fix th5_system.c screwup
* Remove HD prefix from HDlog10 calls (#3539)Dana Robinson2023-09-151-8/+8
| | | | Was missed in a previous commit and causes building subfiling to fail.
* quiet warning on sunspot (gcc 11.2.0) (#3534)Scot Breitenfeld2023-09-131-1/+1
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* Consistent initialization of hid_t in the tests (#3521)Scot Breitenfeld2023-09-0813-182/+182
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* Convert hbool_t --> bool in testpar (#3495)Dana Robinson2023-09-0537-1616/+1613
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* Removed all the ranks printing out testing information (#3457)Scot Breitenfeld2023-09-013-3/+11
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* chore: match function call and VRFY() output (#3428)H. Joe Lee2023-08-251-3/+3
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* Fix use of uninitialized value in testpar/t_dset.c test (#3423)jhendersonHDF2023-08-241-0/+2
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* Skip atomicity tests for OpenMPI major versions < 5 (#3421)jhendersonHDF2023-08-242-338/+9
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* chore: remove gubbins comment (#3420)H. Joe Lee2023-08-242-4/+0
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* chore: fix typo (#3405)H. Joe Lee2023-08-221-1/+1
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* Fix serial to parallel chunked dataset file space allocation bug (#3394)jhendersonHDF2023-08-223-0/+280
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* Fix assertion failure during file close on error (#3387)jhendersonHDF2023-08-183-0/+55
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* Work around a testphdf5 failure on Cray MPICH machines (#3361)jhendersonHDF2023-08-081-7/+10
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* Implementation of the mpio driver with selection I/O. (#3222)vchoi-hdfgroup2023-08-074-87/+2139
| | | | * This changes the default selection I/O to on for MPIO.
* test(parallel): verify FALSE case (#3356)H. Joe Lee2023-08-051-11/+17
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* Fixes the last of the -Wextra-semi-stmt warnings (#3326)Sean McBride2023-08-028-128/+128
| | | | | | | | | | | | | | | | | | | | | | | * Fixed extra semi warning by adjusting alternative macro definitions * Find-replace H5E_END_TRY; -> H5E_END_TRY * Made H5Epush_goto a do-while loop, fixed indentation * Made GOTOERROR and ERRMSG do-while loops * Made Hgoto_error and Hgoto_done do-while loops * Made vrfy_cint_type and vrfy_ctype do-while loops * Made TEST_TYPE_CONTIG and others do-while loops * Removed extraneous semi-colons * Committing clang-format changes --------- Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* chore: fix typo - persent -> present (#3273)H. Joe Lee2023-07-254-4/+4
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* chore: fix grammar - get hang -> get hung (#3272)H. Joe Lee2023-07-248-15/+15
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* chore: make VRFY output consistent (#3268)H. Joe Lee2023-07-241-1/+1
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* Fixed some -Wunused-variable warnings and one Wsometimes-uninitialized ↵Sean McBride2023-07-201-1/+1
| | | | warning (#3260)
* Fix some warnings in developer builds (#3247)jhendersonHDF2023-07-185-60/+27
| | | | | * Fix some warnings in developer builds * Switch approach to Winline flag
* Replace support.hdfgroup.org URLs for alternative COPYING file (#3228)Larry Knox2023-07-1221-20/+31
| | | | | | | | | * Replace support.hdfgroup.org URLs for alternative COPYING file locations in copyright headers with https://www.hdfgroup.org/licenses. Replace support.hdfgroup.org URL for alternative COPYING_LBNL_HDF5 with github URL. Tweak chkcopyright script for change from UICOPYRIGHTSTR to THGCOPYRIGHTSTR.
* Remove HD from HDmem* calls (#3211)Dana Robinson2023-06-2925-202/+199
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* Remove programmer/date from comments (#3210)Dana Robinson2023-06-2931-724/+0
| | | | * Removes Programmer: and Date: fields * Fixes a few Modifications: fields leftover from previous work
* Remove HD from C std lib file ops (#3206)Dana Robinson2023-06-297-107/+107
| | | | | | | | | * HDfclose * HDferror * HDfeof * HDfflush * HDfopen * HDfread * HDfwrite
* Remove HD from strto* calls (#3204)Dana Robinson2023-06-291-2/+2
| | | | | | | | * HDstrtod * HDstrtol * HDstrtoll * HDstrtoul * HDstrtoull * HDstrtoumax
* Rename HDexit() and related to exit(), etc. (#3202)Dana Robinson2023-06-296-17/+17
| | | | | * HDatexit * HDexit * HD_exit
* Remove some "Programmer" comments (#3209)Dana Robinson2023-06-292-8/+6
| | | | | | | | | | These are meaningless noise. Removes the "Programmer" lines on comment start lines: /* Programmer: John Smith These complicate my sed script that will rip out the rest of the comments.
* Rename HDato*() to ato*() (#3201)Dana Robinson2023-06-291-1/+1
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* Remove HD from protected POSIX calls (#3203)Dana Robinson2023-06-291-1/+1
| | | | | | | | | | | These calls are non-C99 but protected by ifdefs and have no Windows equivalents: * HDalarm * HDasprintf * HDclock_gettime * HDfcntl * HDgethostname * HDgetrusage * HDsymlink
* Remove HD from memory allocate/free calls (#3195)Dana Robinson2023-06-2841-1503/+1502
| | | | | | * HDcalloc * HDfree * HDmalloc * HDrealloc
* Rename HD(f)printf() to (f)printf() (#3194)Dana Robinson2023-06-2849-3442/+3402
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* Rename HDassert() to assert() (#3191)Dana Robinson2023-06-2819-457/+457
| | | | | * Change HDassert to assert * Fix bin/make_err
* Fix assertion failure when attempting to use IOC VFD directly (#3187)jhendersonHDF2023-06-282-0/+42
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* Remove HD from fork/exec*/wait* (#3190)Dana Robinson2023-06-281-5/+5
| | | | These are not C99 but are hidden behind ifdefs and are highly unlikely to ever have non-POSIX equivalents.
* Many fixes to various compiler warnings (#3124)Sean McBride2023-06-196-7/+7
| | | | | | | | | | | * Fixed various -Wmissing-variable-declarations by adding static keyword * In a few cases, renamed the variable suffix from _g to _s. * Fixed some -Wmissing-variable-declarations by using different declaration macros * Fixed various -Wconditional-uninitialized warnings by just initializing variable to zero * Fixed various -Wcomma warnings * Fixed clang -Wstrict-prototypes warnings * Fixed various -Wunused-variable warnings * Updated some casts to fix the only 3 -Wcast-qual warnings * Fixed the only -Wsometimes-uninitialized warning
* Many clang -Wextra-semi-stmt fixes (#2537)Sean McBride2023-06-164-14/+14
| | | | | * Adds semicolons to function-like macros * Adds a do..while(0) loop to some macros * Removes semicolons when inappropriate, especially H5E_TRY_BEGIN/END
* API test updates (#3018)jhendersonHDF2023-05-268-44/+411
| | | | | | | | | | | | | | | | | | | | | | | | | * Remove macros from api tests (#2929) * Remove macros and undefined callbacks (#2959) * Remove remaining macros from H5_api_tests_disabled.h (#2968) * Put some vol capability checks in testpar tests and remove remaining warnings (#2995) * API tests datatype generation cleanup * Clean up API tests' random datatype generation and fix bug with enum datatype generation * Init parallel API tests with MPI_THREAD_MULTIPLE * HDF5 API tests - Check VOL connector registration * Determine whether a VOL connector failed to load before running API tests * Cleanup some usages of H5VL_CAP_FLAG_CREATION_ORDER in API tests * Remove some now-unused macros from H5_api_tests_disabled.h * Enable HDF5 API tests by default * Implement CMake option to install HDF5 API tests * Check for invalid AAPL from H5Acreate * Enable building of VOL connectors alongside HDF5 in CMake * Prepend CMake VOL URL option indices with 0s so they come in order * Don't turn on API tests by default yet * Document VOL connector FetchContent functionality * Add release note for API test updates * Only install testing library if API tests are installed * Fix grammar
* Remove unnecessary fields from cache structs (#2951)Quincey Koziol2023-05-152-24/+2
| | | | | | | | | | | | * Remove unnecessary 'magic' field from cache structs Signed-off-by: Quincey Koziol <quincey@koziol.cc> * Committing clang-format changes --------- Signed-off-by: Quincey Koziol <quincey@koziol.cc> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Move functions into more focused source code modules (#2936)Quincey Koziol2023-05-121-2/+2
| | | | | | | | | | | | | | * Move functions into more focused source code modules, along with a small # of directly secondary effects. No actual changes to the contents of any moved routines. Signed-off-by: Quincey Koziol <quincey@koziol.cc> * Committing clang-format changes --------- Signed-off-by: Quincey Koziol <quincey@koziol.cc> Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Fix CMake generator expression syntax (#2909)Allen Byrne2023-05-052-6/+6
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* Fix some compile failures in API tests (#2913)jhendersonHDF2023-05-053-32/+4
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* Added summary report to test big IO (#2908)Scot Breitenfeld2023-05-051-12/+18
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