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* [svn-r6583] Elena Pourmal2003-04-031-12/+4
| | | | | | | | | | | | | | | | | | | Purpose: New tool Description: Pankaj created h5import tool long time ago. I am finally checking the source code in for the 1.6 release. Known problems: h5import test will crash if srcdir option is used; will be fixed before the release. Solution: Platforms tested: vebena, arabica, modi4 were tested. h5import tests passed I also tested on arabica with srcdir option to make sure that there is a problem when srcdir is used. After that I disabled h5import tests. Daily tests will build h5import, but will not run h5import tests. Misc. update:
* [svn-r6542] Purpose:Bill Wendling2003-03-311-3/+11
| | | | | | | | | | | | Update Description: Updated copyright statement Platforms tested: None needed Misc. update:
* [svn-r5973] Purpose:Pedro Vicente Nunes2002-10-091-1/+1
| | | | | | | | | added h5fiff to configure and makefiles Platforms tested: linux 2.4.18
* [svn-r5074] Purpose:Bill Wendling2002-03-201-2/+2
| | | | | | | | | Code Motion Description: Removal of HDF4 from the configure/Makefiles. This is a precursor to the actual physical removal of the HDF4 tools from the HDF5 tree. Platforms tested: Arabica, Dangermouse
* [svn-r4759] Bill Wendling2001-12-301-1/+6
| | | | | | | | | | | | Purpose: Bug fix Description: The "make depend" command wasn't propagating down into the tools/ directories. Solution: Added the "depend:" part to the Makefile in the tools/ subdirectory. Platforms tested: Linux
* [svn-r4325] Bill Wendling2001-08-101-2/+3
| | | | | | | | | Purpose: New Feature Description: Adding the h5cc script thingy. Platforms tested: Linux
* [svn-r3919] Rushabh Doshi2001-05-121-1/+1
| | | | | | | | | | | | | | | | | | | | | Purpose: Adding new feature Description: Added gif2h5 and h52gif conversion utilities Solution: The utilites follow the framework built for the gif2hdf and hdf2gif utilities for hdf4. The main files modified were those that read the H5 file and those that write H5 file. In the future, if you wish to continue with the framework and extend it to .png or some other fileformat the main files to edit will be the gif reader and writer. One point to note with h52gif. You have to specify the exact location of the image and the palette that it links to. You can choose not to specify a palette (uniform grayscale chosen in this case) but you must specify image location. In the future, someone could edit the readhdf.c source to enable the reader to parse the hdf file and select all images with corresponding palettes. Platforms tested: modi4 , eirene , hawkwind , arabica , Ren (NT 4.0) , Personal box (win2k)
* [svn-r3535] Purpose:Bill Wendling2001-03-021-7/+7
| | | | | | | | | | Bug Fix Description: We weren't doing cleans or installs in the lib/ subdirectory. Solution: Added lib to the for loops. Platforms tested: LInux
* [svn-r3523] Purpose:Bill Wendling2001-02-271-3/+3
| | | | | | | | | | | Bug Fix Description: For some reason, it was trying to cd to the examples/ and pablo/ directories to do a distclean. Only problem was, they aren't here. Solution: Removed those from the `for' loop. Platforms tested: Linux
* [svn-r3508] Purpose:Bill Wendling2001-02-231-9/+3
| | | | | | | | | | | | Bug Fix Description: We were trying to build the talign test program before the library was actually built. Solution: Moved talign test to the lib directory since it belongs with the library anyway. Platforms tested: Linux
* [svn-r3497] Purpose:Bill Wendling2001-02-221-2/+2
| | | | | | | | | | Fix Description: Left some more cruft in there. Solution: Removed. I still need to check on the testing of `talign'... Platforms tested: Linux
* [svn-r3496] Purpose:Bill Wendling2001-02-221-1/+1
| | | | | | | | | | Fix Description: Left in the separate subdirectories fro the small programms. Solution: removed them and replaced with the misc/ subdirectory Platforms tested: Linux
* [svn-r3491] Purpose:Bill Wendling2001-02-221-68/+69
| | | | | | | | Code Movement Description: Changed so that it works for compiling files in a subdirectory. Platforms tested: Linux, Kelgia
* [svn-r3475] Purpose:Albert Cheng2001-02-201-2/+2
| | | | | | | | | | | Bug fix Description: h4toh5test was being installed because it was put in the PUB_PROGS which is specifically for public programs to be installed. Solution: Moved it away from the PUB_PROGS list to the PROGS list. Platforms tested: eirene.
* [svn-r3453] MuQun Yang2001-02-191-1/+1
| | | | | | | | | | | Purpose: Fixing Makefile.in for compiling h4toh5test.c at the right option Without including hdf4 lib, h4toh5test will not be generated. Description: Solution: Platforms tested: arabica
* [svn-r3451] Purpose:Bill Wendling2001-02-191-1/+1
| | | | | | | | | Feature Add Description: Added support for the h4toh5test program which needs to be conditionally compiled in only if HDF4 is specified. Platforms tested: Linux
* [svn-r3418] MuQun Yang2001-02-161-2/+5
| | | | | | | | | | | Purpose: add contents to compile h4toh5test.c Description: solution: handled similar as h5dumptst.c Platforms tested: Linux(eirene), sun 5.7(arabica)
* [svn-r2981] Purpose:Bill Wendling2000-11-201-2/+1
| | | | | | | | | | | | | Bug fix Description: If TESTH5TOH4 or TESTH4TOH5 wasn't set, then it would mess up the testing process by adding a ``#'' to the for statement (since there was a line-continuation in the definition of the macro). Solution: Placed the macro expansions all on one line so that there's no junk characters picked up by accident. Platforms tested: OSF1 (Gondolin)
* [svn-r2724] Purpose:Albert Cheng2000-10-241-1/+2
| | | | | | | | | | | | | | new feature Description: h5ls was not tested Solution: Added a test script, testh5ls.sh, to give h5ls some tests. Since the output from h5ls is sometime machine dependent (e.g., Datatypes), can not compare them with expected output. For now, run it against various hdf5 binary files. If it exits with 0, consider it passes. Platforms tested: IRIX64, eirene, arabica.
* [svn-r2682] Purpose:Albert Cheng2000-10-131-3/+3
| | | | | | | | | | Bug fix Description: gmake check had been failing because of errors in the Makefile. Solution: Fixed it so that libtools.a got build first. Platforms tested: Eirene (Linux)
* [svn-r2643] Purpose:Bill Wendling2000-10-091-7/+9
| | | | | | | | | | | | Adding Testing Description: Alignment when putting elements in a compound datatype can be off. Solution: This was a bug which I'd fixed. Here's a program to exercise the bug. Platforms tested: Linux
* [svn-r2613] MuQun Yang2000-09-281-5/+15
| | | | | | | | | | | | | | | | | Purpose: add h4toh5 converter tool Description: add flag h4toh5 and testh4toh5 in the Makefile. Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: test on eirene and arabica. [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r2419] Setup PUB_PROGS so that all tools but h5dumptst will be installed.Albert Cheng2000-06-271-1/+2
| | | | h5dumptst generates the test suits files. It is not a user tool.
* [svn-r2242] Removed h5dumputil.c. Its functions have been migrated to ↵Albert Cheng2000-05-111-3/+3
| | | | h5tools.c.
* [svn-r1934] Removed the entry of h5findshd.c. Its routines have been moved toAlbert Cheng2000-01-071-1/+1
| | | | libh5tools.c.
* [svn-r1802] Changes since 19991019Robb Matzke1999-11-011-2/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./configure.in ./configure [REGENERATED] Added more checking for `make' features. ./Makefile.in ./doc/Makefile.in ./doc/html/Makefile.in ./doc/html/Tutor/Makefile.in ./examples/Makefile.in ./pablo/Makefile.in ./src/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in ./config/commence.in ./config/conclude.in ./config/depend.in [REMOVED] ./config/depend1.in [NEW] ./config/depend2.in [NEW] ./config/depend3.in [NEW] ./config/depend4.in [NEW] ./config/dependN.in [NEW] The directory search stuff was moved into commence.in, thereby shortening the Makefile.in prologues. ./doc/html/Dependencies [NEW] ./doc/html/Tutor/Dependencies [NEW] ./examples/Dependencies [NEW] ./src/Dependencies [NEW] ./test/Dependencies [NEW] ./testpar/Dependencies [NEW] ./tools/Dependencies [NEW] The `.distdep' files were all renamed to `Dependencies' to make them more obvious. They are required (but may be empty) in every directory that has a Makefile.in that ends with @CONCLUDE@ (you'll get an obvious error from make if you forgot to create one). ./bin/trace ./src/H5.c Added H5E_major_t and H5E_minor_t although tracing only prints the integer value. ./src/H5E.c ./src/H5Epublic.h Added tracing information. ./src/H5FDcore.c ./src/H5FDfamily.c ./src/H5FDgass.c ./src/H5FDmpio.c ./src/H5FDsec2.c ./src/H5FDstdio.c Fixed places where FUNC_LEAVE() evaluated it's argument more than once. Added tracing information. Wrapped long lines. ./config/gnu-flags Fixed a syntax error when we don't have a gnu compiler.
* [svn-r1753] Changes since 19991007Robb Matzke1999-10-151-2/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./configure.in ./src/H5config.h.in [REGENERATED] The /usr/ncsa/{include,lib} directories are only added if they actually exist. This fixes a warning on some systems. Checks for the <pdb.h> header file and also for either the PDB or Silo library, and if found prepares to compile the pdb2hdf program. ./config/distdep Relative path names for include files are changed to base names since the makefile contains the logic for searching and since it's likely that building the .distdep files happed from a location other than where they would be used in the file system. ./config/conclude.in Fixed shell errors when `for' loops iterate over nothing for the `uninstall' target. ./src/H5D.c ./src/H5Oefl.c File names for the external files are added to the heap when the dataset is created instead of when the object header is written. This fixes a rare infinite recursion bug. ./src/H5FD.c ./src/H5FDpublic.h Optimization to the free list causes H5FD_alloc() usage to go from >10 seconds to <0.4 second for one example (converting a 30MB equation of state file from PDB to HDF5 format). The optimization is to simply keep track of the largest item in the free list and not search the free list when the largest item is not big enough to satisfy the request. ./src/H5FDcore.c ./src/H5FDcore.h ./test/h5test.c If the `backing_store' property is true then a flush causes the entire contents of memory to be written to the specified file. This is in preparation for the ASCI/red optimizations and is currently tested by the pdb2hdf `--cached' switch. ./src/H5Odtypes.c Wrapped three long lines. ./tools/Makefile.in ./tools/pdb2hdf.c [NEW] A PDB-to-HDF5 translator. It only translates meta data -- the resulting HDF5 points into the PDB file for the raw data.
* [svn-r1515] Changes since 19990715Robb Matzke1999-07-191-18/+19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./Makefile.in [1.3] ./examples/Makefile.in [1.3] ./pablo/Makefile.in [1.3] ./src/Makefile.in [1.3] ./test/Makefile.in [1.3] ./testpar/Makefile.in [1.3] ./tools/Makefile.in [1.3] ./config/commence.in [1.3] ./config/conclude.in [1.3] ./config/depend.in [1.3] Added a `.PATH' target for Irix pmake which is identical to the VPATH used by most other `make' programs. Irix 6.5 (or 6.4?) and later `make' ignores VPATH. Started all beginning-of-line comments with `##' instead of just `#' because Irix `pmake' barfs on things like the following because it sees the `# if' as a directive: # make will barf on the following line # if running Irix pmake ./config/commence.in [1.3] Added empty definitions for optional `make' macros because Irix pmake complains if it sees a macro which has never been defined. The main body of the Makefiles can redefine these macros to whatever they need.
* [svn-r1393] Added entry for h5dumptst.c which creates test files for h5dump toolAlbert Cheng1999-06-301-2/+6
| | | | tests. h5dumptst should be run from inside testfiles directory.
* [svn-r1217] Changes since 19990426Robb Matzke1999-04-261-17/+17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./config/commence.in ./examples/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in Fixed some dependency problems in Makefiles. If the library version is updated then everything gets recompiled. ./src/H5G.c ./src/H5R.c Failure return value for object type functions is now H5G_UNKNOWN as documented. ./src/H5Shyper.c ./src/H5Spoint.c Fixed an unused argument warning. ./tools/h5debug.c Fixed a call to H5F_block_read() since the 4th argument is different now. ./tools/h5ls.c Added a space between the object name and class to make the output readable when the object name is longer than 24 characters. C
* [svn-r1184] Changes since 19990402Robb Matzke1999-04-151-1/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./config/commence.in ./config/conclude.in ./test/Makefile.in ./tools/Makefile.in Fixed so private libraries are not installed publicly. The installation directories `bin', `include', and `lib' are created mode 755. ./src/H5.c ./src/H5A.c ./src/H5F.c ./src/H5Fcore.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5R.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5T.c ./src/H5Tconv.c ./src/H5Vprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h ./test/chunk.c ./test/dsets.c ./test/dtypes.c ./test/h5test.c ./test/overhead.c ./test/ragged.c ./test/tattr.c ./tools/h5dump.c ./tools/h5findshd.c ./tools/h5ls.c Changed `__unused__' to `UNUSED' to fix a conflict with GNU header files. ./src/H5Tpkg.h ./test/h5test.h Removed __unused__ from forward function declarations. ./src/H5P.c Removed a comment about restrictions for the type conversion temporary buffers. Thanks to Quincey, the comment no longer applied. ./src/H5T.c Relaxed the H5Tpack() a little so it would pack compound data structures that had non-transient atomic members. ./tools/h5ls.c Added a `-g' (or `--group') flag that causes information to be printed about the specified group instead of the group's contents. (sort of like Unix's `ls -d'). The `-g' can be used in combination with `-r' to print information about the group and its contents.
* [svn-r1151] Changes since 19990318Robb Matzke1999-03-191-3/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./Makefile.in ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./config/commence.in ./config/conclude.in ./config/dec-osf4.x ./config/depend.in ./config/freebsd ./config/linux-gnu ./config/linux-gnulibc1 ./config/linux-gnulibc2 ./config/solaris2.x ./examples/Makefile.in ./src/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in ./tools/testh5dump.sh Changes that allow hdf5 to be configured and compiled in a directory other than the source directory. This is especially useful if you want to concurrently compile with different compilers and/or compile flags, or if the hdf5 source is on read-only media like a CDROM. The changes were surprisingly easy ;-) Here's what you can do now... $ mkdir /tmp/build1 # or something $ cd /tmp/build1 $ /cdrom/hdf5/configure # where ever the source is $ make Paul, you'll have to change the testh5toh4 script similar to the way I changed testh5dump.sh. I started working on it but then gave up because of a number of problems: (1) I had to comment out all the tests that let h5toh4 choose the output file name because it always tried to put the output file in the same directory as the input file, (2) if path names are used during the h4 dump then they interfere with the diff. The test works fine when run in the source directory, but try this instead: $ gunzip <hdf5-1.1.67.tar.gz |tar xf - $ chmod -R ugo-w hdf5-1.1.67 $ mkdir build $ cd build $ ../hdf5-1.1.67/configure $ make check Dan, I didn't modify the pablo/Makefile.in because I have no way to test it. I think all you need to do is add a couple lines before the @COMMENCE@ line and add a couple search directories for header files. Anyway, it seems like almost an exact duplicate of the src/Makefile.in, so it shouldn't be a problem... ./Makefile.in Removes a few more temporary files during make clean and distclean. ./configure.in I fixed the creation of the time-stamp files so that the initial make doesn't have to regenerated all the makefiles (only GNU make users will see any change). ./src/H5R.c Changed a return type from `intn' to `int' for an API function. ./src/H5detect.c Added the volatile qualifier to a couple more variables. ./tools/h5tools.c Fixed a compiler warning about an unused local. ./tools/h5toh4.c Initialized `optind' to 1 because it's zero on my system. It should always be one on a unix system. ./tools/testh5toh4 Redirected "broken pipe" messages to /dev/null so outut is formatted correctly.
* [svn-r1149] ./configure.inRobb Matzke1999-03-181-7/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5private.h Temporarily commented out the code that tries to link a simple MPI-IO application because I'm not sure how to pass $LDFLAGS and $LIBS to the compiler. Removed the `--enable-parallel=ibm' switch because the library we link with is either -lmpcc or -lmpcc_r but not both. The only way to tell is to see what compiler was specified (mpcc or mpcc_r) but if that compiler is specified then we don't need any libraries (the compiler script supplies them). That leaves just two choices: the user must use a compiler script: CC=mpcc ./configure or the user must state which library is desired: LDFLAGS='-lmpcc' ./configure --enable-parallel Checks for <setjmp.h>, longjmp(), and signal(). We don't check for setjmp() because it could be a macro (in fact, Posix requires it to be a macro) and if longjmp() is present then setjmp() is probably present too ;-) ./src/H5detect.c The alignment detection loop uses SIGBUS and setjmp/longjmp instead of fork/wait in order to get around bugs with forking in conjunction with mpich. This hasn't been tested on the SP-2 yet but it does work on the DEC Alpha. ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in Changed the order that libraries are linked so -lhdf5 is always before $LDFLAGS.
* [svn-r1115] Changes since 19990302Robb Matzke1999-03-031-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./INSTALL ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] Improvements for parallel library. If you have a properly working mpicc you should be able to just say: $ CC=mpicc ./configure and you will see checking for mpirun... /usr/local/mpi/bin/mpirun checking for parallel support files... skipped checking how to run on one processor... /usr/local/mpi/bin/mpirun -np 1 checking how to run in parallel... /usr/local/mpi/bin/mpirun -np $$NPROCS To quote from the INSTALL file.... *** Parallel vs. serial library The HDF5 library can be configured to use MPI and MPI-IO for parallelizm on a distributed multi-processor system. The easy way to do this is to have a properly installed parallel compiler (e.g., MPICH's mpicc or IBM's mpcc) and supply that executable as the value of the CC environment variable: [NOTE: mpcc is not tested yet] $ CC=mpcc ./configure $ CC=/usr/local/mpi/bin/mpicc ./configure If no such wrapper script is available then you must specify your normal C compiler along with the distribution of MPI/MPI-IO which is to be used (values other than `mpich' will be added at a later date): $ ./configure --enable-parallel=mpich If the MPI/MPI-IO include files and/or libraries cannot be found by the compiler then their directories must be given as arguments to CPPFLAGS and/or LDFLAGS: $ CPPFLAGS=-I/usr/local/mpi/include \ LDFLAGS=-L/usr/local/mpi/lib/LINUX/ch_p4 \ ./configure --enable-parallel=mpich If a parallel library is being built then configure attempts to determine how to run a parallel application on one processor and on many processors. If the compiler is mpicc and the user hasn't specified values for RUNSERIAL and RUNPARALLEL then configure chooses `mpirun' from the same directory as `mpicc': RUNSERIAL: /usr/local/mpi/bin/mpirun -np 1 RUNPARALLEL: /usr/local/mpi/bin/mpirun -np $${NPROCS:=2} The `$${NPROCS:=2}' will be substituted with the value of the NPROCS environment variable at the time `make check' is run (or the value 2). ./testpar/Makefile.in Saying `make check' (or `make test') will run the tests on two processors by default. If you define NPROCS then that many processors are used instead: $ NPROCS=4 make check ./configure.in Fixed (hopefully) bugs with detecting whether __attribute__ and __FUNCTION__ are special keywords for the compiler. ./Makefile.in Saying `make install' from the top level directory shows instructions for using shared libraries. ./config/commence.in ./src/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in Moved the @top_srcdir@ into the makefiles because it was expanded too early and had the wrong value. ./INSTALL Added a warning that if the wrong version of hdf4 tools are installed then `make check' will fail in the tools directory.
* [svn-r1112] Changes since 19990301Robb Matzke1999-03-021-12/+15
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./INSTALL Reorganized and added some additional examples. ./MANIFEST ./aclocal.m4 [NEW] ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./bin/ltconfig [NEW] ./bin/ltmain.sh [NEW] Added tests to determine how to compile shared libraries and how to link programs with them before the libraries are installed. Also how to install and uninstall shared libraries. The configure step also prints the names of the config files it's trying to load for easier debugging. ./bin/config.guess ./bin/config.sub Replaced with a newer version from GNU. The changes we made to that file to report `irix6.x' and `FreeBSD' without version numbers have been incorporated into configure.in instead. In the future, do not change these two files (see the top of configure.in instead). By the way, this update was required to get shared libraries working. ./config/linux [REMOVED] ./config/linux-gnulibc1 [NEW] ./config/linux-gnu [NEW] ./config/alpha-dec [REMOVED] ./config/alpha-dec-osf4.0 [REMOVED] ./config/dec-osf4.x [NEW] ./config/irix5.3 [REMOVED] ./config/irix5.x [NEW] ./config/irix64 [REMOVED] ./config/freebsd Moved config files around to agree with output from the new config.guess. The linux file was split into gnu (RedHat), gnulibc1, and gnulibc2 versions. The alpha-dec file was removed (I think it was unused) and the alpha-dec-osf4.0 was changed to dec-osf4.x. The irix5.3 file renamed to irix5.x and the irix64 file was renamed to irix6.x. The freebsd file was changed to point to linux-gnulibc1. These changes were tested on: Linux 2.0 Linux 2.1 FreeBSD 3.2 Irix 5.3 Irix64 6.2 Irix64 6.4 HP/UX 10.20 OSF1 4.0 ./config/alphaev56-dec-osf4.x ./config/irix64 Added warnings similar to linux/freebsd about using compilers with known bugs. ./config/commence.in ./config/conclude.in ./src/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in Added definitions for shared libraries. This has been tested on the following systems: Linux 2.0 Linux 2.1 FreeBSD 3.2 Irix 5.3 Irix64 6.2 Irix64 6.4 HP/UX 10.20 static only OSF1 4.0 If you want to disable use of shared libraries (you probably do for development purposes since it takes a lot longer to compile and because you have to run dynamically linked programs in a special way if the library hasn't been installed) then add `--disable-shared' to the configure command line. This is all documented in the INSTALL file. ./bin/release Temprarily commented out the MANIFEST checking when running under svf since svf is about to be replaced by a newer version. This change only affects error checking during the release process. ./Makefile.dist ./Makefile.in Added `make check' which does the same thing as `make _test' since the former is endorsed by the GNU coding style and people are used to it. The old `make _test' still works too (and so does `make test' if you use GNU make).
* [svn-r942] PURPOSE:Paul Harten1998-11-211-2/+5
| | | | | | | | | | | | | | | | | | | | | | | | | New Feature SOLUTION: h5toh4 is an H5 utility which converts HDF5 files into HDF4 files. It converts only those H5 objects which have have mappings into H4 objects. Some H5 objects that may be converted into H4 objects are: 1) H5 group objects may be converted into H4 Vgroup objects. 2) H5 dataset objects of integer or floating point datatype may be converted into H4 SDS objects. 3) H5 dataset objects of compound datatype and rank 1 may be converted into H4 Vdata objects. Field members of the compound datatype are constrained to be single dimensional. Platforms tested: Solaris2.5, HP10.20
* [svn-r914] Changes since 19981113Robb Matzke1998-11-161-16/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./config/conclude.in ./test/Makefile.in ./tools/Makefile.in The Makefile $TESTS variable has finally been split into $TEST_PROGS and $TEST_SCRIPTS with the latter being the names of shell scripts that need to be run with `/bin/sh'. Now we don't have to copy each shell script before we run it. NOTE: THIS CHANGE DOES NOT AFFECT THE PABLO MAKEFILE SINCE THAT FILE IS A COPY OF A PREVIOUSLY GENERATED MAKEFILE. ./src/Makefile.in Added H5Snone.c to the source list. ./src/H5G.c Plugged a memory leak by emptying the object type "isa" table when the library is closed. ./src/H5Tconv.c ./src/H5Tpkg.h Added 48 new type functions to take advantage of hardware for integer type conversions. These functions are not registered in the conversion table yet because I haven't fully tested them. ./src/H5Tpkg.h Removed __unused__ qualifiers from prototypes.
* [svn-r907] Changes since 19981111Robb Matzke1998-11-131-15/+30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./INSTALL Added instructions about specifying a path for GNU zlib and HDF4 headers and library. Added comments for each of the tool names. Added h5toh4 as a tool name. ./configure.in ./conigure [REGENERATED] ./src/H5config.h.in [REGENERATED] The config/* scripts get invoked with $CC_BASENAME set the base name of the compiler in order to make it easier to handle setting compiler flags for different compilers in a big case statement. For instance, if $CC has the value /usr/local/mpi/bin/mpicc -ansi -64 then $CC_BASENAME will be `mpicc'. The $CC_BASENAME is not set if $CC is not set. Fixed alignment in `configure --help'. An include and/or library path can be specified for GNU zlib if configure can't find it in normal places. The "normal" means wherever your compiler normally searches, including search paths you've added through environment variables like CPPFLAGS and LDFLAGS. The INSTALL file has instructions. The `-ljpeg' library is detected. If `ssize_t' is not found then a #define is added to H5config.h similar to what we already do for `size_t'. We detect the hdf5 header file `mfhdf.h' and libraries `-lmfhdf' and `-ldf' and if found define the H5TOH4 and TESTH5TOH4 Makefile variables. The user can specify an include and/or library path. The INSTALL file has instructions. The `RUNTEST' variable has been split into `RUNSERIAL' and `RUNPARALLEL' because these are different commands. The makefile still uses `RUNTEST', which defaults to the RUNSERIAL value. The new testpar/Makefile.in sets RUNTEST to the RUNPARALLEL value. The default RUNSERIAL value is empty and the default RUNPARALLEL value is `mpirun -np 2'. These can both be overridden in the config/* files. To make the value the empty string set it like `RUNPARALLEL=none' in the config/* file. The new testpar/Makefile is generated from testpar/Makefile.in ./config/commence.in Added the RUNSERIAL and RUNPARALLEL makefile definitions. ./src/Makefile.in The `H5detect' program is run with RUNSERIAL, which is empty on all platforms except intel-osf1 (ASCI/Red) ./config/conclude.in Removed the `.c.a:' implicit rule -- we don't use it any more. ./config/BlankForm ./config/alpha-dec ./config/alpha-dec-osf4.0 ./config/freebsd2.2.7 ./config/hpux10.20 ./config/hpux9.03 ./config/intel-osf1 ./config/irix5.3 ./config/irix6.2 ./config/irix64 ./config/linux ./config/powerpc-ibm-aix4.2.1.0 ./config/rs6000-ibm-aix4.1.4.0 ./config/solaris2.5 All of these files have been updated to hande multiple compilers. Most of them assume `cc' if CC is not set. The documentation in `BlankForm' has been updated and documentation in the other files refer to `BlankForm'. The intel-osf1 uses LDFLAGS instead of LIBS to specify the extra library search paths. ./examples/Makefile.in ./test/Makefile.in ./tools/Makefile.in Simplified by grouping some dependency information together more succinctly. The tools Makefile.in has been modified to work with the `h5toh4' and `testh5toh4' programs. Until Paul checks these in you may have problems compiling. If so, just create files h5toh4.c and testh5toh4.c that contain: #include <stdio.h> int main(int argc, char *argv[]) { fprintf(stderr, "%s: not implemented\n", argv[0]); return 1; } ./src/H5public.h Removed definition for `ssize_t' since this is now handled by configure in H5config.h with a #define. ./MANIFEST ./testpar/Makefile.in [NEW] Added a makefile for parallel tests. As soon as we get this working properly we can remove the other four makefiles in that directory and maintain just one.
* [svn-r861] Set RUNTEST to /bin/sh because the test is actually a shell ↵Albert Cheng1998-11-021-0/+2
| | | | | | script file. Updated development version too.
* [svn-r753] Changes since 19981008Robb Matzke1998-10-131-1/+1
| | | | | | | | | | | | | | | | | | ---------------------- ./src/H5F.c ./src/H5Fprivate.h ./src/H5G.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5Gpublic.h ./test/istore.c ./test/tstab.c Removed CWG functionality. ./tools/Makefile.in Added `_test' where I added `test' last week. Maybe now the snapshots will start up again...
* [svn-r735] Changes since 19981002Robb Matzke1998-10-051-0/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5D.c Fill values are working for contiguous datasets now except there are two things that need more support from the data space layer, specifically the ability to form a selection from the difference of two selections. They are (1) extending an external contiguous dataset, (2) optimization by delaying the fill until after the first H5Dwrite(). Renamed H5D_allocate() to H5D_init_storage() since allocation is only part of the story. Added a data space argument so it doesn't have to query the space from the object header -- the space is always available in the caller anyway. Removed `#ifdef HAVE_PARALLEL' from a few places where it wasn't necessary. We don't need it around code that doesn't compile anything from mpi.h or mpio.h. ./src/H5Fistore.c Uncommented H5F_istore_alloc() for non-parallel and moved the `#ifdef HAVE_PARALLEL' just around Kim's barrier. ./src/H5Fmpio.c Wrapped a couple long lines. Got rid of two signed vs. unsigned comparison warnings. ./MANIFEST ./test/Makefile.in ./test/fillval.c [NEW] Added tests for fill values. The contiguous dataset extend test is disabled until H5S_SELECT_DIFF is implemented. ./tools/Makefile.in Fixed a bug where `make test' didn't build the executables first. This should cause the snapshots to start up again. ./Makefile.in Changed to build in `test' directory before `tools' directory. We want the library tests to pass before we even start considering the tools. You can still build and/or test the tools independent of the library tests passing.
* [svn-r725] Added the testh5dump test back into the automatic test.Albert Cheng1998-09-251-1/+4
| | | | | | | | During make test, it copies the master copy testh5dump.sh to a temperary copy, testh5dump and run it. Make clean remove only duplicated version, not the original master. Platform test: baldric.
* [svn-r668] Tempory turned off the automatic test.Ruey-Hsia Li1998-09-041-1/+1
|
* [svn-r666] Added TESTS entries to Makefile.in for automatic tests.Ruey-Hsia Li1998-09-031-0/+3
| | | | Initial version of testh5dump.sh which runs the h5dump tests.
* [svn-r605] Added in h5dump tools created by Ruey-Hsia.Albert Cheng1998-08-191-3/+6
| | | | | | | | Renamed what was called h5dump.c to h5tools.c. Changed Makefile.in to reflect all the changes. (Make dependence is to be processed later.) Tested in Solaris 2.5
* [svn-r537] Changes since 19980722Robb Matzke1998-07-231-9/+16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
* [svn-r485] Changes since 19980710Robb Matzke1998-07-131-0/+32
---------------------- ./Makefile.in ./config/commence.in ./config/conclude.in ./config/depend.in ./src/Makefile.in ./test/Makefile.in Tests are no longer installed for `make install'. Added a new target `make tests' that builds the tests but doesn't run them. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] Added detection of fork() and waitpid(). If present the contants HAVE_FORK and HAVE_WAITPID will be defined in H5config.h. ./test/dtypes.c Minor tweaks for systems that don't have fork() or waitpid(). ./MANIFEST ./tools [NEW] ./tools/Makefile.in [NEW] ./tools/h5debug.c [NEW] ./tools/h5import.c [NEW] ./tools/h5ls.c [NEW] ./tools/h5repart.c [NEW] Added a tools directory and moved tools from the src directory to here.
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