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* [svn-r10517] Purpose:James Laird2005-03-311-6/+15
| | | | | | | | | | | | | | | | Bug fix Description: On some machines, $RUNSERIAL variable needs to be used to run tests. Set $RUNTESTS (which is used for non-parallel tests) to be $RUNSERIAL in configure.am. Also, since I was updating all Makefiles.in anyway, I updated commence.am to point to autotools installs in AFS instead of those on heping. Platforms tested: mir, sleipnir, modi4, copper
* [svn-r10511] James Laird2005-03-301-1/+6
| | | | | | | | | | | | | Purpose: "Bug fix" Description: Hardcoded Makefiles to use /bin/sh instead of letting configure detect shell automatically. This is what v1.6 does, and avoids problems on janus. Platforms tested: sleipnir, copper, modi4, mir
* [svn-r10475] Purpose:James Laird2005-03-291-0/+2
| | | | | | | | | | | | | | | | | Feature - conditional compilation Description: SRB file driver and tests are now compiled only when SRB is enabled (using --with-srb during configure). Solution: Added an automake conditional in configure.in, altered Makefiles.am in src and test directories to depend on that conditional. This should make a nice example for posterity to add conditionally compiled sources. Platforms tested: heping (only configure change)
* [svn-r10459] James Laird2005-03-281-0/+1
| | | | | | | | | | | | | | | | | Purpose: Added C++ wrapper for Packet Table API. Description: Added macro for high-level C++ library (LIBH5CPP_HL), which changes every Makefile.in. Added directories for high-level C++ library (though currently only Packet Table API is supported). Added both C++ source and tests. Platforms tested: sleipnir, mir, modi4 Misc. update:
* [svn-r10158] Purpose:James Laird2005-03-071-103/+239
| | | | | | | | | | | | | | | | | | | | | | Automake version upgrade Description: Upgraded automake version from 1.6.2 to 1.9.5. Changed bin/reconfigure script to use automake 1.9.5. Changed configure.in and Makefiles to use new FCFLAGS and FC variables instead of FFLAGS and F9X. Automake and configure should now do the lion's share of the work supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will be cleaned later). Altered how configure handles pmake; now root-level Makefile.in is processed by bin/reconfigure to have a .MAKEFLAGS target, since automake no longer allows us to define unused variables. Configure now always checks for C++ compiler even if it is not used, since automake thinks this is the Right Thing To Do and will break otherwise. Platforms tested: Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
* [svn-r10123] Purpose:Albert Cheng2005-03-021-3/+0
| | | | | | | | | | | | | | | | | | | | | | | Removed GASS configuration and software packages associated with it. The following software are no longer configurable. checking for main in -lcrypto... yes checking for SSL_get_version in -lssl... yes checking globus_common.h usability... yes checking globus_common.h presence... yes checking for globus_common.h... yes checking for globus_module_activate in -lglobus_common... yes checking for main in -lglobus_gass_cache... yes checking for main in -lglobus_gaa... yes checking for main in -lglobus_gss... yes checking for main in -lglobus_gss_assist... yes checking for main in -lglobus_io... yes checking for main in -lglobus_gass_transfer_assist... yes checking for main in -lglobus_gass_transfer... yes checking for globus_gass_open in -lglobus_gass_file... yes Platforms tested: h5committested (but copper was down.) tested in modi4 too.
* [svn-r10066] Purpose:James Laird2005-02-231-0/+4
| | | | | | | | | | Libtool upgrade Description: HDF5 was using libtool 1.4.2. Upgraded to libtool 1.5.14. Platforms tested: verbena, heping, pommier, copper, modi4, arabica
* [svn-r10027] Purpose:Xiaowen Wu2005-02-171-0/+1
| | | | | | | | | | | | | | New feature. Description: Add the scaleoffset internal library filter. Solution: Platforms tested: heping, copper, arabica Misc. update:
* [svn-r10016] James Laird2005-02-161-1/+0
| | | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: modi4 dies during build with strange errors. The root cause of these is a two-year-old hack in HDF5's libtool script that only takes effect on IRIX. Solution: Edited the libtool hack (by editing ltmain.sh) to correct a bug in the hack. Also made sure that compiler-specific DEFAULT_LIBS are used when linking. Platforms tested: sleipnir, copper, modi4, sol
* [svn-r9988] Purpose:James Laird2005-02-111-19/+4
| | | | | | | | | | | | | | | | | | | | Bug fix Description: pmake (on modi4, for instance) complains about undefined variables if it is run without the -V flag, which turns those errors to warnings. Solution: Added test to configure.in to see if $MAKE will allow Makefiles with undefined variables. If not, sets -V flag in AM_MAKEFLAGS. Ensured that all custom make targets use AM_MAKEFLAGS. Also defined all variables that caused errors in top-level Makefile.am. This means that pmake can be used to build hdf5 *from the top level only*. To run make from a subdirectory, still need to use -V flag (or use make or gmake). Platforms tested: modi4, heping, copper, sleipnir
* [svn-r9930] James Laird2005-02-031-1/+1
| | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: Parallel builds were breaking in tools/lib Solution: talign didn't realize it depended on libh5tools.la because its dependencies listed the full path (../../tools/lib/libh5tools.la). Changed this, and made similar changes in a couple of other directories. This checkin should also add the --foreign flag to every Makefile.in Platforms tested: sleipnir (minor change)
* [svn-r9928] Purpose:Quincey Koziol2005-02-031-1/+1
| | | | | | | | | | | | | New feature Description: Add basic code for new B-tree implementation. They don't do much yet, aren't hooked up to anything yet and the format may change, but I'd like to start getting them into the daily tests. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r9920] Purpose:James Laird2005-02-021-2/+3
| | | | | | | | | | | | | | | | | | | Bug fix Description: Found the permanant fix to automake/CVS dependency problem Solution: Added AM_MAINTAINER_MODE macro to configure.in. Now automake will never try to regenerate Makefiles, Makefiles.in, configure, H5config.h, etc. when they are out of date, nor will it print any warnings. Developers should be very very careful to use reconfigure script, and can add --enable-maintainer-mode flag to configure on heping to regenerate these files correctly. Platforms tested: heping sleipnir copper
* [svn-r9915] Purpose:James Laird2005-02-021-6/+6
| | | | | | | | | | | | | | | Bug fix Description: Configuration files' timestamps were incorrect. Solution: Update Makefiles.in. Also added correct paths to autotools on heping, so heping build should be able to re-generate configuration files even if they are still broken. Platforms tested: sleipnir
* [svn-r9912] Purpose:James Laird2005-02-011-87/+8
| | | | | | | | | | | | | | | | | Bug fix Description: Dependencies between configure files (aclocal, configure.in, configure, Makefiles.am and .in) are still causing Makefiles to try to run autotools during build. Solution: Committed all Makefiles.in to update their timestamps. As a temporary measure, forcibly prevented automake from running autotools during build by redefining the variables it uses. Platforms tested: sleipnir (No changes to Makefile content)
* [svn-r9907] Purpose:James Laird2005-02-011-0/+1
| | | | | | | | | | | | | Bug fix Description: Different compilers use different flags to include Fortran module files Solution: Changed boilerplate to use configure variable rather than hardcoded -M flag. Platforms tested: sleipnir, sol, copper
* [svn-r9902] Purpose:James Laird2005-02-011-102/+658
| | | | | | | | | | | | | | | Configuration feature Description: HDF5 now uses automake to generate Makefiles Solution: Makefile.in files are now generated from Makefile.am files. To reconfigure (after chaning a Makefile.am or configure.in): /bin/sh bin/reconfigure.sh Platforms tested: Many
* [svn-r9019] Purpose:Robert E. McGrath2004-08-051-1/+1
| | | | | | | | | | | | | | | | Adding new 'jam' utility Description: New utility, plus changes to makefiles Solution: See http://hdf.ncsa.uiuc.edu/RFC/Jam Platforms tested: verbena (fortran,C++), arabica, hirdls (SGI Irix64) Misc. update: Manifest will be done in next checkin.
* [svn-r7499] Purpose:Pedro Vicente Nunes2003-09-191-1/+1
| | | | | | | | | | | | added h5repack to the list of tools to make check Platforms tested: linux (small change) Misc. update:
* [svn-r7361] Description:Albert Cheng2003-08-141-2/+3
| | | | | | | | | | | | Updated the copyright notice--mostly by rearranging some text to make them consistent. Solution: Platforms tested: "h5committested"--sol is down, so, no SUn test. Misc. update:
* [svn-r7123] Purpose:Bill Wendling2003-06-301-2/+1
| | | | | | | | | | | | | | | | | Bug Fix Description: The SUBDIRS macro is now defined as "" in the config/commence.in file. We shouldn't have definitions of this macro before the inclusion of config/commence.in. Solution: Placed all definitions of SUBDIRS after config/commence.in inclusion. Platforms tested: Modi4 (Small fix yet again). Misc. update:
* [svn-r7121] Bill Wendling2003-06-301-21/+47
| | | | | | | | | | | | | | | | | | Purpose: Bug Fix Description: Changes needed to make "pmake" work on Modi4. Solution: Needed to add some null macro defines in the commence.in files. Needed to remove a dependence on LIBH5TEST in the fortran make since LIBH5TEST isn't used in the fortran stuff. Platforms tested: Modi4 (small change) Misc. update:
* [svn-r6583] Elena Pourmal2003-04-031-12/+4
| | | | | | | | | | | | | | | | | | | Purpose: New tool Description: Pankaj created h5import tool long time ago. I am finally checking the source code in for the 1.6 release. Known problems: h5import test will crash if srcdir option is used; will be fixed before the release. Solution: Platforms tested: vebena, arabica, modi4 were tested. h5import tests passed I also tested on arabica with srcdir option to make sure that there is a problem when srcdir is used. After that I disabled h5import tests. Daily tests will build h5import, but will not run h5import tests. Misc. update:
* [svn-r6542] Purpose:Bill Wendling2003-03-311-3/+11
| | | | | | | | | | | | Update Description: Updated copyright statement Platforms tested: None needed Misc. update:
* [svn-r5973] Purpose:Pedro Vicente Nunes2002-10-091-1/+1
| | | | | | | | | added h5fiff to configure and makefiles Platforms tested: linux 2.4.18
* [svn-r5074] Purpose:Bill Wendling2002-03-201-2/+2
| | | | | | | | | Code Motion Description: Removal of HDF4 from the configure/Makefiles. This is a precursor to the actual physical removal of the HDF4 tools from the HDF5 tree. Platforms tested: Arabica, Dangermouse
* [svn-r4759] Bill Wendling2001-12-301-1/+6
| | | | | | | | | | | | Purpose: Bug fix Description: The "make depend" command wasn't propagating down into the tools/ directories. Solution: Added the "depend:" part to the Makefile in the tools/ subdirectory. Platforms tested: Linux
* [svn-r4325] Bill Wendling2001-08-101-2/+3
| | | | | | | | | Purpose: New Feature Description: Adding the h5cc script thingy. Platforms tested: Linux
* [svn-r3919] Rushabh Doshi2001-05-121-1/+1
| | | | | | | | | | | | | | | | | | | | | Purpose: Adding new feature Description: Added gif2h5 and h52gif conversion utilities Solution: The utilites follow the framework built for the gif2hdf and hdf2gif utilities for hdf4. The main files modified were those that read the H5 file and those that write H5 file. In the future, if you wish to continue with the framework and extend it to .png or some other fileformat the main files to edit will be the gif reader and writer. One point to note with h52gif. You have to specify the exact location of the image and the palette that it links to. You can choose not to specify a palette (uniform grayscale chosen in this case) but you must specify image location. In the future, someone could edit the readhdf.c source to enable the reader to parse the hdf file and select all images with corresponding palettes. Platforms tested: modi4 , eirene , hawkwind , arabica , Ren (NT 4.0) , Personal box (win2k)
* [svn-r3535] Purpose:Bill Wendling2001-03-021-7/+7
| | | | | | | | | | Bug Fix Description: We weren't doing cleans or installs in the lib/ subdirectory. Solution: Added lib to the for loops. Platforms tested: LInux
* [svn-r3523] Purpose:Bill Wendling2001-02-271-3/+3
| | | | | | | | | | | Bug Fix Description: For some reason, it was trying to cd to the examples/ and pablo/ directories to do a distclean. Only problem was, they aren't here. Solution: Removed those from the `for' loop. Platforms tested: Linux
* [svn-r3508] Purpose:Bill Wendling2001-02-231-9/+3
| | | | | | | | | | | | Bug Fix Description: We were trying to build the talign test program before the library was actually built. Solution: Moved talign test to the lib directory since it belongs with the library anyway. Platforms tested: Linux
* [svn-r3497] Purpose:Bill Wendling2001-02-221-2/+2
| | | | | | | | | | Fix Description: Left some more cruft in there. Solution: Removed. I still need to check on the testing of `talign'... Platforms tested: Linux
* [svn-r3496] Purpose:Bill Wendling2001-02-221-1/+1
| | | | | | | | | | Fix Description: Left in the separate subdirectories fro the small programms. Solution: removed them and replaced with the misc/ subdirectory Platforms tested: Linux
* [svn-r3491] Purpose:Bill Wendling2001-02-221-68/+69
| | | | | | | | Code Movement Description: Changed so that it works for compiling files in a subdirectory. Platforms tested: Linux, Kelgia
* [svn-r3475] Purpose:Albert Cheng2001-02-201-2/+2
| | | | | | | | | | | Bug fix Description: h4toh5test was being installed because it was put in the PUB_PROGS which is specifically for public programs to be installed. Solution: Moved it away from the PUB_PROGS list to the PROGS list. Platforms tested: eirene.
* [svn-r3453] MuQun Yang2001-02-191-1/+1
| | | | | | | | | | | Purpose: Fixing Makefile.in for compiling h4toh5test.c at the right option Without including hdf4 lib, h4toh5test will not be generated. Description: Solution: Platforms tested: arabica
* [svn-r3451] Purpose:Bill Wendling2001-02-191-1/+1
| | | | | | | | | Feature Add Description: Added support for the h4toh5test program which needs to be conditionally compiled in only if HDF4 is specified. Platforms tested: Linux
* [svn-r3418] MuQun Yang2001-02-161-2/+5
| | | | | | | | | | | Purpose: add contents to compile h4toh5test.c Description: solution: handled similar as h5dumptst.c Platforms tested: Linux(eirene), sun 5.7(arabica)
* [svn-r2981] Purpose:Bill Wendling2000-11-201-2/+1
| | | | | | | | | | | | | Bug fix Description: If TESTH5TOH4 or TESTH4TOH5 wasn't set, then it would mess up the testing process by adding a ``#'' to the for statement (since there was a line-continuation in the definition of the macro). Solution: Placed the macro expansions all on one line so that there's no junk characters picked up by accident. Platforms tested: OSF1 (Gondolin)
* [svn-r2724] Purpose:Albert Cheng2000-10-241-1/+2
| | | | | | | | | | | | | | new feature Description: h5ls was not tested Solution: Added a test script, testh5ls.sh, to give h5ls some tests. Since the output from h5ls is sometime machine dependent (e.g., Datatypes), can not compare them with expected output. For now, run it against various hdf5 binary files. If it exits with 0, consider it passes. Platforms tested: IRIX64, eirene, arabica.
* [svn-r2682] Purpose:Albert Cheng2000-10-131-3/+3
| | | | | | | | | | Bug fix Description: gmake check had been failing because of errors in the Makefile. Solution: Fixed it so that libtools.a got build first. Platforms tested: Eirene (Linux)
* [svn-r2643] Purpose:Bill Wendling2000-10-091-7/+9
| | | | | | | | | | | | Adding Testing Description: Alignment when putting elements in a compound datatype can be off. Solution: This was a bug which I'd fixed. Here's a program to exercise the bug. Platforms tested: Linux
* [svn-r2613] MuQun Yang2000-09-281-5/+15
| | | | | | | | | | | | | | | | | Purpose: add h4toh5 converter tool Description: add flag h4toh5 and testh4toh5 in the Makefile. Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: test on eirene and arabica. [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r2419] Setup PUB_PROGS so that all tools but h5dumptst will be installed.Albert Cheng2000-06-271-1/+2
| | | | h5dumptst generates the test suits files. It is not a user tool.
* [svn-r2242] Removed h5dumputil.c. Its functions have been migrated to ↵Albert Cheng2000-05-111-3/+3
| | | | h5tools.c.
* [svn-r1934] Removed the entry of h5findshd.c. Its routines have been moved toAlbert Cheng2000-01-071-1/+1
| | | | libh5tools.c.
* [svn-r1802] Changes since 19991019Robb Matzke1999-11-011-2/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./configure.in ./configure [REGENERATED] Added more checking for `make' features. ./Makefile.in ./doc/Makefile.in ./doc/html/Makefile.in ./doc/html/Tutor/Makefile.in ./examples/Makefile.in ./pablo/Makefile.in ./src/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in ./config/commence.in ./config/conclude.in ./config/depend.in [REMOVED] ./config/depend1.in [NEW] ./config/depend2.in [NEW] ./config/depend3.in [NEW] ./config/depend4.in [NEW] ./config/dependN.in [NEW] The directory search stuff was moved into commence.in, thereby shortening the Makefile.in prologues. ./doc/html/Dependencies [NEW] ./doc/html/Tutor/Dependencies [NEW] ./examples/Dependencies [NEW] ./src/Dependencies [NEW] ./test/Dependencies [NEW] ./testpar/Dependencies [NEW] ./tools/Dependencies [NEW] The `.distdep' files were all renamed to `Dependencies' to make them more obvious. They are required (but may be empty) in every directory that has a Makefile.in that ends with @CONCLUDE@ (you'll get an obvious error from make if you forgot to create one). ./bin/trace ./src/H5.c Added H5E_major_t and H5E_minor_t although tracing only prints the integer value. ./src/H5E.c ./src/H5Epublic.h Added tracing information. ./src/H5FDcore.c ./src/H5FDfamily.c ./src/H5FDgass.c ./src/H5FDmpio.c ./src/H5FDsec2.c ./src/H5FDstdio.c Fixed places where FUNC_LEAVE() evaluated it's argument more than once. Added tracing information. Wrapped long lines. ./config/gnu-flags Fixed a syntax error when we don't have a gnu compiler.
* [svn-r1753] Changes since 19991007Robb Matzke1999-10-151-2/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./configure.in ./src/H5config.h.in [REGENERATED] The /usr/ncsa/{include,lib} directories are only added if they actually exist. This fixes a warning on some systems. Checks for the <pdb.h> header file and also for either the PDB or Silo library, and if found prepares to compile the pdb2hdf program. ./config/distdep Relative path names for include files are changed to base names since the makefile contains the logic for searching and since it's likely that building the .distdep files happed from a location other than where they would be used in the file system. ./config/conclude.in Fixed shell errors when `for' loops iterate over nothing for the `uninstall' target. ./src/H5D.c ./src/H5Oefl.c File names for the external files are added to the heap when the dataset is created instead of when the object header is written. This fixes a rare infinite recursion bug. ./src/H5FD.c ./src/H5FDpublic.h Optimization to the free list causes H5FD_alloc() usage to go from >10 seconds to <0.4 second for one example (converting a 30MB equation of state file from PDB to HDF5 format). The optimization is to simply keep track of the largest item in the free list and not search the free list when the largest item is not big enough to satisfy the request. ./src/H5FDcore.c ./src/H5FDcore.h ./test/h5test.c If the `backing_store' property is true then a flush causes the entire contents of memory to be written to the specified file. This is in preparation for the ASCI/red optimizations and is currently tested by the pdb2hdf `--cached' switch. ./src/H5Odtypes.c Wrapped three long lines. ./tools/Makefile.in ./tools/pdb2hdf.c [NEW] A PDB-to-HDF5 translator. It only translates meta data -- the resulting HDF5 points into the PDB file for the raw data.
* [svn-r1515] Changes since 19990715Robb Matzke1999-07-191-18/+19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./Makefile.in [1.3] ./examples/Makefile.in [1.3] ./pablo/Makefile.in [1.3] ./src/Makefile.in [1.3] ./test/Makefile.in [1.3] ./testpar/Makefile.in [1.3] ./tools/Makefile.in [1.3] ./config/commence.in [1.3] ./config/conclude.in [1.3] ./config/depend.in [1.3] Added a `.PATH' target for Irix pmake which is identical to the VPATH used by most other `make' programs. Irix 6.5 (or 6.4?) and later `make' ignores VPATH. Started all beginning-of-line comments with `##' instead of just `#' because Irix `pmake' barfs on things like the following because it sees the `# if' as a directive: # make will barf on the following line # if running Irix pmake ./config/commence.in [1.3] Added empty definitions for optional `make' macros because Irix pmake complains if it sees a macro which has never been defined. The main body of the Makefiles can redefine these macros to whatever they need.
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