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* Split tools into src and test - remove foldersAllen Byrne2016-10-271-607/+0
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* [svn-r30285] Description:Quincey Koziol2016-08-131-4/+5
| | | | | | | | | More warning cleanups, bringing the build down to 25 unique types of warnings, with 550 warnings in 122 files (down from 28, 770, and 134). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30113] Description:Quincey Koziol2016-06-281-1/+1
| | | | | | | | Clean up warnings (from 2774 -> 1560, with my standard debug build) Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r25081] Bug HDFFV-8625, HDFFV-8639, HDFFV-8745:Albert Cheng2014-04-221-0/+7
| | | | | | | | | | | | h5diff issues "unable to read attribute" error message when comparing two files Description: h5diff did not handle attributes of variable length strings correctly. It created the wrong memory type if one but not both compared attributes are of the variable strings type. It ended in H5Aread() failure. Solution: We decided to treat the case when one type is variable length string and the other is not as incomparable. That bypassed the above error. We still need to figure out the proper way, if possible, to compare variable string with non-variable string types. Tested: h5committested plus tested in Swallow (OS X 10.8).
* [svn-r24376] Updated all code to use HDmalloc, HDcalloc, and HDfree.Dana Robinson2013-10-311-1/+1
| | | | | | | | | | | | | Prep work for adding a memory free function, part of HDFFV-8551. Tested on: 32-bit LE linux (jam) * with C++, Fortran * with thread safety on These are minor changes (almost entirely renaming foo functions to HDfoo) that don't change functionality. This should not require a full commit test.
* [svn-r24138] Cast constants to specified type. Allen Byrne2013-09-131-3/+4
| | | | | | | | Cast smaller vars to larger type. Cast calculation result to correct type. Changed int member to hbool_t Tested: local linux
* [svn-r22004] Reduced warnings and fixed conflicts resulting from including ↵Allen Byrne2012-02-281-2/+3
| | | | | | h5tools.h Tested: local linux
* [svn-r21981] Correct HD prefix in tools for fprintfAllen Byrne2012-02-241-3/+3
| | | | Checked for HD support.
* [svn-r21979] Correct HD prefix in tools for strlen and memcpyAllen Byrne2012-02-241-3/+3
| | | | Checked for HD support.
* [svn-r21396] Purpose:Jonathan Kim2011-09-161-1/+4
| | | | | | | | | | | | | | | | | | | | HDFFV-7693 - h5diff produces different behavior between versions: 1.8.3 and 1.8.6 Description: There were two issues on this. One was not displaying all the comparable objects if non-comparable object/attribute exist and compared before comparables ones. This issue occurred after 1.8.4 release. This is the issue from user. The other issue was not displaying all the comparable attributes, if non-comparable object/attribute exist and compared ahead. This issue were exist even before 1.8.4 release. So it's possible some attribute comparison may have not displayed correctly in the past, if non-comparable data were exist in common object. Fixed h5diff to display all the comparable object and attribute regardless of non-comparables. Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam, Windows)
* [svn-r21195] Correct windows exports for h5diff.Allen Byrne2011-08-081-40/+8
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* [svn-r21072] Purpose:Jonathan Kim2011-07-071-91/+116
| | | | | | | | | | | | Work for HDFFV-7600 - GMQS: h5diff - argument options -d, -p and --use-system-epsilon should be mutually exclusive. Description: Fixed h5diff to display instructive error message and exit with 1 when mutually exclusive options (-d, -p and --use-system-epsilon) are used together. Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
* [svn-r20427] Purpose:Jonathan Kim2011-04-061-3/+3
| | | | | | | | | | | | Fixed Bug 2184 - GMQS: h5diff - incorrect calculation code for --use-system-epsilon option Description: Additional check in from the previous checkin r20424. Updated help page again. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20424] Purpose:Jonathan Kim2011-04-061-1/+2
| | | | | | | | | | | | Fixed Bug 2184 - GMQS: h5diff - incorrect calculation code for --use-system-epsilon option Description: Additional check in from the previous checkin r20384. Updated help page. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20384] Purpose:Jonathan Kim2011-03-311-9/+3
| | | | | | | | | | | | | | | | | | Fixed Bug 2184 - GMQS: h5diff - incorrect calculation code for --use-system-epsilon option Description: Merged from HDF5 1.8 branch r20369. Fixed h5diff for --use-system-epsilon option: the calculation changed from ( |a - b| / b ) to ( |a - b| ). This was decided for better performance and was corrected only in HDF5 trunk, so 1.8 got updated. Also comments for equal_XXX() function were updated correctly. Also help page and RM got updated correctly. Also add test cases for testing the differences w/wo the option. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE)
* [svn-r20334] Purpose:Jonathan Kim2011-03-251-1/+10
| | | | | | | | | | | | | | | Fixed CHICAGO: Bug 2121 - h5diff - incorrect and lack of output for the different set of attributes (different number and names) Description: This is related to previous checkin r20294. Add help page update for verbose option level feature, which displays useful information about attribute difference with -v1, --verbose=1 -v2 or --verbose=2 option. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20294] Purpose:Jonathan Kim2011-03-221-3/+37
| | | | | | | | | | | | | | | | Fixed CHICAGO: Bug 2121 - h5diff - incorrect and lack of output for the different set of attributes (different number and names) Description: Previously h5diff compared attributes correctly only when two objects have the same number of attributes and attribute names are identical. This fix covers all other cases. Also didn't display useful information about attribute difference. This fixes both issues. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20186] Verify/cleanup code due to debugging changesAllen Byrne2011-03-041-1/+1
| | | | Tested: local linux
* [svn-r19491] Purpose:Jonathan Kim2010-09-291-0/+24
| | | | | | | | | | Update help page for exclude-path feature. Description: Related to "1890: h5diff excluding object for file comparison via command line" checkins. (r19406) Tested: jam, amani, heiwa
* [svn-r19406] Purpose:Jonathan Kim2010-09-161-0/+38
| | | | | | | | | | | Add --exclude-path option Description: Specified path to an object will be excluded from comparing the two files or two groups. If group is specified all the member objects will be excluded. Related to "1890: h5diff excluding object for file comparison via command line" Tested: jam, amani and heiwa
* [svn-r19400] Purpose:Jonathan Kim2010-09-161-10/+21
| | | | | | | | | | Fix for Bug1975 h5diff - support recursive comparison on group when specified as an object Description: Compare member objects and groups recursively when two files or groups are specified to be compared. Support parallel diff and handling symbolic links accordingly. Tested: jam, amani, heiwa
* [svn-r18873] Purpose:Jonathan Kim2010-05-211-6/+6
| | | | | | | | | | | Rename '--follow-links' to '--follow-symlinks' Description: The '--follow-links' option is to follow symbolic links (soft and external). Make the name more intuitive and specific to the feature. Tested: jam, amani and linew
* [svn-r18759] pull r18757 from 1.8 branchAllen Byrne2010-05-111-6/+2
| | | | | | | | | Enable tools lib to be built as a dll on windows. Added two get/set functions for progname and d_status. Also add windows import/export declarations to functions. Updated error_mesg() and warn_mesg() to remove progname argument and use get functions Tested: Windows, linux
* [svn-r18266] Purpose:Jonathan Kim2010-02-161-45/+73
| | | | | | | | | | | | | | | bugzilla 1754: h5diff: support comparing through links. (original check-in svn revision #18164) Description: fix the hang issue in parallel mode when compare external-link. add --no-dangling-links option. add test cases (#450-#459) relate to the new option. improve test script to check exit code. update --help relate to the new options. correct some indentations. Tested: h5committest (jam, amani and linew)
* [svn-r18197] Description:Quincey Koziol2010-01-301-4/+4
| | | | | | | | | Trim trailing whitespace from source code files with this command: find . \( -name "*.[ch]" -or -name "*.cpp" -or -name "*.f90" \) -print |xargs -n 1 sed -i "" 's/[[:blank:]]*$//' Tested on: None - eyeballed only
* [svn-r18164] Purpose:Jonathan Kim2010-01-251-1/+6
| | | | | | | | | | | | | | | Add a feature to compare through links. Relate to bugzilla report 1754. Description: Currently, h5diff command only compares the name(path) of target object not the actual data. With this feature, h5diff will go through the link(s) and figure out the actual object at the end of the link and compare data if exist. Internally we have hard-link, soft-link, external-link (as part of user_defined-link). This feature will provide a user transparent experience when comparing link objects as the user can specify any of those 3 type of links to be compared in any combination. Tested on Jam.
* [svn-r17466] " Use strict equality as defaultPeter Cao2009-09-111-14/+32
| | | | | | " Use "--use-system-epsilon" for system EPSILON " Use "-p" or "-d" for whatever user's choice of epsilon " Use "-p 0" or "-d 0" for strict equality (same as default)
* [svn-r16560] Description:Quincey Koziol2009-03-101-6/+9
| | | | | | | | | | Remove another call to H5E_clear_stack() from within the library. Clean up lots of compiler warnings. Tested on: Mac OS X/32 10.5.6 (amazon) (followup on other platforms forthcoming)
* [svn-r16434] bug fix: typo in usage messagePedro Vicente Nunes2009-02-051-1/+1
| | | | tested: linux
* [svn-r16348] #1368 (E1) h5diff: implement "not comparable" messages. ↵Pedro Vicente Nunes2009-01-261-6/+15
| | | | | | | | Implemented RFC. The new option is <-c, --compare List objects that are not comparable> added some test cases tested: windows, linux
* [svn-r16300] Added an option to avoid dealing with NaNs Pedro Vicente Nunes2009-01-131-1/+10
| | | | | | | -N, --nan Avoid NaNs detection Note: there is no shell script run for datasets with NaN because the output is non portable (different results and NaN strings for different systems) Tested: windows, linux
* [svn-r15988] Merge with 1.8 up to rev 15871Pedro Vicente Nunes2008-10-291-1/+4
| | | | | | Regarding h5diff, h5copy Tested: linux
* [svn-r15987] Merge with 1.8 rev 15871Pedro Vicente Nunes2008-10-291-12/+4
| | | | | | Eliminate -c option and make that behavior the default and return 2 instead of -1 on error status tested: linux
* [svn-r15628] Description:Quincey Koziol2008-09-161-29/+29
| | | | | | | | | | | | | Remove trailing whitespace from C/C++ source files, with the following script: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Tested on: Mac OS X/32 10.5.5 (amazon) No need for h5committest, just whitespace changes...
* [svn-r15428] http://bugzilla.hdfgroup.uiuc.edu/show_bug.cgi?id=1170Pedro Vicente Nunes2008-08-041-8/+26
| | | | | | | | | | Summary: when using h5diff to compare the results of h5repack (or other tools that copy one HDF5 file to another), a new option is needed to allow h5diff to make an "absolute" comparison of the 2 files. This is the "contents" mode explained in the usage below. If this mode is present, objects in both files must match (must be exactly the same). If this does not happen, the tool returns an error code of 1 (instead of the success code of 0) Changes to the h5repack test script: the call to h5diff was changed to include -c (maintaining the previous -q). tested: windows, linux, solaris
* [svn-r14380] Eliminate old code not used and that was replaced (command line)Pedro Vicente Nunes2008-01-071-308/+73
| | | | tested: windows, linux
* [svn-r14267] enhancement: formatted h5diff usage Pedro Vicente Nunes2007-11-191-19/+29
| | | | tested: linux
* [svn-r14264] new features: 1) new usage for h5diff " A la" h5dump formatPedro Vicente Nunes2007-11-161-0/+69
| | | | | | 2) new usage for h5repack and new command line parsing using the tools library parsing code tested: windows, linux, solaris
* [svn-r14258] new feature: make h5diff use the same command line parsing code ↵Pedro Vicente Nunes2007-11-131-15/+184
| | | | | | | | | and syntax than h5dump usage is now h5diff [OPTIONS] file1 file2 [obj1[obj2]] tested: windows, linux, solaris
* [svn-r14221] Pedro Vicente Nunes2007-10-301-1/+1
| | | | | | | | bug fix: avoid a segmentation fault when number of arguments is just one solution: test if number of arguments is more than 1 tested: windows, linux
* [svn-r14216] add a -V version information for h5diffPedro Vicente Nunes2007-10-221-0/+13
| | | | tested: windows, linux
* [svn-r13805] Pedro Vicente Nunes2007-05-241-1/+0
| | | | | | Early detection of no arguments, print usage and exit Tested: linux
* [svn-r13391] code cleaning and formated usage messagePedro Vicente Nunes2007-02-261-4/+4
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* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r13033] Pedro Vicente Nunes2006-12-071-12/+17
| | | | avoid usage to call exit(1), it makes processes to stop in parallel.
* [svn-r13027] Pedro Vicente Nunes2006-12-061-19/+20
| | | | | | | | fixed warning ../../../hdf5/tools/h5diff/h5diff_common.c: In function `usage': ../../../hdf5/tools/h5diff/h5diff_common.c:346: warning: function might be possible candidate for attribute `noreturn'
* [svn-r13003] Pedro Vicente Nunes2006-12-011-2/+2
| | | | | | | | Cleaned warnings h5diff_array.c:804: warning: passing arg 1 of `fabs' as floating rather than integer due to prototype introduced double precision arithmetic when possible instead of single precision
* [svn-r12980] Pedro Vicente Nunes2006-11-271-1/+1
| | | | | changed the usage message relative to the relative error formula to a more common and easy to understand form | (b-a) / a |
* [svn-r12815] Pedro Vicente Nunes2006-10-251-1/+1
| | | | | | | | | | | | | | 1) added a new parameter to the h5diff function diff_array that contains the beginning position of the hyperslab, so that the total position in the array is printed correctly when reading by hyperslabs. 2) added a new test to h5diff that reads and diffs by hyperslabs. The test reads a 1GB dataset, from which a 1KB hyperslab was written with differences . 3) added the generation of 2 files to the generator program to test the h5diff hyperslab read. 4) changed the h5diff binary pre-generated file names to be more descriptive (e.g, instead of file1.h5, made it h5diff_basic1.h5) 5) changed the name of the h5repack options text file to info.h5repack
* [svn-r12687] reverted back some changes that inadvertedely added some ↵Pedro Vicente Nunes2006-09-261-3/+1
| | | | | | | | output to the parallel part of h5diff tested : heping parallel
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