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* [svn-r11042] Purpose:Quincey Koziol2005-07-071-7/+7
| | | | | | | | | | | | | | | | | | Bug fix Description: The ".chksh" file for a test script was being created in the "source" location rather than the build location. This can cause problems when multiple builds are running because "slower" machines will see the ".cshsh" file from faster machines and will not run the test script as they should. Solution: Use 'basename' command to strip off the path of the script and create the ".chksh" file in the build location. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11034] Purpose:Albert Cheng2005-07-071-4/+2
| | | | | | | | | | | | | | | | | bug fix. Description: -nt is not a universal option for the test command in all platforms. The use of it in conclude.am cause some platforms to bark at the Makefile generated. Solution: Created a command script bin/newer which tests if file1 is newer than file2. Replace the "test file1 -nt file2" by "newer file1 file2". Platforms tested: Tested in sol.
* [svn-r11013] Purpose:James Laird2005-07-011-7/+7
| | | | | | | | | | | | | | | | | | Bug fix Description: Fixed bugs that caused tests to be unable to find testhdf5.sh during daily tests, and another that broke sol and shanti. Solution: When tests are run, their path is ./$testname . When scripts are run, their path has no leading "./". Fixed. Sol and shanti don't recognize the -e option for test, but they do know -f. Fixed. Also modified release notes. Platforms tested: mir, shanti, heping
* [svn-r11008] Purpose:James Laird2005-06-302-92/+84
| | | | | | | | | | | | | | | | | | | | | | Feature: tests now use parallel make and only run once Description: When make is invoked in parallel (using the -j option), several tests will now be run simultaneously. This should speed up testing on a number of systems. When a test passes, it creates a foo.chkexe or foo.chksh file, which prevents the test from running again unless the test or library changes. Solution: Most of the changes live in config/conclude.am. Added *.chkexe and *.chksh files to the list of files to be cleaned at "make mostlyclean" time. Parallel tests still run one at a time, but use the same make instructions as serial tests. Platforms tested: mir, eirene, sleipnir, pommier, copper, modi4 (some errors occurred, probably due to the test being run before updating hdf5. Will re-run tests after checkin.)
* [svn-r10858] Purpose:Albert Cheng2005-06-041-4/+15
| | | | | | | | | | | bug fix. Description: The check-s and check-p targets are not recursively passes down. Make them so. Platforms tested: heping (serial and pp).
* [svn-r10849] Purpose:Albert Cheng2005-06-021-1/+3
| | | | | | | | | | | | | | | | | | bug fix Description: check-s and check-p were set as pre-requistics of test. They would get executed in parallel if parallel make is used. This could cause problems since serial tests are used to be executed before parallel tests. It is not known if it is always okay to run serial and parallel tests in simultantously. Solution: Change check-s and check-p as actions of the target test so that they get executed sequnentially. Platforms tested: heping PP.
* [svn-r10840] Purpose:James Laird2005-06-021-6/+36
| | | | | | | | | | | Added check-s and check-p targets. Description: Added check-s and check-p targets to 1.7 branch to match changes to 1.6 branch. Now parallel and serial tests can be run separately. Platforms tested: mir, modi4, copper
* [svn-r10739] Purpose:Pedro Vicente Nunes2005-05-091-0/+9
| | | | | | | | | | | | | | new test Description: adds a new test for a case when there is more than 1 stripmine read Solution: Platforms tested: Linux Misc. update:
* [svn-r10680] Purpose:MuQun Yang2005-04-271-1/+1
| | | | | | | | | | | | | | H5Pset_scaleoffset API is changed due to addition of the floating-point filter Description: Only add a parameter, nothing should change for the tool. Solution: Platforms tested: Linux 2.4 Misc. update:
* [svn-r10637] Purpose:Quincey Koziol2005-04-213-11/+67
| | | | | | | | | | | | Bug fix/code cleanup Description: Add tests to determine that very long (64K+) object names are working. Fixed a couple of bugs in h5dump where they weren't... Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10570] Purpose: MaintenanceElena Pourmal2005-04-071-4/+0
| | | | | | | | | | | Description: Removed support for SRB driver Solution: Removed or modified appropriate files; ran reconfigure to regenerate Makefile.in and configure files. Platforms tested: heping and shanti Misc. update: ran bin/chkmanifest on heping
* [svn-r10534] Purpose:James Laird2005-04-041-0/+1
| | | | | | | | | | | | | | | | | | | | Configuration feature Description: Different Fortran compilers mangle function names in different ways (upper case, lower case, adding underscores). To link between Fortran and C functions, we need to know what a given function's name is under a given compiler. Solution: Use autoconf's FC_WRAPPERS check to determine the Fortran naming scheme and define the FC_FUNC_ macro to name our functions (in H5f90proto.h). Removed references to our old FNAME macro, as well as flags that indicated whether function names were upper or lower case. Platforms tested: mir, pommier, modi4, copper, more
* [svn-r10517] Purpose:James Laird2005-03-311-6/+15
| | | | | | | | | | | | | | | | Bug fix Description: On some machines, $RUNSERIAL variable needs to be used to run tests. Set $RUNTESTS (which is used for non-parallel tests) to be $RUNSERIAL in configure.am. Also, since I was updating all Makefiles.in anyway, I updated commence.am to point to autotools installs in AFS instead of those on heping. Platforms tested: mir, sleipnir, modi4, copper
* [svn-r10511] James Laird2005-03-301-1/+6
| | | | | | | | | | | | | Purpose: "Bug fix" Description: Hardcoded Makefiles to use /bin/sh instead of letting configure detect shell automatically. This is what v1.6 does, and avoids problems on janus. Platforms tested: sleipnir, copper, modi4, mir
* [svn-r10475] Purpose:James Laird2005-03-291-0/+2
| | | | | | | | | | | | | | | | | Feature - conditional compilation Description: SRB file driver and tests are now compiled only when SRB is enabled (using --with-srb during configure). Solution: Added an automake conditional in configure.in, altered Makefiles.am in src and test directories to depend on that conditional. This should make a nice example for posterity to add conditionally compiled sources. Platforms tested: heping (only configure change)
* [svn-r10459] James Laird2005-03-281-0/+1
| | | | | | | | | | | | | | | | | Purpose: Added C++ wrapper for Packet Table API. Description: Added macro for high-level C++ library (LIBH5CPP_HL), which changes every Makefile.in. Added directories for high-level C++ library (though currently only Packet Table API is supported). Added both C++ source and tests. Platforms tested: sleipnir, mir, modi4 Misc. update:
* [svn-r10158] Purpose:James Laird2005-03-071-151/+256
| | | | | | | | | | | | | | | | | | | | | | Automake version upgrade Description: Upgraded automake version from 1.6.2 to 1.9.5. Changed bin/reconfigure script to use automake 1.9.5. Changed configure.in and Makefiles to use new FCFLAGS and FC variables instead of FFLAGS and F9X. Automake and configure should now do the lion's share of the work supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will be cleaned later). Altered how configure handles pmake; now root-level Makefile.in is processed by bin/reconfigure to have a .MAKEFLAGS target, since automake no longer allows us to define unused variables. Configure now always checks for C++ compiler even if it is not used, since automake thinks this is the Right Thing To Do and will break otherwise. Platforms tested: Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
* [svn-r10130] Purpose:Albert Cheng2005-03-031-4/+0
| | | | | | | Retired GASS driver. Platforms tested: H5committested.
* [svn-r10123] Purpose:Albert Cheng2005-03-021-3/+0
| | | | | | | | | | | | | | | | | | | | | | | Removed GASS configuration and software packages associated with it. The following software are no longer configurable. checking for main in -lcrypto... yes checking for SSL_get_version in -lssl... yes checking globus_common.h usability... yes checking globus_common.h presence... yes checking for globus_common.h... yes checking for globus_module_activate in -lglobus_common... yes checking for main in -lglobus_gass_cache... yes checking for main in -lglobus_gaa... yes checking for main in -lglobus_gss... yes checking for main in -lglobus_gss_assist... yes checking for main in -lglobus_io... yes checking for main in -lglobus_gass_transfer_assist... yes checking for main in -lglobus_gass_transfer... yes checking for globus_gass_open in -lglobus_gass_file... yes Platforms tested: h5committested (but copper was down.) tested in modi4 too.
* [svn-r10066] Purpose:James Laird2005-02-231-0/+4
| | | | | | | | | | Libtool upgrade Description: HDF5 was using libtool 1.4.2. Upgraded to libtool 1.5.14. Platforms tested: verbena, heping, pommier, copper, modi4, arabica
* [svn-r10060] Purpose:Robert E. McGrath2005-02-213-1/+37
| | | | | | | | | | | | | | feature Description: h5dump support for scaleoffset compression Solution: Platforms tested: verbena, shanti,copper64 Misc. update:
* [svn-r10035] Purpose: Bug fixRaymond Lu2005-02-171-2/+9
| | | | | | | | | | Description: On SGI Altix(cobalt) Linux, wrong values were printed out for enum data type members. No apparent reason was discovered. Solution: use another pointer to the buffer containing the member value. It seems fix the problem. Platforms tested: cobalt - simple change, where the bug was discovered.
* [svn-r10027] Purpose:Xiaowen Wu2005-02-171-0/+1
| | | | | | | | | | | | | | New feature. Description: Add the scaleoffset internal library filter. Solution: Platforms tested: heping, copper, arabica Misc. update:
* [svn-r10016] James Laird2005-02-161-1/+0
| | | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: modi4 dies during build with strange errors. The root cause of these is a two-year-old hack in HDF5's libtool script that only takes effect on IRIX. Solution: Edited the libtool hack (by editing ltmain.sh) to correct a bug in the hack. Also made sure that compiler-specific DEFAULT_LIBS are used when linking. Platforms tested: sleipnir, copper, modi4, sol
* [svn-r9993] Purpose:James Laird2005-02-112-2/+2
| | | | | | | | | | | | | | | | | | | | Bug fix Description: Arabica exhibited strange errors when linker found wrong versions of header files. This happened because include directories were given to linker in the wrong order. Solution: Move include directories from AM_CFLAGS variable to INCLUDES variable to put them before CPPFLAGS variable. Trust me, it works. This bug may also have contributed to strange errors on other platforms (kelgia?). Platforms tested: copper, sleipnir, arabica. (h5dump broke while building on arabica, but this happened in a clean checkout, too).
* [svn-r9989] Purpose:Robert E. McGrath2005-02-113-0/+30
| | | | | | | | | | | | | | | Feature Description: Adding support for NBIT compression to dumper Solution: Platforms tested: arabica, verbena, copper64 Misc. update:
* [svn-r9988] Purpose:James Laird2005-02-111-15/+4
| | | | | | | | | | | | | | | | | | | | Bug fix Description: pmake (on modi4, for instance) complains about undefined variables if it is run without the -V flag, which turns those errors to warnings. Solution: Added test to configure.in to see if $MAKE will allow Makefiles with undefined variables. If not, sets -V flag in AM_MAKEFLAGS. Ensured that all custom make targets use AM_MAKEFLAGS. Also defined all variables that caused errors in top-level Makefile.am. This means that pmake can be used to build hdf5 *from the top level only*. To run make from a subdirectory, still need to use -V flag (or use make or gmake). Platforms tested: modi4, heping, copper, sleipnir
* [svn-r9961] Pedro Vicente Nunes2005-02-081-3/+15
| | | | | | | | | | | | | | | | | | | | | | | Purpose: bug fix, new test file Description: h5dump was not properly displaying array indices > 3D Solution: added the same algorythm and data structure that h5diff uses to calculate the array index from a element number position Platforms tested: linux solaris Misc. update:
* [svn-r9951] Purpose: Minor bug fix.Raymond Lu2005-02-071-14/+44
| | | | | | | | | | | | | Description: The byte order for all 1-byte integer types was fixed as little-endian even on a big-endian machine. This's corrected in h5detect.c. When types are only 1 byte long, a native int is used substitute the type to detect byte order. Some tools like h5dump and h5repack are also corrected in this case. Platforms tested: fuss, copper, sol.(There're some failures from the recent configure change). Misc. update: Information in the RELEASE.txt.
* [svn-r9930] James Laird2005-02-031-1/+1
| | | | | | | | | | | | | | | | | | Purpose: Bug fix Description: Parallel builds were breaking in tools/lib Solution: talign didn't realize it depended on libh5tools.la because its dependencies listed the full path (../../tools/lib/libh5tools.la). Changed this, and made similar changes in a couple of other directories. This checkin should also add the --foreign flag to every Makefile.in Platforms tested: sleipnir (minor change)
* [svn-r9928] Purpose:Quincey Koziol2005-02-031-1/+1
| | | | | | | | | | | | | New feature Description: Add basic code for new B-tree implementation. They don't do much yet, aren't hooked up to anything yet and the format may change, but I'd like to start getting them into the daily tests. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r9921] Purpose:Pedro Vicente Nunes2005-02-021-1/+1
| | | | | | | | | | | | | | | bug fix Description: the test fail condtion of a close function was set to if H5Dclose < 1 Solution: set to < 0 Platforms tested: linux Misc. update:
* [svn-r9920] Purpose:James Laird2005-02-021-2/+3
| | | | | | | | | | | | | | | | | | | Bug fix Description: Found the permanant fix to automake/CVS dependency problem Solution: Added AM_MAINTAINER_MODE macro to configure.in. Now automake will never try to regenerate Makefiles, Makefiles.in, configure, H5config.h, etc. when they are out of date, nor will it print any warnings. Developers should be very very careful to use reconfigure script, and can add --enable-maintainer-mode flag to configure on heping to regenerate these files correctly. Platforms tested: heping sleipnir copper
* [svn-r9915] Purpose:James Laird2005-02-021-6/+6
| | | | | | | | | | | | | | | Bug fix Description: Configuration files' timestamps were incorrect. Solution: Update Makefiles.in. Also added correct paths to autotools on heping, so heping build should be able to re-generate configuration files even if they are still broken. Platforms tested: sleipnir
* [svn-r9912] Purpose:James Laird2005-02-011-87/+8
| | | | | | | | | | | | | | | | | Bug fix Description: Dependencies between configure files (aclocal, configure.in, configure, Makefiles.am and .in) are still causing Makefiles to try to run autotools during build. Solution: Committed all Makefiles.in to update their timestamps. As a temporary measure, forcibly prevented automake from running autotools during build by redefining the variables it uses. Platforms tested: sleipnir (No changes to Makefile content)
* [svn-r9907] Purpose:James Laird2005-02-011-0/+1
| | | | | | | | | | | | | Bug fix Description: Different compilers use different flags to include Fortran module files Solution: Changed boilerplate to use configure variable rather than hardcoded -M flag. Platforms tested: sleipnir, sol, copper
* [svn-r9902] Purpose:James Laird2005-02-013-172/+762
| | | | | | | | | | | | | | | Configuration feature Description: HDF5 now uses automake to generate Makefiles Solution: Makefile.in files are now generated from Makefile.am files. To reconfigure (after chaning a Makefile.am or configure.in): /bin/sh bin/reconfigure.sh Platforms tested: Many
* [svn-r9778] Purpose:Quincey Koziol2005-01-081-1/+2
| | | | | | | | | | | | | | | Remove feature Description: Retire threaded, balanced binary tree code from HDF5 use. Requiescat in pace... Also, regenerate dependencies files. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Too minor to require full h5committesting (the code is already disconnected from everything except its tests)
* [svn-r9747] Purpose:Xuan Bai2005-01-051-0/+1
| | | | | | | | | | | | | | | | | | | Bug fix. Description: When building h5dumpgentest.c with Visual C++ 6.0, I got the following warning message: h5dumpgentest.c(4528) : warning C4013: 'h5tools_can_encode' undefined; assuming extern returning int Solution: Add the header file h5tools.h into h5dumpgentest.c. Platforms tested: Heping (Linux) Visual C++ 6.0 on Windows XP/2000. .NET on Windows XP. (Tested with SZIP-with-encoder and SZIP-without-encoder). Misc. update:
* [svn-r9727] Purpose:Quincey Koziol2004-12-294-344/+34
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r9542] Purpose:Albert Cheng2004-11-182-0/+35
| | | | | | | | | | | | | | | | | | | Bug fix (#264) Description: h5dump did not print attribute data in ASCII format when -r is used. Solution: Added the ability to print in ASCII for Attributes Data also. Added a test for printing Attributes with -r option. Platforms tested: H5committested. Also in heping. Misc. update: Update MANIFEST.
* [svn-r9495] Purpose:Robert E. McGrath2004-11-021-10/+10
| | | | | | | | | | | | Fix SZIP filter to dynmically detect encoder. Description: Solution: See: http://hdf.ncsa.uiuc.edu/RFC/SZIP/Szip_dynamic_12_Oct.pdf Changes to h5dump tests, contingent on detecting SZIP encoder.
* [svn-r9370] Purpose:Quincey Koziol2004-10-062-89/+69
| | | | | | | | | | | | | | | Refactor code Description: Refactor common code for determining the native type for using in the tools into separate routine. Also, reduce diffs between the two branches and bring back some fixes from the development branch to the release branch. Platforms tested: FreeBSD 4.10 (sleipnir) too minor to require h5committest
* [svn-r9364] Raymond Lu2004-10-051-3/+24
| | | | | | | | | | | | Purpose: change feature Description: Back up support bitfield and time datatypes in H5Tget_native_type.Leave it to future support. Let it return "not supported" error message for now. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r9234] Purpose:Quincey Koziol2004-09-091-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Tweak recent "forward compatibility" changes to the H5E* API (which allowed for the old H5E API functions to remain unchanged) by allowing for the error stack callback function (H5E_auto_t) to also remain unchanged from the 1.6 branch. This required changing the H5E{get|set}_auto routines to have the old style H5E_auto_t type (which didn't have a stack ID parameter) and the new H5E{get|set}_auto_stack routines to have a newer "H5E_auto_stack_t" type (which has a stack ID parameter). This should make the H5E API changes as forwardly compatible as possible. One side-affect of this change was that it was impossible to determine if the current auto error callback was the old style (H5E_auto_t) or the new style (H5E_auto_stack_t) of callback, so a new API function (H5Eauto_is_stack) was adde to query this. Platforms tested: FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modi4) h5committest
* [svn-r9183] Purpose: New featureRaymond Lu2004-09-011-12/+3
| | | | | | | | | | | | Description: Restore 6 old error API functions back to the library to be backward compatible with v1.6. They are H5Epush, H5Eprint, H5Ewalk, H5Eclear, H5Eset_auto, H5Eget_auto. These functions do not have error stack as parameter. Solution: Internally, these functions use default error stack. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r8983] Purpose:Quincey Koziol2004-08-021-89/+89
| | | | | | | | | | | | Update dependencies Description: Update dependencies after config/depend1.in bugfix Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel IRIX64 6.5 (modi4) h5committested
* [svn-r8852] Purpose:Pedro Vicente Nunes2004-07-092-29/+84
| | | | | | | | | | | | | | | | h5dump new tests Description: added new tests for the print of array indices (nested objects, several ranks) Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8826] Purpose:Pedro Vicente Nunes2004-07-073-133/+122
| | | | | | | | | | | | | | | | | | h5dump new tests Description: added more tests for the escape/not escape feature for string data (with vlen, with compound, with char data) Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8813] Purpose:Pedro Vicente Nunes2004-07-061-1/+1
| | | | | | | | | | | | | | bug fix Description: one run from the tests had a wrong dataset name Solution: Platforms tested: linux (small ) Misc. update:
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