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* [svn-r24194] Don't add hdf5 library dependencies to lib files when ↵Larry Knox2013-09-241-0/+1
| | | | | | --disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276. Tested with h5committest and on hdf-duck.
* [svn-r24167] HDFFV-8513, HDFFV-8522 Plugin testing in h5repack, h5dump.Allen Byrne2013-09-191-13/+24
| | | | | | | Add more usage info for UserMacros. Add new option information about the Plugin default path. Tested: local linux, jam
* [svn-r24124] HDFFV-8345: Changed usage txt to use dsetN instead ofletters ↵Allen Byrne2013-09-112-79/+42
| | | | | | for objects in examples. Tested: local linux
* [svn-r24120] HDFFV-8345: plugin test properly checks static-exec result to ↵Allen Byrne2013-09-103-4/+6
| | | | | | include test. Tested: jam
* [svn-r24118] Comment out test until configure sets conditional correctlyAllen Byrne2013-09-091-1/+1
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* [svn-r24116] Correct indentation and create single exit point.Allen Byrne2013-09-094-3426/+3270
| | | | Tested : local linux
* [svn-r24104] HDFFV-8345: add User Defined filters to h5repack.Allen Byrne2013-09-0618-539/+2082
| | | | | | Reviewed in H5T-61 Tested: local linux - cmake and autotools
* [svn-r24066] Eliminate switch default warning by printing err message.Allen Byrne2013-08-231-1/+3
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* [svn-r24053] HDFFV-8498: --minimum option was disabled by HDFFV-8214. ↵Allen Byrne2013-08-213-7/+56
| | | | | | | | Reverted code change and changed default to 0 from 1024. Changed limit test to use h5dump to compare repacked file instead of h5diff. Corrected test scripts for test folder path Tested: h5committest and local linux with CMake
* [svn-r24050] HDFFV-8498: --minimum option was disabled by HDFFV-8214. ↵Allen Byrne2013-08-215-4/+180
| | | | | | Reverted code change and changed default to 0 from 1024. Changed limit test to use h5dump to compare repacked file instead of h5diff. Tested local linux with CMake
* [svn-r24029] Move TESTS to seperate file to allow easier editing by all ↵Allen Byrne2013-08-192-936/+938
| | | | | | developers. Tested: local linux
* [svn-r24011] Description:Quincey Koziol2013-08-151-1/+1
| | | | | | | | Clean up a few warnings Tested on: Mac OSX 10.8.4 (amazon) w/C++ & FORTRAN (too minor to require h5committest)
* [svn-r23964] Corrected "continuous" layout to "contiguous in h5repack -h ↵Larry Knox2013-08-022-2/+2
| | | | | | | | output and comment. Jira issue HDFFV-8493. No test - text only change.
* [svn-r23745] HDFFV-8461: Add Windows /MT supportAllen Byrne2013-06-101-0/+3
| | | | This adds the UserMacros.cmake support needed.
* [svn-r23460] Add missing infile assignment and error countsAllen Byrne2013-03-261-3/+19
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* [svn-r23407] Purpose: Jonathan Kim2013-03-203-10/+24
| | | | | | | | | | | | | HDFFV-8214 - h5repack failed converting small chunked dataset (size < 1K) to contiguous layout. Description: h5repack failed converting small chunked dataset (size < 1K) to contiguous layout. The first case was when chunk dim is bigger than the dataset dim (at leat one), h5repack failed with displaying error stacks. The other case is when chunk dim is smaller than the dataset dim, h5repack failed to change layout. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), emu (solaris-BE),fred (mac64-LE), Windows (32-LE cmake), cmake (jam)
* [svn-r23306] HDFFV-8311: Correct test dependencyAllen Byrne2013-02-201-153/+204
| | | | Tested: local linux
* [svn-r23305] HDFFV-8257: szip still used even if headers are not found. ↵Allen Byrne2013-02-181-1/+1
| | | | | | Change configure to test the result of the CHECK HEADERS call before checking for the library. Tested: local linux, h5committest
* [svn-r23289] HDFFV-8311: Correct test dependencyAllen Byrne2013-02-151-170/+227
| | | | Tested: local linux
* [svn-r23160] HDFFV-8227: Mac DARWIN requires CMake 2.8.10Allen Byrne2013-01-141-1/+1
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* [svn-r22908] Reverted changes in revision 22819Larry Knox2012-10-161-2/+0
| | | | Tested with h5committest on jam, koala and ostrich.
* [svn-r22819] Added H5BLD_STATIC and HDF5_USE_SHLIB to configure.ac so that ↵Larry Knox2012-09-271-0/+2
| | | | | | if configured with --disable-static the default for HDF5_USE_SHLIB in the compile scripts will be changed to yes. This is a fix for HDFFV-8141, where the compile scripts try to link to non-existant static hdf5 libraries. Tested on jam,koala,ostrich(h5committest) and other THG machines.
* [svn-r22805] Purpose:Jonathan Kim2012-09-246-22/+143
| | | | | | | | | | | | | HDFFV-8012 - h5repack changes max dims and cause failure if only "-f none" is used without changing layout for chunked dataset when a chunk dim is bigger than a dataset dim Description: "h5repack -f <obj>:NONE <file.h5> out.h5" command failed if source file contains chunked dataset and a chunk dim is bigger than a dataset dim. Another issue is that the command changed max dims if chunk dim is smaller than the dataset dim. These issue occurred when dataset size is smaller than 64k (compact size limit) Fixed them. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), cmake (jam)
* [svn-r22720] Fix RelWithDebInfo packagingAllen Byrne2012-08-281-1/+1
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* [svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of ↵Allen Byrne2012-08-232-21/+19
| | | | | | autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files. Tested: h5committest
* [svn-r22706] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, ↵Larry Knox2012-08-221-39/+93
| | | | | | libtool 2.4.2 Tested THG machines.
* [svn-r22646] Description:Quincey Koziol2012-08-082-2/+2
| | | | | | | | | Changes resulting from Klocwork static analysis tool, from Mark Miller @ LLNL (miller86@llnl.gov). Tested on: Mac OS X/64 10.7.4 (amazon) w/debug, C++ & FORTRAN, using gcc 4.7.x (too minor to require h5committest)
* [svn-r22617] Purpose:Jonathan Kim2012-08-011-6/+17
| | | | | | | | | | | | | | | Fix for HDFFV-8107 testh5diff will fail if build/test in HDF5 source tree Description: This is sub-task for "HDFFV-8105 testh5diff.sh uses the wrong operator (-a) in an if statement." From the HDFFV-8105's update, h5diff test failed if build&test is performed in HDF5 source tree because 'cp' try to copy test files to self dir. It's addressed by skipping if cp's src dir and dest dir is same. Also this applied for all other tools under src/tools dir. No change to the CMakeLists.txt files because CMake cautions/demands that in-source builds be avoided. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), some manual tests as well
* [svn-r22479] Remove subfolder tools from install commandAllen Byrne2012-06-201-2/+2
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* [svn-r22405] HDFFV-8018: add INSTALL commands for packaging the pdb files ↵Allen Byrne2012-05-241-0/+3
| | | | | | for windows when configured with RelWithDebInfo Tested: local linux and Windows
* [svn-r22373] Purpose: Jonathan Kim2012-05-161-5/+10
| | | | | | | | | | | | | Fix h5repacktst (test file generating binary) to address HDFFV-8016 h5repacktst failed in AIX 32bit mode Description: Segmentation fault occurred when h5repacktst try to generate a dataset when system memory is limited to 256MB. Add error handling to display apporiate message to exit and adjust the test dataset according to the original size which didn't causing out of memory. Tested: test was done by limit memory in csh. jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE)
* [svn-r22277] Purpose:Jonathan Kim2012-04-119-23/+232
| | | | | | | | | | | | Fix for HDFFV-7993 - h5repack fails with error "chunk size must be <= maximum dimension size for fixed-sized dimensions" Description: Fixed a failure when change the chunk size of a specified chunked dataset with unlimited max dims. Also took care of converting to contiguous and compact from the dataset. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22247] Added new files and tests to CMakeLists.txtAllen Byrne2012-04-041-7/+63
| | | | Tested: local linux
* [svn-r22240] Description:Quincey Koziol2012-04-021-2/+2
| | | | Update comment about metadata block size test.
* [svn-r22238] Added comment to explain why FNAME4 is used and cautioned other ↵Albert Cheng2012-04-021-0/+2
| | | | | | files may not work.
* [svn-r22224] Description:Quincey Koziol2012-04-012-14/+19
| | | | | | | | | Clean up a few warnings and use constant values for free-space parameters for the metadata block size test. Tested on: Linux/64 2.6.18 (koala) w/production & szip (h5committested also)
* [svn-r22221] Description:Quincey Koziol2012-04-011-4/+4
| | | | | | | | Small code cleanup while tracking down h5repack issue. Tested on: Mac OSX/64 10.7.3 (amazon) w/debug (h5committest coming up)
* [svn-r22220] Feature: HDFFV-7981Albert Cheng2012-03-311-0/+20
| | | | | | Added test to verify h5repack --metadata option produces bigger size file. Tested: h5committest (koala, jam, ostrich).
* [svn-r22214] Feature: HDFFV-7981Albert Cheng2012-03-301-6/+54
| | | | | | Added test to verify h5repack --metadata option produces bigger size file. Tested: h5committest (koala, jam, ostrich).
* [svn-r22181] Description:Quincey Koziol2012-03-291-2/+2
| | | | | | | Correct typo in test file name. Tested on: Mac OSX/64 10.7.3 (amazon) w/debug
* [svn-r22180] Description:Quincey Koziol2012-03-296-120/+110
| | | | | | | | | Add new "metadata block size" command line option ('-M <x>' or '--metadata_block_size=<x>') for h5repack. Tested on: Mac OSX/64 10.7.3 (amazon) w/debug) (h5committest upcoming)
* [svn-r22170] Removed extraneous svn executable properties from ↵Dana Robinson2012-03-281-0/+0
| | | | non-executable files.
* [svn-r22024] Add HD prefix to tools library based tests. Cleaned ↵Allen Byrne2012-03-051-15/+15
| | | | | | allocation/free in tests. Tested: local linux/ changes h5committetest against 1.8 version
* [svn-r22012] Purpose:Jonathan Kim2012-03-011-57/+269
| | | | | | | | | | | | | | | | Task for HDFFV-7862 - Select data by chunk direction to improve performance in h5repack Description: h5repack sometimes became very slow when handling big chunked datasets in certain cases. (when chunk boundary doesn't match with a hyperslab boundary.) The main issue was from figuring out a hypeslab without considering chunk boundary to read from and write to such datasets. The update was made to figure out a better hyperslab unit with considering chunk boundary to improve performance for such cases prior to the update. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows
* [svn-r22005] function calls must be after assignments on windowsAllen Byrne2012-02-291-5/+6
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* [svn-r22004] Reduced warnings and fixed conflicts resulting from including ↵Allen Byrne2012-02-287-143/+148
| | | | | | h5tools.h Tested: local linux
* [svn-r21994] Add tools_init to mainAllen Byrne2012-02-271-0/+5
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* [svn-r21993] Add tools_init to mainAllen Byrne2012-02-271-0/+3
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* [svn-r21985] Tools must call h5tools_init before command_line parsing or ↵Allen Byrne2012-02-241-0/+3
| | | | | | | | using tools_mesg functions. Tools library uses alais variables for stdout, stderr and tools library uses HDfprintf() functions. Tested: local linux
* [svn-r21982] Correct HD prefix in tools for exitAllen Byrne2012-02-244-41/+41
| | | | Checked for HD support.
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