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* [svn-r29309] HDFFV-9698, HDFFV-9241, HDFFV-9570: Merge fixes from trunk for ↵Allen Byrne2016-03-074-22/+22
| | | | subsetting index, default fill value display, and optional arg crash. Also some minor compiler warnings fixes.
* [svn-r28382] CMake 3.4 policy changeAllen Byrne2015-11-171-24/+24
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* [svn-r28125] Add library version changes based on lt_vers.am file.Allen Byrne2015-10-191-5/+3
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* [svn-r27659] HDFFV-9515: repack failed with 5 digit filter ids because a ↵Allen Byrne2015-09-011-478/+478
| | | | | | local variable in the parse routine was not large enough. Tested: local linux and windows
* [svn-r27532] Merge of CMake dual-binary changes from CMake branch to 1.8Allen Byrne2015-08-192-45/+32
| | | | Tested: local linux (CMake branch has been tested on Windows)
* [svn-r27165] Merge 27133 & 27158 from trunk:Mohamad Chaarawi2015-06-082-2/+2
| | | | | | | | | - Add a new attribute function characterstic for format: * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r26954] Remove src temporary debug build props.Allen Byrne2015-04-281-2/+2
| | | | Move TOOLS option up before usage.
* [svn-r26752] Merged r26750 and r26751 from trunk.Albert Cheng2015-04-074-0/+13
| | | | | | | | | HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in compound type. Added the testing to h5repack where it belongs. Undo the tests added to h5dump. Tested: h5committested plus tested in jam by hand.
* [svn-r26728] Merge trunk reviwions 26669 and 26670.Larry Knox2015-04-041-1/+0
| | | | | | Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure. Tested h5committest
* [svn-r26700] Generators are only built staticAllen Byrne2015-04-011-3/+3
| | | | Plugin test for disable state does not print error stack and does not print FAILED
* [svn-r26697] HDFFV-9131: Remove obsolete/unneeded sections.Allen Byrne2015-04-011-2/+0
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* [svn-r26696] Merge from trunkAllen Byrne2015-04-011-101/+29
| | | | Tested local linux cmake
* [svn-r26600] Fix CMake target calls to add new parameterAllen Byrne2015-03-261-4/+4
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* [svn-r26582] Merge r26509 from trunkJerome Soumagne2015-03-251-2/+0
| | | | Run reconfigure after merges from autotools_rework branch
* [svn-r26573] merge 24270 from trunk, introducing NORETURN.Mohamad Chaarawi2015-03-251-1/+1
| | | | tested with h5committest.
* [svn-r26407] Missed an H5_HAVE_FILTER_SHUFFLE line.Dana Robinson2015-03-091-1/+1
| | | | | | Part of: HDFFV-9086 Tested on: jam (minor change)
* [svn-r26395] Merges r26329 from trunkDana Robinson2015-03-093-178/+28
| | | | | | | | | | | | | | Removed the configure option that allows selective disabling of individual internal filters (fletcher32, shuffle, etc.). This feature mucked up the code with a lot of #ifdefs, saved very little space and was not scalable to a general scheme for library size reduction. We've decided to remove the feature while we investigate a more general scheme for decreasing the library size. Fixes: HDFFV-9086 Tested on: h5committest
* [svn-r26371] Update cmake mininum versionAllen Byrne2015-03-051-1/+1
| | | | Update windows wix cpack process.
* [svn-r26314] Brought autotools related changes from the trunk to the branch, ↵Scot Breitenfeld2015-02-261-1/+2
| | | | r26188 r26280
* [svn-r26304] bring 26303 from trunk:Mohamad Chaarawi2015-02-251-2/+2
| | | | remove files with .clog2 extension generated by MPE when doing make clean
* [svn-r26224] merge 26180 from trunk:vms_last_support_1_8Mohamad Chaarawi2015-02-181-1/+0
| | | | | | | | | | configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch: - Remove Infering parallel compilers (C and Fortran) from configure.ac - Remove restriction to build shared with parallel - Cleanup parallel sections in configure.ac - remove large file support checks - MPE fixes.
* [svn-r25497] Description:Quincey Koziol2014-07-304-39/+40
| | | | | | | | | | Merge changes that correspond to the 64-bit ID changes (without the actual switch to 64-bit IDs) to the 1.8 release branch. (Plus a few minor cleanups and alignments with the trunk that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r25402] Bring 25397/8 from trunk:Mohamad Chaarawi2014-07-101-1/+0
| | | | | | | - remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today. - fix bug in t_mpi.c (HDFFV-8856) tested with h5committest.
* [svn-r25222] Merge cmake_ext_mod into 1.8Allen Byrne2014-05-272-9/+9
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* [svn-r25111] Changed Subeversion EOL and executable properties. No code changes.Dana Robinson2014-04-251-3/+3
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* [svn-r25106] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-251-1/+0
| | | | | | | | back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
* [svn-r24980] HDFFV-8290: Merge automake 1.14.1 changes from trunkAllen Byrne2014-04-072-77/+443
| | | | Tested: h5committest
* [svn-r24906] Merge latest CMake changes from trunk.Allen Byrne2014-03-265-416/+508
| | | | Tested: local linux
* [svn-r24894] Description:Quincey Koziol2014-03-251-104/+95
| | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r24869 & r24875 from trunk to 1.8 branch: Clean up more compiler warnings, plus merge a few Coverity bug fixes from the hdf5_1_8_coverity branch back to the trunk: r20877: Purpose: Fix coverity issue 1723 Description: Modified test_generate in hl/test_image to close file "f" before exit, even if an error occurs. r20879: Issue 63: change check of return of H5Tget_nmembers to <=0. No need to go futher if call fails as well as empty. r20881: Coverity #659 in Run 46: I changed the Line 442 where it tries to check whether FLAG_PRINTED is TRUE. But it had just been set to FALSE. I took out the condition check in the print statement. Tested on: Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & Parallel (daily tested on trunk)
* [svn-r24878] Description:Quincey Koziol2014-03-241-1/+0
| | | | | | | | | | | | | | | | | | | | | Bring r24864 from trunk to 1.8 branch: Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial (daily tested on trunk)
* [svn-r24746] Merge trunk revision 24744 from cmake branch includes;Allen Byrne2014-02-275-0/+155
| | | | | | HDFFV-8505: UD filter changes to remove filters in h5repack. Tested: local linux
* [svn-r24732] Fix for reconfigure, which fails because ↵Larry Knox2014-02-221-0/+1
| | | | | | LT_ADD_LIBHDF5_DEPENDENCY is used in Makefiles but the declaration in configure.ac is missing. Copied declaration from trunk. Tested with h5committest on jam ostrich koala and platypus(cmake).
* [svn-r24680] Remove acknowledgment file from install.Allen Byrne2014-02-035-73/+88
| | | | | | | Remove obsolete CPack.cmake file. Merge h5repack and h5mkgrp test folder changes from trunk. Tested: local linux
* [svn-r24395] Missed script file for cleanupAllen Byrne2013-11-011-0/+17
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* [svn-r24393] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-1/+18
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autotools
* [svn-r24205] Merge HDFFV-8513/8522 from trunk (via cmake branch), h5repack ↵Allen Byrne2013-09-2620-3812/+4811
| | | | | | | | UD plugins. Also warning session fixes. Tested: CMake local linux
* [svn-r24108] Remove file from the future.Allen Byrne2013-09-061-158/+0
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* [svn-r24106] Add help text tests for h5dump and h5repack to the linux ↵Allen Byrne2013-09-069-107/+1057
| | | | | | scripts. HDFFV-8498 merge from trunk. Tested: local linux - cmake and autotools
* [svn-r24072] Merge trunk cmake changes to 1.8 branch. Allen Byrne2013-08-268-941/+1170
| | | | | | | Also add default switch blocks to h5import. Merge h5dump any_path option from trunk. Tested: local linux
* [svn-r24012] Description:Quincey Koziol2013-08-151-1/+1
| | | | | | | | | | Bring r24011 from trunk to 1.8 branch: Clean up a few warnings Tested on: Mac OSX 10.8.4 (amazon) w/C++ & FORTRAN (too minor to require h5committest)
* [svn-r23965] Corrected "continuous" layout to "contiguous" in h5repack -h ↵Larry Knox2013-08-022-2/+2
| | | | | | | | output and comment. Jira issue HDFFV-8493. No test - text only change.
* [svn-r23771] HDFFV-8434,-8437,-8445,-8447,-8461: Merge changes from Trunk.Allen Byrne2013-06-141-0/+3
| | | | Tested: local linux
* [svn-r23464] Purpose: Jonathan Kim2013-03-273-10/+24
| | | | | | | | | | | | | HDFFV-8214 - h5repack failed converting small chunked dataset (size < 1K) to contiguous layout. Description: h5repack failed converting small chunked dataset (size < 1K) to contiguous layout. The first case was when chunk dim is bigger than the dataset dim (at leat one), h5repack failed with displaying error stacks. The other case is when chunk dim is smaller than the dataset dim, h5repack failed to change layout. Merged from HDF5 trunk 23407 Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), emu (solaris-BE), fred (mac64-LE), Windows (32-LE cmake), cmake (jam)
* [svn-r23460] Add missing infile assignment and error countsAllen Byrne2013-03-261-0/+2
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* [svn-r23459] HDFFV-8355 h5repack.sh was wrong for the two test cases.Peter Cao2013-03-261-3/+17
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* [svn-r23324] Snapshot version 1.8 release 11 (snap11)HDF Tester2013-03-041-1/+1
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* [svn-r23318] HDFFV-8311: Improve tools testing and eliminate dependency problemsAllen Byrne2013-02-251-153/+204
| | | | Tested: local linux
* [svn-r23301] Allen Byrne2013-02-181-170/+227
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* [svn-r23211] Merge trunk CMake changes for minimum cmake version of 2.8.10. ↵Allen Byrne2013-01-311-1/+1
| | | | | | This was prompted by HDFFV-8227, OS X requires latest version of cmake for proper support. Tested: local linux
* [svn-r22814] Purpose:Jonathan Kim2012-09-266-22/+143
| | | | | | | | | | | | | | HDFFV-8012 - h5repack changes max dims and cause failure if only "-f none" is used without changing layout for chunked dataset when a chunk dim is bigger than a dataset dim Description: "h5repack -f <obj>:NONE <file.h5> out.h5" command failed if source file contains chunked dataset and a chunk dim is bigger than a dataset dim. Another issue is that the command changed max dims if chunk dim is smaller than the dataset dim. These issue occurred when dataset size is smaller than 64k (compact size limit) Fixed them. Merged from HDF5 trunk r22805 Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), cmake (jam)
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