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* Squashed commit of the token_refactoring branch:Dana Robinson2020-01-161-8/+16
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* Update tools hid_t declarations with H5I_INVALID_HIDAllen Byrne2020-01-131-10/+10
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* Clean up tools warnings introduced by H5TOOLS_ERR_INIT macroJordan Henderson2019-12-311-55/+43
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* Refactor tools library error handling macrosJordan Henderson2019-12-281-159/+175
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* Fix compile statement orderAllen Byrne2019-12-201-2/+2
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* HDFFV-10976,-10980 Init obj_type before calling H5Rget_obj_type3Allen Byrne2019-12-201-2/+2
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* HDFFV-10980 - h5diff uses new ref APIsAllen Byrne2019-12-191-73/+327
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* Revert declaration used in macro.Allen Byrne2019-12-071-0/+1
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* Address compile warningsAllen Byrne2019-12-061-1/+0
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-12-021-4/+0
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '0772b975d1d2bfa15aedeb4b6e2c2aac78c61a2f': Fix missing free in H5T__ref_mem_read() Fix bugs in H5VL file comparison code. Add short circuit success to H5VL_cmp_connector_cls(). Implement file comparison VOL callback. Other changes to allow references to work with non-native connectors. There is a bug somewhere. Add support for point selections to H5S_select_project_intersection. Remove H5VL_NATIVE_FILE_GET_FILE_ID and add H5VL_OBJECT_GET_FILE Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings level and fixing some code.' (commit 5c911d8baf3)" Revert "Oops, remove more C99 designated initializers for VS 2010 compatibility." H5R: fix H5Tconv to check for null references Trivial parameter renaming in VOL API calls. Move checking for zero offset in selection adjust calls to the selection callbacks. This makes the procedure for checking it consistent across selection types and between _s and _u, ensures it is always is performed even when called within the H5S package, and removes the redundant check that would occur when callins H5S_select_adjust_s() from outside the H5S package. Replace H5Sselect_adjust_u() and H5Shyper_adjust_s() with H5Sselect_adjust. Implement "adjust_s" callback for all selection types. Add range checking to H5Sselect_adjust().
| * Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings ↵David Young2019-11-271-4/+0
| | | | | | | | level and fixing some code.' (commit 5c911d8baf3)"
* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-11-261-0/+4
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a8892bb42d6f6e4fbc30fae0eb2b957f81c938b9': (45 commits) Oops, remove more C99 designated initializers for VS 2010 compatibility. Add an #include to get a function declaration. Don't use C99 designated initializers, they're not compatible with Visual Studio 2010. Quiet some more maybe-uninitialized warnings---each is a false positive, *sigh*. This is more code that may not compile with VS2010, *sigh sigh*. Always warn on maybe-uninitialized. -Wincompatible-pointer-types was not available until GCC 5, so enable it only if that's the GCC version we're using. Only promote maybe-uninitialized warnings to errors on GCC 8. Even on GCC 8, there may be false positives at low optimization levels? I need to check. Only use -Werror=cast-function-type with GCC 8 and later. Put all of the -W options back into the order I found them in so that it's easier to compare old and new config/gnu-flags. Add new source files to CMakeLists.txt. Mention the -Werror= flags in libhdf5.settings.in. free -> HDfree Promote decleration-after-statement warnings to errors. Quiet decleration-after-statement warnings. Move a statement under some declarations since some vintages of Visual Studio don't like declarations after statements. Document H5D__chunk_mem_xfree_wrapper(). Undo accidental test deletion. Oops, delete a debug printf that snuck in here. Undo my changes to the HD macros, hadn't really intended those to be on this branch.... Make errors of some more warnings. Move disabled warnings to DEVELOPER_WARNING_CFLAGS. Put just one warning option on a line, and sort some of the options. Cast to the parameter type, H5VL_token_t *, instead of to unsigned char *. ...
| * Demote errors to warnings for a couple of unused-but-set variables thatDavid Young2019-11-131-0/+4
| | | | | | | | I cannot untangle right now.
* | HDFFV-10876 Update h5dump and h5ls for new ref api.Allen Byrne2019-11-071-17/+23
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* Updates to warnhist script, along with a few cleanups, and add some commentsQuincey Koziol2019-07-101-1/+1
| | | | to warning cleanups that are a bit obscure.
* Add support for GCC9, update warnhist script, and clean up warnings.Quincey Koziol2019-07-031-1/+1
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* Updated configure & CMake compiler flags for GCC 8.x, along with correspondingQuincey Koziol2019-06-281-4/+4
| | | | | changes to warnhist script (and some extra improvements for condensing C++ and Java warnings), and fixed a bunch of warnings.
* Add support for GCC 7.x warnings, update warnhist script to account for them,Quincey Koziol2019-06-211-6/+5
| | | | clean up warnings.
* Changes made based on feedback from pull request #1039.Vailin Choi2018-05-141-2/+2
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* Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-241-2/+2
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* Avoid double freeAllen Byrne2017-10-191-3/+0
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* Fix error handling issuesAllen Byrne2017-10-171-45/+66
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* HDFFV-10297 add h5copy test and fix h5diff errorsAllen Byrne2017-10-161-508/+497
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* HDFFV-10296 Update tools lib to use the error handling macros.Allen Byrne2017-10-131-390/+374
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* VS2012 and earlier cannot have execute stmnts before declareAllen Byrne2017-10-031-1/+1
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* Fix merge typosAllen Byrne2017-09-111-3/+3
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* HDFFV-9774 Fix code mergeAllen Byrne2017-09-081-3582/+2230
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* HDFFV-10246 Add check for string not null before useAllen Byrne2017-07-251-4/+16
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* Fixed many minor warnings.Dana Robinson2017-05-251-6/+6
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* HDFFV-10128 Fixed string length with no null fixedAllen Byrne2017-05-161-2/+7
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* HDFFV-10128 add test to check null termAllen Byrne2017-05-151-35/+52
| | | Test is another dataset
* HDFFV-10128 Fix null term stringsAllen Byrne2017-05-121-7/+17
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* HDFFV-10128 fix string compare and add testsAllen Byrne2017-03-031-9/+16
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* [svn-r30236] HDFFV-9928: remove duplicate and unconditional includes in ↵Allen Byrne2016-08-011-4/+0
| | | | | | h5diff_array. Also format function block in h5diff_attr to eliminate excessive whitespace
* [svn-r30113] Description:Quincey Koziol2016-06-281-1776/+1429
| | | | | | | | Clean up warnings (from 2774 -> 1560, with my standard debug build) Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r27626] Various minor warning fixes before major SWMR and VDS merges.Dana Robinson2015-08-311-20/+20
| | | | | | | | | | | gcc 4.9.2 was used to create the warning list - implicit casts - shadowed variables - various enum issues - other minor fixes (comments, unused macros, etc.) Tested on: h5committest
* [svn-r27572] Removed VMS-specific code from the library.Dana Robinson2015-08-241-22/+0
| | | | | | | | | The only remaining code consists of a few floating-point tests that rely on pre-generated and checked-in VMS files. These have been left alone, even though they will not be possible to recreate, since testing VMS float behavior is still important. Tested on: h5committest
* [svn-r24224] HDFFV-8529: Space separate define stringsAllen Byrne2013-09-301-6/+6
| | | | Tested: h5committest
* [svn-r24138] Cast constants to specified type. Allen Byrne2013-09-131-5/+5
| | | | | | | | Cast smaller vars to larger type. Cast calculation result to correct type. Changed int member to hbool_t Tested: local linux
* [svn-r24101] Description:Quincey Koziol2013-09-051-9/+8
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Clean up warnings, enable new compiler warning flag(s) and bring back changes from Coverity branch: r20813: Remove the dead code as listed for coverity bug #1722. h5committested. r20814: Issue 69: Check return value and throw error if negative return. Also free datatype id on error r20815: Use HDstrncpy. --gh r20816: Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832. r20817: Use HDstrncpy and HDstrncat. --gh r20818: Purpose: Fix valgrind issues with h5jam Description: Modified h5jam to free strings strdup'd in parse_command_line before exit. Note that they may still not be freed in case of error, due to the widespread use of exit(). r20819: Issue 80: change loop to use int as loop index. r20820: Maintenance: Fixed the bug found by coverity CID 788 There were two problems with this function: 1) it tried to unnecessary free NULL pointer 2) it tried to allocate c_name buffer that is done by H5Pget_class_name Tested on: Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN (too minor to require h5committest)
* [svn-r23695] Description:Quincey Koziol2013-05-111-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Clean up warnings in H5Tconv.c (down to _only_ 9000 lines of output now!) Merge changes from Coverity branch back to trunk: r20684: Fix for coverity bug #1721 which was due to the fix for coverity bug #943. r20685: Use HDstrncpy. --gh r20761: Purpose: Fix valgrind issues Description: Free image_data and data as appropriate in test_image. r20762: Purpose: Fix coverity issue 600 Description: Add check for return value of H5O_close in H5Ocopy. Also cleaned up various warnings. r20763: Purpose: Fix valgrind issues with h5stat Description: Modified h5stat to free "iter" before exit, and free "hand" before exit if parse_command_line exits directly. r20764: fixed coverity issues: 69, 327, 614, 684, 685, 696, 697, 1681, 967, 826, 660, 80 r20765: Fixed coverity bug 668 Pulled x * y * z multiply out of malloc operand into a separate n_elements variable to quiet integer overflow warning. No actual integer overflow tests are performed since it's just a test program but I did add a check that n_elements is >= 1. I also changed an error condition from doing its own close and returning -1 to "goto out;" like the rest of the program. r20766: Fixed coverity bug 667 Pulled x * y * z multiply out of malloc operand into a separate n_elements variable to quiet integer overflow warning. No actual integer overflow tests are performed since it's just a test program. Tested on: Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN (h5committest upcoming)
* [svn-r23415] Description:Quincey Koziol2013-03-211-2/+2
| | | | | | | Avoid using fpclassify() for detecting zero/non-zero values. Tested on: Mac OSX/64 10.8.3 (amazon) w/debug
* [svn-r23395] Description:Quincey Koziol2013-03-201-259/+430
| | | | | | | | | | | | Bring Coverity changes from branch to trunk: r20682: fixed coverity: 76, 77, 635, 636, 1164, 1165, 1166, 1121, 1122, 1117, 1343 Tested on: Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN (too minor to require h5committest)
* [svn-r22625] HDFFV-8111: h5diff compare file to itself - removed path shortcutAllen Byrne2012-08-031-0/+45
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* [svn-r21980] Correct HD prefix in tools for *allocAllen Byrne2012-02-241-1/+1
| | | | Checked for HD support.
* [svn-r21979] Correct HD prefix in tools for strlen and memcpyAllen Byrne2012-02-241-136/+136
| | | | Checked for HD support.
* [svn-r21974] Update HSIZE_T print statements to use correct macro.Allen Byrne2012-02-231-32/+32
| | | | | | Fix some more HD prefix issues in tools. Tested: local linux
* [svn-r21358] Purpose:Jonathan Kim2011-09-021-30/+40
| | | | | | | | | | | HDFFV-7712 - h5diff: segfault over combinations of complex container types (compound, array, vlen) Description: - Fixed segfault over dataset with container types (array,lven) with multiple nested compound types. (ex: compound->array->compound, compound->vlen->compound) Tested: jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
* [svn-r21121] Description:Quincey Koziol2011-07-181-4/+4
| | | | | | | | | Switch from H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for calls to H5Rdereference2(). Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too minor to require h5committest)
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