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* Correct statement orderAllen Byrne2017-05-181-1/+1
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* Tools merge from develop-1.10Allen Byrne2017-05-1722-2745/+2587
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* Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIESlrknox2017-05-101-2/+5
| | | | | | and other changes to Makefiles and config/conclude.am to eliminate link errors with new libdynlib*_la_LDFLAGS which were added to stop libdynlib* files linking to external libraries.
* Merge/port changes from develop back to 1.8 for tools and cmakeAllen Byrne2017-03-293-9/+12
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* HDFFV-10128 merge from developAllen Byrne2017-03-061-3/+7
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* HDFFV-9875 Bring changes from develop branchAllen Byrne2017-02-062-7/+4
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* Update CMake required to version 3.2.2Allen Byrne2017-01-181-1/+1
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* HDFFV-9994 port changes from develop.Allen Byrne2017-01-184-36/+36
| | | CMake folder changes brought up to standard.
* Update shared object file numbers according to changes in v1.8.18 release.lrknox2016-11-011-10/+23
| | | | | Update autotools and libtool versions. Run bin/reconfigure.
* Add namespace and export utilsAllen Byrne2016-10-141-0/+1
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* Remove unsupported functionAllen Byrne2016-09-282-72/+4
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* Merge/align from trunk(develop)Allen Byrne2016-09-2812-469/+580
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* [svn-r29841] Fix valgrind memory leak in h5diff tool.Allen Byrne2016-04-291-229/+240
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* [svn-r29309] HDFFV-9698, HDFFV-9241, HDFFV-9570: Merge fixes from trunk for ↵Allen Byrne2016-03-074-330/+324
| | | | subsetting index, default fill value display, and optional arg crash. Also some minor compiler warnings fixes.
* [svn-r28274] Applied patch to eliminate warnings from PRINTSTREAM macros ↵Larry Knox2015-11-042-5/+6
| | | | | | | | from HDF5 1.8.16. Update supported platform and tested configuration info in RELEASE.txt. Tested with h5committest.new.
* [svn-r28125] Add library version changes based on lt_vers.am file.Allen Byrne2015-10-191-14/+4
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* [svn-r27685] Merge of r27572 from trunkDana Robinson2015-09-063-30/+0
| | | | | | | | | | Remove all VMS-specific code from the library. The exception is the VMS floating-point tests since those are special as VMS floats are odd. Those files will be considered separately. Fixes HDFFV-9495 Tested on: h5committest
* [svn-r27532] Merge of CMake dual-binary changes from CMake branch to 1.8Allen Byrne2015-08-191-8/+31
| | | | Tested: local linux (CMake branch has been tested on Windows)
* [svn-r27253] Move packed bits files to subfolderAllen Byrne2015-06-191-14/+15
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* [svn-r27190] merge 27185 from trunk:Mohamad Chaarawi2015-06-111-7/+7
| | | | | | - fix more instances where both mpi is_initialized and is_finalized need to be checked before making any MPI calls. tested with h5committest.
* [svn-r27165] Merge 27133 & 27158 from trunk:Mohamad Chaarawi2015-06-082-6/+6
| | | | | | | | | - Add a new attribute function characterstic for format: * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r27112] merge 27111 from trunk:Mohamad Chaarawi2015-05-261-3/+3
| | | | move undef of __attribute__ back to private and remove its usage from public routines.
* [svn-r26728] Merge trunk reviwions 26669 and 26670.Larry Knox2015-04-041-1/+0
| | | | | | Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure. Tested h5committest
* [svn-r26717] Merge revisions 26387, 26649, 26650, 26678, and 26691 from ↵Mohamad Chaarawi2015-04-032-7/+15
| | | | trunk to squish warnings.
* [svn-r26697] HDFFV-9131: Remove obsolete/unneeded sections.Allen Byrne2015-04-011-2/+0
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* [svn-r26654] Bring trunk CMake changes to branch.Allen Byrne2015-03-301-1/+1
| | | | Tested: local linux
* [svn-r26648] Description:Quincey Koziol2015-03-302-23/+2
| | | | | | | | | | | | | Bring r26635 from trunk to 1.8 branch: Bring r26651 from autotools_rework branch to trunk: Remove the VSNPRINTF_WORKS macro, it's working around bugs in old SGI & HP compilers. Tested on: Linux/32 2.6.18 (jam) w/serial & parallel (Daily tested on trunk for 2+ days)
* [svn-r26600] Fix CMake target calls to add new parameterAllen Byrne2015-03-261-1/+1
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* [svn-r26582] Merge r26509 from trunkJerome Soumagne2015-03-251-2/+0
| | | | Run reconfigure after merges from autotools_rework branch
* [svn-r26398] Merges r26333 from trunkDana Robinson2015-03-091-1/+1
| | | | | | | | | | | | | | | | Eliminates gcc warnings due to -Wunsuffixed-float-constants. - Adds 'F' suffixes for most float constants. - A few constants MUST be of type double. These now receive the long double L suffix and are then cast to double. I do this via a new H5_DOUBLE() macro which was added to H5private.h. - Additionally, some 1.8-specific float suffixes were added. Fixes: HDFFV-9148 Tested on: h5committest
* [svn-r26395] Merges r26329 from trunkDana Robinson2015-03-092-37/+0
| | | | | | | | | | | | | | Removed the configure option that allows selective disabling of individual internal filters (fletcher32, shuffle, etc.). This feature mucked up the code with a lot of #ifdefs, saved very little space and was not scalable to a general scheme for library size reduction. We've decided to remove the feature while we investigate a more general scheme for decreasing the library size. Fixes: HDFFV-9086 Tested on: h5committest
* [svn-r26371] Update cmake mininum versionAllen Byrne2015-03-051-1/+1
| | | | Update windows wix cpack process.
* [svn-r26314] Brought autotools related changes from the trunk to the branch, ↵Scot Breitenfeld2015-02-261-1/+2
| | | | r26188 r26280
* [svn-r26304] bring 26303 from trunk:Mohamad Chaarawi2015-02-251-2/+2
| | | | remove files with .clog2 extension generated by MPE when doing make clean
* [svn-r26224] merge 26180 from trunk:vms_last_support_1_8Mohamad Chaarawi2015-02-181-1/+0
| | | | | | | | | | configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch: - Remove Infering parallel compilers (C and Fortran) from configure.ac - Remove restriction to build shared with parallel - Cleanup parallel sections in configure.ac - remove large file support checks - MPE fixes.
* [svn-r26064] HDFFV-9018: Install PDB files to bin folder with dlls.Allen Byrne2015-01-281-1/+1
| | | | Tested: windows
* [svn-r25957] Added Perform and io_timer back into build.Allen Byrne2015-01-051-1/+1
| | | | Tested: local linux cmake
* [svn-r25956] [Merge r25954 from trunk]Albert Cheng2015-01-052-7/+13
| | | | | | | | | | | | | | | HDFFV-9046: reorganize hdf5/perform, step 2 Last changes had caused problems with Windows platform: 1. H5private.h in io_timer.h is not accessible in the distributed shared library of tools. Need to move it to io_timer.c. 2. debug_start_stop_time() would not be available outside of h5perf. Some favor of compiler does not like it. Screened it out for now. 3. mere "extern" is not good enough for Windows shared library. Must mark them as DLL. Need to mark them as "H5TOOLS_DLL". 4. STANDALONE mode is broken. Screened out the code for now. Tested: h5committest.
* [svn-r25952] HDFFV-9054: disable io_timer in tools lib and perform ↵Allen Byrne2015-01-051-1/+1
| | | | sub-folder due to SHARED compile issues and other issues.
* [svn-r25948] [Merged r25946 from trunk]Albert Cheng2015-01-041-10/+0
| | | | | | Removed debug statments that use //. Tested: env CFLAGS=-ansi buildhdf5 in jam and parallel platypus.
* [svn-r25947] [merged changes from trunk r25940]Albert Cheng2015-01-045-3/+324
| | | | | | | | | | | | | | | | | | | | | | | HDFFV-9046: reorganize hdf5/perform, step 2 Move timing measurement routines used by h5perf and h5perf_serial to tools/lib so that they can be used by other tools too. tools/lib/io_timer.c tools/lib/io_timer.h tools/perform/io_timer.c tools/perform/io_timer.h renamed perform/io_timer.[ch] to lib/io_timer.[ch] tools/lib/Makefile.am tools/lib/Makefile.in tools/lib/CMakeLists.txt tools/perform/Makefile.in tools/perform/Makefile.am tools/perform/CMakeLists.txt MANIFEST updated due to the move. Tested; h5committest and jam (serial)
* [svn-r25497] Description:Quincey Koziol2014-07-304-39/+40
| | | | | | | | | | Merge changes that correspond to the 64-bit ID changes (without the actual switch to 64-bit IDs) to the 1.8 release branch. (Plus a few minor cleanups and alignments with the trunk that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r25402] Bring 25397/8 from trunk:Mohamad Chaarawi2014-07-101-1/+0
| | | | | | | - remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today. - fix bug in t_mpi.c (HDFFV-8856) tested with h5committest.
* [svn-r25225] Description:Quincey Koziol2014-05-291-130/+163
| | | | | | | | | | | | | | | | Bring r25215 from trunk to 1.8 branch: Bring changes from Coverity branch back to trunk: r20914: Use HDstrncpy and HDstrncat! --gh r20915: Use HDstrncpy and HDstrncat! --gh Tested on: MacOSX/64 10.9.3 (amazon) w/gcc 4.9, FORTRAN, C++, multi-threads & parallel (h5committested on the trunk)
* [svn-r25222] Merge cmake_ext_mod into 1.8Allen Byrne2014-05-271-16/+1
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* [svn-r25198] Description:Quincey Koziol2014-05-181-3/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r25197 from trunk to 1.8 branch: Bring changes from hdf5_1_8_coverity branch back to trunk: r20878: Issue 76: Check if H5Tget_nmembers(type) fails and simply return(FALSE). Also move printf to after check. r20880: Issue 192: Create ret_val var set to -1. Add out label for failures to jump to, return ret_val at bottom. r20882: Fixes for coverity: 1) bug #1679: remove dead code in test/mf.c 2) bug #1680: remove dead code in tools/lib/h5diff_dset.c r20883: Fix coverity issue 585 Description: Changed variable "c" in processStrData in h5import.c to an int, to match fgetc return value, and removed call to feof, instead checking if c == EOF. Tested on: MacOSX/64 10.9.3 (amazon) w/C++, FORTRAN & parallel (too minor to require h5committest)
* [svn-r25106] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-251-1/+0
| | | | | | | | back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
* [svn-r25082] Bug HDFFV-8625, HDFFV-8639, HDFFV-8745:Albert Cheng2014-04-221-7/+24
| | | | | | | | | | | | | | | | | | | h5diff issues "unable to read attribute" error message when comparing two files Description: h5diff did not handle attributes of variable length strings correctly. It created the wrong memory type if one but not both compared attributes are of the variable strings type. It ended in H5Aread() failure. Solution: We decided to treat the case when one type is variable length string and the other is not as incomparable. That bypassed the above error. We still need to figure out the proper way, if possible, to compare variable string with non-variable string types. Tested: h5committested plus tested in Swallow (OS X 10.8).
* [svn-r25014] Purpose:Dana Robinson2014-04-112-4/+4
| | | | | | | | | | | | | | | | | Merge of r24937 from the trunk Adds H5free_memory to the API. This function should be used to free memory allocated by the library (e.g., returned values from H5Tget_tag, H5Pget_class_name, etc.). This is mainly to help Windows applications deal with multiple CRT instances, but can also be helpful when a debug memory manager is being used or when the HDF5 API is being wrapped for managed languages like Python and Java. Tested on: 32-bit LE linux (jam) with fortran and C++ 64-bit BE linux (ostrich) 64-bit LE linux (koala)
* [svn-r25000] Bugfix: HDFFV-8639 Albert Cheng2014-04-091-3/+7
| | | | | | | | | | | h5diff segfaults with user's files Solution: Added a variable to indicate if real data are in the buffer and will call H5Dvlen_reclaim() only when real data are in the buffer. Tested: with the user provided data files and no more segmentaion fault. Also h5committ tested.
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