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* Update data output referenceAllen Byrne2019-12-031-7/+24
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* Update reference files and fix int as stringAllen Byrne2019-12-031-1/+7
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-12-023-8/+1
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '0772b975d1d2bfa15aedeb4b6e2c2aac78c61a2f': Fix missing free in H5T__ref_mem_read() Fix bugs in H5VL file comparison code. Add short circuit success to H5VL_cmp_connector_cls(). Implement file comparison VOL callback. Other changes to allow references to work with non-native connectors. There is a bug somewhere. Add support for point selections to H5S_select_project_intersection. Remove H5VL_NATIVE_FILE_GET_FILE_ID and add H5VL_OBJECT_GET_FILE Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings level and fixing some code.' (commit 5c911d8baf3)" Revert "Oops, remove more C99 designated initializers for VS 2010 compatibility." H5R: fix H5Tconv to check for null references Trivial parameter renaming in VOL API calls. Move checking for zero offset in selection adjust calls to the selection callbacks. This makes the procedure for checking it consistent across selection types and between _s and _u, ensures it is always is performed even when called within the H5S package, and removes the redundant check that would occur when callins H5S_select_adjust_s() from outside the H5S package. Replace H5Sselect_adjust_u() and H5Shyper_adjust_s() with H5Sselect_adjust. Implement "adjust_s" callback for all selection types. Add range checking to H5Sselect_adjust().
| * Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings ↵David Young2019-11-273-8/+1
| | | | | | | | level and fixing some code.' (commit 5c911d8baf3)"
* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-11-263-1/+8
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a8892bb42d6f6e4fbc30fae0eb2b957f81c938b9': (45 commits) Oops, remove more C99 designated initializers for VS 2010 compatibility. Add an #include to get a function declaration. Don't use C99 designated initializers, they're not compatible with Visual Studio 2010. Quiet some more maybe-uninitialized warnings---each is a false positive, *sigh*. This is more code that may not compile with VS2010, *sigh sigh*. Always warn on maybe-uninitialized. -Wincompatible-pointer-types was not available until GCC 5, so enable it only if that's the GCC version we're using. Only promote maybe-uninitialized warnings to errors on GCC 8. Even on GCC 8, there may be false positives at low optimization levels? I need to check. Only use -Werror=cast-function-type with GCC 8 and later. Put all of the -W options back into the order I found them in so that it's easier to compare old and new config/gnu-flags. Add new source files to CMakeLists.txt. Mention the -Werror= flags in libhdf5.settings.in. free -> HDfree Promote decleration-after-statement warnings to errors. Quiet decleration-after-statement warnings. Move a statement under some declarations since some vintages of Visual Studio don't like declarations after statements. Document H5D__chunk_mem_xfree_wrapper(). Undo accidental test deletion. Oops, delete a debug printf that snuck in here. Undo my changes to the HD macros, hadn't really intended those to be on this branch.... Make errors of some more warnings. Move disabled warnings to DEVELOPER_WARNING_CFLAGS. Put just one warning option on a line, and sort some of the options. Cast to the parameter type, H5VL_token_t *, instead of to unsigned char *. ...
| * Demote errors to warnings for a couple of unused-but-set variables thatDavid Young2019-11-132-0/+7
| | | | | | | | I cannot untangle right now.
| * Mark an unused parameter H5_ATTR_UNUSED.David Young2019-11-131-1/+1
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* | Comment correctionAllen Byrne2019-11-211-1/+1
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* | HDFFV-10876 Update h5dump and h5ls for new ref api.Allen Byrne2019-11-0717-1136/+1701
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* Fix reference type comparison in h5dumpJerome Soumagne2019-10-081-1/+5
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* Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim()Jerome Soumagne2019-10-083-15/+15
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* More whitespace changesAllen Byrne2019-10-031-46/+5
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* HDFFV-10919 merge synchingAllen Byrne2019-10-022-62/+62
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* Renamed get/set_time() calls in the tools library to avoid nameDana Robinson2019-09-192-7/+10
| | | | clash when building static parallel HDF5 w/ static linking to OpenMPI.
* HDFFV-10876 h5dump OPAQUE size should be optionalAllen Byrne2019-08-271-9/+17
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* Untangle #ifdef mess in ROS3 code.Dana Robinson2019-08-202-12/+9
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* Add HD prefix to testsAllen Byrne2019-08-153-26/+26
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* Updated h5trav.c to emit output that doesn't require ddl changes for mapDana Robinson2019-08-131-3/+0
| | | | support.
* Added the map (H5M) APIDana Robinson2019-08-133-0/+6
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* Squashed commit of the following:Larry Knox2019-07-252-14/+513
| | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* Merge branch 'develop' into feature/update_gcc_flagsQuincey Koziol2019-07-101-1/+1
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| * HDFFV-10581 fix locations for static pdb filesAllen Byrne2019-07-081-1/+1
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* | Updates to warnhist script, along with a few cleanups, and add some commentsQuincey Koziol2019-07-102-2/+2
| | | | | | | | to warning cleanups that are a bit obscure.
* | Add support for GCC9, update warnhist script, and clean up warnings.Quincey Koziol2019-07-033-5/+5
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* Updated configure & CMake compiler flags for GCC 8.x, along with correspondingQuincey Koziol2019-06-283-10/+10
| | | | | changes to warnhist script (and some extra improvements for condensing C++ and Java warnings), and fixed a bunch of warnings.
* Add support for GCC 7.x warnings, update warnhist script to account for them,Quincey Koziol2019-06-212-7/+5
| | | | clean up warnings.
* HDFFV-10805 Add option to only build shared targetsAllen Byrne2019-06-181-17/+21
| | | | | HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static HDFFV-10803 Update FindSZIP.cmake find module Remove unneeded modules and update java modules
* Fixed typoBinh-Minh Ribler2019-01-081-1/+1
| | | | | Platforms tested: Darwin (osx1010test)
* Refixed HDFFV-10578Binh-Minh Ribler2019-01-081-1/+16
| | | | | | | | | | | | Description: Applied Neil's fix for this issue after removing previous attempt. The resources are now released in init_objs() when failure occurs there. Neil will fix HDFFV-10676 separately. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-10-291-12/+0
|\ | | | | | | | | * commit '7db3ea76da5d3b5c237a707b09d1618d3206ba83': Makes the installed header files the same between the autotools and CMake.
| * Makes the installed header files the same between the autotoolsDana Robinson2018-10-271-12/+0
| | | | | | | | | | | | | | | | | | | | | | | | and CMake. * CMake will no longer install private generated headers and tools library headers. * Several empty public header files (which represent internal packages) were removed. These were only installed by CMake. * Autotools installs will install H5FDwindows.h. Fixes HDFFV-10614.
* | TRILAB-81 check for func success before using valueAllen Byrne2018-10-191-27/+31
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* | TRILAB-81 coverity fixesAllen Byrne2018-10-173-62/+66
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* HD prefix and whitespaceAllen Byrne2018-08-281-1/+1
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* Add quotes to places where MPI_C_LIBRARIES are linked againstJordan Henderson2018-07-271-2/+2
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* Changes made based on feedback from pull request #1039.Vailin Choi2018-05-148-24/+24
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-141-31/+25
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits) GGC requires attribute before function Correct COMPILE defs usage Add missing module_dir property Text cleanup Correct sentence punctuation. Add release note. Use set_property for MT flag Correct command usage Remove APPEND Fix typo Add missing test lib add missing folder to path Fix another command revert Missed a command revert Revert to old style for LINK_FLAGS gen expr not working LINK_FLAGS must be separate property sets Fix link flags syntax Revert refactor link flags refactor link flags to interface Refactor link flags ...
| * TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-261-31/+25
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* | Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-2410-32/+34
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* TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-201-1/+1
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* TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-171-0/+4
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* HDFFV-10444 fix soversion numbers for librariesAllen Byrne2018-04-101-2/+2
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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-1/+1
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* HDFFV-10384 Add optional arg to enable-error-stackAllen Byrne2018-02-142-6/+18
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* HDFFV-10396 Eliminate overuse of h5tools_simple_prefix functionAllen Byrne2018-01-251-65/+0
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* HDFFV-8745 fix minor defectsAllen Byrne2018-01-092-5/+3
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* HDFFV-8745 cleanup vl resource usageAllen Byrne2018-01-021-13/+18
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* HDFFV-8745 - fix implementation of 8625Allen Byrne2018-01-022-20/+19
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* Add library INTERFACE and MPI to toolsAllen Byrne2017-12-281-2/+8
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