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* VFD SWMR: Sync with develop (#811)Dana Robinson2021-06-301-54/+54
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Normalization with develop * Removes checks and work-arounds for strtoll and strtoull (#769) * Removes checks for (v)snprintf, which are C99 (#772) * Update missing release note info. (#776) * Replaces the H5_OVERRIDE macro with override (#773) The macro is no longer necessary now that we require C++11. * Cleans up some POSIX header bits in H5private.h (#783) * Removes outdated checks for ways inline might be defined (#781) These are obsolete now that we require C99. * Removes checks for system(), which is C89/90 (#782) * Removes C++ dependency on H5private.h (#774) * Removes C++ dependency on H5private.h Most C API calls have been removed, aside from a few uses of free, where we just dropped the 'HD'. A couple of H5_ATTR_UNUSED macros were also replaced with (void) statements. * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Further simplifies Autotools type size checks (#789) Also fixes an issue where clock_gettime and difftime are not detected due to earlier simplifications of this code. * Release Note (#784) * Normalization of CMake H5pubconf.h with Autotools (#791) Mostly just moving things around and changing the comments to keep the delta small. The only symbol change is that for curl/curl.h which I changed to H5_HAVE_CURL_CURL_H to match the Autotools. This symbol is not used in the library and is just an artifact of the checks. * Fix tools test (#794) * Removes ancient Autotools cruft (#790) * Reorganization of C and POSIX headers in H5public.h & H5private.h (#793) * Reorganization of C and POSIX headers in H5public.h & H5private.h Consolidated and removed duplicates * It turns out Windows has sys/types.h Co-authored-by: Larry Knox <lrknox@hdfgroup.org> * Removes checks for signal and set/longjmp, which are C89 (#798) Also removes checks for setjmp.h and stddef.h * Assume frexpl/f and fabsl/f, which are C99 (#799) * Assume the library has C99 types in C++ type code (#806) * Assume the library has C99 types in C++ type code * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes obsolete equivalents of C99's __func__ (#800) * Cleans up POSIX/C bits in H5private.h (#804) * Cleans up POSIX/C bits in H5private.h * Assume difftime exists (C89) * Reorg AC_CHECK_HEADERS so headers are in alphabetical order * Split off networking-related AC_CHECK_HEADERS * Remove unused UNAME_CYGWIN from configure.ac * Remove checks for unused sys/timeb.h * Tidying pass over H5private.h HD prefix macros * Tidy H5win32defs.h * Add HD prefix to various scanf calls * Committing clang-format changes * Fixes to the alarm(2) code used in the tests to make Windows happy Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Brings the tools getopt(3) replacement into the main library (#803) * Moves get_option from the tools library to the C library * Adds H5 prefix to get_option call and variables * Renames the H5_get_option long options struct and enum * Removes type guesses when C99 types are missing (#807) * Assume C99 types exist in H5detect.c (#808) * Fixes parallel issues from recent C99 changes * Adds MPE FUNC --> __func__ changes missed in earlier PRs * Fix typo * Fixes parallel issues from recent C99 changes (#809) * Fixes parallel issues from recent C99 changes * Adds MPE FUNC --> __func__ changes missed in earlier PRs * Even more missed FUNC --> __func__ macros * Removes remaining H5_TIME_WITH_SYS_TIME cruft (#810) Mostly from CMake Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Much normalization with develop (#701)Dana Robinson2021-05-284-43/+46
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Brings CMake updates from develop * Brings reduction in pedantic casts from develop * Purges UFAIL from the library (#637) * Committing clang-format changes * Purges UFAIL from the library * H5HL_insert change requested in PR Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes gratuitous (double)x.yF casts (#632) * Committing clang-format changes * Removes gratuitous (double)x.yF casts * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Committing clang-format changes * Cleans up a const warning left over from previous constification (#633) * Committing clang-format changes * Adds consts to a few global variables * Cleans up a const warning left over from previous constification Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Formatted source * Bring over some VOL registration changes * VOL cleanup * H5VL_request_status_t substitutions * H5F.c cleanup * Minor API tweaks from develop * Moves H5G package init/teardown to H5Gint.c * H5G cleanup * H5M cleanup * H5SM cleanup * H5T cleanup * H5R cleanup * H5Lpublic.h cleanup * H5L cleanup * H5O cleanup * H5A, H5CS, and H5AC cleanup * Moved H5A init/teardown code to H5Aint.c * Moves H5D I/O functions to H5D.c * H5D cleanup * Misc minor cleanup * H5P close cleanup * H5Tpublic.h cleanup * Fixes err_compat test * H5PLpublic.h cleanup * Updates H5Ppublic.h * H5Fpublic.h updates * H5A.c cleanup * Brings over H5Aexists and related changes * Brings CMake shell testing changes from develop * Close callback changes * H5R and H5Tcommit normalization * err_compat test works now * H5O tweaks * Updates VOL registration code * Brings over H5VL_create_object * H5Tconv.c reformatting * H5T.c tweaks * Brings datatype and reference updates from develop * Brings VOL plugin loading changes from develop * Brings event sets from develop * Brings async functions over * Tools changes * Brings over many tools changes from develop * Brings VOL flags from develop * Fixes h5dump double/float tests * Updates h5repack tests * Brings h5diff test changes from develop * Last h5dump changes * Brings test changes from develop * Committing clang-format changes * Tidied h5_testing() * Brings chunk iteration code + misc from develop * Updates vds test * Enables external link parallel test * Brings updated property lists from develop * H5G changes from develop * H5MF cleanup * Brings vfd_swmr test back into CMake * Updates threadsafe test * Updates plist test * Brings recent changes from develop Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Brings many CMake changes from developDana Robinson2021-04-081-4/+17
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* Updates license url and history docsDana Robinson2021-03-255-5/+5
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* Formats the source and updates the gcc warning pragmasDana Robinson2021-03-254-521/+571
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* Tools refactorAllen Byrne2020-07-152-112/+266
| | | | | | Move error_stack setup to tools library Add structure for h5dump properties Eliminate duplicated h5diff functions Use properties structure in place of argument lists.
* Fixes for warnings in the tools code.Dana Robinson2020-04-251-9/+9
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* Fixed h5diff command-line parameters to use 1 and 2 instead of srcDana Robinson2020-04-221-43/+43
| | | | and dst.
* Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp.Dana Robinson2020-04-211-1/+51
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* TRILAB-192 add c++ and fortran warnings build systems one fileAllen Byrne2020-04-051-0/+2
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* Add extensive warnings to tools executablesAllen Byrne2020-03-251-0/+2
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* TRILAB-142 Change minimum CMake version to 3.12Allen Byrne2020-02-211-1/+1
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* Small fixes for tools and skip autotools tests for no filterAllen Byrne2020-01-291-2/+2
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* fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, ↵kmu2020-01-271-1/+1
| | | | Wsign-compare, Wmisleading-indentation, Wshadow
* Update tools hid_t declarations with H5I_INVALID_HIDAllen Byrne2020-01-131-1/+2
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* Refactor tools library error handling macrosJordan Henderson2019-12-281-23/+22
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* HDFFV-10980 - h5diff uses new ref APIsAllen Byrne2019-12-191-0/+2
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* Add HD prefix to testsAllen Byrne2019-08-152-27/+27
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* HDFFV-10805 Add option to only build shared targetsAllen Byrne2019-06-181-33/+37
| | | | | HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static HDFFV-10803 Update FindSZIP.cmake find module Remove unneeded modules and update java modules
* HD prefix and whitespaceAllen Byrne2018-08-281-3/+3
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* Add quotes to places where MPI_C_LIBRARIES are linked againstJordan Henderson2018-07-271-1/+1
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* Fix MPI on Windows by adding MPI include folderAllen Byrne2018-05-091-2/+2
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* TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-261-9/+9
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* TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-201-1/+1
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* TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-171-5/+3
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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-1/+1
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* HDFFV-10384 Add optional arg to enable-error-stackAllen Byrne2018-02-142-2/+2
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* HDFFV-10385 rework java namesAllen Byrne2018-01-171-3/+0
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* HDFFV-10385 refactor CMAKE_BUILD_TYPE usageAllen Byrne2018-01-091-4/+3
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* Minor warning fixesDana Robinson2017-11-151-0/+3
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* HDFFV-10297 add h5copy test and fix h5diff errorsAllen Byrne2017-10-164-58/+58
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* HDFFV-9774 Add enable-error-stack argument to h5diffAllen Byrne2017-08-313-227/+234
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* Stripped C standard library headers (and a couple of macros)Dana Robinson2017-07-173-8/+0
| | | | | from the tools code. This is all handled in H5private.h, which should be included in all tools source files.
* HDFFV-9995 Clarify help textAllen Byrne2017-05-161-21/+24
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-255-30/+20
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* HDFFV-9875 Fix target exports and add static tools pdb filesAllen Byrne2017-02-021-17/+18
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* HDFFV-10123 fix shared nameAllen Byrne2017-02-011-1/+1
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* HDFFV-10123 Add SHARED toolsAllen Byrne2017-02-011-2/+18
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* Update cmake min version and cmake command conventionAllen Byrne2017-01-101-3/+3
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* Split tools into src and test - add foldersAllen Byrne2016-10-276-0/+1230
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