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* Squash my changes on branch `fprintf-experiment` into one commit forDavid Young2020-07-071-3/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | reapplication to my new warnings branch, `warnings-again`. These changes are included: commit 915551b7bf64e777dd2007386ec77b1d117770da Merge: 63858c2 a8892bb Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 17:39:49 2019 -0600 Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment commit a8892bb42d6f6e4fbc30fae0eb2b957f81c938b9 Merge: 5c911d8 f907b51 Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 17:33:54 2019 -0600 Merge pull request #2055 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop * commit 'f907b511d06612dafc7814a7c30f2f3d2b76d52b': Oops, remove more C99 designated initializers for VS 2010 compatibility. commit 63858c22e168acaec0af8ced6641f26102cc6bb0 Merge: 20ae787 5c911d8 Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 17:04:42 2019 -0600 Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment commit 5c911d8baf3ee7fe654269088eebdf07f59a8192 Merge: b8a5671 62208b0 Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 16:58:27 2019 -0600 Merge pull request #2030 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop * commit '62208b056a09c01855fbac7f75146be58ad6bfe5': (44 commits) Add an #include to get a function declaration. Don't use C99 designated initializers, they're not compatible with Visual Studio 2010. Quiet some more maybe-uninitialized warnings---each is a false positive, *sigh*. This is more code that may not compile with VS2010, *sigh sigh*. Always warn on maybe-uninitialized. -Wincompatible-pointer-types was not available until GCC 5, so enable it only if that's the GCC version we're using. Only promote maybe-uninitialized warnings to errors on GCC 8. Even on GCC 8, there may be false positives at low optimization levels? I need to check. Only use -Werror=cast-function-type with GCC 8 and later. Put all of the -W options back into the order I found them in so that it's easier to compare old and new config/gnu-flags. Add new source files to CMakeLists.txt. Mention the -Werror= flags in libhdf5.settings.in. free -> HDfree Promote decleration-after-statement warnings to errors. Quiet decleration-after-statement warnings. Move a statement under some declarations since some vintages of Visual Studio don't like declarations after statements. Document H5D__chunk_mem_xfree_wrapper(). Undo accidental test deletion. Oops, delete a debug printf that snuck in here. Undo my changes to the HD macros, hadn't really intended those to be on this branch.... Make errors of some more warnings. Move disabled warnings to DEVELOPER_WARNING_CFLAGS. Put just one warning option on a line, and sort some of the options. Cast to the parameter type, H5VL_token_t *, instead of to unsigned char *. Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to structs containing those arrays. Encapsulating the arrays in this way makes it easier to write and think about pointers to these types, casts to/from these types, etc. ... commit 20ae7877e33931b95e8c3502b027d6c3fe94a11f Merge: 46f8c61 edd5297 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:34:09 2019 -0600 Merge remote-tracking branch 'origin/add-werror-and-squash-some' into fprintf-experiment commit 46f8c613d5117a8be5bc8385a072daa0b4262f06 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:29:00 2019 -0600 GCC really wants us to use `ll` to format `long long`, so try to make that work before any other format modifier. Seems like we're not compiling the autoconf test program with -Werror=format ? Probably should. commit eee35b8ef3759c391327cd48a9b3c56b6f8abc99 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:28:05 2019 -0600 It's hard to know just how wide an HDoff_t will be, and I don't think POSIX or C standards provide a PRI macro for it, so cast to intmax_t and format using PRIdMAX. commit 86eab12df7a89b546a38e99f8178dd2adbcb3433 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:26:25 2019 -0600 URemove some casts.se the right format string for the argument. Here and there stop casting a printf argument. commit f722f7cbecbaa99449941484b014426f62f1bed5 Merge: 58e3743 6d5ec83 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 14:44:16 2019 -0600 Merge branch 'add-werror-and-squash-some' into fprintf-experiment commit 58e3743b7faa9836606ee91798fe80dfc0040da7 Author: David Young <dyoung@hdfgroup.org> Date: Wed Nov 20 21:07:21 2019 -0600 Remove custom HDfprintf implementation, using the standard library's, instead. Take a swipe at repairing fprintf format strings, mainly replacing "%Hu" with "%" PRIuHSIZE, "%a" with "%" PRIuHADDR, "%Zu" with "%zu". Here and there remove an awkward cast of a printf argument to `long long` and use PRI[doux]8, PRI[doux]32, or PRI[doux]64, instead. Change occurrences of "%t" to "%s" and perform a suitable change of argument, `cond` -> `cond ? "TRUE" : "FALSE"`. Some occurrences of %Hu, %a, and %t remain, they just weren't flagged by the compiler because of #ifdef'age. commit d4366909293fa970c23512ac80e5d865d76cddbf Author: David Young <dyoung@hdfgroup.org> Date: Wed Nov 20 20:54:32 2019 -0600 Promote format-string warnigns to errors.
* Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp.Dana Robinson2020-04-211-0/+32
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* Separated VFD and VOL parameters in tools.Dana Robinson2020-04-211-8/+6
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* Fixed problems with S3 and HDFS VFDs.Dana Robinson2020-04-171-2/+2
| | | | | | * Updated info struct parameter to correct info_string * Fixed Makefile.am where the S3 VFD was listed twice, causing duplicated symbols errors.
* Added support for passing connector info strings via the commandDana Robinson2020-04-091-3/+3
| | | | line to the tools internals.
* Fix for passthrough VOL not passing tools tests due to incorrectDana Robinson2020-04-081-6/+1
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* Merge branch 'develop' into tools_vol_updateDana Robinson2020-04-061-8/+8
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| * Fixed unnecessary H5R casts in the tools that were raising warnings.Dana Robinson2020-04-021-8/+8
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* | Added checks for native optional call support in some of the tools.Dana Robinson2020-04-021-26/+38
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* | Merge branch 'develop' into tools_vol_updateDana Robinson2020-04-021-7/+7
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| * Minor renaming in the tools code.Dana Robinson2020-03-311-7/+7
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* | Merge branch 'develop' into tools_vol_updateDana Robinson2020-03-311-0/+2
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| * Fix for HDFFV-11065.Gerd Heber2020-03-291-0/+2
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* | Misc changes for h5dump VOL changes.Dana Robinson2020-03-301-4/+4
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* A few small tweaks to the tools from reviewJordan Henderson2020-03-271-2/+2
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* Update Tools library to be better compatible with VOL connectorsJordan Henderson2020-03-171-178/+71
| | | | | | | | | | | | | | | | | | | | | Modify h5repack to integrate with VOL connectors Update tools library to accomodate VOL connectors Update logic in h5tools_fopen for VOL connectors Add command-line options to h5repack for specifying in/out VOL connectors Implement h5tools_set_vol_fapl Fix library shutdown issue Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme Avoid H5Ocopy in h5repack when using different VOL connectors Update h5tools_test_utils.c for ROS3 and HDFS integration
* fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, ↵kmu2020-01-271-4/+4
| | | | Wsign-compare, Wmisleading-indentation, Wshadow
* squash cast warning fixkmu2020-01-231-2/+2
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* Change tools debug macros to not use error stackAllen Byrne2020-01-231-10/+10
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* merge and fixkmu2020-01-211-10/+22
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| * Squashed commit of the token_refactoring branch:Dana Robinson2020-01-161-10/+22
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* | merge and fix conflictkmu2020-01-191-16/+16
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| * Update tools hid_t declarations with H5I_INVALID_HIDAllen Byrne2020-01-131-14/+14
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* Clean up tools warnings introduced by H5TOOLS_ERR_INIT macroJordan Henderson2019-12-311-40/+27
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* Refactor tools library error handling macrosJordan Henderson2019-12-281-62/+61
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* HDFFV-10976,-10980 Init obj_type before calling H5Rget_obj_type3Allen Byrne2019-12-201-1/+1
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* Address compile warningsAllen Byrne2019-12-061-18/+0
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* Update h5ls help and rework dump_mem routines for attrsAllen Byrne2019-12-041-60/+49
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* Update reference callsAllen Byrne2019-12-041-10/+21
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* HDFFV-10876 Update h5dump and h5ls for new ref api.Allen Byrne2019-11-071-102/+538
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* Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim()Jerome Soumagne2019-10-081-1/+1
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* Whitespace cleanupAllen Byrne2019-10-031-159/+157
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* HDFFV-10901 add missing config optionsAllen Byrne2019-09-131-615/+431
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* Fix compiler warnings with diabled ROS3 and HDFS VFDs.Jacob Smith2019-08-141-0/+4
| | | | | | Fix misuse of [HD]strncpy and [HD]snprintf. Minor formatting changes. Fix test cleanup issue with java groups example.
* Merge reconciliation and VFD test fixesAllen Byrne2019-08-041-1/+0
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* Squashed commit of the following:Larry Knox2019-07-251-28/+293
| | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* Changes made based on feedback from pull request #1039.Vailin Choi2018-05-141-3/+3
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* Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-241-3/+3
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* Minor warning fixesDana Robinson2017-11-151-0/+2
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* HDFFV-10282 refactor out assert calls in toolsAllen Byrne2017-08-231-17/+16
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* HDFFV-10188 error on NULL dataspaceAllen Byrne2017-08-041-30/+32
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* HDFFV-10186 Add endianess to bitfield and fix testsAllen Byrne2017-05-101-1/+1
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Bring SWMR-related tools changes from revise_chunks to develop.Quincey Koziol2016-12-111-0/+1
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* Split tools into src and test - add foldersAllen Byrne2016-10-271-0/+2939
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