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* Check sizeof type to use correct ref_typeAllen Byrne2020-03-092-38/+41
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* Fix h5ls attrregAllen Byrne2020-03-011-10/+38
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* Updated reference codeAllen Byrne2020-02-291-15/+90
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* Merge CMake and tools changes from developAllen Byrne2020-02-2729-903/+919
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* Merge from dev, sanitizer, fortran, warnings and tools idsAllen Byrne2020-02-115-15/+15
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* HDFFV-11014, fix the h5repack issue that misses a few attributes during the ↵Muqun Yang2020-02-101-1/+8
| | | | repacking. The flag that checks the object reference attribute is not updated properly. The fix is trivial. Just need to move the flag update line into the inner loop. Tested at Jelly. Also update the release.txt.
* tools perform and hid_t init settingsAllen Byrne2020-01-201-1/+2
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* merge intel warning fixKimmy Mu2020-01-091-3/+3
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* More whitespace changesAllen Byrne2019-10-031-165/+52
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* Whitespace cleanupAllen Byrne2019-10-031-159/+157
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* Remove incorrect textAllen Byrne2019-10-031-2/+1
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* HDFFV-10919 merge synchingAllen Byrne2019-10-023-174/+63
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* Whitespace and benign synchro changesAllen Byrne2019-10-023-407/+509
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* Fix missing option and incorrect closeAllen Byrne2019-09-241-2/+2
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* Whitespace updatesAllen Byrne2019-09-232-60/+59
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* Merge S3 code from develop to 1.10Allen Byrne2019-09-133-662/+1013
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* HDFFV-10876 link fix and compile issueAllen Byrne2019-08-271-8/+0
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* OESS-29 Update HD prefix and compare against developAllen Byrne2019-08-233-5/+5
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* Merge HD prefix and whitespace changes from developAllen Byrne2019-08-1812-710/+752
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* Merge fixes and code reconciliation wit developAllen Byrne2019-08-052-54/+54
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* Cleanup when merging to other branchesAllen Byrne2019-07-305-56/+26
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* HDFFV-10845, 10529 and CMake changes from developAllen Byrne2019-07-242-12/+5
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* Squash commit of options to build tools and testsDhvanil Popat2019-06-254-640/+1
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* HDFFV-10805 Merge SHARED ONLY option from developAllen Byrne2019-06-2010-141/+242
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* Fixed HDFFV-10586, HDFFV-10588, and HDFFV-10684Binh-Minh Ribler2019-01-311-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | Description: HDFFV-10586 CVE-2018-17434 Divide by zero in h5repack_filters Added a check for zero value HDFFV-10588 CVE-2018-17437 Memory leak in H5O_dtype_decode_helper This is actually an Invalid read issue. It was found that the attribute name length in an attribute message was corrupted, which caused the buffer pointer to be advanced too far and later caused an invalid read. Added a check to detect attribute name and its length mismatch. The fix does not cover all cases, but it'll reduce the chance of this issue when a name length is corrupted or the attribute name is corrupted. HDFFV-10684 H5Ewalk does not stop until all errors in the stack are visited The test for HDFFV-10588 has revealed a bug in H5Ewalk. H5Ewalk did not stop midway even when the call back function returns H5_ITER_STOP. This is because a condition is missing from the for loops in H5E__walk causing the callback functions unable to stop until all the errors in the stack are iterated. Quincey advised on the final fix. In this fix, "status" is switched to "ret_value" and HGOTO_ERROR to HERROR, and the for loops won't continue when "ret_value" is not 0. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test)
* Tools cleanupAllen Byrne2018-12-131-3/+3
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* Renamed h5repart's -family_to_sec2 to -family_to_single.Dana Robinson2018-11-231-19/+26
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* TRILAB-82 fix coverity high-impact issuesAllen Byrne2018-11-087-121/+130
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* Merge CMake changes from developAllen Byrne2018-10-231-1/+1
| | | Improved cross-compiling and toolchains
* HDFFV-10594, 10332, 10531Allen Byrne2018-09-264-96/+102
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* Update system commands with HD prefix and whitespaceAllen Byrne2018-08-283-198/+198
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* Merge from developAllen Byrne2018-07-311-1/+1
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* Fix for HDFFV-10333:Vailin Choi2018-07-261-131/+159
| | | | | | | | | 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-2310-20/+20
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '2b0fb7e3f1f7da5b23d430702493ed4fb7f87166': (21 commits) HDFFV-9739 only executes H5E tests in production Remove link flag from compile command fix typo Add release note Correct attribute location HDFFV-9739 fix copy testfiles command HDFFV-9739 remove obsolete test files HDFFV-9739 dup test file for concurrent tests HDFFV-9739 Fix autotools script HDFFV-9739 Change autotools test scripts Fix typo HDFFV-9739 Update test reference Update current windows test machines HDFFV-9739 Grab err number before API call HDFFV-9739 Add release note Adjust test names for concurrent tests Fix soversion HDFFV-9739 Fix copy name HDFFV-9739 factor out tests into separate JUnit Updated the threadsafety test to use error macros instead of asserts. ...
| * Fix MPI on Windows by adding MPI include folderAllen Byrne2018-05-0910-20/+20
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* | Changes made based on feedback from pull request #1039.Vailin Choi2018-05-147-19/+18
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-1412-105/+81
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits) GGC requires attribute before function Correct COMPILE defs usage Add missing module_dir property Text cleanup Correct sentence punctuation. Add release note. Use set_property for MT flag Correct command usage Remove APPEND Fix typo Add missing test lib add missing folder to path Fix another command revert Missed a command revert Revert to old style for LINK_FLAGS gen expr not working LINK_FLAGS must be separate property sets Fix link flags syntax Revert refactor link flags refactor link flags to interface Refactor link flags ...
| * Text cleanupAllen Byrne2018-05-082-42/+18
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| * TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-2610-63/+63
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* | Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-248-22/+23
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* TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-2011-11/+11
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* TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-1711-56/+21
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* Cleanup API context function usage.Quincey Koziol2018-03-191-7/+12
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-03-1825-390/+335
|\ | | | | | | | | | | merge_func_enter_vol Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
| * Merge pull request #931 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2018-03-121-16/+142
| |\ | | | | | | | | | | | | | | | | | | | | | develop * commit 'f08b8fa10e7bac5ae26e3b06f938d38ebb3f28e1': Enhancement to the tool h5clear (HDFFV-10360) Fix for HDFFV-10209 VDS SWMR test failure Free the object header when there are chksum retries.
| | * Enhancement to the tool h5clear (HDFFV-10360)Vailin Choi2018-03-121-16/+142
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| * | Change CMake min to 3.10Allen Byrne2018-03-0911-11/+11
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| * Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-2711-11/+11
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| * HDFFV-10412 fix typoAllen Byrne2018-02-211-1/+1
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| * HDFFV-10412 moved check back into normal pathAllen Byrne2018-02-211-20/+20
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