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* 1 10 Merges from develop (#424)Allen Byrne2021-03-0413-46/+50
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file
* 1 10 merge java copyright header changes (#392)Allen Byrne2021-03-012-6/+8
| | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder
* Hdf5 1 10 update license url part2 (#404)Larry Knox2021-03-0144-44/+44
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Modify temporary rpath for testing in java example scripts. (#230) * Fix undefined left shifting of negative numbers (#338) Undefined Bahavior Sanitizer errored here about left shifting negative numbers. * Update license url (#332) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - src and test directories. * Update license url part2 (#333) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test. * Update URL in source file Copyright headers for web. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Sean McBride <sean@rogue-research.com>
* 1 10 merges from develop (#298)Allen Byrne2021-02-044-85/+80
| | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms
* OESS-98 add CMake option to build plugins project within hdf5Allen Byrne2020-10-1610-30/+30
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* HDFFV-11096 Correct h5dump usage textAllen Byrne2020-10-052-7/+7
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* Source formattedAllen Byrne2020-10-0133-10204/+10502
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* Merge of clang-format changes from developAllen Byrne2020-09-3011-8/+137
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* Merge pull request #2785 in HDFFV/hdf5 from ↵Dana Robinson2020-08-171-3/+0
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '88ecc17474e86e67f0ce64ed0b36c0d10e93eb66': Removes email and Modifications sections
| * Removes email and Modifications sectionsDana Robinson2020-08-171-3/+0
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* | Merge pull request #2782 in HDFFV/hdf5 from ↵Dana Robinson2020-08-161-1/+1
|\ \ | |/ | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '4312f5ea1a611cef01e9ecfb57d7c287c9549249': Adds unsuffixed double warning changes from develop Minor normalizations with develop
| * Minor normalizations with developDana Robinson2020-08-161-1/+1
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* | Merge pull request #2778 in HDFFV/hdf5 from ↵Dana Robinson2020-08-161-1/+0
|\ \ | |/ | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '0ba794be38b908271e6a2d8f5e231e4b097f25e5': Normalizations with develop
| * Normalizations with developDana Robinson2020-08-161-1/+0
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* | Tag TRILABS-227 and fix MANIFESTAllen Byrne2020-08-151-4/+5
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-08-1510-15/+17
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | * commit 'c638d93f3e660ce669a36e50a02473aac126953d': Fixes missing chunk_info entry in CMake files Even more normalization with develop More normalizations with develop Misc normalizations with develop Normalization of perform directory with develop Brings monotonic timer changes from develop Brings Mirror VFD to 1.10 from develop Brings splitter VFD from develop Brings file locking changes from develop
| * Misc normalizations with developDana Robinson2020-08-1510-15/+17
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* | HDFFV-9984 Add merge/prune h5repack options for ext linksAllen Byrne2020-08-155-52/+132
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* More warnings reductionAllen Byrne2020-07-301-2/+0
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* Merge from dev of tools changesAllen Byrne2020-07-2224-1457/+1242
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* Merge pull request #2643 in HDFFV/hdf5 from ↵Vailin Choi2020-06-111-2/+7
| | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10961-h5clear-usage-statement-give to develop * commit '01b632c69ca1c97c2b0e1aaeeab1dd2362b580a6': Fix for HDFFV-10961: Couple changes to the tests' usage output files for h5clear. Fix for HDFFV-10961: add description to usage for --increment option.
* Removed trailing whitespace from source files.Dana Robinson2020-05-262-6/+6
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* TRILAB-192 - merge changes from developAllen Byrne2020-04-071-0/+2
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-04-062-16/+50
|\ | | | | | | | | * commit '8668195f417cb22df596e3d440da7502adae1597': H5repack bug fixes from develop
| * H5repack bug fixes from developJordan Henderson2020-04-032-16/+50
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* | TRILAB-192 merging warnings changes from developAllen Byrne2020-03-308-0/+22
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* Fix commentAllen Byrne2020-03-101-1/+1
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* Check sizeof type to use correct ref_typeAllen Byrne2020-03-092-38/+41
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* Fix h5ls attrregAllen Byrne2020-03-011-10/+38
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* Updated reference codeAllen Byrne2020-02-291-15/+90
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* Merge CMake and tools changes from developAllen Byrne2020-02-2729-903/+919
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* Merge from dev, sanitizer, fortran, warnings and tools idsAllen Byrne2020-02-115-15/+15
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* HDFFV-11014, fix the h5repack issue that misses a few attributes during the ↵Muqun Yang2020-02-101-1/+8
| | | | repacking. The flag that checks the object reference attribute is not updated properly. The fix is trivial. Just need to move the flag update line into the inner loop. Tested at Jelly. Also update the release.txt.
* tools perform and hid_t init settingsAllen Byrne2020-01-201-1/+2
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* merge intel warning fixKimmy Mu2020-01-091-3/+3
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* More whitespace changesAllen Byrne2019-10-031-165/+52
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* Whitespace cleanupAllen Byrne2019-10-031-159/+157
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* Remove incorrect textAllen Byrne2019-10-031-2/+1
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* HDFFV-10919 merge synchingAllen Byrne2019-10-023-174/+63
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* Whitespace and benign synchro changesAllen Byrne2019-10-023-407/+509
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* Fix missing option and incorrect closeAllen Byrne2019-09-241-2/+2
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* Whitespace updatesAllen Byrne2019-09-232-60/+59
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* Merge S3 code from develop to 1.10Allen Byrne2019-09-133-662/+1013
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* HDFFV-10876 link fix and compile issueAllen Byrne2019-08-271-8/+0
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* OESS-29 Update HD prefix and compare against developAllen Byrne2019-08-233-5/+5
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* Merge HD prefix and whitespace changes from developAllen Byrne2019-08-1812-710/+752
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* Merge fixes and code reconciliation wit developAllen Byrne2019-08-052-54/+54
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* Cleanup when merging to other branchesAllen Byrne2019-07-305-56/+26
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* HDFFV-10845, 10529 and CMake changes from developAllen Byrne2019-07-242-12/+5
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* Squash commit of options to build tools and testsDhvanil Popat2019-06-254-640/+1
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