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* 1 10 Merges from develop (#424)Allen Byrne2021-03-047-19/+23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file
* Hdf5 1 10 update license url part2 (#404)Larry Knox2021-03-0124-24/+24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Modify temporary rpath for testing in java example scripts. (#230) * Fix undefined left shifting of negative numbers (#338) Undefined Bahavior Sanitizer errored here about left shifting negative numbers. * Update license url (#332) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - src and test directories. * Update license url part2 (#333) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test. * Update URL in source file Copyright headers for web. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Sean McBride <sean@rogue-research.com>
* OESS-98 add CMake option to build plugins project within hdf5Allen Byrne2020-10-161-10/+10
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* Source formattedAllen Byrne2020-10-0118-5899/+5886
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* Merge of clang-format changes from developAllen Byrne2020-09-302-19/+94
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* Minor normalizations with developDana Robinson2020-08-161-1/+1
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* Normalizations with developDana Robinson2020-08-162-2/+2
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* Normalization of perform directory with developDana Robinson2020-08-159-14/+422
| | | | Brings over chunk_cache program
* Brings monotonic timer changes from developDana Robinson2020-08-151-267/+138
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* Removed trailing whitespace from source files.Dana Robinson2020-05-264-48/+48
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* Merge CMake and tools changes from developAllen Byrne2020-02-275-225/+263
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* Merge from dev, sanitizer, fortran, warnings and tools idsAllen Byrne2020-02-111-1/+1
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* tools perform and hid_t init settingsAllen Byrne2020-01-205-37/+43
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* Added new CMake options for testsAllen Byrne2020-01-192-154/+157
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* Fix CMake test macros and perform standalone testsAllen Byrne2020-01-128-61/+197
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* Merge branch 'hdf5_1_10' of https://git.hdfgroup.org/scm/~kmu/hdf5 into ↵kmu2020-01-092-9/+2
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| * Merge of --Wc++-compat changes from developDana Robinson2020-01-092-9/+2
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* | merge intel warning fixKimmy Mu2020-01-092-5/+5
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* Standalone doesn't use h5test implementation.Allen Byrne2019-12-201-0/+3
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* Remove duplicate instanceAllen Byrne2019-12-161-6/+0
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* HDFFV-10903 merge dev changes to 1.10Allen Byrne2019-09-181-1/+1
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* OESS-29 Fix HD prefix in performAllen Byrne2019-08-279-370/+374
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* OESS-29 Update HD prefix and compare against developAllen Byrne2019-08-232-12/+12
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* HDFFV-10845, 10529 and CMake changes from developAllen Byrne2019-07-243-25/+70
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* Merge from develop, mostly HDFFV-10845Allen Byrne2019-07-123-15/+27
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* Merge parallel static fix from developAllen Byrne2019-06-272-237/+0
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* remove duplicated functionAllen Byrne2019-06-211-0/+4
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* HDFFV-10805 Merge SHARED ONLY option from developAllen Byrne2019-06-203-27/+86
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* TRILAB-111 Update MPI CMakeAllen Byrne2019-02-131-2/+2
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* Refactor TIMEOUT valuesAllen Byrne2019-02-061-1/+1
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* TRILAB-82 fix coverity high-impact issuesAllen Byrne2018-11-081-2/+4
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* Update system commands with HD prefix and whitespaceAllen Byrne2018-08-281-35/+35
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* Merge pull request #1043 in HDFFV/hdf5 from ↵Dana Robinson2018-05-311-0/+684
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop * commit '1da9c5545c013ebc540ba3044810889d4acfa5be': Restored some unused #defines to the deprecated section of H5Dpublic.h. Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers. Updated commenting in the H5DO compat test. Stripped out most of the duplicated functionality in the H5DO compat test. * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines. * Fixed the error tests * Moved common functionality into helper functions Normalize with trunk prior to update merge Fixed a warning. Finished move of H5DOread/write_chunk calls to H5D. First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| * Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-05-151-27/+27
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| * \ Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-04-301-21/+19
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| * | | First stage of moving H5DOread/write_chunk() to src/ and makingDana Robinson2018-04-301-0/+684
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
* | | | Fix MPI on Windows by adding MPI include folderAllen Byrne2018-05-091-9/+9
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* | | TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-261-27/+27
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* | TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-201-1/+1
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* | TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-171-20/+18
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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-1/+1
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* Cleanup overuse of include filesAllen Byrne2018-02-142-14/+12
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* HDFFV-10385 rework java namesAllen Byrne2018-01-171-9/+0
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* Correct usage of MPI varsAllen Byrne2017-11-011-2/+2
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* Correct test DEPENDSAllen Byrne2017-10-251-2/+1
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* Cleanup cmake clean macrosAllen Byrne2017-10-031-1/+23
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* Make sure zip_perf program does not run concurrentlyAllen Byrne2017-07-261-0/+1
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* Remove duplicate definesAllen Byrne2017-05-042-18/+0
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-2522-127/+95
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
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