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* HDFFV-10632 update autotools test scripts to match cmakeAllen Byrne2018-12-069-61/+230
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* HDFFV=10632 test cleanupAllen Byrne2018-12-0615-168/+2
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-12-0520-205/+286
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '55e87e5b86aacbb37c57614cd2e869541291caad': (51 commits) Correct Windows build. Refactor allocating & releasing pass through wrapper objects. Fix typo Remove duplicated comment. Add a couple of missing prototypes for static routines, along with updating a comment from VOL plugin -> connector. Switch H5VL_class_value_t from unsigned to int, and add "invalid" ID value. Correct "make check-vol" regression test target. Switch H5VL_class_value_t from enum to unsigned integer Add support for "make check-vol", along with a few minor cleanups, etc. Refactor infrastructure for setting FAPL information from environment variables during testing, including connecting native, pass-through, and dynamically loaded VOL connectors. Also bring native and pass-through VOL connectors into alignment, removing the "H5VLnative_private.h" header. Remove example VOL connector, since it's been superceded by the pass-through VOL connector in the src subdirectory. Add pass-through VOL connector Update API tracing info for VOL functions and regenerate trace macros for VOL API calls. Added 'notify' callback for async requests; switched VOL class and info comparison to return comparison value as parameter, so they can return error values; "cancelled" -> "canceled"; switched order of 'wrap_object' and 'free_wrap_ctx' management callbacks. Add using FAPL from h5_fileaccess() to more tests. Remove unused test for unimplemented routine. Switch loc_params to VOL callbacks to pass struct by pointer instead of by value. Add info_to_str and str_to_info "management" callbacks for serializing and deserializing a connector's info object. Revert some of the changes to support the original property list value of metadata read attempts. Add VOL connector info to the flie access property list returned from H5Fget_access_plist(). Also, other misc. cleanups, etc. ...
| * Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-11-186-11/+440
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| * \ Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-11-121-2/+2
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| * | | Switch tool error output to match VOL changes within libraryQuincey Koziol2018-11-1220-205/+286
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| * | | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-11-0712-455/+434
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| * | | | Squashed commit of private branch changes to support stackable VOL plugins.Quincey Koziol2018-10-2520-27/+27
| | | | | | | | | | | | | | | | | | | | modified: test/dsets.c
* | | | | Fix special macro stdout as emptyAllen Byrne2018-12-051-0/+1
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* | | | | Need nonexistent file to skip stdout compareAllen Byrne2018-12-053-0/+3
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* | | | | HDFFV-10632 - split stderr and stdout in cmakeAllen Byrne2018-12-0348-64/+314
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* | | | HDFFV-10601: Some compiler doesn't support clock_gettime(). So I changed to ↵Songyu Lu2018-11-161-77/+25
| | | | | | | | | | | | | | | | use gettimeofday (HDgettimeofday in the HDF5 library).
* | | | Merge pull request #1316 in HDFFV/hdf5 from ↵Ray Lu2018-11-153-2/+469
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~SONGYULU/hdf5_ray:bugfix/HDFFV-10601-issues-with-chunk-cache-hash to develop * commit 'cd13d24e5140578a880aebe4e2d8b899179d0870': HDFFV-10601: I added error checking to the HDF5 functions. HDFFV10601: Adding performance test to verify the improvement. HDFFV-10601: I changed to a better way to calculate the number of chunks in a dataset. HDFFV-10601 Issues with chunk cache hash value calcuation:
| * | | | HDFFV-10601: I added error checking to the HDF5 functions.Songyu Lu2018-11-141-65/+161
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| * | | | HDFFV10601: Adding performance test to verify the improvement.Songyu Lu2018-11-133-2/+373
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* | | | Renamed h5repart's -family_to_sec2 to -family_to_single.Dana Robinson2018-11-143-9/+23
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* | | Fix target files for commandsAllen Byrne2018-11-091-2/+2
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-11-067-90/+102
|\ \ | | | | | | | | | | | | | | | | | | | | | * commit '1652a60fcbe9894d7c34a778fb24dce1979fb9a9': HDFFV-10605 Only test plugins if SHARED enabled Correct platforms Correct extlib depends Commit version changes for additional files for 1.11.3 snapshot release.
| * \ Merge pull request #1319 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developAllen Byrne2018-11-061-7/+7
| |\ \ | | | | | | | | | | | | | | | | * commit '81cb24ac1db0f4936b19067cdb7fa4e14e0d00db': Commit version changes for additional files for 1.11.3 snapshot release.
| | * | Commit version changes for additional files for 1.11.3 snapshot release.Larry Knox2018-11-061-7/+7
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| * | HDFFV-10605 Only test plugins if SHARED enabledAllen Byrne2018-11-066-83/+95
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* | TRILAB-82 fixed errors found in reviewAllen Byrne2018-10-241-0/+2
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* | TRILAB-81 coverity fixesAllen Byrne2018-10-175-365/+330
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* VOL FEATUREDana Robinson2018-10-1022-164/+326
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Dana Robinson2018-09-245-12/+24
|\ | | | | | | | | | | | | | | | | | | * commit '2618dc314b9e4875e6ece7ee8696846ac2d02183': Remove extra unneeded Remove libsettings from pregenerated block CMake changes for SKIPPED and flush tests Correct $withval usage in configure HDFFV-10332 Adjust checks and generation of files HDFFV-10332 Use pre-generated files
| * CMake changes for SKIPPED and flush testsAllen Byrne2018-09-245-12/+24
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* | Remainder of vol_normalization changes (dataset, attribute, files, objects).Dana Robinson2018-09-242-3/+3
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* Snapshot version 1.11 release 2.hdftest2018-09-201-7/+7
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* Develop normalization with vol_integration.Dana Robinson2018-09-194-194/+154
| | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* Removed 'VOL' versions of FUNC_ENTER macros as well as empty functionsDana Robinson2018-09-1811-138/+102
| | | | orginally intended to support the full SWMR feature.
* HD prefix and whitespaceAllen Byrne2018-08-282-37/+37
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* Add missing test optionAllen Byrne2018-07-241-1/+1
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* Add test file with unwritten datasetsAllen Byrne2018-07-242-4/+96
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* Merge branch 'develop' of ↵Larry Knox2018-07-1815-4/+277
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop
| * Changes based on feedback from pull request.Vailin Choi2018-07-122-3/+2
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| * Modifications made based on feedback from pull request.Vailin Choi2018-07-114-12/+31
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| * Fix for HDFFV-10333:Vailin Choi2018-07-1113-1/+256
| | | | | | | | | | | | | | | | | | 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump
* | Apply Cygwin pathches from Marco Atzeri.Larry Knox2018-07-181-0/+2
| | | | | | | | Commit Joe Lee's typo corrections for src/H5MF.c.
* | Revert "Merge pull request #1116 in HDFFV/hdf5 from ↵hdftest2018-06-241-7/+7
| | | | | | | | | | | | | | ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
* | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-041-0/+684
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| * Merge pull request #1043 in HDFFV/hdf5 from ↵Dana Robinson2018-05-311-0/+684
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop * commit '1da9c5545c013ebc540ba3044810889d4acfa5be': Restored some unused #defines to the deprecated section of H5Dpublic.h. Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers. Updated commenting in the H5DO compat test. Stripped out most of the duplicated functionality in the H5DO compat test. * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines. * Fixed the error tests * Moved common functionality into helper functions Normalize with trunk prior to update merge Fixed a warning. Finished move of H5DOread/write_chunk calls to H5D. First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| | * Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-05-1513-105/+99
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| | * \ Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-04-3014-290/+242
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| | * | | First stage of moving H5DOread/write_chunk() to src/ and makingDana Robinson2018-04-301-0/+684
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
* | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-2212-32/+36
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| * | | | Fix MPI on Windows by adding MPI include folderAllen Byrne2018-05-0912-32/+36
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* | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-1013-105/+99
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-04-301-2/+6
| |\ \ \ | | | |/ | | |/| | | | | | | | | | | | | | | | | * commit '1f8cb03e11a46f853881f45dac18eff2dd68401e': Fix errors in Makefile.am files that cause "make check" to repeat test, even when there are no changes to source files. (Also add a ggenerated script to the list of files cleaned up on 'make distclean') Further minor cleanups Checkpoint normalization against incoming hyperslab / selection / dataspace improvements.
| * | | TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-2613-105/+99
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* | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-0839-528/+527
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