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* HDFFV-10601: Some compiler doesn't support clock_gettime(). So I changed to ↵Songyu Lu2018-11-161-77/+25
| | | | use gettimeofday (HDgettimeofday in the HDF5 library).
* Merge pull request #1316 in HDFFV/hdf5 from ↵Ray Lu2018-11-153-2/+469
|\ | | | | | | | | | | | | | | | | | | ~SONGYULU/hdf5_ray:bugfix/HDFFV-10601-issues-with-chunk-cache-hash to develop * commit 'cd13d24e5140578a880aebe4e2d8b899179d0870': HDFFV-10601: I added error checking to the HDF5 functions. HDFFV10601: Adding performance test to verify the improvement. HDFFV-10601: I changed to a better way to calculate the number of chunks in a dataset. HDFFV-10601 Issues with chunk cache hash value calcuation:
| * HDFFV-10601: I added error checking to the HDF5 functions.Songyu Lu2018-11-141-65/+161
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| * HDFFV10601: Adding performance test to verify the improvement.Songyu Lu2018-11-133-2/+373
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* | Renamed h5repart's -family_to_sec2 to -family_to_single.Dana Robinson2018-11-143-9/+23
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* | Fix target files for commandsAllen Byrne2018-11-091-2/+2
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-11-067-90/+102
|\ | | | | | | | | | | | | | | * commit '1652a60fcbe9894d7c34a778fb24dce1979fb9a9': HDFFV-10605 Only test plugins if SHARED enabled Correct platforms Correct extlib depends Commit version changes for additional files for 1.11.3 snapshot release.
| * Merge pull request #1319 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developAllen Byrne2018-11-061-7/+7
| |\ | | | | | | | | | | | | * commit '81cb24ac1db0f4936b19067cdb7fa4e14e0d00db': Commit version changes for additional files for 1.11.3 snapshot release.
| | * Commit version changes for additional files for 1.11.3 snapshot release.Larry Knox2018-11-061-7/+7
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| * | HDFFV-10605 Only test plugins if SHARED enabledAllen Byrne2018-11-066-83/+95
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* | TRILAB-82 fixed errors found in reviewAllen Byrne2018-10-241-0/+2
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* | TRILAB-81 coverity fixesAllen Byrne2018-10-175-365/+330
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* VOL FEATUREDana Robinson2018-10-1022-164/+326
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Dana Robinson2018-09-245-12/+24
|\ | | | | | | | | | | | | | | | | | | * commit '2618dc314b9e4875e6ece7ee8696846ac2d02183': Remove extra unneeded Remove libsettings from pregenerated block CMake changes for SKIPPED and flush tests Correct $withval usage in configure HDFFV-10332 Adjust checks and generation of files HDFFV-10332 Use pre-generated files
| * CMake changes for SKIPPED and flush testsAllen Byrne2018-09-245-12/+24
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* | Remainder of vol_normalization changes (dataset, attribute, files, objects).Dana Robinson2018-09-242-3/+3
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* Snapshot version 1.11 release 2.hdftest2018-09-201-7/+7
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* Develop normalization with vol_integration.Dana Robinson2018-09-194-194/+154
| | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* Removed 'VOL' versions of FUNC_ENTER macros as well as empty functionsDana Robinson2018-09-1811-138/+102
| | | | orginally intended to support the full SWMR feature.
* HD prefix and whitespaceAllen Byrne2018-08-282-37/+37
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* Add missing test optionAllen Byrne2018-07-241-1/+1
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* Add test file with unwritten datasetsAllen Byrne2018-07-242-4/+96
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* Merge branch 'develop' of ↵Larry Knox2018-07-1815-4/+277
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop
| * Changes based on feedback from pull request.Vailin Choi2018-07-122-3/+2
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| * Modifications made based on feedback from pull request.Vailin Choi2018-07-114-12/+31
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| * Fix for HDFFV-10333:Vailin Choi2018-07-1113-1/+256
| | | | | | | | | | | | | | | | | | 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump
* | Apply Cygwin pathches from Marco Atzeri.Larry Knox2018-07-181-0/+2
| | | | | | | | Commit Joe Lee's typo corrections for src/H5MF.c.
* | Revert "Merge pull request #1116 in HDFFV/hdf5 from ↵hdftest2018-06-241-7/+7
| | | | | | | | | | | | | | ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
* | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-041-0/+684
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| * Merge pull request #1043 in HDFFV/hdf5 from ↵Dana Robinson2018-05-311-0/+684
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop * commit '1da9c5545c013ebc540ba3044810889d4acfa5be': Restored some unused #defines to the deprecated section of H5Dpublic.h. Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers. Updated commenting in the H5DO compat test. Stripped out most of the duplicated functionality in the H5DO compat test. * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines. * Fixed the error tests * Moved common functionality into helper functions Normalize with trunk prior to update merge Fixed a warning. Finished move of H5DOread/write_chunk calls to H5D. First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| | * Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-05-1513-105/+99
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| | * \ Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-04-3014-290/+242
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| | * | | First stage of moving H5DOread/write_chunk() to src/ and makingDana Robinson2018-04-301-0/+684
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
* | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-2212-32/+36
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| * | | | Fix MPI on Windows by adding MPI include folderAllen Byrne2018-05-0912-32/+36
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* | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-1013-105/+99
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-04-301-2/+6
| |\ \ \ | | | |/ | | |/| | | | | | | | | | | | | | | | | * commit '1f8cb03e11a46f853881f45dac18eff2dd68401e': Fix errors in Makefile.am files that cause "make check" to repeat test, even when there are no changes to source files. (Also add a ggenerated script to the list of files cleaned up on 'make distclean') Further minor cleanups Checkpoint normalization against incoming hyperslab / selection / dataspace improvements.
| * | | TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-2613-105/+99
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* | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-0839-528/+527
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| * | | Fix errors in Makefile.am files that cause "make check" to repeat test, evenQuincey Koziol2018-04-291-2/+6
| |/ / | | | | | | | | | | | | when there are no changes to source files. (Also add a ggenerated script to the list of files cleaned up on 'make distclean')
| * | TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-2013-13/+13
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| * | TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-1713-274/+222
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| * HDFFV-10444 fix soversion numbers for librariesAllen Byrne2018-04-105-6/+6
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| * Merge remote-tracking branch 'origin/develop' into merge_func_enter_volQuincey Koziol2018-03-291-0/+6
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| | * Add missing test fileAllen Byrne2018-03-281-0/+2
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| | * Add missing test which is in autotoolsAllen Byrne2018-03-271-0/+4
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| * | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-03-1880-3259/+4868
| |\ \ | | |/ | | | | | | | | | | | | merge_func_enter_vol Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
| * | Add API context interface and use it throughout the library.Quincey Koziol2018-03-1523-211/+258
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* | | HDFFV-10444 fix so numbers and merge java test changesAllen Byrne2018-04-105-6/+6
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* | | Updated version to 1.10.3-snap0lrknox2018-03-141-7/+7
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