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* Update tools hid_t declarations with H5I_INVALID_HIDAllen Byrne2020-01-1321-538/+544
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* io_timer.c uses a parallel lib functionAllen Byrne2020-01-102-4/+3
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* Fix standalone compile issuesAllen Byrne2020-01-093-2/+137
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* Merge pull request #2244 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings ↵Kimmy Mu2020-01-091-2/+2
|\ | | | | | | | | | | | | to develop * commit '6b1b4b3c0bdd803835efe8c531965bb9900a5363': fix test assert fail error
| * fix test assert fail errorkmu2020-01-091-2/+2
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* | Merge pull request #2071 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings ↵Kimmy Mu2020-01-067-23/+23
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '0a2bb11b248df6841daabca3970df5d8504adfc7': address problems from comments fix and address comments change according to previous comments add missing piece remove unnecessary check macro fix intel compile warnings Revert "fix warnings from Intel compiler" Revert "fix warnings and some text alignment" Revert "let hdf5 pick up the right compiler in Intel environment" Revert "fix issues from previous PR comments" Revert "using a different MACRO" using a different MACRO fix issues from previous PR comments let hdf5 pick up the right compiler in Intel environment fix warnings and some text alignment fix warnings from Intel compiler
| * fix and address commentskmu2019-12-111-1/+1
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| * Merge branch 'develop' into bugfix/intel_warningskmu2019-12-094-10/+4
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| * | remove unnecessary check macrokmu2019-12-064-13/+10
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| * | fix intel compile warningskmu2019-12-047-23/+26
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* | | Clean up tools warnings introduced by H5TOOLS_ERR_INIT macroJordan Henderson2019-12-311-1/+1
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* | | Add MPI libs to standalone perfAllen Byrne2019-12-221-2/+2
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* | | Grep needs to search error fileAllen Byrne2019-12-221-1/+1
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* | | Correct flaws in test scripts and filesAllen Byrne2019-12-223-10/+12
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* | | grep for failure text in error stackAllen Byrne2019-12-221-1/+37
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* | | Add list to function argAllen Byrne2019-12-211-1/+1
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* | | Test files for new ref typesAllen Byrne2019-12-211-0/+13
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* | | h5diff test script filesAllen Byrne2019-12-212-0/+4
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* | | Add ref changes to test scriptAllen Byrne2019-12-211-1/+4
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* | | Standalone doesn't use h5test implementation.Allen Byrne2019-12-201-0/+3
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* | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-12-201-1/+1
|\ \ \ | | | | | | | | | | | | | | | | | | | | * commit 'b55a584fd5b3aac6f2514fba41a6182030b497ae': In portable shell scripts (using #!/bin/sh) we have to use single square brackets, [ ], instead of the bash-ism double square brackets, [[ ]]. Make this script work on hosts where PERL is not installed at /usr/bin/perl.
| * | | In portable shell scripts (using #!/bin/sh) we have to use single squareDavid Young2019-12-191-1/+1
| | | | | | | | | | | | | | | | brackets, [ ], instead of the bash-ism double square brackets, [[ ]].
* | | | HDFFV-10980 - h5diff uses new ref APIsAllen Byrne2019-12-196-6/+105
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* | | Remove duplicate instanceAllen Byrne2019-12-161-4/+0
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* | | Fix issues found with ONLY_SHARED_LIBS optionAllen Byrne2019-12-112-2/+2
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* | | HDFFV-10876 Update dump to match DDL specAllen Byrne2019-12-053-0/+100
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* | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-12-053-10/+3
|\ \ \ | | |/ | |/| | | | | | | * commit 'c7b3d6d6a5c1d376812e17c0ddb26f55334a2c59': Yanked -Wc++-compat from the flags used to build the C library in both the Autotools and CMake.
| * | Yanked -Wc++-compat from the flags used to build the C library in bothDana Robinson2019-12-043-10/+3
| | | | | | | | | | | | the Autotools and CMake.
* | | Update reference files and fix int as stringAllen Byrne2019-12-033-31/+31
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* | | Update to new error textAllen Byrne2019-12-022-6/+6
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* | | Update reference files to latest outputAllen Byrne2019-12-023-108/+45
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* | Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings ↵David Young2019-11-271-0/+1
|/ | | | level and fixing some code.' (commit 5c911d8baf3)"
* Delete an unused variable.David Young2019-11-131-1/+0
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* Merge pull request #1984 in HDFFV/hdf5 from ~DYOUNG/netbsd:develop to developDavid Young2019-11-051-2/+2
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '0b721858e46a317c370a24115032d5be41688f67': Make these scripts relocatable again: derive a relative path for the original installation prefix from the examples prefix. Use that relative path to locate the current installation prefix, always. Fall back to an absolute installation prefix if the relative path cannot be derived. Get the path to prefix right: needs a ../ to back out of subdirectory c/. Make this script relocatable again: derive a relative path for the original installation prefix from the examples prefix. Use that relative path to locate the current installation prefix, always. Fall back to an absolute installation prefix if the relative path cannot be derived. Let us override the examples directory using --with-examplesdir=DIR. This is handy for NetBSD where HDF5 examples are installed by convention in $prefix/share/examples/hdf5/ rather than in ${prefix}/share/hdf5_examples/, which is the HDF5 default. Follow longstanding execv convention for compatibility with NetBSD. Under the examples directories, always find the installed HDF5 executables and scripts using @prefix@ instead of a relative path, because the number of ../ in the relative path will be different on NetBSD than on other systems. Make the HDF5 configure script grok NetBSD. For portability, insulate the HDF5 library from some system macros. Not every system has perl installed in /usr/bin/, so change the shebang (#!) line to `/usr/bin/env perl` to locate perl on the PATH. For portability, use the POSIX sh(1) string-comparison operator `=` instead of `==`.
| * For portability, use the POSIX sh(1) string-comparison operator `=`David Young2019-10-031-2/+2
| | | | | | | | instead of `==`.
* | Fix MPI test dependsAllen Byrne2019-10-231-1/+1
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* | Update format and fix missing prefixAllen Byrne2019-10-211-185/+112
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* | Improvements in response to Allen's suggestions.Larry Knox2019-10-091-12/+12
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* | Corrections and improvements to testh5dump.sh.in changes.Larry Knox2019-10-091-34/+10
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* | Fix errors in testh5dump.sh tests that grep for reference error messages.Larry Knox2019-10-091-3/+33
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2019-10-084-40/+40
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '4c558700ab33934e7358483c5d20fea4823baf9e': Update RELEASE.txt for reference changes Fix reference type comparison in h5dump Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim() Add new H5R API that abstracts object, region and attribute reference types Remove ability to loc by ref from H5VL layer Add support for retrieving object name by token Add H5VL_OBJECT_GET_TYPE to get object type Add H5VL_MAX_TOKEN_SIZE and H5VL_token_t Adapt Jerome's "file info" H5VL 'get' query to retrieve container token info. Fix H5VL_blob_get to return size of blob Add 'blob' callbacks to VOL, along with a native implementation to store them in the global heap, and changed the VL datatype conversion code to use blobs. Remove debugging logic from the new t_bigio test Expanded t_bigio.c to include Jordan's test from HDFFV-10539 Another cleanup pass as suggested by the reviewers. Fix some typos and remove an unused prototype from H5Sprivate.h At the suggestion of the PR reviewers, moved the mpio_create_large_type to H5mpi.c and renamed the function appropriately. Also moved some support functions to set and get the vvalue where we transistion to using derived datatypes. Made code review edit suggested by Jerome, plus various code updates to files that I touched to eliminate compile warnings (on my Linux box). No functional changes, just removed some tab characters Make the initial bug fixes to allow >2GB writes with Independent IO
| * | Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim()Jerome Soumagne2019-10-084-40/+40
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* | Change reference test to grep for specific errorAllen Byrne2019-10-071-3/+3
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* HDFFV-10919 merge synchingAllen Byrne2019-10-021-5/+5
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* HDFFV-10918 add tests for h5repack ext storageAllen Byrne2019-10-012-1/+121
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* Update versioning to next major versionAllen Byrne2019-09-251-1/+2
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* Update develop branch version to 1.13.0 after creation of hdf5_1_12Larry Knox2019-09-251-7/+7
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* Merge branch 'develop' of ↵Jacob Smith2019-09-241-0/+4
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage
* | Update to current external file population.Jacob Smith2019-09-241-13/+19
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* | Merge branch 'develop' of ↵Jacob Smith2019-09-2353-3382/+2189
|\ \ | |/ | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage
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