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* Create a new branch for the September Subfiling deliverableRichard Warren2020-09-2579-1046/+3177
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* Fix for HDFFV-10961:vchoi2020-06-112-4/+16
| | | | Couple changes to the tests' usage output files for h5clear.
* Removed HDgets macros since gets was deprecated in C99 and removedDana Robinson2020-05-102-2/+2
| | | | in C11 (gets() is not used in our repo).
* Protected H5Oset_comment() in h5dump test generator.Dana Robinson2020-04-281-24/+60
| | | | (Assumes environment variable overrides default VOL connector)
* Fixed pio_perf const pointers.Dana Robinson2020-04-271-4/+4
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* Further updates to the tools warnings fixes from code review.Dana Robinson2020-04-271-1/+4
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* Fixes for warnings in the tools code.Dana Robinson2020-04-2512-404/+677
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* Merge pull request #2532 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-2311-0/+127
|\ | | | | | | | | | | | | | | to develop * commit '785bd0975ba13c3033820d0fc809da963fcd54ca': Fixed h5diff command-line parameters to use 1 and 2 instead of src and dst. Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp.
| * Fixed h5diff command-line parameters to use 1 and 2 instead of srcDana Robinson2020-04-2210-100/+100
| | | | | | | | and dst.
| * Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp.Dana Robinson2020-04-2111-0/+127
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* | Trim trailing whitespaceQuincey Koziol2020-04-2012-110/+110
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* Changed identifiers and command-line options from "id" to "value" in toolsDana Robinson2020-04-141-4/+4
| | | | code to be in agreement with H5VL API terminology.
* Updated test ddl files so CMake passes after h5dump failures.Dana Robinson2020-04-061-1/+1
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* Skip testing of passthrough VOL connector in a Family File tools testJordan Henderson2020-04-031-1/+1
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* Fix latent bug in h5repack options file readingJordan Henderson2020-03-291-1/+1
| | | | Add 'enable-error-stack' option to h5format_convert
* Update Tools library to be better compatible with VOL connectorsJordan Henderson2020-03-174-7/+19
| | | | | | | | | | | | | | | | | | | | | Modify h5repack to integrate with VOL connectors Update tools library to accomodate VOL connectors Update logic in h5tools_fopen for VOL connectors Add command-line options to h5repack for specifying in/out VOL connectors Implement h5tools_set_vol_fapl Fix library shutdown issue Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme Avoid H5Ocopy in h5repack when using different VOL connectors Update h5tools_test_utils.c for ROS3 and HDFS integration
* Fix standalone linkAllen Byrne2020-02-253-4/+5
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* HDFFV-11036 add file compare test processAllen Byrne2020-02-241-8/+52
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* TRILAB-142 Change minimum CMake version to 3.12Allen Byrne2020-02-2114-43/+37
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* H5_HAVE_PARALLEL, _DEBUG_API, etc. Add attributes to some variables andDavid Young2020-02-101-1/+1
| | | | parameters that are unused under some configurations.
* Merge pull request #2318 in HDFFV/hdf5 from ↵David Young2020-01-291-3/+2
|\ | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-1 to develop * commit 'fa1b2f6ef35c459c9f74ead885c119ae7f61c056': Reduce differences between my -Werror branch and `develop`:
| * Reduce differences between my -Werror branch and `develop`:David Young2020-01-291-3/+2
| | | | | | | | | | | | | | | | Rename index -> idx, fileno -> fnumber, fileno -> fno to avoid GCC shadowed declaration warnings about index(3). Convert #pragma GCC diagnostic push/pop/ignored to the HDF5 library's H5_GCC_DIAG_OFF()/H5_GCC_DIAG_ON() macros.
* | Merge pull request #2321 in HDFFV/hdf5 from ↵David Young2020-01-291-3/+11
|\ \ | | | | | | | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-3 to develop * commit 'f19e06b59ee53f17465a7b5974c25c3245a40d9a': testpar/t_2Gio.c: Fix a typo that I think was introduced by a previous warnings PR. An array element was assigned to itself---shape[2]Â =Â shape[2];---instead of being assigned to chunk[2].
| * | testpar/t_2Gio.c: Fix a typo that I think was introduced by aDavid Young2020-01-291-3/+11
| |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | previous warnings PR. An array element was assigned to itself---shape[2]Â =Â shape[2];---instead of being assigned to chunk[2]. fortran/src/H5Pf.c: move conditional compilation controlled by H5_NO_DEPRECATED_SYMBOLS outside of a function for readability. fortran/src/H5match_types.c: put a variable's declaration under the same conditional compilation (H5_FORTRAN_HAVE_C_LONG_DOUBLE) as its use. For now, skip compilation of some unused debug dump routines in the JNI. While I'm in the JNI, delete a set-but-unused variable. src/H5Z.c: condition a variable declaration on H5_NO_DEPRECATED_SYMBOLS so that it's not declared but unused or vice versa. test/cache_common.h: add an #include in to get some symbols we need to avoid implicit declaration warnings. test/dsets.c: use a more conventional conditional-compilation syntax. test/dt_arith.c, test/fillval.c: initialize a bunch of uninitialized variables before use. test/vfd.c: pass the expected type of `void **` to posix_memalign(3) instead of `int **`. testpar/t_bigio.c: explicitly compare with 0 instead of using ! when "equal to 0?" is the question not "is false?" Repair some indentation while I'm here. testpar/testpar.h: repair misaligned line-continuation backslashes in a macro that probably should be a function so that we don't have to fiddle with the line continuation to begin with. tools/src/h5repack/h5repack_main.c: fix some compiler fussing about enums. tools/test/perform/pio_engine.c: the compiler fusses if you cast a function call returning double directly to off_t. It's ok if you cast a variable that's a double to off_t, however. Write and use a new function, sqrto(), to avoid the cast warnings.
* | Merge pull request #2319 in HDFFV/hdf5 from ↵Allen Byrne2020-01-2917-246/+144
|\ \ | |/ |/| | | | | | | | | | | ~BYRN/hdf5_adb:bugfix/HDFFV-11011 to develop * commit 'c8096118d5edd9f27ff0f6180a4dde4c10aafda7': HDFFV-11011 - merge include list HDFFV-11011 correct issues with target file extension
| * HDFFV-11011 correct issues with target file extensionAllen Byrne2020-01-2817-246/+144
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* | Merge pull request #2311 in HDFFV/hdf5 from ~KMU/hdf5:misc to developKimmy Mu2020-01-285-65/+99
|\ \ | |/ |/| | | | | | | | | | | | | * commit '406330addf45529ecdd088f4d22e9aab9a03661d': rename macro change condition pick up from Dave's fix leave Wswitch-default for later fix fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, Wsign-compare, Wmisleading-indentation, Wshadow
| * change conditionkmu2020-01-271-1/+1
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| * fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, ↵kmu2020-01-275-65/+99
| | | | | | | | Wsign-compare, Wmisleading-indentation, Wshadow
* | Remove cmake macros from valgrind testsAllen Byrne2020-01-252-104/+109
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* | Revert "Revert "Moved -Wunsuffixed-float-constants to the developer warnings.""Dana Robinson2020-01-231-8/+6
|/ | | | This reverts commit 6486e06545bf637d46e18a787395542f4fca143a.
* squash cast warning fixkmu2020-01-235-138/+148
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* merge and fix conflictkmu2020-01-2355-986/+1357
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| * Merge pull request #2295 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/float to developKimmy Mu2020-01-231-0/+4
| |\ | | | | | | | | | | | | | | | | | | * commit '9afaf94bef740f89958a1a8aae369d5f607845f4': not use hdf5 private header fix float type cmp warning fix float type cmp warning
| | * not use hdf5 private headerkmu2020-01-221-1/+3
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| | * fix float type cmp warningkmu2020-01-221-0/+2
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| * | Merge pull request #2292 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/prototype to ↵Kimmy Mu2020-01-231-2/+0
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '9f80ffa1f1908975b3100814b2529bf779521e13': fix missing prototype warning
| | * | fix missing prototype warningkmu2020-01-211-2/+0
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| * | | merge and fixkmu2020-01-217-42/+101
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| | * | Merge pull request #2269 in HDFFV/hdf5 from ↵Dana Robinson2020-01-182-35/+94
| | |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:stack_size_warnings to develop * commit '44739ccd4715cc9e15595575700e945341fcdbcc': Tidying from code review. Fixed stack and frame size warnings. Not complete, but fixes most of the easier cases.
| | | * \ Merge branch 'develop' into stack_size_warningsDana Robinson2020-01-1740-744/+909
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| | | * | | Fixed stack and frame size warnings. Not complete, but fixes most ofDana Robinson2020-01-152-35/+94
| | | | | | | | | | | | | | | | | | | | | | | | the easier cases.
| | * | | | Correct standalone function attributesAllen Byrne2020-01-172-4/+4
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| | * | | Squashed commit of the token_refactoring branch:Dana Robinson2020-01-163-3/+3
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| * | | | merge and fix conflictkmu2020-01-1934-789/+823
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| | * | | HDFFV-11001 need to qualify all by parallel or serial typesAllen Byrne2020-01-1512-191/+196
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| | * | | HDFFV-11001 Add fine control over testingAllen Byrne2020-01-1511-16/+36
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| | * | | Update tools hid_t declarations with H5I_INVALID_HIDAllen Byrne2020-01-1321-538/+544
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| * | | | merge and fix conflictskmu2020-01-1427-150/+477
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| | * | | io_timer.c uses a parallel lib functionAllen Byrne2020-01-102-4/+3
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