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* [svn-r2794] Purpose:Albert Cheng2000-11-031-1/+3
| | | | | | | | | | | | | | | | "bug fix" Description: the h5ls tests sometimes failed because the tool sometimes prints the tool name in the help message as "lt-h5ls" while the expected result has it as "h5ls". This was the tools pulled its name from argv[0]. Solution: Hardcode the progname as "h5ls" and blocked out the code that pulls the program name from argv[0]. The better solution is to find a way to create the real binary with the orginal tool name. Platforms tested: linux
* [svn-r2790] Purpose:Albert Cheng2000-11-024-15/+74
| | | | | | | | | | | | | | | | new feature Description: h5tools.c: Created h5tools_init() and h5tools_close() for the initialization of the h5tools library and closing of it. With this, the rawdatastream and other internal structures can be initialized properly. h5tools.h: added prototypes for h5tools_init and h5tools_close. h5dump.c: h5ls.c: Added the calls for h5tools_init() and h5tools_close(). Platforms tested: IRIX64 -64 parallel and Linux
* [svn-r2785] ./hdf5/tools/h5ls.cRobb Matzke2000-10-311-5/+0
| | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (main) Backed out last change -- h5ls is a serial application and is never run with mpirun.
* [svn-r2781] ./hdf5/tools/h5ls.cRobb Matzke2000-10-311-0/+4
| | | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (main) Added calls to MPI_Init() and MPI_Finalize() for parallel versions in order to prevent errors about unrecognized command-line options.
* [svn-r2779] ./hdf5/tools/testfiles/tnestcomp-1.lsRobb Matzke2000-10-311-4/+4
| | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> Expected h5ls output.
* [svn-r2778] ./hdf5/tools/testfiles/tcomp-1.lsRobb Matzke2000-10-311-4/+6
| | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> Expected h5ls output.
* [svn-r2777] ./hdf5/tools/testfiles/tall-2.lsRobb Matzke2000-10-311-3/+7
| | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> Expected h5ls output.
* [svn-r2776] ./hdf5/tools/h5ls.cRobb Matzke2000-10-311-0/+7
| | | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (dump_dataset_values) The `float' and `double' values are displayed with the full precision instead of just the default `%g'.
* [svn-r2771] Purpose:Bill Wendling2000-10-311-381/+390
| | | | | | Reformatting Platforms tested: Linux
* [svn-r2770] Robb Matzke2000-10-3115-0/+1319
| | | | | | | | | | | | Purpose: Testing Description: The h5ls test script only looked at exit status. Solution: Created expected output files and compare actual output with expected output. Platforms tested: i686-pc-linux
* [svn-r2769] ./hdf5/tools/testh5ls.shRobb Matzke2000-10-311-19/+29
| | | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (verbose) Compares output to expected files. This should work just fine because we're not using the `-v' option which prints datatypes in a machine-dependent way.
* [svn-r2768] ./hdf5/tools/h5tools.hRobb Matzke2000-10-311-292/+293
| | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> Reindented.
* [svn-r2767] ./hdf5/tools/h5tools.cRobb Matzke2000-10-311-17/+29
| | | | | | | | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (h5dump_sprint) The whitespace added for indentation after the line-feed kludge is performed only if a line-feed was actually inserted. This fixes funny-looking h5ls output that had ` %s' sequences appearing in nested compound datatypes. Also added a prominent warning in the code to indicate that when a line-feed is inserted into the string that column number calculations will be incorrect and object indices will be missing.
* [svn-r2738] Purpose:Bill Wendling2000-10-251-5/+11
| | | | | | | | | | | Bug Fix Description: People need to type in the full-path to the attribute/dataset/etc. and weren't being told to do so by the "usage" statement. Solution: Added an example and changed <names> to <path> to be more explicit...
* [svn-r2737] Purpose:Bill Wendling2000-10-252-70/+337
| | | | | | | | | | | | Feature Description: Allow dumping of variable length records. This is a first-time stab at this. It doesn't break any tests on my Linux box and it does output the variable length data, but it might look ugly (it doesn't handle new-lines as of yet)...I'm open to suggestions on what should be done next, what new features to add/remove... Platforms tested: Linux
* [svn-r2733] Purpose:Albert Cheng2000-10-242-0/+2697
| | | | | | | | | | | New tests Description: Added a new test file (tsaf.h5) for h5dump and h5ls. The test file was created by lib SAF team. This file used to cause previous version of hdf5 tools to core dump. tsaf.ddl is the expected output from h5dump. Platforms tested: IRIX64 -64, linux
* [svn-r2732] Purpose:Albert Cheng2000-10-242-0/+6
| | | | | | | | | | New tests Description: Added a new test file (tsaf.h5) for h5dump and h5ls. The test file was created by lib SAF team. This file used to cause previous version of hdf5 tools to core dump. Platforms tested: IRIX64 -64, linux
* [svn-r2724] Purpose:Albert Cheng2000-10-242-1/+120
| | | | | | | | | | | | | | new feature Description: h5ls was not tested Solution: Added a test script, testh5ls.sh, to give h5ls some tests. Since the output from h5ls is sometime machine dependent (e.g., Datatypes), can not compare them with expected output. For now, run it against various hdf5 binary files. If it exits with 0, consider it passes. Platforms tested: IRIX64, eirene, arabica.
* [svn-r2723] Purpose:Albert Cheng2000-10-241-34/+36
| | | | | | | | | tidy it up Description: Change the variable names so that it looks more generic. Plan to make it a generic script test template. Platforms tested: IRIX64-64, linux, solaris 2.7
* [svn-r2722] Purpose:Quincey Koziol2000-10-241-1/+1
| | | | | | | | | | Feature symmetry Description: A while ago I needed to get the 'type' of data being accessed during writes to the VFL driver, so I put in code to get the information down there. Albert asked for the same information during reads, so I've added that in. Tested: FreeBSD 4.1.1 (hawkwind)
* [svn-r2691] MuQun Yang2000-10-186-24/+178
| | | | | | | | | | | | | | | | | | Purpose: 1. fix multiple defination warnings at sgi platform 2. adding chunking information from hdf4 to hdf5 property list. Description: 1. Orginally global varibles were defined at one header file and this header file were included by other .c file and .h file so multiple warnings are generated. 2. Chunking information was not included in the previous version. Solution: 1. use "extern" to define global variables at h4toh5util.h file and define global variables at h4toh5main.c 2. retrieve the chunking info from sdgetchunkinfo and GRgetchunkinfo and store these information into hdf5 property list. Platforms tested: eirene,arabica,paz,gondolin
* [svn-r2682] Purpose:Albert Cheng2000-10-131-3/+3
| | | | | | | | | | Bug fix Description: gmake check had been failing because of errors in the Makefile. Solution: Fixed it so that libtools.a got build first. Platforms tested: Eirene (Linux)
* [svn-r2680] Purpose:Albert Cheng2000-10-135-4/+6
| | | | | | | | | | | | | | | | | | | | Bug fix (ID 419) Description: Converted strings class types (in dataset and attributes) to HDF4 type of DFNT_INT8. Should have been DFNT_CHAR type. Solution: h5toh4.c: Changed the HDF4 type from DFNT_INT8 to DFNT_CHAR type. Converted all hdf5 strings (be it NULLTERM, NULLPAD, SPACEPAD) all to fixed width space padded HDF4 DFNT_CHAR. testh5toh4: Added the testing of $HDF_NOCLEANUP before cleaning away the result files. testfiles/Expected/tattr.hdf: testfiles/Expected/tstr.hdf: testfiles/Expected/tstr2.hdf: Updated with the corrected DFNT_CHAR type. Platforms tested: Solaris 2.7, Linux, Irix 6.5.
* [svn-r2678] MuQun Yang2000-10-121-10/+28
| | | | | | | | | | | Purpose: fixing output format of character array converted from hdf4 vdata. Description: Now one dimensional chactacter array can be outputed as one H5 string instead of string of array before. Solution: modify gen_h5comtype() so that when we detect the datatype is hdf5 string, we will merge hdf4 fieldorder into H5T string size and output the whole character array into hdf5 string(with string size = size of the array length). Platforms tested: eirene(LINUX), arabica(sun 5.6)
* [svn-r2676] MuQun Yang2000-10-121-0/+0
| | | | | | | | | | Purpose: Update the test file vg.h5 Description: Solution: Platforms tested: eirene(LINUX),arabica,baldric(SUN 5.6),paz(IRIX6.5),gondolin(DEC),opus(HP-UX11)
* [svn-r2675] MuQun Yang2000-10-123-26/+27
| | | | | | | | | | | | Purpose: fix "zero memory" routine and change dimensional scale name size to MAX_DIM_NAME Description: change bzero into h4toh5_ZeroMemory change dimensional scale name size(orginally MAX_NC_NAME) to MAX_DIM_NAME at converter. Solution: see description Platforms tested: arabica,baldric,gondolin(DEC),opus(HP 11),eirene(Linux),paz(IRIX6.5)
* [svn-r2674] MuQun Yang2000-10-123-8/+35
| | | | | | | | | | | | | | | | | Purpose: 1. fix size of dimensional name list so that the size of dimensional name in dumper output will not change because of different versions of hdf library(h4toh5util.h and h4toh5sds.c). 2. fix bzero routine for windows platform(h4toh5util.h,h4toh5util.c,h4toh5anno.c,h4toh5main.c, h4toh5sds.c) Description: 1. change the MAX_DIM_NAME into 276(MAX_NC_NAME +dimension group name) and hopefully we will not expand the size of MAX_NC_NAME(currently 256) for a long time. 2. create a new routine(h4toh5_ZeroMemory) to zero out memory. Use ZeroMemory in windows and bzero at UNIX. Solution: see Description. Platforms tested: LINUX(eirene),WINDOWS 2000, sun 5.6(baldric and arabica),HP-UX11(opus),DEC(gondolin),IRIX 6.5(paz).
* [svn-r2653] Purpose:Quincey Koziol2000-10-101-1/+3
| | | | | | | | | No change. Description: Must've added some debuging printf's and then took them out in a way which triggered CVS. Platforms tested: Solaris 2.6 (baldric) & FreeBSD 4.1.1 (hawkwind)
* [svn-r2643] Purpose:Bill Wendling2000-10-092-7/+173
| | | | | | | | | | | | Adding Testing Description: Alignment when putting elements in a compound datatype can be off. Solution: This was a bug which I'd fixed. Here's a program to exercise the bug. Platforms tested: Linux
* [svn-r2637] Purpose:Bill Wendling2000-10-061-803/+756
| | | | Format changes
* [svn-r2636] Purpose:Quincey Koziol2000-10-051-1/+1
| | | | | | | | | | Bug Fix Description: Test was not detecting hdp tool from HDF 4.1r4 correctly. Solution: Modified test to detect HDF4.1r[3-9] correctly. Platforms tested: FreeBSD 4.1.1 (hawkwind)
* [svn-r2634] Purpose:Bill Wendling2000-10-051-22/+36
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix Description: In the h5dump_fixtype function, when users created a COMPOUND datatype, the alignment would be off somewhat. Solution: The alignment was being set after insertion. I changed this code: for (i = 0, offset = 0; i < nmembs; i++) { H5Tinsert_array(m_type, name[i], offset, ndims[i], dims + i * 4, NULL, memb[i]); for (j = 0, nelmts = 1; j < ndims[i]; j++) nelmts *= dims[i * 4 + j]; offset = ALIGN(offset, H5Tget_size(memb[i])) + nelmts * H5Tget_size(memb[i]); } to: for (i = 0, offset = 0; i < nmembs; i++) { if (offset) offset = ALIGN(offset, H5Tget_size(memb[i])); H5Tinsert_array(m_type, name[i], offset, ndims[i], dims + i * 4, NULL, memb[i]); for (j = 0, nelmts = 1; j < ndims[i]; j++) nelmts *= dims[i * 4 + j]; offset += nelmts * H5Tget_size(memb[i]); } The alignment is now calculated before the insertion. Platforms tested: Solaris, Linux
* [svn-r2632] Purpose:Bill Wendling2000-10-042-37/+48
| | | | | | | | | | | | | | Bug Description: The testh5toh4 was removing all .h5 files from the testfiles directory, however, with the addition of testh4toh5, we need some .h5 files in there. Solution: Changed the scripts so that an output directory is created for all of the processed files. This is removed after the test is finished. Platforms tested: Linux
* [svn-r2627] Purpose:Albert Cheng2000-10-021-1/+1
| | | | | | | | | | | | Bug fix Description: Attempted to close rawdatastream even if it has not been used to open a new file. Many systems tolerated the NULL value but not FreeBSD. Solution: Check for the NULL value too. Platforms tested: hawkwind (freeBSD) and modi4 parallel.
* [svn-r2626] Purpose:Albert Cheng2000-09-303-2/+57
| | | | | | | | | | | | | | | | | | | | New Feature Description: Add -o option to h5dumper. It displays the raw data of datasets to a separate output file. Add a feature to h5tools library that it uses the FILE *rawdatastream as the stream for the display of datasets raw data. Solution: Define an "extern FILE *rawdatastream" in h5tools.h and declare it in h5tools.c. This way, it would work even if an application does not explicitely declare it. Tried to initialized it to stdout as FILE *rawdatastream = stdout; but Linux gcc rejected it though all other platforms+compilers accepted it fine. For now, put in a kludge to set it right before it is used. Need a safer way to initialize it. Platforms tested: arabica, eirene, modi4 -64.
* [svn-r2625] Purpose:Albert Cheng2000-09-301-1/+14
| | | | | | | | | | | | | | | | | | | | Bug fix and feature Description: It could not find a working h5dump to process the hdf5 files. This could be because h5dump is not installed in $PATH or a disfunctional one is found. (E.g. arabica:/usr/sdt/bin/h5dump does not work.) Setting it to ./h5dump or $PWD/h5dump does not work because when h5dump is used, it has "cd testfiles", a different place. Solution: Set H5DUMP with the current absolute path (used `pwd` instead of $PWD which is sometimes not set for whatever reason.) Also add a feature to allow H5DUMP to be set to a different value by hand. For example, if the h5dump just built is not working correctly, one can do "H5DUMP=/usr/local/bin/h5dump make check" to bypass the broken h5dump. Platforms tested: arabica
* [svn-r2623] Purpose:Albert Cheng2000-09-302-726/+730
| | | | | | | | | | Reformat the source Description: The tabstop seems to defined different from 8-stops. The source files looked very confusing. Just reformate the files. Not change to source code at all. Platforms tested: modi4 -64.
* [svn-r2619] MuQun Yang2000-09-291-1/+1
| | | | | | | | | | Purpose: update testh4toh5 Description: change h5dump path at testh4toh5 Solution: Platforms tested: arabica, baldric, eirene
* [svn-r2616] MuQun Yang2000-09-281-0/+0
| | | | | | | | | | | | | | | | Purpose: add h4toh5 converter source codes under tools directory. Description: this is the expected hdf5 result for h4toh5 converter. Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r2615] MuQun Yang2000-09-281-0/+0
| | | | | | | | | | | | | | | | Purpose: add h4toh5 converter source codes under tools directory. Description: this is the test file for h4toh5 converter. Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r2614] MuQun Yang2000-09-2811-0/+7575
| | | | | | | | | | | | | | | | Purpose: add h4toh5 converter source codes under tools directory. Description: [describe the bug, or describe the new feature, etc] Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r2613] MuQun Yang2000-09-281-5/+15
| | | | | | | | | | | | | | | | | Purpose: add h4toh5 converter tool Description: add flag h4toh5 and testh4toh5 in the Makefile. Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: test on eirene and arabica. [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
* [svn-r2579] Purpose:Quincey Koziol2000-09-192-13/+0
| | | | | | Clean up small compiler warnings and add missing function prototypes. Platforms tested: FreeBSD 4.1
* [svn-r2573] Purpose:Robb Matzke2000-09-191-47/+44
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fix Irix pmake bugs Description: Build fails on Irix when builddir != srcdir Solution: * acconfig.h * src/H5config.h.in [REGENERATED] Added definition for HAVE_STREAM * config/conclude.in * config/depend1.in * config/depend2.in * config/depend3.in * config/depend4.in The `Dependencies' file is located in the source tree. This fixes bugs for Irix pmake when compiling outside the source tree. Hopefully it still preserves Albert's changes which allow concurrent compilations to not stomp on each other's Dependencies files. * examples/Dependencies [REGENERATED] * src/Dependencies [REGENERATED] * test/Dependencies [REGENERATED] * tools/Dependencies [REGENERATED] Regenerated for testing purposes. Platforms: i686-pc-linux mips-sgi-irix6.5 sparc-sun-solaris2.6
* [svn-r2563] Purpose:Thomas Radke2000-09-151-0/+10
| | | | | | | | | | | | | | | | | Added the Stream Virtual File Driver to the list of drivers used for trying to open a file via h5dump_fopen(). Description: The Stream VFD was added at bottom of the driver list for h5dump_fopen(). If no driver succeeded to open a file given by its filename the Stream VFD would try to do so by parsing the filename as an 'hostname:port' argument, open a socket to that address and read read the file. This feature can be used to h5ls/h5dump streamed files. Platforms: All platforms (also between heterogenous).
* [svn-r2549] Added usage message if the user doesn't specify a filename (i.e., noBill Wendling2000-09-141-1/+6
| | | | command line arguments are given).
* [svn-r2467] Changed type so that compiler warnings about implicit conversion ↵Bill Wendling2000-08-041-11/+3
| | | | | | were removed.
* [svn-r2462] Fixed some small compiler warnings.Bill Wendling2000-08-042-846/+890
|
* [svn-r2461] Made some of the functions prototypes so that the compiler wouldn'tBill Wendling2000-08-041-4/+4
| | | | complain.
* [svn-r2460] Fixed some comparisons between signed and unsigned values. Made ↵Bill Wendling2000-08-042-3/+3
| | | | | | | some of the functions prototypes so that the compiler wouldn't complain about them.
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