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* [svn-r9234] Purpose:Quincey Koziol2004-09-094-4/+4
| | | | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Tweak recent "forward compatibility" changes to the H5E* API (which allowed for the old H5E API functions to remain unchanged) by allowing for the error stack callback function (H5E_auto_t) to also remain unchanged from the 1.6 branch. This required changing the H5E{get|set}_auto routines to have the old style H5E_auto_t type (which didn't have a stack ID parameter) and the new H5E{get|set}_auto_stack routines to have a newer "H5E_auto_stack_t" type (which has a stack ID parameter). This should make the H5E API changes as forwardly compatible as possible. One side-affect of this change was that it was impossible to determine if the current auto error callback was the old style (H5E_auto_t) or the new style (H5E_auto_stack_t) of callback, so a new API function (H5Eauto_is_stack) was adde to query this. Platforms tested: FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modi4) h5committest
* [svn-r9204] Purpose:Pedro Vicente Nunes2004-09-031-118/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bug fix changed some datset names for h5repack etsts Description: Description: the dataset region reference data was not portable between the Cray T3E and other machines Solution: this was due to the fact that the buffer to store the heap ID and index was using a sizeof(int) for its size 4 is used instead of sizeof(int) to permit portability between the Crays and other machines (the heap ID is always encoded as an int32 anyway) Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r9183] Purpose: New featureRaymond Lu2004-09-015-38/+10
| | | | | | | | | | | | Description: Restore 6 old error API functions back to the library to be backward compatible with v1.6. They are H5Epush, H5Eprint, H5Ewalk, H5Eclear, H5Eset_auto, H5Eget_auto. These functions do not have error stack as parameter. Solution: Internally, these functions use default error stack. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r9146] Purpose:Pedro Vicente Nunes2004-08-2412-38/+22
| | | | | | | | | | | | | | | | | | | h5repack test Description: modified a test file generation contents, for more easy debugging (generated just one reference dataset and one region reference ) Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r9137] Purpose:Pedro Vicente Nunes2004-08-235-30/+91
| | | | | | | | | | | | | | | | | | new test Description: added a test that generates and copies a file with a dataset with fill value (this is to test the property list function H5Pequal) Solution: Platforms tested: linux solaris aix Misc. update:
* [svn-r9121] Purpose:Pedro Vicente Nunes2004-08-194-360/+60
| | | | | | | | | | | | | | | | | | | | new feature Description: added a check that the chunk size must be smaller than pixels per block in SZIP request prints a message and exits, if not met Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r9113] Purpose:Xuan Bai2004-08-181-6/+6
| | | | | | | | | | | | | | | | | | Update. Description: Make some minor change so that h5jamgentest.c is compatible with Windows. Solution: Change open() and write() functions to HDopen(), and HDwrite(). Platforms tested: Windows 2000 Windows XP eirene (Note: I talked with Bob and Kent about these changes before check-in) Misc. update:
* [svn-r9112] Purpose:Xuan Bai2004-08-181-1/+4
| | | | | | | | | | | | | | | | | | | | | | | | | Update. Description: Make some minor change so that tellub.c is compatible with Windows. Solution: 1. unistd.h is not available in windows system. Add a macro for this header file as: #ifdef H5_HAVE_UNISTD_H #include <unistd.h> #endif 2. Change open, read, write, lseek functions to HDopen, HDread, HDwrite, and HDlseek, as these HD functions are more comtatible with Windows system. 3. add #include H5private.h 4. remove #include <stdlib.h> Platforms tested: Windows 2000 Windows XP eirene (Note: I talked with Bob and Kent about these changes before check-in) Misc. update:
* [svn-r9111] Purpose:Xuan Bai2004-08-182-13/+19
| | | | | | | | | | | | | | | | | | | | | | | | | Update. Description: Make some minor change so that h5jam.c is compatible with Windows. Solution: 1. unistd.h is not available in windows system. Add a macro for this header file as: #ifdef H5_HAVE_UNISTD_H #include <unistd.h> #endif 2. Change open, read, write, lseek functions to HDopen, HDread, HDwrite, and HDlseek, as these HD functions are more comtatible with Windows system. 3. add #include H5private.h 4. remove #include <stdlib.h> Platforms tested: Windows 2000 Windows XP eirene (Note: I talked with Bob and Kent about these changes before check-in) Misc. update:
* [svn-r9110] Purpose:Xuan Bai2004-08-181-12/+16
| | | | | | | | | | | | | | | | | | | | | | | | | | Update. Description: Make some minor change so that h5jam.c is compatible with Windows. Solution: 1. unistd.h is not available in windows system. Add a macro for this header file as: #ifdef H5_HAVE_UNISTD_H #include <unistd.h> #endif 2. Change open, read, write, lseek functions to HDopen, HDread, HDwrite, and HDlseek, as these HD functions are more comtatible with Windows system. 3. add #include H5private.h 4. remove #include <stdlib.h> Platforms tested: Windows 2000 Windows XP eirene (Note: I talked with Bob and Kent about these changes before check-in) Misc. update:
* [svn-r9106] Purpose:Pedro Vicente Nunes2004-08-175-21/+43
| | | | | | | | | | | | | | | | | bug fix Description: the option CHUNK:NONE (remove chunking ) was not setting the layout to contiguous Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r9036] Purpose:Quincey Koziol2004-08-063-3/+18
| | | | | | | | | | | | Bug fix Description: Correct compilation errors w/--enable-hdf5_v1_6 and using the C++ compiler as a C compiler Platforms tested: FreeBSD 4.10 (sleipnir) w/above flags Not tested with h5committest
* [svn-r9035] Purpose:Quincey Koziol2004-08-061-0/+83
| | | | | | | | | | | | Update dependencies Description: Update this with real values. Platforms tested: FreeBSD 4.10 (sleipnir) Too minor to require h5committest
* [svn-r9026] Purpose:Robert E. McGrath2004-08-051-0/+1
| | | | | | | | | | | | and one last test file. Description: Solution: Platforms tested: Misc. update:
* [svn-r9021] Purpose:Robert E. McGrath2004-08-055-0/+3
| | | | | | | | | | | | test files omitted from earlier checkin Description: Solution: Platforms tested: Misc. update:
* [svn-r9019] Purpose:Robert E. McGrath2004-08-059-1/+2464
| | | | | | | | | | | | | | | | Adding new 'jam' utility Description: New utility, plus changes to makefiles Solution: See http://hdf.ncsa.uiuc.edu/RFC/Jam Platforms tested: verbena (fortran,C++), arabica, hirdls (SGI Irix64) Misc. update: Manifest will be done in next checkin.
* [svn-r9014] Elena Pourmal2004-08-041-2/+4
| | | | | | | | | | | | | | | | Purpose: Small bug fix Description: When SZIP filter is present but encoding is not enabled test_misc21 and h5repack tests failed. Solution: Those tests should not run in this situation at all. Used conditonal compilation to disable the tests. Platforms tested: sol (today I will enable the daily tests with the szip library that doesn't have encoder for few other platforms) Misc. update:
* [svn-r8983] Purpose:Quincey Koziol2004-08-028-2184/+2093
| | | | | | | | | | | | Update dependencies Description: Update dependencies after config/depend1.in bugfix Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel IRIX64 6.5 (modi4) h5committested
* [svn-r8912] Purpose:Pedro Vicente Nunes2004-07-2118-116/+198
| | | | | | | | | | | | | | | | | | | | | | | | | | bug fixes Description: the return error code for a function was not initialized. in HP-UX it happened that this variable was initialized to -1 causing the function to return with an error condtion solution : initialized the variable to 0 the name of the dataset was printed after the differences in verbose mode and report when differences were found solution : check first if differences were found and then print the name of dataset and differences in verbose mode always print the name first Solution: Platforms tested: linux aix solaris Misc. update:
* [svn-r8909] Purpose:Pedro Vicente Nunes2004-07-201-1/+2
| | | | | | | | | | | | | | | | update documentation and usage message Description: updated the html documentation for the new h5diff modes added a section for h5repack Solution: Platforms tested: linux Misc. update:
* [svn-r8904] Purpose:Pedro Vicente Nunes2004-07-2097-1912/+1755
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | h5diff and h5repack changes Description: h5diff introduced the following four modes of output: Normal mode: print the number of differences found and where they occured Report mode: print the above plus the differences Verbose mode: print the above plus a list of objects and warnings Quiet mode: do not print output (h5diff always returns an exit code of 1 when differences are found) h5repack added an extra parameter for SZIP filter (coding method) the new syntax is -f SZIP=<pixels per block,coding> (pixels per block is a even number in 2-32 and coding method is 'EC' or 'NN') Example of use: ./h5repack -i file1 -o file2 -f SZIP=8,NN -v updated usage messages, test scripts and files accordingly Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8882] Purpose:Pedro Vicente Nunes2004-07-158-64/+161
| | | | | | | | | | | | | | | | | | | | | | | | bug fix, new feature Description: fixed bug in the parse function: cases where we have an already inserted name but there is a new name also example: -f dset1:GZIP=1 -l dset1,dset2:CHUNK=20x20 dset1 is already inserted, but dset2 must also be (it was not) added a CHECK_SZIP symbol to enable/disable checking of library related szip parameters added the print of the filter name in verbose mode (confirms visually that the filter was applied ) Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8869] Purpose:Pedro Vicente Nunes2004-07-1327-709/+1080
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | h5repack changes Description: there were some requests to change some minor h5repack features h5repack only made a warning about a non available filter in verbose mode ( -v ) without -v it kept silent, and users sometimes missed this warning the request was that it should print this warning always. so, the new format, is e.g ./h5repack -i test_szip.h5 -o out.h5 Warning: dataset </dset_szip> cannot be read, SZIP filter is not available due to this, and to avoid a lot of these messages in the shell test script, I modified the script h5repack.sh so that it detects the presence of all filters in the environment (previously it only detected SZIP) the test files were also divided in more files , to make the script code easier to follow Solution: Platforms tested: linux AIX (no szip) solaris (no szip, no gzip ) Misc. update:
* [svn-r8852] Purpose:Pedro Vicente Nunes2004-07-096-140/+433
| | | | | | | | | | | | | | | | h5dump new tests Description: added new tests for the print of array indices (nested objects, several ranks) Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8840] Purpose:Pedro Vicente Nunes2004-07-0821-889/+672
| | | | | | | | | | | | | | | | bug fix Description: when printing array indices , the calculation of the current column was not done correctly Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8826] Purpose:Pedro Vicente Nunes2004-07-0720-170/+273
| | | | | | | | | | | | | | | | | | h5dump new tests Description: added more tests for the escape/not escape feature for string data (with vlen, with compound, with char data) Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8813] Purpose:Pedro Vicente Nunes2004-07-062-5/+6
| | | | | | | | | | | | | | bug fix Description: one run from the tests had a wrong dataset name Solution: Platforms tested: linux (small ) Misc. update:
* [svn-r8812] Purpose:Pedro Vicente Nunes2004-07-0623-252/+2687
| | | | | | | | | | | | | | | | | | h5dump new tests Description: added new tests for the -p option, superblock, file contents, fill values, array indices. Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8792] Purpose:Pedro Vicente Nunes2004-07-023-28/+4
| | | | | | | | | | | | | | | | | | | change features Description: for the file contents dump and for hardlinks, one arrow "->" is printed, followed by the first found name for that object options for not printing specific types of objects were postponed Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8790] Purpose:Pedro Vicente Nunes2004-07-028-140/+179
| | | | | | | | | | | | | | | | | | | | | | | | | Description: the original code that showed a name for HARDLINK was reassigning that name to a name made in the dump traversal (made by concatenation by nested objects) Solution: removed this reassigmnet now the name showed after HARDLINK is always the first name found for that object (this object is printed once interely; subsequent printings show the word HARDLINK and the first name ) Platforms tested: linux AIX solaris Misc. update:
* [svn-r8782] Purpose:Quincey Koziol2004-07-012-4/+5
| | | | | | | | | | | Code cleanup Description: Clean up almost all warnings from Windows builds. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8781] James Laird2004-07-0113-229/+424
| | | | | | | | | | | | | | | | Purpose: HDF5 now supports SZIP with no encoder. Description: SZIP can be configured to have both encoder and decoder or just to have the decoder. HDF5 can now query the configuration of any filter, and will throw errors if users try to write using a filter with encoding disabled. Solution: Added H5Zget_filter_info function, changed API for H5Pget_filter and H5P_get_filter_by_id. See SZIP RFC. Platforms tested: Copper (fortran, C++, parallel), Sleipnir (C++), Arabica (fortran, C++), Verbena (fortran, C++) Misc. update:
* [svn-r8777] Purpose:Pedro Vicente Nunes2004-06-301-3/+4
| | | | | | | | | | | | | changed the name of one dataset, it was confusing Description: Solution: Platforms tested: linux (small) Misc. update:
* [svn-r8773] Purpose:Pedro Vicente Nunes2004-06-3047-1563/+1767
| | | | | | | | | | | | | | | | | bug fix Description: the indentation was not made properly for nested objects when printing array indices Solution: added the indentation to h5tools_simple_prefix function Platforms tested: linux AIX solaris Misc. update:
* [svn-r8760] Purpose:Quincey Koziol2004-06-292-2/+50
| | | | | | | | | | | | | Code cleanup & small bug fix Description: Regenerate dependency files Add htri_t as separate type from hbool_t for code tracing purposes. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel too minor to require h5committest
* [svn-r8758] Purpose:Pedro Vicente Nunes2004-06-2944-1391/+1430
| | | | | | | | | | | | | | | | | h5dump new feature, bug fix Description: added the dump of unmamed types to the file contents fixed a bug in the type array, it was printing invalid characters with the array indices option on Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8749] Purpose:Pedro Vicente Nunes2004-06-2866-1154/+1362
| | | | | | | | | | | | | | | | | | | | | | | | | | | | dumper new features Description: 1) added options for not printing : datasets, groups, datatypes, links 2) added a section for the user block 3) in the traversal routine, added the printing of an arrow for soft links and t he word HARDLINK for hardlinks the print of the file contents is made during traversal , instead of at the e nd of it (this is helpful for very large files, where the wait time can be very long) 4) changed the description of the fill value properties 5) added a colon after the printing of the array indices Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8735] Purpose:Pedro Vicente Nunes2004-06-241-28/+12
| | | | | | | | | | | | | | | cleaned SGI compiler warnings Description: Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8732] Purpose:Quincey Koziol2004-06-231-1/+1
| | | | | | | | | | | | Code cleanup Description: Reduce compiler warnings on SGI IRIX Platforms tested: FreeBSD 4.10 (sleipnir) SGI IRIX6 (Cheryl's machine) Too minor to require full h5committest
* [svn-r8718] Purpose:Pedro Vicente Nunes2004-06-222-4/+16
| | | | | | | | | | | | | | bug fix Description: the name of a dataset in one test had a typo Solution: Platforms tested: linux (small change ) Misc. update:
* [svn-r8715] Purpose:Pedro Vicente Nunes2004-06-2228-132/+432
| | | | | | | | | | | | | | | | | | | | | | h5dump output change, new tests Description: the storage layout output format the storage layout output format had some changes same for the user defined filter add an option (-y) for not printing the array indices (default is print indices ) the option for escaping non printable characters covers all characters (default is not escape) (this might be not very portable, the test files are tstring.ddl and tstringe.ddl ) add tests for the new options Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8714] *** empty log message ***Raymond Lu2004-06-2114-74/+67
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* [svn-r8709] Purpose:Robert E. McGrath2004-06-181-15/+47
| | | | | | | | | | | | | | | Bug fix for mozilla 145 Description: h5dump output truncated on SGI Solution: See message for 1.6 branch Platforms tested: verbena Misc. update:
* [svn-r8704] *** empty log message ***Raymond Lu2004-06-174-21/+19
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* [svn-r8703] Purpose: bug fixRaymond Lu2004-06-171-48/+42
| | | | | | | | | Description: After I added H5S_NULL dataspace to dumper test, the output violate XML schema for attribute data. Solution: changed. Platforms tested: RH8(fuss), minor change, only dumper is involved.
* [svn-r8688] Purpose:Pedro Vicente Nunes2004-06-154-5/+8
| | | | | | | | | | | | | | | | h5dump new feature Description: add processing of tab characters (in the context of the new option process CR/LF) Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8659] Purpose:Pedro Vicente Nunes2004-06-112-7/+2
| | | | | | | | | | | | | | | | | bug fix Description: a prototype for a new function used by h5tools_str.c was accidently left in that file the c++ treats this as an error Solution: removed the prototype, and pointed to the correct one (in h5tools_ref.h ) Platforms tested: Free BSD (c++) linux Misc. update:
* [svn-r8655] Purpose:Quincey Koziol2004-06-111-1/+1
| | | | | | | | | | | Code cleanup Description: Add more files that should be removed to the clean & distclean targets. Platforms tested: FreeBSD 4.10 (sleipnir) Too minor to require h5committest
* [svn-r8653] Purpose:Pedro Vicente Nunes2004-06-104-3/+22
| | | | | | | | | | | | | | | | bug fix Description: the file tfilters.h5 was missing the szip dataset, due to a absent szip configuration when it was generated Solution: generated it it again with szip on Platforms tested: linux (smalll change ) Misc. update:
* [svn-r8647] Purpose:Pedro Vicente Nunes2004-06-1013-681/+347
| | | | | | | | | | | | | | h5dump update Description: updated the h5dump test files generator , so that it coincides with the 1.6 branch Solution: Platforms tested: linux (small) Misc. update:
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