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* 1 10 Merges from develop (#424)Allen Byrne2021-03-0452-146/+404
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file
* 1 10 merges from develop (#419)Allen Byrne2021-03-033-5/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev
* 1 10 merge java copyright header changes (#392)Allen Byrne2021-03-012-6/+8
| | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder
* Hdf5 1 10 update license url part2 (#404)Larry Knox2021-03-01185-185/+185
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Modify temporary rpath for testing in java example scripts. (#230) * Fix undefined left shifting of negative numbers (#338) Undefined Bahavior Sanitizer errored here about left shifting negative numbers. * Update license url (#332) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - src and test directories. * Update license url part2 (#333) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - files not in src or test. * Update URL in source file Copyright headers for web. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Sean McBride <sean@rogue-research.com>
* 1 10 merge recent changes from develop (#345)Allen Byrne2021-02-171-1/+1
| | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop
* 1 10 merges from develop (#298)Allen Byrne2021-02-046-106/+108
| | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms
* Correct TARGET variable and CMake config file locationAllen Byrne2020-11-121-1/+1
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* OESS-98 add CMake option to build plugins project within hdf5Allen Byrne2020-10-1625-68/+74
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* h5repacktest VFD fix and formatting changesAllen Byrne2020-10-052-3/+1
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* HDFFV-11096 Correct h5dump usage textAllen Byrne2020-10-0510-23/+23
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* Source formattedAllen Byrne2020-10-01113-31995/+32148
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* Merge of clang-format changes from developAllen Byrne2020-09-3026-29/+398
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* The version string has a second use for packagingAllen Byrne2020-08-261-1/+1
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* Add back function for VERIFY_EXTERNAL_CONSOLIDATIONAllen Byrne2020-08-251-0/+20
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* Tweaks CMake to always run the tools lib testsDana Robinson2020-08-251-7/+1
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* Additional tools_utils cleanupDana Robinson2020-08-253-958/+583
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* Cleans up h5tools_test_utils.c and relatedDana Robinson2020-08-252-117/+77
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* Updates the tools VFD set test to passDana Robinson2020-08-241-35/+11
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* Corrects warnings in h5tools_test_utils.cDana Robinson2020-08-241-9/+4
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* Updates Autotools so h5tools_test_utils is actually builtDana Robinson2020-08-242-8/+7
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* Add ifdef blocks to S3/HDFS testAllen Byrne2020-08-231-0/+4
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* Updated HDF5 1.10 support branch version number to 1.10.8-0Larry Knox2020-08-191-7/+7
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* Merge pull request #2785 in HDFFV/hdf5 from ↵Dana Robinson2020-08-173-5/+2
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '88ecc17474e86e67f0ce64ed0b36c0d10e93eb66': Removes email and Modifications sections
| * Removes email and Modifications sectionsDana Robinson2020-08-173-5/+2
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* | Merge pull request #2782 in HDFFV/hdf5 from ↵Dana Robinson2020-08-164-8/+8
|\ \ | |/ | | | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '4312f5ea1a611cef01e9ecfb57d7c287c9549249': Adds unsuffixed double warning changes from develop Minor normalizations with develop
| * Minor normalizations with developDana Robinson2020-08-164-8/+8
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* | Merge pull request #2781 in HDFFV/hdf5 from ↵Dana Robinson2020-08-161-1/+1
|\ \ | |/ | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit 'cba993c3492d773e5d0923257382eca17e594910': Minor normalizations with develop
| * Minor normalizations with developDana Robinson2020-08-161-1/+1
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* | Merge pull request #2778 in HDFFV/hdf5 from ↵Dana Robinson2020-08-164-4/+3
|\ \ | |/ | | | | | | | | | | ~DEROBINS/hdf5_der:1_10_normalization to hdf5_1_10 * commit '0ba794be38b908271e6a2d8f5e231e4b097f25e5': Normalizations with develop
| * Normalizations with developDana Robinson2020-08-164-4/+3
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* | Tag TRILABS-227 and fix MANIFESTAllen Byrne2020-08-151-4/+5
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-08-1533-814/+1116
|\ \ | |/ | | | | | | | | | | | | | | | | | | | | | | * commit 'c638d93f3e660ce669a36e50a02473aac126953d': Fixes missing chunk_info entry in CMake files Even more normalization with develop More normalizations with develop Misc normalizations with develop Normalization of perform directory with develop Brings monotonic timer changes from develop Brings Mirror VFD to 1.10 from develop Brings splitter VFD from develop Brings file locking changes from develop
| * Misc normalizations with developDana Robinson2020-08-1523-533/+556
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| * Normalization of perform directory with developDana Robinson2020-08-159-14/+422
| | | | | | | | Brings over chunk_cache program
| * Brings monotonic timer changes from developDana Robinson2020-08-151-267/+138
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* | HDFFV-9984 Add merge/prune h5repack options for ext linksAllen Byrne2020-08-1536-148/+2071
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* Remove mingw from windows copyAllen Byrne2020-07-311-3/+4
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* Additional warnings removedAllen Byrne2020-07-302-2/+0
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* More warnings reductionAllen Byrne2020-07-305-7/+4
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* Warnings reduction in toolsAllen Byrne2020-07-308-126/+119
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* Correct reference fileAllen Byrne2020-07-291-2/+2
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* Correct h5diff test file namesAllen Byrne2020-07-298-25/+25
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* Add missing VFD open loopAllen Byrne2020-07-281-0/+29
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* Merge changes from devAllen Byrne2020-07-282-8/+0
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* Merge from dev of tools changesAllen Byrne2020-07-2281-5826/+5869
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* Merge pull request #2643 in HDFFV/hdf5 from ↵Vailin Choi2020-06-113-6/+23
| | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10961-h5clear-usage-statement-give to develop * commit '01b632c69ca1c97c2b0e1aaeeab1dd2362b580a6': Fix for HDFFV-10961: Couple changes to the tests' usage output files for h5clear. Fix for HDFFV-10961: add description to usage for --increment option.
* Removed trailing whitespace from source files.Dana Robinson2020-05-2613-66/+66
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* Misc fixes and changes from develop.Dana Robinson2020-05-167-8/+8
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* TRILAB-192 - merge changes from developAllen Byrne2020-04-073-6/+5
| | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2020-04-062-16/+50
|\ | | | | | | | | * commit '8668195f417cb22df596e3d440da7502adae1597': H5repack bug fixes from develop