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* [svn-r13600] Purpose:Albert Cheng2007-04-061-0/+7
| | | | | | | | | | | | | | bug fix. Description: If a non-existing or empty source file is used with -c option, the script ended up doing nothing and exit 0--a false success. Changed code so that it would do compile and end in error. Also added an acknowledgement that the script is adapted from mpicc of MPICH. Platform tested: Kagiso (serial and PP).
* [svn-r13587] Pedro Vicente Nunes2007-04-0411-26/+14
| | | | | | more code cleaning tested linux
* [svn-r13586] Pedro Vicente Nunes2007-04-0415-1530/+1520
| | | | | | | Code cleaning Move inclusion of .h files to .c Tested linux, aix, solaris
* [svn-r13581] Pedro Vicente Nunes2007-04-033-12/+9
| | | | | | | | Bug fix Substitute a malloc call for a calloc call while allocating a reference buffer Add a test for an empty reference case Tested linux
* [svn-r13579] Pedro Vicente Nunes2007-04-031-1/+1
| | | | | | Cast a malloc call to the correct type Tested linux
* [svn-r13572] Pedro Vicente Nunes2007-04-027-19/+98
| | | | | | | | | | | | Bug fixes Reset external file list slots name_offset to a state when created (0) in H5D_crt_copy so that it conforms to an assertion in H5D_update_entry_info that assumes the name_offset is 0 at this point this fixes the problem of h5repack and external files, add a new test and files for an external file h5diff, check for an error return in H5D_get_storage_size tested linux 32, 64
* [svn-r13571] Description:Quincey Koziol2007-03-302-2/+2
| | | | | | | | Correct various array indices to use 'size_t' instead of 'hsize_t' to make the PGI compiler happy. Tested on: Linux/32 2.4 (kagiso) w/PGI C compiler
* [svn-r13559] Pedro Vicente Nunes2007-03-281-0/+0
| | | | | | | | | | | | | bug fix a malloc call with an incorrect length caused several memory problems that ultimately corrupted a name passed in a list of arguments in the h52gif tool allocated memory was not freed created a folder for the gif test binary files and made the shell script use that file tested linux, AIX, solaris
* [svn-r13551] Pedro Vicente Nunes2007-03-271-0/+0
| | | | | | | | | | New feature Add a test shell script for h52gif tool. A simple script that just runs the tool from a pre-saved HDF5 file and produces a gif file. A HDF5 test generator program is also added Tested: linux, AIX, solaris
* [svn-r13540] TEST_OBJS=h5diffgentest.oMuQun Yang2007-03-231-1/+1
| | | | | | | | is supposed to be "TEST_OBJS=h5diffgentest.lo" .lo is used at other tools. Otherwise, it will cause compiling error at IRIX64 6.5. Tested at IRIX64 6.5, Linux 2.4, AIX 5.3 with parallel.
* [svn-r13525] Pedro Vicente Nunes2007-03-195-15/+15
| | | | | | | | | | | | | | | introduced a hack to allow 1.4 compability actually re-introduced, since this was there before, and was accidently removed on the 1.7 like changes of 1.6h5diff tested: linux 1.4 compat, solaris /* hack to alow v1.4 compability */ #ifdef H5_WANT_H5_V1_4_COMPAT typedef int H5G_obj_t1; #else typedef H5G_obj_t H5G_obj_t1; #endif
* [svn-r13511] Pedro Vicente Nunes2007-03-1321-227/+1355
| | | | | | | | | | | | 1.6 implementation of 1.7 h5dump bugs fixed # 701 h5dump hardlink pointing to the root group "/" # 466 h5dump: output data in binary format h5dump, added long names for parameters that did not have them on the command line parsing #344 h5dump does not show double long data #467 h5dump does not show group comment #405 h5dump does not print an attribute of a named datatype #570 h5ls/h5dump print of datatype.
* [svn-r13502] Pedro Vicente Nunes2007-03-1212-1541/+1541
| | | | Preparation for making 1.6 and 1.7 h5dump more similar and 1.6 to have 1.7 fixed bugs incorporated
* [svn-r13482] Pedro Vicente Nunes2007-03-091-5/+5
| | | | | | | | Bug fix Some data was declared as char and saved with H5T_NATIVE_CHAR type. But the data have negative values Solution : declared data as signed char and used H5T_NATIVE_SCHAR
* [svn-r13450] Pedro Vicente Nunes2007-03-056-53/+648
| | | | | | | | The file with the szip test was not generated during the last check in of 1.7 similar code. H5diff bug fix, attribute differences were not being summed to the total differences
* [svn-r13443] removed a mention to a removed header filePedro Vicente Nunes2007-03-021-1/+0
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* [svn-r13439] Pedro Vicente Nunes2007-03-0139-5326/+5625
| | | | | | | | | h5repack revision and 1.6 implementation of 1.7 bugs fixed in the last few months. #676. h5repack, h5diff: cannot handle big datasets #228 h5repack should not use H5Tget_native_type #584 H5repack ouput the percent of compression #674 : h5repack, adding error messages like h5dump does
* [svn-r13430] Bug fix: the macro used for percentage in the unsigned types ↵Pedro Vicente Nunes2007-02-282-170/+179
| | | | | | needed a cast to signed (the difference can be negative) One of the tests is not portable, so commented it. the unsigned long long conversion to float is not supported by some compilers and a message of not supported is printed . But in 64bit platforms the native type is a long, which produces a different output, the differences found. The file generated by the test is checked in for reference.
* [svn-r13416] Pedro Vicente Nunes2007-02-2766-76/+67
| | | | commented a test that fails cross platforms and renamed files
* [svn-r13409] Fixed bug in h5import under Visual Studio 2005 on Windows. ↵Scott Wegner2007-02-271-2/+2
| | | | | | | | VS2005 has problems with setvbuf, so conditionally defined HDsetvbuf in Windows file H5pubconf.h, and updated H5private.h and h5import.c accordingly. Tested: Windows XP, VS2005 kagiso
* [svn-r13403] Pedro Vicente Nunes2007-02-2666-75/+67
| | | | renamed files for more easy browsing
* [svn-r13402] Pedro Vicente Nunes2007-02-261-10/+0
| | | | clean comments
* [svn-r13399] Pedro Vicente Nunes2007-02-2616-40/+58
| | | | Revision of the percent tests to have all the same data
* [svn-r13395] Pedro Vicente Nunes2007-02-261-153/+285
| | | | Bug fix: Some output was being printed in quiet mode
* [svn-r13393] Pedro Vicente Nunes2007-02-262-57/+0
| | | | more code cleaning
* [svn-r13392] formatted the usage messagePedro Vicente Nunes2007-02-2619-38/+38
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* [svn-r13389] Pedro Vicente Nunes2007-02-2613-51/+113
| | | | make the 1.6 branch equal to 1.7 in terms of the messages printed
* [svn-r13382] Pedro Vicente Nunes2007-02-233-158/+32
| | | | Added a message of "non supported" in the case of unsigned long long to float attempt to convert by H5Tconvert (in the percentage case) , due to 1.6 branch lack of support
* [svn-r13376] comment one test until a fix is foundPedro Vicente Nunes2007-02-221-1/+1
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* [svn-r13370] Pedro Vicente Nunes2007-02-2144-811/+879
| | | | Added a little format alignment to the printing of dimensions
* [svn-r13363] remove some files that escaped yesterday's purgePedro Vicente Nunes2007-02-212-154/+0
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* [svn-r13356] Pedro Vicente Nunes2007-02-2091-6339/+9159
| | | | | | | | | background implementation of changes done for 1.7 regarding h5diff added support for comparing dataset regions added support for reading and comparing by hyperslabs for large files inclusion of a relative error compare formula to compare floating point numbers in order to deal with floating point uncertainty fixed a bug regarding relative error comparisons
* [svn-r13350] code cleaning ahead of one major revisionPedro Vicente Nunes2007-02-203-3055/+2996
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* [svn-r13345] replaced "CHUNKED-DIMENSION" for "CHUNKED-DIMENSION-SIZES" in ↵Pedro Vicente Nunes2007-02-201-4/+4
| | | | the usage
* [svn-r13337] Pedro Vicente Nunes2007-02-1936-228/+330
| | | | | New feature for h5diff, bug 161 print dataset dimensions along with dataset name
* [svn-r13318] Updated Copyright notices.Albert Cheng2007-02-1537-245/+282
| | | | Tested platform: Kagiso (serial, pp)
* [svn-r13316] Updated Copyright notices.Albert Cheng2007-02-1447-94/+141
| | | | Tested platform: Kagiso (serial, pp)
* [svn-r13298] Pedro Vicente Nunes2007-02-143-5/+5
| | | | temporary fix for a daily test failure
* [svn-r13284] Pedro Vicente Nunes2007-02-1216-336/+7088
| | | | | | | | | | | | | | | | fix for bug 551, done earlier only for 1.7 several programming errors contributed to this bug 1) the parsing of subsetting was using atoi to convert the parameter to an int, which caused problems for numbers greater that int. Substitute with atof 2) several index counters were declared as int, use hsize_t instead 3) the numerical format passed for printf was %lu, defined one compatible with hsize_t instead (unsigned long long) added 2 more tests for this
* [svn-r13275] Pedro Vicente Nunes2007-02-0955-68/+68
| | | | | | | | changed the XML schema path from NCSA to hdfgroup.org #define DEFAULT_XSD "http://hdfgroup.org/DTDs/HDF5-File.xsd" #define DEFAULT_DTD "http://hdfgroup.org/DTDs/HDF5-File.dtd"
* [svn-r12679] Pedro Vicente Nunes2006-09-252-110/+110
| | | | | | | | bug fix the number of atribute differences was not added to the total sum of differences
* [svn-r12677] bug fixPedro Vicente Nunes2006-09-255-39/+41
| | | | | the number of atribute differences was not added to the total sum of differences
* [svn-r12639] Frank Baker2006-09-041-0/+16
| | | | | | | | Description: Add per-directory abbreviated copyright notices (abbreviated COPYING files pointing to full notices). Tested: MANIFEST verified; not otherwise tested.
* [svn-r12635] Purpose:Albert Cheng2006-08-284-14/+7
| | | | | | | | | | | | Code cleanup. Description: Removed argc and argv from the function arguments of h5tools_get_fapl() and h5tools_fopen(). They were used to call MPI_Init() which was no longer needed. Tested: heping (serial and parallel).
* [svn-r12540] Added a new test for testing error handling of non-existing file.Albert Cheng2006-08-042-0/+8
| | | | nosuchfile.ls is the expected output.
* [svn-r12539] Purpose:Albert Cheng2006-08-041-27/+18
| | | | | | | | | | | | | | | | | | | | | | | Bug fixes. Description: There were MPI_init and MPI_finalize calls in the code of h5tools_fopen in parallel mode. But if a non-MPI tool is invoke to open a non-existing file, it tries to open the non-existing file with different VFD and eventaully came to try with the MPIO or the MPIPOSIX vfd, then it would try to do MPI_Init which would fail in the MPI environment if the a.out was not launched by MPI properly. Solution: MPI_Init and MPI_Finalize in general should be called by the MPI application, not called by a library subroutine as in the manner that was done here. Removed the MPI_init and MPI_Finalize calls. Used MPI_Initialized to verify if this has been launched as an MPI application in the proper manner before attempting to use the MPIO or the MPIPOSIX VFD to open the file. Tested: h5committested and also in tg-ncsa with parallel mode.
* [svn-r12457] Mark dumper output file as binary, missed during CVS conversionQuincey Koziol2006-07-071-2/+1
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* [svn-r12012] Purpose:James Laird2006-03-0611-3351/+0
| | | | | | | Deleted old gifconv directory Description: Ran cvs rm on old gifconv directory
* [svn-r12010] Purpose:James Laird2006-03-064-9/+56
| | | | | | | | | | | | | | | Moving gif2h5 to hl directory in 1.6 branch Description: This is the same change as was made in the 1.7 branch. Solution: Moved the gif2h5 tool from the hdf5/tools directory to the hdf5/hl/tools directory. The files were already present, but now the Makefiles build and install using the new directory instead of the old one. Platforms tested: mir, modi4
* [svn-r11890] Purpose:Quincey Koziol2006-01-241-1/+1
| | | | | | | | | | Fix typo Description: Fix typo in last commit, which was breaking 1.4 compatibility builds Platforms tested: FreeBSD 4.11 (sleipnir) w/1.4 compatbility