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* [svn-r11069] Purpose:Leon Arber2005-07-131-1/+2
| | | | | | | | | | | | | | | | Bug fix Description: The testh5diff.sh script fails on mcr because of random srun messages thrown into the output Solution: Added some code to filter out the srun messages before the output is compared. Platforms tested: LLNL mcr Misc. update:
* [svn-r11043] Purpose:Pedro Vicente Nunes2005-07-072-1/+2
| | | | | | | | | | | | | | new test hor h5repack, to syncronize tests between unix and windows it requires a new file added Description: Solution: Platforms tested: linux Misc. update:
* [svn-r11042] Purpose:Quincey Koziol2005-07-0710-70/+70
| | | | | | | | | | | | | | | | | | Bug fix Description: The ".chksh" file for a test script was being created in the "source" location rather than the build location. This can cause problems when multiple builds are running because "slower" machines will see the ".cshsh" file from faster machines and will not run the test script as they should. Solution: Use 'basename' command to strip off the path of the script and create the ".chksh" file in the build location. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11034] Purpose:Albert Cheng2005-07-0710-40/+20
| | | | | | | | | | | | | | | | | bug fix. Description: -nt is not a universal option for the test command in all platforms. The use of it in conclude.am cause some platforms to bark at the Makefile generated. Solution: Created a command script bin/newer which tests if file1 is newer than file2. Replace the "test file1 -nt file2" by "newer file1 file2". Platforms tested: Tested in sol.
* [svn-r11031] Purpose:Quincey Koziol2005-07-061-3/+24
| | | | | | | | | | | | | New feature Description: Initial checkin of B+ Tree code. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest Misc. update:
* [svn-r11017] Purpose:Pedro Vicente Nunes2005-07-051-1/+1
| | | | | | | | | | | | | | | bug fix Description: a string buffer did not had space for the trailing null Solution: add one more element to the buffer Platforms tested: linux Misc. update:
* [svn-r11013] Purpose:James Laird2005-07-0110-70/+70
| | | | | | | | | | | | | | | | | | Bug fix Description: Fixed bugs that caused tests to be unable to find testhdf5.sh during daily tests, and another that broke sol and shanti. Solution: When tests are run, their path is ./$testname . When scripts are run, their path has no leading "./". Fixed. Sol and shanti don't recognize the -e option for test, but they do know -f. Fixed. Also modified release notes. Platforms tested: mir, shanti, heping
* [svn-r11008] Purpose:James Laird2005-06-3015-893/+824
| | | | | | | | | | | | | | | | | | | | | | Feature: tests now use parallel make and only run once Description: When make is invoked in parallel (using the -j option), several tests will now be run simultaneously. This should speed up testing on a number of systems. When a test passes, it creates a foo.chkexe or foo.chksh file, which prevents the test from running again unless the test or library changes. Solution: Most of the changes live in config/conclude.am. Added *.chkexe and *.chksh files to the list of files to be cleaned at "make mostlyclean" time. Parallel tests still run one at a time, but use the same make instructions as serial tests. Platforms tested: mir, eirene, sleipnir, pommier, copper, modi4 (some errors occurred, probably due to the test being run before updating hdf5. Will re-run tests after checkin.)
* [svn-r11005] Purpose:Pedro Vicente Nunes2005-06-3038-174/+111
| | | | | | | | | | | | | | | | | | | bug fix Description: the numbers of differences was not printed for each object Solution: print it Platforms tested: linux solaris aix Misc. update:
* [svn-r11003] Purpose:Pedro Vicente Nunes2005-06-301-21/+38
| | | | | | | | | | | | | | | | | | | | bug fix Description: when diffing a string type string , a cycle is made using the hdf5 get_size function, which returns the type size some strings might have a NULL terminator character before the type size position this was noticed on a HDF-EOS file on the HDFEOSVersion attribute which was defined as a type with a 32 size, but contained a string with 12 characters, making h5diff to compare the extra garbage characters Solution: detect the NULL terminator character and end the diff at that position Platforms tested: linux Misc. update:
* [svn-r10996] Purpose:Leon Arber2005-06-286-87/+101
| | | | | | | | | | | | | | | | | | | | | | | Bug fix for parallel case for new "Some objects were not comparable" patch to h5diff. Description: The parallel h5diff wouldn't print out "Some objects were not comparable" because the worker tasks were not communicating the not_cmp flag of the diff_opt_t struct back to the manager, who ultimately prints everything. Also, some miscellaneous fixes for error printing. Some errors were printed out with printf instead of fprintf(stderr,...). In parallel environments, this can result in output getting lost. Solution: Had the worker tasks pass along the not_cmp flag to the manager when they sent along the number of differences they found. Platforms tested: heping (pp), sol (pp) Misc. update:
* [svn-r10995] Purpose:Pedro Vicente Nunes2005-06-281-1/+5
| | | | | | | | | | | | | | modified the script test so that when the test files do not exist , they are created Description: Solution: Platforms tested: linux solaris Misc. update:
* [svn-r10994] Purpose:Pedro Vicente Nunes2005-06-2843-730/+877
| | | | | | | | | | | | | | | | | | | | | bug fix Description: when 2 objects were not comparable, the final print information for the non verbose mode printed "0 differences found" Solution: replaced instead with a Summary message that says "Some objects were not comparable" Platforms tested: linux solaris Misc. update:
* [svn-r10971] Purpose: Bug fixRaymond Lu2005-06-223-29/+94
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: See details from Bug #213. Family member file size wasn't saved anywhere in file. When family file is opened, the first member size determine the member size. Solution: Hopefully, this is the last step of checkin for this stage. This step mainly enables h5repart tool to be able to convert file driver from family to sec2. Because the library saves family information in file, in trying to convert to sec2 driver, the library simply change the address of driver information to undefined so that the driver information block can be ignored. This step also updates the reference manual of H5Pset_fapl_family() and h5repart. In the fifth step of checkin, backward compatibility with v1.6 is tested. A family file created was created with the v1.6 library and opened with this version of the library. In the fourth step of checkin, a test suit is added for h5repart, including a program to generate the test files, a script file to run h5repart, and a program to verify repartitioned files can be opened by the library. There's a change from the first step of checkin. Family name template is no longer saved in the superblock because different pathname can make the name different. In the third step of checkin, h5repart has been modified. If h5repart is used to change the size of family member file, the new size(actual member size) is saved in the superblock. In the second step of checkin, multi driver is checked against the driver name saved in superblock. Wrong driver will result in a failure with an error message indicating multi driver should be used. This change includes split driver because it's a special case for multi driver. In the first step of checkin. Family member size and name template(unused at this stage) are saved in file superblock. When file is reopened,the size passed in thrin superblock. A different size will trigger a failure with an error message indicating the right size. Wrong driver to open family file will cause a failure, too. Platforms tested: h5committest and fuss. Misc. update: doc/html/RM_H5P.html and doc/html/Tools.html
* [svn-r10915] Purpose: work around a compiler bugPedro Vicente Nunes2005-06-132-2/+7
| | | | | | | | | | | | | | | | | | | | | | Description: while compiling in mir with pgcc -O2 a condition if (name ) { do_something(name); } is executed when name is NULL Solution: avoid the error by checking the NULL pointer inside do_something(name); Platforms tested: linux (mir with pgcc 6.0) Misc. update:
* [svn-r10884] Purpose: A minor featureRaymond Lu2005-06-091-7/+16
| | | | | | | | Description: Let this short script file check whether the tests pass and report pass or fail. Platforms tested: fuss only - a simple change to the script file.
* [svn-r10881] Purpose: Bug fixRaymond Lu2005-06-082-9/+14
| | | | | | | | | | | | | Description: After recent fix of family driver bug(#213), some failure was discovered on sol and kelgia in daily test. Family files can't be opened by hdf5/tools/misc/repart_test.c. It turned out to be the destination size of "off_t" type wasn't passed in through H5Pset() correctly. Solution: In tools/misc/h5repart.c, copy the destination size to a variable of "hsize_t" type and pass in to H5Pset(). Platforms tested: sol and kelgia where the failure was discovered.
* [svn-r10865] Purpose:Albert Cheng2005-06-071-3/+8
| | | | | | | | | | | | | | | | Improvement Description: The actual stderr output was modified by the FILTER and was not available for display if errors detected later. Solution: Copy the actual stderr to a temporary file and do filtering on that. Platforms tested: LANL Flash. Misc. update:
* [svn-r10858] Purpose:Albert Cheng2005-06-0410-40/+150
| | | | | | | | | | | bug fix. Description: The check-s and check-p targets are not recursively passes down. Make them so. Platforms tested: heping (serial and pp).
* [svn-r10850] Purpose:Albert Cheng2005-06-032-11/+6
| | | | | | | | | | | | | Improvement. Description: assign testph5diff.sh to the Parallel test scripts so that it will be tested for the check-p target. Platforms tested: heping pp. Misc. update:
* [svn-r10849] Purpose:Albert Cheng2005-06-0210-10/+30
| | | | | | | | | | | | | | | | | | bug fix Description: check-s and check-p were set as pre-requistics of test. They would get executed in parallel if parallel make is used. This could cause problems since serial tests are used to be executed before parallel tests. It is not known if it is always okay to run serial and parallel tests in simultantously. Solution: Change check-s and check-p as actions of the target test so that they get executed sequnentially. Platforms tested: heping PP.
* [svn-r10847] Purpose: Bug fixRaymond Lu2005-06-0224-30/+422
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: See details from Bug #213. Family member file size wasn't saved anywhere in file. When family file is opened, the first member size determine the member size. Solution: This is the fourth step of checkin. A test suit is added for h5repart, including a program to generate the test files, a script file to run h5repart, and a program to verify repartitioned files can be opened by the library. There's a change from the first step of checkin. Family name template is no longer saved in the superblock because different pathname can make the name different. In the third step of checkin, h5repart has been modified. If h5repart is used to change the size of family member file, the new size(actual member size) is saved in the superblock. In the second step of checkin, multi driver is checked against the driver name saved in superblock. Wrong driver will result in a failure with an error message indicating multi driver should be used. This change includes split driver because it's a special case for multi driver. In the first step of checkin. Family member size and name template(unused at this stage) are saved in file superblock. When file is reopened,the size passed in thrin superblock. A different size will trigger a failure with an error message indicating the right size. Wrong driver to open family file will cause a failure, too. Platforms tested: h5committest and fuss. Misc. update: MANIFEST
* [svn-r10840] Purpose:James Laird2005-06-0210-60/+360
| | | | | | | | | | | Added check-s and check-p targets. Description: Added check-s and check-p targets to 1.7 branch to match changes to 1.6 branch. Now parallel and serial tests can be run separately. Platforms tested: mir, modi4, copper
* [svn-r10829] Purpose:Albert Cheng2005-05-311-11/+35
| | | | | | | | | | | | | | | Bug fix Description: Various system or software (e.g. MPE) will print some diagnosis messages to stderr that cannot be suppressed. They messed up the output matching. Installed the STDERR_FILTER() to remove all these messages. Platforms tested: LANL flash. Misc. update:
* [svn-r10795] Purpose: Bug fixRaymond Lu2005-05-241-1/+31
| | | | | | | | | | | | | | | | | | | | | | | Description: See details from Bug #213. Family member file size wasn't saved anywhere in file. When family file is opened, the first member size determine the member size. Solution: This is the third step of checkin. h5repart has been modified. If h5repart is used to change the size of family member file, the new size(actual member size) is saved in the superblock. In the second step of checkin, multi driver is checked against the driver name saved in superblock. Wrong driver will result in a failure with an error message indicating multi driver should be used. This change includes split driver because it's a special case for multi driver. In the first step of checkin. Family member size and name template(unused at this stage) are saved in file superblock. When file is reopened,the size passed in thrin superblock. A different size will trigger a failure with an error message indicating the right size. Wrong driver to open family file will cause a failure, too. Platforms tested: h5committest and fuss Misc. update: RELEASE.txt
* [svn-r10785] Purpose:James Laird2005-05-231-1/+3
| | | | | | | | | | | | | | | | | Feature Description: Added "support" for UTF-8 character encoding. Solution: Wrote tests to check that UTF-8 can be used in a number of places in HDF5 (object names, data, etc.). These tests live in test/tunicode.c. Added a new UTF-8 character encoding for datatypes. Platforms tested: mir, modi4, heping Misc. update:
* [svn-r10739] Purpose:Pedro Vicente Nunes2005-05-094-0/+12033
| | | | | | | | | | | | | | new test Description: adds a new test for a case when there is more than 1 stripmine read Solution: Platforms tested: Linux Misc. update:
* [svn-r10738] Purpose:Pedro Vicente Nunes2005-05-092-22/+34
| | | | | | | | | | | | | | | | | | | bug fix 366 Description: the printing of the array indices was done relatively to the stripmine data (data read by hyperslabs when its memory requiremnts are too large) this was causing an incorrect numbering of the array indices (the next read would initialize the indices to zero) Solution: added a field to the print context that keeps track of the stripmine position and pass to the rendering function the total element position Platforms tested: Linux Misc. update:
* [svn-r10736] Purpose:Quincey Koziol2005-05-074-15/+6
| | | | | | | | | | | Code cleanup Description: Clean up some compiler warnings Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r10680] Purpose:MuQun Yang2005-04-271-1/+1
| | | | | | | | | | | | | | H5Pset_scaleoffset API is changed due to addition of the floating-point filter Description: Only add a parameter, nothing should change for the tool. Solution: Platforms tested: Linux 2.4 Misc. update:
* [svn-r10679] Purpose:MuQun Yang2005-04-271-1/+1
| | | | | | | | | | | | | | H5Pset_scaleoffset API is changed due to addition of the floating-point filter. Description: Only add a parameter, nothing should change for the tool. Solution: Platforms tested: Linux 2.4 Misc. update:
* [svn-r10678] Purpose:MuQun Yang2005-04-271-1/+1
| | | | | | | | | | | | | | | Update usage of H5Pset_scaleoffset. Description: H5Pset_scaleoffset API is changed due to addition of the floating-point filter. Solution: Only add a parameter, nothing should change for the tool. Platforms tested: Linux 2.4 Misc. update:
* [svn-r10659] Purpose:Leon Arber2005-04-252-3/+2
| | | | | | | | | | | | | | Optimization Description: removed an unncessary memset call. Solution: Platforms tested: heping (pp), sol (pp) Misc. update:
* [svn-r10648] Purpose:Quincey Koziol2005-04-221-1/+0
| | | | | | | | | | | | Bug fix Description: Remove declaration of 'prefix' variable that was moved into the h5tools library. Platforms tested: FreeBSD 4.11 (sleipnir) w/CC=g++ Too minor to require h5committest
* [svn-r10637] Purpose:Quincey Koziol2005-04-217-15/+96
| | | | | | | | | | | | Bug fix/code cleanup Description: Add tests to determine that very long (64K+) object names are working. Fixed a couple of bugs in h5dump where they weren't... Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10630] Purpose:Quincey Koziol2005-04-192-2/+2
| | | | | | | | | | | Cleanup Description: Add some new test files to the 'distclean' target. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10628] Purpose:Quincey Koziol2005-04-181-1/+3
| | | | | | | | | | | Code cleanup Description: Clean up various warnings reported by the Windows team. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10570] Purpose: MaintenanceElena Pourmal2005-04-0710-40/+0
| | | | | | | | | | | Description: Removed support for SRB driver Solution: Removed or modified appropriate files; ran reconfigure to regenerate Makefile.in and configure files. Platforms tested: heping and shanti Misc. update: ran bin/chkmanifest on heping
* [svn-r10534] Purpose:James Laird2005-04-0410-0/+10
| | | | | | | | | | | | | | | | | | | | Configuration feature Description: Different Fortran compilers mangle function names in different ways (upper case, lower case, adding underscores). To link between Fortran and C functions, we need to know what a given function's name is under a given compiler. Solution: Use autoconf's FC_WRAPPERS check to determine the Fortran naming scheme and define the FC_FUNC_ macro to name our functions (in H5f90proto.h). Removed references to our old FNAME macro, as well as flags that indicated whether function names were upper or lower case. Platforms tested: mir, pommier, modi4, copper, more
* [svn-r10517] Purpose:James Laird2005-03-3110-60/+150
| | | | | | | | | | | | | | | | Bug fix Description: On some machines, $RUNSERIAL variable needs to be used to run tests. Set $RUNTESTS (which is used for non-parallel tests) to be $RUNSERIAL in configure.am. Also, since I was updating all Makefiles.in anyway, I updated commence.am to point to autotools installs in AFS instead of those on heping. Platforms tested: mir, sleipnir, modi4, copper
* [svn-r10511] James Laird2005-03-3010-10/+60
| | | | | | | | | | | | | Purpose: "Bug fix" Description: Hardcoded Makefiles to use /bin/sh instead of letting configure detect shell automatically. This is what v1.6 does, and avoids problems on janus. Platforms tested: sleipnir, copper, modi4, mir
* [svn-r10506] Purpose:Quincey Koziol2005-03-291-0/+8
| | | | | | | | | | | | New feature Description: Add first iteration of "segmented heap" code, which will be used to store links in groups in a more flexible way than the previous "local heap" mechanism. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti)
* [svn-r10475] Purpose:James Laird2005-03-2910-0/+20
| | | | | | | | | | | | | | | | | Feature - conditional compilation Description: SRB file driver and tests are now compiled only when SRB is enabled (using --with-srb during configure). Solution: Added an automake conditional in configure.in, altered Makefiles.am in src and test directories to depend on that conditional. This should make a nice example for posterity to add conditionally compiled sources. Platforms tested: heping (only configure change)
* [svn-r10459] James Laird2005-03-2810-0/+10
| | | | | | | | | | | | | | | | | Purpose: Added C++ wrapper for Packet Table API. Description: Added macro for high-level C++ library (LIBH5CPP_HL), which changes every Makefile.in. Added directories for high-level C++ library (though currently only Packet Table API is supported). Added both C++ source and tests. Platforms tested: sleipnir, mir, modi4 Misc. update:
* [svn-r10250] Purpose:Albert Cheng2005-03-211-1/+1
| | | | | | | | | | Replaced tmpfile() call with system macro HDtmpfile so that it is easier to customize for systems. Platforms tested: in heping. Misc. update:
* [svn-r10220] Purpose: Minor bug fixElena Pourmal2005-03-152-2/+2
| | | | | | | | | | | Description: h5jam and h5unjam used old names jam and unjam while printing help message Solution: fixed Platforms tested: heping Misc. update:
* [svn-r10207] Purpose:Leon Arber2005-03-141-1/+1
| | | | | | | | | | | | | | | Bug fix Description: Typo in #ifdef to check for snprintf functionality. Solution: That should have been H5_VSNPRINTF_WORKS. Platforms tested: heping, modi4 Misc. update:
* [svn-r10206] Leon Arber2005-03-133-11/+11
| | | | | | | | | | | | | | | | | | | | | | | | | Purpose: Bug fix. Description: ph5diff fails on modi4 due to the way snprintf works on IRIX. Solution: The C99 standard says that, if there isn't enough room in the string, snprintf should return the number of characters that would have been written to the output string if there were enough room. The snprintf on modi4 would return the number of characters that is was able to write succesfully to the string if space ran out. The ph5diff logic that checks if the output buffer was full did not handle this sort of return value correctly. Used VSNPRINTF_WORKS from configure test to check how snprintf works and do the logic accordingly. Platforms tested: modi4 Misc. update:
* [svn-r10184] Purpose:Quincey Koziol2005-03-111-44/+24
| | | | | | | | | | | | | | | | | | | | New feature Description: Add new "block tracker" data structure to library, for tracking blocks of bytes in a file. Block trackers will be used to keep track of the blocks belonging to the soon-to-be-implemented "segmented heap" which is designed to replace the current local & global heaps (starting with the local heap). Block trackers will also keep track of the free space in the segmented heap and someday could be used to track the free space in the entire HDF5 file. They are implemented as a small header of information to cache the state of the blocks (max & min sizes of blocks tracked, etc.) and the records of the blocks themselves are stored in a v2 B-tree. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti) h5committest
* [svn-r10170] Purpose:Leon Arber2005-03-094-57/+161
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fixes Description: Fixes for several bugs, including dumping of excess output to a temporary file, fix for printing hsize_t datatype, and the long awaited fix for intermixed output. Solution: Fix 1: Overflow file Previously, any output that a worker task made was buffered locally in memory, up to a point. Any output beyond the size of the buffer (used to be 10k) was discarded. Now, the memory buffer size has been changed to 1k and any output beyond this amount is sent a temporary file. This way, no output is lost and memory usage is kept under control. The temporary file is deleted as soon as a worker task finishes sending its contents to the manager. Fix 2: hsize_t printing Printing of the hsize_t datatype used to be handled by %Hu passed to HDfprintf. However, there is no corresponding HDvsnprintf that is able to print hsize_t types. These are now printed with the aid of H5_PRINTF_LL_WIDTH. Fix 3: Intermixed output fix Intermixed output would occur on some machines (although I haven't seen it happen for a while) due to the unpredictability of the underlying network and the speed at which various message would travel. This has been fixed by having all output send to the manager for printing. The worker tasks no longer print the output themselves upon receipt of a token, but instead send that data to the manager. Platforms tested: heping, eirene, tg-login (the only place that seems to still experience intermixed output every now and then) Misc. update:
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