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* Merge pull request #2530 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-217-218/+215
|\ | | | | | | | | | | | | to develop * commit 'c6097935d5be4c3750b9bf9167783ad28158905b': Separated VFD and VOL parameters in tools.
| * Separated VFD and VOL parameters in tools.Dana Robinson2020-04-217-218/+215
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* | Trim trailing whitespaceQuincey Koziol2020-04-2016-119/+119
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* Fixed problems with S3 and HDFS VFDs.Dana Robinson2020-04-174-7/+7
| | | | | | * Updated info struct parameter to correct info_string * Fixed Makefile.am where the S3 VFD was listed twice, causing duplicated symbols errors.
* Update h5repack long arguments for id-->value changes.Dana Robinson2020-04-141-2/+2
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* Changed identifiers and command-line options from "id" to "value" in toolsDana Robinson2020-04-144-27/+27
| | | | code to be in agreement with H5VL API terminology.
* Added support for passing connector info strings via the commandDana Robinson2020-04-096-33/+48
| | | | line to the tools internals.
* Fix for passthrough VOL not passing tools tests due to incorrectDana Robinson2020-04-083-24/+6
| | | | optional callback queries.
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-072-10/+10
|\ | | | | | | | | | | | | * commit 'f6514c35ea3786206a8db73e1cad8fce8fe6a715': Updated test ddl files so CMake passes after h5dump failures. Modifications based on PR review feedback. Add two routines gen_ref_files() and gen_sel_files() to generate test files related to references and selections. These test files will be copied to 1.12, 1.10 and 1.8 for compatibility testing.
| * Updated test ddl files so CMake passes after h5dump failures.Dana Robinson2020-04-062-10/+10
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-067-80/+136
|\ \ | |/ | | | | | | | | | | * commit '4830a1796441abbb5a4fbd2cff9a651f2a0d066e': Updated tools dump output when dataset offset is undefined. Added checks for native optional call support in some of the tools. Misc changes for h5dump VOL changes.
| * Merge branch 'develop' into tools_vol_updateDana Robinson2020-04-064-20/+20
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| * | Updated tools dump output when dataset offset is undefined.Dana Robinson2020-04-022-2/+2
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| * | Added checks for native optional call support in some of the tools.Dana Robinson2020-04-023-48/+94
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| * | Merge branch 'develop' into tools_vol_updateDana Robinson2020-04-027-105/+107
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| * \ \ Merge branch 'develop' into tools_vol_updateDana Robinson2020-03-311-0/+2
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| * \ \ \ Merge branch 'tools_vol_update' of ↵Dana Robinson2020-03-303-46/+53
| |\ \ \ \ | | | | | | | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into tools_vol_update
| * | | | | Misc changes for h5dump VOL changes.Dana Robinson2020-03-306-43/+53
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* | | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-04-052-2/+2
|\ \ \ \ \ \ | | |_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | * commit '5d1590079ea0061a7b86d7210cb796b6d58a17c7': Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector
| * | | | | Merge pull request #2490 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-04-032-2/+2
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a5a2fb44296327787476407a249d9470b3c80427': Skip testing of passthrough VOL connector in a Family File tools test Restore previous tools library driver name behavior with passthrough VOL connector
| | * | | | | Skip testing of passthrough VOL connector in a Family File tools testJordan Henderson2020-04-031-1/+1
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| | * | | | | Restore previous tools library driver name behavior with passthrough VOL ↵Jordan Henderson2020-04-031-1/+1
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* | | | | | TRILAB-192 add c++ and fortran warnings build systems one fileAllen Byrne2020-04-053-6/+5
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* | | | | | Add missing header includeAllen Byrne2020-04-031-0/+1
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* | | | | Fixed unnecessary H5R casts in the tools that were raising warnings.Dana Robinson2020-04-023-18/+18
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* | | | Minor renaming in the tools code.Dana Robinson2020-03-317-105/+107
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* | | Merge pull request #2479 in HDFFV/hdf5 from ~GHEBER/hdf5:bugfix/HDFFV-11065 ↵Gerd Heber2020-03-301-0/+2
|\ \ \ | |/ / |/| | | | | | | | | | | | | | to develop * commit '2dfc047bc4aca7c13bccf44da97bff026cbbf5a6': Fix for HDFFV-11065.
| * | Fix for HDFFV-11065.Gerd Heber2020-03-291-0/+2
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* | Fix latent bug in h5repack options file readingJordan Henderson2020-03-293-46/+53
|/ | | | Add 'enable-error-stack' option to h5format_convert
* Minor renaming in h5dump (addr --> token)Dana Robinson2020-03-282-30/+30
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* Merge pull request #2473 in HDFFV/hdf5 from tools_vol_update to developAllen Byrne2020-03-271-2/+3
|\ | | | | | | | | * commit 'feb0f521b16b79485c22c86a630a1d91cb680a61': Fix some missing symbols issues in tools library
| * Fix some missing symbols issues in tools libraryJordan Henderson2020-03-271-2/+3
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* | Merge pull request #2469 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-03-2723-777/+1167
|\ \ | |/ | | | | | | | | | | * commit 'ea952b25ba0fd5c4b5f60a94e75a1b5b78e66172': A few small tweaks to the tools from review Replace usage of some standard library functions with HD- versions Update Tools library to be better compatible with VOL connectors
| * A few small tweaks to the tools from reviewJordan Henderson2020-03-274-131/+139
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| * Replace usage of some standard library functions with HD- versionsJordan Henderson2020-03-262-4/+4
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| * Update Tools library to be better compatible with VOL connectorsJordan Henderson2020-03-1723-759/+1141
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Modify h5repack to integrate with VOL connectors Update tools library to accomodate VOL connectors Update logic in h5tools_fopen for VOL connectors Add command-line options to h5repack for specifying in/out VOL connectors Implement h5tools_set_vol_fapl Fix library shutdown issue Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme Avoid H5Ocopy in h5repack when using different VOL connectors Update h5tools_test_utils.c for ROS3 and HDFS integration
* | Add extensive warnings to tools executablesAllen Byrne2020-03-258-0/+22
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* | unused set-variable in macroAllen Byrne2020-03-251-0/+1
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* | Fix Werror issues in JNI and toolsAllen Byrne2020-03-241-1/+0
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* | TRILAB-192 restrict extensive warnings to librariesAllen Byrne2020-03-241-0/+6
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* WhitespaceAllen Byrne2020-02-291-14/+14
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* Fix standalone linkAllen Byrne2020-02-254-7/+8
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* HDFFV-11036 add file compare test processAllen Byrne2020-02-241-8/+52
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* TRILAB-142 Change minimum CMake version to 3.12Allen Byrne2020-02-2128-57/+51
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* H5_HAVE_PARALLEL, _DEBUG_API, etc. Add attributes to some variables andDavid Young2020-02-101-1/+1
| | | | parameters that are unused under some configurations.
* HDFFV-11014, fix the h5repack issue that misses a few attributes during the ↵Muqun Yang2020-02-071-1/+8
| | | | repacking. The flag that checks the object reference attribute is not updated properly. The fix is trivial. Just need to move the flag update line into the inner loop. Tested at Jelly. Also update the release.txt.
* Small fixes for tools and skip autotools tests for no filterAllen Byrne2020-01-293-9/+4
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* Merge pull request #2318 in HDFFV/hdf5 from ↵David Young2020-01-292-92/+93
|\ | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-1 to develop * commit 'fa1b2f6ef35c459c9f74ead885c119ae7f61c056': Reduce differences between my -Werror branch and `develop`:
| * Reduce differences between my -Werror branch and `develop`:David Young2020-01-292-92/+93
| | | | | | | | | | | | | | | | Rename index -> idx, fileno -> fnumber, fileno -> fno to avoid GCC shadowed declaration warnings about index(3). Convert #pragma GCC diagnostic push/pop/ignored to the HDF5 library's H5_GCC_DIAG_OFF()/H5_GCC_DIAG_ON() macros.
* | Merge pull request #2320 in HDFFV/hdf5 from ↵David Young2020-01-291-1/+1
|\ \ | | | | | | | | | | | | | | | | | | ~DYOUNG/werror:reduce-werror-diffs-2 to develop * commit 'a5f236e83bdd29e660a55c5577a69a3809605cda': Reduce casts of HDcalloc()/HDmalloc() that -Wc++-compat required.
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