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* [svn-r8647] Purpose:Pedro Vicente Nunes2004-06-1013-681/+347
| | | | | | | | | | | | | | h5dump update Description: updated the h5dump test files generator , so that it coincides with the 1.6 branch Solution: Platforms tested: linux (small) Misc. update:
* [svn-r8644] Purpose: h5dump new featuresPedro Vicente Nunes2004-06-1024-43/+1091
| | | | | | | | | | | | | | | | | | | | | | | Description: added the code for print strings with new line and display the path of references (new source files h5tools_ref.c and .h ) added a test suite in testh5dump.sh.in for ( note : to create testh5dump.sh , one must redo ./configure; this detects the availability of filters and generates testh5dump.sh accordingly) 1) storage layout 2) fill value 3) print reference with path 4) print strings with new lines 5) filters Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8635] Purpose:Quincey Koziol2004-06-091-1/+1
| | | | | | | | | | | Bug fix Description: Correct path to new testh5dump.sh, now that it's generated. Platforms tested: FreeBSD 4.10 (sleipnir) w & w/o srcdir Too minor to require h5committest
* [svn-r8627] Purpose:Quincey Koziol2004-06-091-0/+9
| | | | | | | | | | | | Update shell scripts Description: Switch to generating the testh5dump.sh script at configure time, so we can determine which filters are available to test. Platforms tested: FreeBSD 4.9 (sleipnir) too small to require h5committest
* [svn-r8622] Purpose:Pedro Vicente Nunes2004-06-0751-1649/+2973
| | | | | | | | | | | | | | | | | | | | | | | | | h5dump new version Description: added the changes already made for 1.6 support for dumping of 1) filters 2) storage layout 3) fill value 4) comments 5) superblock 6) file contents 7) array indices Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8618] Purpose:Quincey Koziol2004-06-051-13/+19
| | | | Fix makefiles, dependencies & manifest after source file rename.
* [svn-r8614] Purpose:Quincey Koziol2004-06-051-1/+2
| | | | | | | | | | | | | | | Refactor code Description: Move chunk and contiguous cached raw data from file information to dataset information. This simplifies a number of internal interfaces, aligns the code with it's purpose better and should allow more optimizations to the chunked data I/O performance. Platforms tested: Solaris 2.7 (arabica) FreeBSD 4.10 (sleipnir) h5committest
* [svn-r8596] Purpose:MuQun Yang2004-05-281-5/+0
| | | | | | | | | | | | | | | bug fix Description: Currently h5dump test on windows won't separate error form standard output; which shows at function error_message. A #ifdef WIN32 macro at this file make stderr to be the same as stdout on windows. Solution: Separate standard error from standard output. Platforms tested: windows xp VS 6.0(by xuan bai), no needs to test on other platforms Misc. update:
* [svn-r8582] *** empty log message ***Raymond Lu2004-05-268-4/+805
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* [svn-r8581] Purpose: new testRaymond Lu2004-05-261-1/+1
| | | | | | | Description: Add test of null dataspace for dataset and attribute in h5repack. Platforms tested: RH8(fuss). Simple change, only h5repack is involved.
* [svn-r8579] *** empty log message ***Raymond Lu2004-05-266-98/+164
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* [svn-r8578] Purpose: new testRaymond Lu2004-05-263-12/+71
| | | | | | | Description: Add null dataspace test for dataset and attribute to h5diff Platforms tested: RH 8(fuss). Simple change, only h5diff is involved.
* [svn-r8563] *** empty log message ***Raymond Lu2004-05-2116-114/+191
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* [svn-r8562] Purpose: New featureRaymond Lu2004-05-213-67/+124
| | | | | | | Description: Add null dataspace to h5dump and h5ls. Platforms tested: h5committest
* [svn-r8495] Purpose:Quincey Koziol2004-05-088-2018/+2130
| | | | | | | | | | | | | | Bug fixes Description: Updated dependencies Fixed error with C++ compiler builds of main library Added H5Pset_data_transform to MPE info Platforms tested: FreeBSD 4.9 (sleipnir)
* [svn-r8383] Purpose:Quincey Koziol2004-04-1823-211/+147
| | | | | | | | | | | | | Code cleanup Description: Clean up lots of warnings based on those reported from the SGI compilers as well as gcc. Platforms tested: SGI O3900, IRIX64 6.5 (Cheryl's SGI machine) FreeBSD 4.9 (sleipnir) w/ & w/o parallel h5committest
* [svn-r8378] Purpose:Quincey Koziol2004-04-173-0/+0
| | | | | | | | | | | | Code cleanup Description: Regenerated with older version of dataspace information, since these files don't contain null dataspaces. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r8352] Purpose:Pedro Vicente Nunes2004-04-142-7/+22
| | | | | | | | | | | | | | | | bug fix Description: the routine for reading the options from a file had the "old" parse syntax Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8345] Purpose:Albert Cheng2004-04-131-133/+76
| | | | | | | | | | | | | | | | | | | Bug fix. Description: Temporary output files were created in the source directory. If multiple build/tests using the same source directory occur at the same time, they would conflict because of the same file names. Solution: Changed it to create temporary output file in the current build directory. Platforms tested: sol. Misc. update:
* [svn-r8333] Purpose:Pedro Vicente Nunes2004-04-093-1/+133
| | | | | | | | | | | | | | | new test Description: add a test that generates a file with "holes" and then uses h5repack to clean the empty space. it works Solution: Platforms tested: linux Misc. update:
* [svn-r8332] Purpose: Last step of check-in for Null dataspaceRaymond Lu2004-04-083-0/+0
| | | | | | | | | | | | | Description: Mainly are header message changes for dataspace. In last round of check-in, a new header message for dataspace to created, which is not a good way. Now, there will be no new message for dataspace, but just add the type of dataspace in the message while increment its version number. Backward compatibility is addressed. The attribute design is modified accordingly. Took out Null dataspace test from tmisc.c and put it in th5s.c. These files are re-generated since the header message has been changed. Platforms tested: h5committest
* [svn-r8323] Purpose:Pedro Vicente Nunes2004-04-083-120/+212
| | | | | | | | | | | | | | | | bug fix, new tests Description: added a couple of #ifdefs to check if a specific filter is available for read added more tests the h5tools check filters had a mismatched filter variable Solution: Platforms tested: linux, with several filter configurations (all, some , none ) Misc. update:
* [svn-r8320] Purpose:Pedro Vicente Nunes2004-04-087-12/+170
| | | | | | | | | | | | | | | | new tests for h5repack Description: added more tests both to the test program and shell script that test a variation of different filter converssions Solution: Platforms tested: linux Misc. update:
* [svn-r8318] Purpose:Pedro Vicente Nunes2004-04-0710-538/+546
| | | | | | | | | | | | | | | | | | | | new tests for h5repack Description: added tests that do layout type to layout type conversion in a matrix of 9 between compact, contiguous and chunking Solution: Platforms tested: linux afs has problems; I could not telnet to sol and copper, arabica is really slow (meaning waiting 1 minute for a typed character) and the writing of a file gave an error arabica 181% afs: failed to store file (145) afs: failed to store file (145) Misc. update:
* [svn-r8311] Purpose:Pedro Vicente Nunes2004-04-063-5/+4
| | | | | | | | | | | | | cleaned some comments and printfs Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8297] Purpose:Pedro Vicente Nunes2004-04-027-50/+43
| | | | | | | | | | | | | | | | | | | | | | bug fix Description: the synntax of the input of h5repack conatined double quotes and spaces, which were causing problems on the parsing in AIX paralell Solution: replaced the spaces by = that is, instead of -f "GZIP 6" we have now -f GZIP=6 Platforms tested: linux solaris AIX paralell Misc. update:
* [svn-r8295] Purpose:Albert Cheng2004-04-021-5/+9
| | | | | | | | | | | | Bug fix. Description: nerror was not updated when errors were detected. Added the nerror update and print a message at the end if all is well. Platforms tested: Tested in copper, both parallel and serial.
* [svn-r8286] Purpose:Pedro Vicente Nunes2004-03-294-11/+82
| | | | | | | | | | | | | | | | | | | bug fix continuation Description: the atof return value on a hexadecimal input is different on some systems; before checking for the atof return value do a character check for the first 2 characters of the string input Solution: Platforms tested: linux solaris Misc. update:
* [svn-r8283] Purpose:Pedro Vicente Nunes2004-03-261-2/+2
| | | | | | | | | | | | | | | | | | | | bug fix (sort of) Description: apparently linux and other systems (solaris) return a different value from atof if the argument is in hexadecimal . this return value was used to test if the argument to -p and -d was a valid floating point number for now , commented the calls in the script with -p <hexa> until we find a portable solution Solution: Platforms tested: linux solaris windows Misc. update:
* [svn-r8282] Purpose:Pedro Vicente Nunes2004-03-256-99/+27
| | | | | | | | | | | | | | | bug fix Description: the -p option was not parsing correctly if the input was in the exponential format Solution: add a new parse test for floating point numbers Platforms tested: linux Misc. update:
* [svn-r8281] Purpose:Pedro Vicente Nunes2004-03-253-8/+5
| | | | | | | | | | | | | | | code clean, change test script Description: removed soem debugging messages changed the chunking command line call to a non square dimensionality Solution: Platforms tested: linux Misc. update:
* [svn-r8252] Purpose:Pedro Vicente Nunes2004-03-111-0/+15
| | | | | | | | | | | | | | | | | | | | | | | bug fix new test Description: the fletcher filter used a temporary 2 byte word buffer to compute the checksum. this is non portable between big-endian/little endian. added a test that reads 2 pre-saved files (one LE, other BE) with that filter enabled Solution: replaced with a buffer of 1 byte type Platforms tested: linux solaris solaris 64 bit AIX windows Misc. update:
* [svn-r8232] Purpose:Pedro Vicente Nunes2004-03-043-30/+23
| | | | | | | | | | | | | | | | new feature Description: added a check for the return value of the tools h5repack and h5diff in the run script. the return value is used to print PASSED (tool returns 0) or FAILED Solution: Platforms tested: linux Misc. update:
* [svn-r8229] Purpose:Pedro Vicente Nunes2004-03-0217-48/+338
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | 1) new function for tools library 2) new test script for h5repack Description: 1) currently all the tools (h5dump, h5diff, etc) do not check if a filter is available for reading some dataset that might have a filter not available on the current configuration (the behaviour of the tools until now was to trigger a library error, saying that the dataset cannot be read due to the lack of the filter) Solution: 1) added a new function h5tools_canreadf that checks if a dataset can be read depending on the availability of filters. this function was added in calls for h5diff and h5repack. instead of triggering the library error, a message is printed, saying that the dataset cannot be read (the print is optional, it is on on verbose mode) 2) added a shell script that tests the commannd line tool behaviour of h5repack the script does a series of runs of h5repack with several options on the same file (this file test4.h5 was added to the testfiles dir). then, it runs the h5diff tool, with the input and output files , in each run. the goal of the test is also to check item 1) . the binary file was saved with filters that might not be available on other configurations Platforms tested: linux (all filters enabled) linux (some filters disabled) solaris (some filters disabled) AIX (some filters disabled) windows (all filters on and off ) Misc. update:
* [svn-r8227] Purpose:Pedro Vicente Nunes2004-03-0117-17/+0
| | | | | | | | | | | | these output files have the output without a removed printed new line Description: Solution: Platforms tested: Misc. update:
* [svn-r8226] Purpose:Pedro Vicente Nunes2004-03-011-1/+1
| | | | | | | | | | | | | removed a print of a new line Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8224] Purpose:Pedro Vicente Nunes2004-02-261-6/+0
| | | | | | | | | | | | | | | | | bug fix Description: I introduced some #ifdef <have_filter> on the check in yesterday on the places that generated datasets, that had no corresponding on the read part. this caused failures in the configurations where a filter was not defined Solution: just removed the #ifdefs Platforms tested: linux Misc. update:
* [svn-r8223] Purpose:Pedro Vicente Nunes2004-02-251-10/+25
| | | | | | | | | | | | | | | | | | | | | | bug fix Description: generating a dataset in linux 2.4 (verbena) with the pgcc compiler gave an error with the following sequence 1) make a space id1 and a dcpl 2) make a space id2, create and write a dataset with space id2, close 3) attempt to create a dataset with space id1 fails and calling a set_filter function with the dcpl in 1) fails Solution: just changed the order 2) to 1) Platforms tested: linux 2.4 (verbena) with pgcc compiler Misc. update:
* [svn-r8218] Purpose:Pedro Vicente Nunes2004-02-235-176/+165
| | | | | | | | | | | | | | | | | | | | | | | | bug fix in H5Zshuffle.c add more tests to h5repack that exposed the bug Description: when creating a dataset with the shuffle filter and duplicating it in a new dataset (file) the call to H5Z_set_local_shuffle failed. this is because the value of cd_nelmts of the filter structure is set to 1 (H5Z_SHUFFLE_TOTAL_NPARMS) when the original dataset is created, but when the new dataset is created there is a checking instruction that fails if the value of cd_nelmts is not 0 (its original value, H5Z_SHUFFLE_USER_NPARMS) Solution: just remove that check condition, since the value of cd_nelmts is not used anyway. if we decide that the value of cd_nelmts is necessary, then the H5O_pline_copy function must be changed to update this value (a different update for each filter) Platforms tested: linux solaris AIX Misc. update:
* [svn-r8198] Purpose:Pedro Vicente Nunes2004-02-121-0/+1
| | | | | | | | | | | | | | | small bug fix Description: a dataset creation property list was not closed Solution: closed it, calling H5Pclose(dcpl); Platforms tested: linux (small fix) Misc. update:
* [svn-r8176] Purpose:Pedro Vicente Nunes2004-02-104-99/+150
| | | | | | | | | | | | | | | | | | | new feature, bug fix, changed function Description: 1) implemented the option that says if the dataset is too small , do not compress it 2) bug fix in the SZIP checking . only apply szip to atomic datatypes 3) made the apply_filters function more compact Solution: Platforms tested: linux AIX solaris Misc. update:
* [svn-r8163] Purpose:Quincey Koziol2004-02-071-0/+12
| | | | | | | | | | | | | Bug fix Description: Add ifdef around most of this file, to protect it from the Intel 7.1 C compiler which seems to have bugs in its -MG flag for creating dependency information. Platforms tested: Linux IA64 (titan) too obscure to require testing on other platforms
* [svn-r8151] Purpose:Quincey Koziol2004-02-044-185/+176
| | | | | | | | | | | | Bug fix Description: Fix h5tools routines to not try to call MPI_Init() unless an MPI-based VFD is actually used. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel Linux 2.4 (verbena) w/parallel
* [svn-r8150] Purpose:Pedro Vicente Nunes2004-02-041-1/+1
| | | | | | | | | | | | | introduced the constant H5Z_FILTER_ALL, used to remove all filters in H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8149] Pedro Vicente Nunes2004-02-041-2/+2
| | | | | | | | | | | | | | Purpose: replaced name of delete filter with remove filter for the new function H5Premove_filter Description: Solution: Platforms tested: linux Misc. update:
* [svn-r8143] Purpose:Quincey Koziol2004-02-027-185/+289
| | | | | | | | | | | | | | New Feature. (Contributed by Robb) Description: Allow h5ls to specify a VFL with the '--vfl=' command line flag. Add MPI-I/O & MPI-POSIX VFL drivers to list of drivers available for h5ls and h5dump. Platforms tested: FreeBSD 4.9 (sleipnir) w/parallel h5committested
* [svn-r8128] Purpose:Quincey Koziol2004-01-318-152/+349
| | | | Update dependencies after restructuring of MPI stuff
* [svn-r8123] Purpose:Pedro Vicente Nunes2004-01-293-1/+38
| | | | | | | | | | | | | | | added more tests for szip and more verbose output Description: Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8122] Purpose:Pedro Vicente Nunes2004-01-284-47/+60
| | | | | | | | | | | | | | | | | | h5repack new feature Description: in the SZIP settings, when the requested pixels per block parameter does not conform to the SZIP specifications, instead of returning without applying the filter, do an attempt to set this parameter to a valid value, issuing a warning in the process Solution: Platforms tested: linux solaris AIX Misc. update:
* [svn-r8121] Purpose:Pedro Vicente Nunes2004-01-283-138/+124
| | | | | | | | | | | | | | | | bug fix Description: avoid reading and writing data when one of the dimensions is 0 (attributes case ) Solution: linux solaris AIX Platforms tested: Misc. update: