From c348d453b583ec9092152e6aef1f7fa9854cf5d9 Mon Sep 17 00:00:00 2001 From: Larry Knox Date: Sat, 2 Feb 2019 08:02:48 -0600 Subject: Correct H5DIFF to PH5DIFF in *ctestS.sl.in.cmake list of parallel tests reserved for *ctestP.sl.cmake. Revise options to run batch tests and alternative options for cross compile in HPC/*-HDF5options.cmake. --- bin/batch/cori_ctestS.sl.in.cmake | 2 +- bin/batch/cori_knl_ctestS.sl.in.cmake | 2 +- bin/batch/ctestS.lsf.in.cmake | 2 +- bin/batch/ctestS.sl.in.cmake | 2 +- bin/batch/ray_ctestS.lsf.in.cmake | 2 +- config/cmake/scripts/HPC/par-HDF5options.cmake | 24 +++++++++++++++++------- config/cmake/scripts/HPC/ser-HDF5options.cmake | 16 ++++++++++------ 7 files changed, 32 insertions(+), 18 deletions(-) diff --git a/bin/batch/cori_ctestS.sl.in.cmake b/bin/batch/cori_ctestS.sl.in.cmake index 502db3f..cf68826 100644 --- a/bin/batch/cori_ctestS.sl.in.cmake +++ b/bin/batch/cori_ctestS.sl.in.cmake @@ -9,7 +9,7 @@ #SBATCH --job-name=h5_ctestS cd @HDF5_BINARY_DIR@ -CMD="ctest . -E TEST_PAR|H5DIFF|PERFORM|ph5example -C Release -j 32 -T test" +CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test" echo "Run $CMD. Test output will be in build/ctestS.out" $CMD >& ctestS.out diff --git a/bin/batch/cori_knl_ctestS.sl.in.cmake b/bin/batch/cori_knl_ctestS.sl.in.cmake index 0ec7bf7..7db4483 100644 --- a/bin/batch/cori_knl_ctestS.sl.in.cmake +++ b/bin/batch/cori_knl_ctestS.sl.in.cmake @@ -9,7 +9,7 @@ #SBATCH --job-name=h5_ctestS cd @HDF5_BINARY_DIR@ -CMD="ctest . -E TEST_PAR|H5DIFF|PERFORM|ph5example -C Release -j 32 -T test" +CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test" echo "Run $CMD. Test output will be in build/ctestS.out" $CMD >& ctestS.out diff --git a/bin/batch/ctestS.lsf.in.cmake b/bin/batch/ctestS.lsf.in.cmake index 5692574..7ef5af5 100644 --- a/bin/batch/ctestS.lsf.in.cmake +++ b/bin/batch/ctestS.lsf.in.cmake @@ -11,7 +11,7 @@ cd @HDF5_BINARY_DIR@ echo "Run command. Test output will be in build/ctestS.out" -ctest . -E 'TEST_PAR|H5DIFF|PERFORM' -C Release -j 32 -T test >& ctestS.out +ctest . -E 'TEST_PAR|PH5DIFF|PERFORM' -C Release -j 32 -T test >& ctestS.out ##$CMD >& ctestS.out echo "Done running command." diff --git a/bin/batch/ctestS.sl.in.cmake b/bin/batch/ctestS.sl.in.cmake index f772be9..98c1bcd 100644 --- a/bin/batch/ctestS.sl.in.cmake +++ b/bin/batch/ctestS.sl.in.cmake @@ -8,7 +8,7 @@ #SBATCH --job-name=h5_ctestS cd @HDF5_BINARY_DIR@ -CMD="ctest . -E TEST_PAR|H5DIFF|PERFORM|ph5example -C Release -j 32 -T test" +CMD="ctest . -E TEST_PAR|PH5DIFF|PERFORM|ph5example -C Release -j 32 -T test" echo "Run $CMD. Test output will be in build/ctestS.out" $CMD >& ctestS.out diff --git a/bin/batch/ray_ctestS.lsf.in.cmake b/bin/batch/ray_ctestS.lsf.in.cmake index cbc7130..d23a513 100644 --- a/bin/batch/ray_ctestS.lsf.in.cmake +++ b/bin/batch/ray_ctestS.lsf.in.cmake @@ -11,7 +11,7 @@ cd @HDF5_BINARY_DIR@ echo "Run command. Test output will be in build/ctestS.out" -ctest . -E 'TEST_PAR|H5DIFF|PERFORM|ph5example' -C Release -j 32 -T test >& ctestS.out +ctest . -E 'TEST_PAR|PH5DIFF|PERFORM|ph5example' -C Release -j 32 -T test >& ctestS.out ##$CMD >& ctestS.out echo "Done running command." diff --git a/config/cmake/scripts/HPC/par-HDF5options.cmake b/config/cmake/scripts/HPC/par-HDF5options.cmake index 0527995..68d35dc 100644 --- a/config/cmake/scripts/HPC/par-HDF5options.cmake +++ b/config/cmake/scripts/HPC/par-HDF5options.cmake @@ -100,6 +100,17 @@ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_THREADSAFE:BOOL=OFF") ### Create install package with external libraries (szip, zlib) set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON") + +#options to run test scripts in batch commands +set (LOCAL_BATCH_SCRIPT_COMMAND "sbatch") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_TEST:BOOL=ON") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=ctestS.sl") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=ctestP.sl") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_EXECUTABLE:STRING=srun") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_NUMPROC_FLAG:STRING=-n") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DMPIEXEC_MAX_NUMPROCS:STRING=6") + + ############################################################################################# ### use a toolchain file @@ -107,11 +118,10 @@ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/intel.cmake") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/GCC.cmake") -#options to run test scripts in batch commands -set (LOCAL_BATCH_TEST ON) -set (LOCAL_BATCH_SCRIPT_COMMAND "sbatch") -set (LOCAL_BATCH_SCRIPT_NAME "knl_ctestS.sl") -set (LOCAL_BATCH_SCRIPT_PARALLEL_NAME "knl_ctestP.sl") -set(MPIEXEC_EXECUTABLE "srun") - +#some additions and alternatives to cross compile on haswell for knl +#set (COMPILENODE_HWCOMPILE_MODULE "craype-haswell") +#set (COMPUTENODE_HWCOMPILE_MODULE "craype-mic-knl") +#set (SITE_BUILDNAME_SUFFIX "knl-intel17-SHARED" +#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl") +#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_PARALLEL_NAME:STRING=knl_ctestP.sl") ############################################################################################# diff --git a/config/cmake/scripts/HPC/ser-HDF5options.cmake b/config/cmake/scripts/HPC/ser-HDF5options.cmake index 71266ec..80c8b9e 100644 --- a/config/cmake/scripts/HPC/ser-HDF5options.cmake +++ b/config/cmake/scripts/HPC/ser-HDF5options.cmake @@ -100,6 +100,11 @@ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ALLOW_EXTERNAL_SUPPORT:STRIN ### Create install package with external libraries (szip, zlib) set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON") +#options to run test scripts in batch commands +set (LOCAL_BATCH_SCRIPT_COMMAND "sbatch") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_TEST:BOOL=ON") +set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=ctestS.sl") + ############################################################################################# ### use a toolchain file @@ -107,11 +112,10 @@ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_PACKAGE_EXTLIBS:BOOL=ON") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/crayle.cmake") #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/GCC.cmake") -#options to run test scripts in batch commands -set (LOCAL_BATCH_TEST ON) -set (LOCAL_BATCH_SCRIPT_COMMAND "sbatch") -set (LOCAL_BATCH_SCRIPT_NAME "knl_ctestS.sl") -set (LOCAL_BATCH_SCRIPT_PARALLEL_NAME "knl_ctestP.sl") -set(MPIEXEC_EXECUTABLE "srun") +#some additions and alternatives to cross compile on haswell for knl +#set (COMPILENODE_HWCOMPILE_MODULE "craype-haswell") +#set (COMPUTENODE_HWCOMPILE_MODULE "craype-mic-knl") +#set (SITE_BUILDNAME_SUFFIX "knl-intel17-SHARED" +#set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLOCAL_BATCH_SCRIPT_NAME:STRING=knl_ctestS.sl") ############################################################################################# -- cgit v0.12