From 046f1d7b1fd29c3caea904d3aa403fa4e9cae4b8 Mon Sep 17 00:00:00 2001 From: Allen Byrne Date: Fri, 6 Jul 2012 14:16:07 -0500 Subject: [svn-r22522] Merge trunk revision 22520 cmake files and h5dump/h5diff and configure to branch --- CMakeLists.txt | 75 ++- MANIFEST | 76 ++- c++/src/CMakeLists.txt | 3 + c++/test/CMakeLists.txt | 7 + config/cmake/CTestCustom.cmake | 7 +- config/cmake/ConfigureChecks.cmake | 591 ++++++++++++------- config/cmake/H5pubconf.h.in | 5 +- config/cmake/HDF5CXXTests.cpp | 56 ++ config/cmake/HDF5Tests.c | 135 +++-- config/cmake/HDF5UseFortran.cmake | 5 + config/cmake/HDFLibMacros.cmake | 18 +- config/cmake/HDFMacros.cmake | 31 + config/cmake/cacheinit.cmake | 8 + config/cmake/grepTest.cmake | 19 +- config/cmake/hdf5-config.cmake.install.in | 4 +- config/cmake/mccacheinit.cmake | 18 + config/cmake/runTest.cmake | 2 +- configure | 91 ++- configure.in | 29 +- fortran/src/CMakeLists.txt | 15 +- hl/c++/src/CMakeLists.txt | 3 + hl/fortran/src/CMakeLists.txt | 6 +- hl/src/CMakeLists.txt | 3 + hl/tools/CMakeLists.txt | 2 +- perform/CMakeLists.txt | 48 +- perform/sio_timer.h | 4 +- src/CMakeLists.txt | 14 +- src/H5private.h | 2 +- testpar/t_mpi.c | 6 +- testpar/testphdf5.c | 4 + tools/h5copy/CMakeLists.txt | 5 +- tools/h5diff/CMakeLists.txt | 546 +++++++++--------- tools/h5diff/h5diffgentest.c | 16 + tools/h5diff/testfiles/h5diff_450.txt | 3 + tools/h5diff/testfiles/h5diff_451.txt | 2 + tools/h5diff/testfiles/h5diff_471.txt | 38 ++ tools/h5diff/testfiles/h5diff_472.txt | 3 + tools/h5diff/testfiles/h5diff_473.txt | 3 + tools/h5diff/testfiles/h5diff_474.txt | 3 + tools/h5diff/testfiles/h5diff_475.txt | 3 + tools/h5diff/testh5diff.sh | 16 + tools/h5dump/CMakeLists.txt | 30 +- tools/h5dump/Makefile.am | 2 +- tools/h5dump/Makefile.in | 12 +- tools/h5dump/h5dump_xml.c | 6 +- tools/h5dump/h5dumpgentest.c | 926 ++++++++++++++++++++++++++++-- tools/h5dump/testh5dump.sh.in | 244 +------- tools/h5dump/testh5dumppbits.sh.in | 495 ++++++++++++++++ tools/h5dump/testh5dumpxml.sh.in | 171 +++++- tools/h5import/CMakeLists.txt | 13 +- tools/h5import/h5importtestutil.sh | 10 +- tools/h5import/testfiles/txtin8.txt | 15 + tools/h5import/testfiles/txtuin16.txt | 15 + tools/h5jam/CMakeLists.txt | 5 +- tools/h5jam/h5jam.c | 4 +- tools/h5jam/h5unjam.c | 3 + tools/h5ls/CMakeLists.txt | 5 +- tools/h5ls/h5ls.c | 16 +- tools/h5repack/CMakeLists.txt | 5 +- tools/h5stat/CMakeLists.txt | 8 +- tools/lib/CMakeLists.txt | 3 + tools/lib/h5tools.c | 9 +- tools/lib/h5tools_dump.c | 96 +++- tools/misc/CMakeLists.txt | 7 +- tools/misc/h5debug.c | 58 +- tools/testfiles/charsets.ddl | 27 + tools/testfiles/charsets.h5 | Bin 0 -> 8288 bytes tools/testfiles/tattrintsize.ddl | 569 ++++++++++++++++++ tools/testfiles/tattrintsize.h5 | Bin 0 -> 13016 bytes tools/testfiles/tcmpdattrintsize.ddl | 316 ++++++++++ tools/testfiles/tcmpdattrintsize.h5 | Bin 0 -> 47016 bytes tools/testfiles/tcmpdintsize.ddl | 316 ++++++++++ tools/testfiles/tcmpdintsize.h5 | Bin 0 -> 49760 bytes tools/testfiles/tdset_idx.ls | 36 -- windows/src/H5pubconf.h | 2 +- 75 files changed, 4315 insertions(+), 1034 deletions(-) create mode 100644 config/cmake/HDF5CXXTests.cpp create mode 100644 tools/h5diff/testfiles/h5diff_471.txt create mode 100644 tools/h5diff/testfiles/h5diff_472.txt create mode 100644 tools/h5diff/testfiles/h5diff_473.txt create mode 100644 tools/h5diff/testfiles/h5diff_474.txt create mode 100644 tools/h5diff/testfiles/h5diff_475.txt create mode 100644 tools/h5dump/testh5dumppbits.sh.in create mode 100644 tools/h5import/testfiles/txtin8.txt create mode 100644 tools/h5import/testfiles/txtuin16.txt create mode 100644 tools/testfiles/charsets.ddl create mode 100644 tools/testfiles/charsets.h5 create mode 100644 tools/testfiles/tattrintsize.ddl create mode 100644 tools/testfiles/tattrintsize.h5 create mode 100644 tools/testfiles/tcmpdattrintsize.ddl create mode 100644 tools/testfiles/tcmpdattrintsize.h5 create mode 100644 tools/testfiles/tcmpdintsize.ddl create mode 100644 tools/testfiles/tcmpdintsize.h5 delete mode 100644 tools/testfiles/tdset_idx.ls diff --git a/CMakeLists.txt b/CMakeLists.txt index 5543b48..2d025e2 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -170,6 +170,8 @@ STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_MINOR[ \t]+([0-9]*).*$" "\\1" H5_VERS_MINOR ${_h5public_h_contents}) STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_RELEASE[ \t]+([0-9]*).*$" "\\1" H5_VERS_RELEASE ${_h5public_h_contents}) +STRING (REGEX REPLACE ".*#define[ \t]+H5_VERS_SUBRELEASE[ \t]+\"([0-9A-Za-z._]*)\".*$" + "\\1" H5_VERS_SUBRELEASE ${_h5public_h_contents}) #MESSAGE (STATUS "VERSION: ${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}-${H5_VERS_SUBRELEASE}") #----------------------------------------------------------------------------- @@ -192,7 +194,11 @@ SET (HDF5_PACKAGE_NAME "HDF5") SET (HDF5_PACKAGE_VERSION "${H5_VERS_MAJOR}.${H5_VERS_MINOR}.${H5_VERS_RELEASE}") SET (HDF5_PACKAGE_VERSION_MAJOR "${H5_VERS_MAJOR}.${H5_VERS_MINOR}") SET (HDF5_PACKAGE_VERSION_MINOR "${H5_VERS_RELEASE}") -SET (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}") +IF (NOT "${H5_VERS_SUBRELEASE}" STREQUAL "") + SET (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}-${H5_VERS_SUBRELEASE}") +ELSE (NOT "${H5_VERS_SUBRELEASE}" STREQUAL "") + SET (HDF5_PACKAGE_VERSION_STRING "${HDF5_PACKAGE_VERSION}") +ENDIF (NOT "${H5_VERS_SUBRELEASE}" STREQUAL "") SET (HDF5_PACKAGE_SOVERSION "${H5_SOVERS_MAJOR}.${H5_SOVERS_MINOR}.${H5_SOVERS_RELEASE}") SET (HDF5_PACKAGE_STRING "${HDF5_PACKAGE_NAME} ${HDF5_PACKAGE_VERSION_STRING}") SET (HDF5_PACKAGE_TARNAME "hdf5") @@ -295,6 +301,15 @@ IF (HDF5_ENABLE_COVERAGE) ENDIF (HDF5_ENABLE_COVERAGE) #----------------------------------------------------------------------------- +# Option to indicate using dmalloc +#----------------------------------------------------------------------------- +# OPTION (HDF5_ENABLE_USING_DMALLOC "Indicate that dmalloc is used" OFF) +# IF (HDF5_ENABLE_USING_DMALLOC) +# FIND_PACKAGE (DMALLOC) +# SET (H5_HAVE_DMALLOC DMALLOC_FOUND) +# ENDIF (HDF5_ENABLE_USING_DMALLOC) + +#----------------------------------------------------------------------------- # Option to indicate using a memory checker #----------------------------------------------------------------------------- OPTION (HDF5_ENABLE_USING_MEMCHECKER "Indicate that a memory checker is used" OFF) @@ -353,16 +368,23 @@ IF (CMAKE_BUILD_TYPE MATCHES Debug) -DH5I_DEBUG -DH5HL_DEBUG -DH5HG_DEBUG -DH5G_DEBUG -DH5F_DEBUG -DH5E_DEBUG -DH5D_DEBUG -DH5B_DEBUG -DH5AC_DEBUG -UNDEBUG ) + # Enable tracing of the API OPTION (HDF5_ENABLE_TRACE "Enable API tracing capability" ON) IF (HDF5_ENABLE_TRACE) ADD_DEFINITIONS (-DH5_DEBUG_API ) ENDIF (HDF5_ENABLE_TRACE) + # Enable instrumenting of the library's internal operations + OPTION (HDF5_ENABLE_INSTRUMENT "Instrument The library" OFF) + IF (HDF5_ENABLE_INSTRUMENT) + SET (H5_HAVE_INSTRUMENTED_LIBRARY 1) + ENDIF (HDF5_ENABLE_INSTRUMENT) + MARK_AS_ADVANCED (HDF5_Enable_Instrument) #-- NMake Makefiles will overwhelm the console with warnings if -Wall is used. IF (NOT WIN32) ADD_DEFINITIONS (-Wall) ENDIF (NOT WIN32) ELSE (CMAKE_BUILD_TYPE MATCHES Debug) - ADD_DEFINITIONS (-UH5_DEBUG_API -DNDEBUG) + ADD_DEFINITIONS (-DNDEBUG) OPTION (HDF5_ENABLE_TRACE "Enable API tracing capability" OFF) IF (HDF5_ENABLE_TRACE) ADD_DEFINITIONS (-DH5_DEBUG_API ) @@ -455,6 +477,7 @@ IF (HDF5_ENABLE_PARALLEL) # and once set, they are cached as false and not regenerated SET (CMAKE_REQUIRED_LIBRARIES "${MPI_C_LIBRARIES}" ) CHECK_FUNCTION_EXISTS (MPI_File_get_size H5_HAVE_MPI_GET_SIZE) + SET (H5_MPI_FILE_SET_SIZE_BIG 1) # Used by Fortran + MPI CHECK_SYMBOL_EXISTS (MPI_Comm_c2f "${MPI_C_INCLUDE_PATH}/mpi.h" H5_HAVE_MPI_MULTI_LANG_Comm) CHECK_SYMBOL_EXISTS (MPI_Info_c2f "${MPI_C_INCLUDE_PATH}/mpi.h" H5_HAVE_MPI_MULTI_LANG_Info) @@ -469,6 +492,7 @@ IF (H5_HAVE_PARALLEL) ENDIF (MPI_C_LINK_FLAGS) ENDIF (H5_HAVE_PARALLEL) +SET (DEFAULT_API_VERSION "v110") #----------------------------------------------------------------------------- # Option to use 1.6.x API #----------------------------------------------------------------------------- @@ -476,6 +500,7 @@ OPTION (HDF5_USE_16_API_DEFAULT "Use the HDF5 1.6.x API by default" OFF) SET (H5_USE_16_API_DEFAULT 0) IF (HDF5_USE_16_API_DEFAULT) SET (H5_USE_16_API_DEFAULT 1) + SET (DEFAULT_API_VERSION "v16") ENDIF (HDF5_USE_16_API_DEFAULT) #----------------------------------------------------------------------------- @@ -485,6 +510,7 @@ OPTION (HDF5_USE_18_API_DEFAULT "Use the HDF5 1.8.x API by default" OFF) SET (H5_USE_18_API_DEFAULT 0) IF (HDF5_USE_18_API_DEFAULT) SET (H5_USE_18_API_DEFAULT 1) + SET (DEFAULT_API_VERSION "v18") ENDIF (HDF5_USE_18_API_DEFAULT) #----------------------------------------------------------------------------- @@ -546,7 +572,7 @@ IF (HDF5_ENABLE_Z_LIB_SUPPORT) SET (H5_HAVE_LIBZ 1) MESSAGE (STATUS "Filter ZLIB is built") ELSE (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "SVN" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") - MESSAGE (FATAL " ZLib is Required for ZLib support in HDF5") + MESSAGE (FATAL_ERROR " ZLib is Required for ZLib support in HDF5") ENDIF (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "SVN" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") ENDIF (ZLIB_FOUND) ELSE (NOT H5_ZLIB_HEADER) @@ -743,6 +769,9 @@ IF (EXISTS "${HDF5_SOURCE_DIR}/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/c++") IF (HDF5_ENABLE_PARALLEL) MESSAGE (FATAL " **** Parallel and C++ options are mutually exclusive **** ") ENDIF (HDF5_ENABLE_PARALLEL) + IF (CMAKE_NO_STD_NAMESPACE) + SET (H5_NO_STD 1) + ENDIF (CMAKE_NO_STD_NAMESPACE) ADD_SUBDIRECTORY (${HDF5_SOURCE_DIR}/c++ ${PROJECT_BINARY_DIR}/c++) ENDIF (HDF5_BUILD_CPP_LIB) ENDIF (EXISTS "${HDF5_SOURCE_DIR}/c++" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/c++") @@ -864,6 +893,11 @@ CONFIGURE_FILE ( ${HDF5_RESOURCES_DIR}/libhdf5.settings.cmake.in ${HDF5_BINARY_DIR}/libhdf5.settings @ONLY ) +INSTALL ( + FILES ${HDF5_BINARY_DIR}/libhdf5.settings + DESTINATION ${HDF5_INSTALL_LIB_DIR} + COMPONENT libraries +) #----------------------------------------------------------------------------- # Add Document File(s) to CMake Install @@ -916,7 +950,7 @@ ENDIF (NOT HDF5_EXTERNALLY_CONFIGURED) # Set the cpack variables #----------------------------------------------------------------------------- IF (NOT HDF5_EXTERNALLY_CONFIGURED AND NOT HDF5_NO_PACKAGES) - SET (CPACK_PACKAGE_VENDOR "HDF Group") + SET (CPACK_PACKAGE_VENDOR "HDF_Group") SET (CPACK_PACKAGE_NAME "${HDF5_PACKAGE_NAME}") SET (CPACK_PACKAGE_INSTALL_DIRECTORY "${HDF5_PACKAGE_NAME}") SET (CPACK_PACKAGE_INSTALL_REGISTRY_KEY "${HDF5_PACKAGE_NAME}-${HDF5_PACKAGE_VERSION}-${LIB_TYPE}") @@ -930,14 +964,41 @@ IF (NOT HDF5_EXTERNALLY_CONFIGURED AND NOT HDF5_NO_PACKAGES) SET (CPACK_RESOURCE_FILE_README "${CMAKE_CURRENT_SOURCE_DIR}/release_docs/RELEASE.txt") ENDIF (EXISTS "${HDF5_SOURCE_DIR}/release_docs") SET (CPACK_PACKAGE_RELOCATABLE TRUE) + IF (WIN32) - SET (CPACK_NSIS_CONTACT "help@hdfgroup.org") + SET (CPACK_MONOLITHIC_INSTALL ON) + SET (CPACK_NSIS_CONTACT "${HDF5_PACKAGE_BUGREPORT}") SET (CPACK_NSIS_MODIFY_PATH ON) SET (CPACK_NSIS_PACKAGE_NAME "HDF5 ${HDF5_PACKAGE_VERSION}") ELSE (WIN32) - SET (CPACK_RPM_COMPONENT_INSTALL ON) - SET (CPACK_ARCHIVE_COMPONENT_INSTALL ON) + SET (CPACK_PACKAGING_INSTALL_PREFIX "/usr") SET (CPACK_COMPONENTS_ALL_IN_ONE_PACKAGE ON) + + SET (CPACK_DEBIAN_PACKAGE_SECTION "Libraries") + SET (CPACK_DEBIAN_PACKAGE_MAINTAINER "${HDF5_PACKAGE_BUGREPORT}") + + SET (CPACK_RPM_COMPONENT_INSTALL ON) + SET (CPACK_RPM_PACKAGE_RELOCATABLE ON) + SET (CPACK_RPM_PACKAGE_LICENSE "BSD-style") + SET (CPACK_RPM_PACKAGE_GROUP "Development/Libraries") + SET (CPACK_RPM_PACKAGE_URL "${HDF5_PACKAGE_URL}") + SET (CPACK_RPM_PACKAGE_SUMMARY "HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.") + SET (CPACK_RPM_PACKAGE_DESCRIPTION + "The HDF5 technology suite includes: + + * A versatile data model that can represent very complex data objects and a wide variety of metadata. + + * A completely portable file format with no limit on the number or size of data objects in the collection. + + * A software library that runs on a range of computational platforms, from laptops to massively parallel systems, and implements a high-level API with C, C++, Fortran 90, and Java interfaces. + + * A rich set of integrated performance features that allow for access time and storage space optimizations. + + * Tools and applications for managing, manipulating, viewing, and analyzing the data in the collection. + +The HDF5 data model, file format, API, library, and tools are open and distributed without charge. +" + ) ENDIF (WIN32) INCLUDE(InstallRequiredSystemLibraries) diff --git a/MANIFEST b/MANIFEST index dd91d99..7dc3dc0 100644 --- a/MANIFEST +++ b/MANIFEST @@ -1139,6 +1139,7 @@ ./tools/h5dump/h5dump_xml.h ./tools/h5dump/h5dumpgentest.c ./tools/h5dump/testh5dump.sh.in +./tools/h5dump/testh5dumppbits.sh.in ./tools/h5dump/testh5dumpxml.sh.in ./tools/h5dump/binread.c @@ -1151,45 +1152,47 @@ ./tools/h5import/h5importtestutil.sh # testfiles for h5import -./tools/h5import/testfiles/binin32.h5 +./tools/h5import/testfiles/binfp64.conf +./tools/h5import/testfiles/binfp64.h5 +./tools/h5import/testfiles/binin16.conf ./tools/h5import/testfiles/binin16.h5 -./tools/h5import/testfiles/txtfp32.txt -./tools/h5import/testfiles/txtstr.conf -./tools/h5import/testfiles/txtfp32.conf -./tools/h5import/testfiles/binin8w.conf +./tools/h5import/testfiles/binin32.conf +./tools/h5import/testfiles/binin32.h5 +./tools/h5import/testfiles/binin8.conf ./tools/h5import/testfiles/binin8.h5 -./tools/h5import/testfiles/txtfp64.conf -./tools/h5import/testfiles/binuin32.conf -./tools/h5import/testfiles/txtuin32.txt +./tools/h5import/testfiles/binin8w.conf +./tools/h5import/testfiles/binin8w.h5 ./tools/h5import/testfiles/binuin16.conf -./tools/h5import/testfiles/txtstr.h5 +./tools/h5import/testfiles/binuin16.h5 +./tools/h5import/testfiles/binuin32.conf +./tools/h5import/testfiles/binuin32.h5 +./tools/h5import/testfiles/textpfe.conf +./tools/h5import/testfiles/textpfe.h5 +./tools/h5import/testfiles/textpfe64.txt +./tools/h5import/testfiles/txtfp32.conf ./tools/h5import/testfiles/txtfp32.h5 -./tools/h5import/testfiles/txtin32.h5 +./tools/h5import/testfiles/txtfp32.txt +./tools/h5import/testfiles/txtfp64.conf +./tools/h5import/testfiles/txtfp64.h5 +./tools/h5import/testfiles/txtfp64.txt +./tools/h5import/testfiles/txtin16.conf ./tools/h5import/testfiles/txtin16.h5 -./tools/h5import/testfiles/binin8w.h5 +./tools/h5import/testfiles/txtin16.txt +./tools/h5import/testfiles/txtin32.conf +./tools/h5import/testfiles/txtin32.h5 ./tools/h5import/testfiles/txtin32.txt -./tools/h5import/testfiles/binfp64.conf -./tools/h5import/testfiles/binin8.conf ./tools/h5import/testfiles/txtin8.conf -./tools/h5import/testfiles/binfp64.h5 -./tools/h5import/testfiles/txtstr.txt -./tools/h5import/testfiles/txtin32.conf -./tools/h5import/testfiles/txtin16.conf ./tools/h5import/testfiles/txtin8.h5 -./tools/h5import/testfiles/txtuin32.conf +./tools/h5import/testfiles/txtin8.txt ./tools/h5import/testfiles/txtuin16.conf -./tools/h5import/testfiles/binin32.conf -./tools/h5import/testfiles/binin16.conf -./tools/h5import/testfiles/txtfp64.h5 -./tools/h5import/testfiles/txtin16.txt -./tools/h5import/testfiles/txtfp64.txt -./tools/h5import/testfiles/binuin32.h5 -./tools/h5import/testfiles/binuin16.h5 -./tools/h5import/testfiles/txtuin32.h5 ./tools/h5import/testfiles/txtuin16.h5 -./tools/h5import/testfiles/textpfe.conf -./tools/h5import/testfiles/textpfe64.txt -./tools/h5import/testfiles/textpfe.h5 +./tools/h5import/testfiles/txtuin16.txt +./tools/h5import/testfiles/txtuin32.conf +./tools/h5import/testfiles/txtuin32.h5 +./tools/h5import/testfiles/txtuin32.txt +./tools/h5import/testfiles/txtstr.conf +./tools/h5import/testfiles/txtstr.h5 +./tools/h5import/testfiles/txtstr.txt # h5diff sources ./tools/h5diff/Makefile.am @@ -1301,6 +1304,8 @@ ./tools/h5stat/testfiles/h5stat_tsohm.h5 # h5dump test files +./tools/testfiles/charsets.h5 +./tools/testfiles/charsets.ddl ./tools/testfiles/family_file00000.h5 ./tools/testfiles/family_file00001.h5 ./tools/testfiles/family_file00002.h5 @@ -1355,6 +1360,8 @@ ./tools/testfiles/tattr-3.ddl ./tools/testfiles/tattr-4_be.ddl ./tools/testfiles/tattr.h5 +./tools/testfiles/tattrintsize.ddl +./tools/testfiles/tattrintsize.h5 ./tools/testfiles/tattr4_be.h5 ./tools/testfiles/tattrreg.h5 ./tools/testfiles/tattrreg.ddl @@ -1364,6 +1371,10 @@ ./tools/testfiles/tbitfields.h5 ./tools/testfiles/tchar.h5 ./tools/testfiles/tchar1.ddl +./tools/testfiles/tcmpdattrintsize.ddl +./tools/testfiles/tcmpdintsize.ddl +./tools/testfiles/tcmpdattrintsize.h5 +./tools/testfiles/tcmpdintsize.h5 ./tools/testfiles/tcomp-1.ddl ./tools/testfiles/tcomp-2.ddl ./tools/testfiles/tcomp-3.ddl @@ -1889,6 +1900,11 @@ ./tools/h5diff/testfiles/h5diff_467.txt ./tools/h5diff/testfiles/h5diff_468.txt ./tools/h5diff/testfiles/h5diff_469.txt +./tools/h5diff/testfiles/h5diff_471.txt +./tools/h5diff/testfiles/h5diff_472.txt +./tools/h5diff/testfiles/h5diff_473.txt +./tools/h5diff/testfiles/h5diff_474.txt +./tools/h5diff/testfiles/h5diff_475.txt ./tools/h5diff/testfiles/h5diff_480.txt ./tools/h5diff/testfiles/h5diff_481.txt ./tools/h5diff/testfiles/h5diff_482.txt @@ -2308,6 +2324,7 @@ ./config/cmake/FindSZIP.cmake ./config/cmake/ConversionTests.c ./config/cmake/GetTimeOfDayTest.cpp +./config/cmake/HDF5CXXTests.cpp ./config/cmake/HDF5Tests.c ./config/cmake/xlatefile.c ./config/cmake/CheckTypeSize.cmake @@ -2335,6 +2352,7 @@ ./config/cmake/CPack.cmake ./config/cmake/NSIS.template.in ./config/cmake/NSIS.InstallOptions.ini.in + ./CMakeLists.txt ./CTestConfig.cmake ./c++/CMakeLists.txt diff --git a/c++/src/CMakeLists.txt b/c++/src/CMakeLists.txt index d2bc71a..375bd4a 100644 --- a/c++/src/CMakeLists.txt +++ b/c++/src/CMakeLists.txt @@ -103,6 +103,9 @@ INSTALL ( # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_CPP_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} cpplibraries) + INSTALL ( TARGETS ${HDF5_CPP_LIB_TARGET} diff --git a/c++/test/CMakeLists.txt b/c++/test/CMakeLists.txt index fa5e2fd..7f4437c 100644 --- a/c++/test/CMakeLists.txt +++ b/c++/test/CMakeLists.txt @@ -44,6 +44,13 @@ TARGET_LINK_LIBRARIES (cpp_testhdf5 ) SET_TARGET_PROPERTIES (cpp_testhdf5 PROPERTIES FOLDER test/cpp) +ADD_CUSTOM_COMMAND ( + TARGET cpp_testhdf5 + POST_BUILD + COMMAND ${CMAKE_COMMAND} + ARGS -E copy_if_different ${HDF5_CPP_TEST_SOURCE_DIR}/th5s.h5 ${PROJECT_BINARY_DIR}/th5s.h5 +) + ADD_TEST (NAME cpp_testhdf5 COMMAND $) IF (HDF5_TEST_VFD) diff --git a/config/cmake/CTestCustom.cmake b/config/cmake/CTestCustom.cmake index e708a00..b54bedc 100755 --- a/config/cmake/CTestCustom.cmake +++ b/config/cmake/CTestCustom.cmake @@ -5,14 +5,15 @@ SET (CTEST_CUSTOM_WARNING_EXCEPTION "H5detect.c.[0-9]+.[ \t]*:[ \t]*warning C4090:" "H5detect.c.[0-9]+.[ \t]*:[ \t]*warning:[ \t]*passing argument" "H5detect.c[0-9 \t:]*warning:[ \t]*passing argument" - "H5detect.c[0-9 \t:]*note:[ \t]*expected .void .. but argument is of type .volatile" - "include/string.h[0-9 \t:]*note:[ \t]*expected .void .. but argument is of type .volatile" - "note:[ \t]*expected .void .. but argument is of type .volatile" + "note.*expected.*void.*but argument is of type.*volatile" "H5Tconv.c[0-9 \t:]*warning:[ \t]*comparison is always false due to limited range of data type" "H5Ztrans.c.[0-9]+.[ \t]*:[ \t]*warning C4244" "SZIP.src.*:[ \t]*warning" "POSIX name for this item is deprecated" "disabling jobserver mode" + "config.cmake.xlatefile.c" + "warning.*implicit declaration of function" +# "fpp:[ \t]*warning:[ \t]*cannot remove H5_DEBUG_API - not a predefined macro" ) SET (CTEST_CUSTOM_MEMCHECK_IGNORE diff --git a/config/cmake/ConfigureChecks.cmake b/config/cmake/ConfigureChecks.cmake index 0a078b6..0940418 100644 --- a/config/cmake/ConfigureChecks.cmake +++ b/config/cmake/ConfigureChecks.cmake @@ -11,6 +11,7 @@ INCLUDE (${CMAKE_ROOT}/Modules/CheckTypeSize.cmake) INCLUDE (${CMAKE_ROOT}/Modules/CheckVariableExists.cmake) INCLUDE (${CMAKE_ROOT}/Modules/CheckFortranFunctionExists.cmake) INCLUDE (${CMAKE_ROOT}/Modules/TestBigEndian.cmake) +INCLUDE (${CMAKE_ROOT}/Modules/TestForSTDNamespace.cmake) #----------------------------------------------------------------------------- # Always SET this for now IF we are on an OS X box @@ -37,18 +38,6 @@ ENDIF (HDF5_Enable_Clear_File_Buffers) MARK_AS_ADVANCED (HDF5_Enable_Clear_File_Buffers) #----------------------------------------------------------------------------- -# Option for --enable-instrument -#----------------------------------------------------------------------------- -IF (CMAKE_BUILD_TYPE MATCHES Debug) - SET (HDF5_Enable_Instrument ON) -ENDIF (CMAKE_BUILD_TYPE MATCHES Debug) -OPTION (HDF5_Enable_Instrument "Instrument The library" HDF5_Enable_Instrument) -IF (HDF5_Enable_Instrument) - SET (H5_HAVE_INSTRUMENTED_LIBRARY 1) -ENDIF (HDF5_Enable_Instrument) -MARK_AS_ADVANCED (HDF5_Enable_Instrument) - -#----------------------------------------------------------------------------- # Option for --enable-strict-format-checks #----------------------------------------------------------------------------- OPTION (HDF5_STRICT_FORMAT_CHECKS "Whether to perform strict file format checks" OFF) @@ -132,10 +121,13 @@ IF (WIN32) IF (MINGW) SET (H5_HAVE_MINGW 1) SET (WINDOWS 1) # MinGW tries to imitate Windows + SET (CMAKE_REQUIRED_FLAGS "-DWIN32_LEAN_AND_MEAN=1 -DNOGDI=1") ENDIF (MINGW) SET (H5_HAVE_WIN32_API 1) + SET (CMAKE_REQUIRED_LIBRARIES "ws2_32.lib;wsock32.lib") IF (NOT UNIX AND NOT CYGWIN AND NOT MINGW) SET (WINDOWS 1) + SET (CMAKE_REQUIRED_FLAGS "/DWIN32_LEAN_AND_MEAN=1 /DNOGDI=1") IF (MSVC) SET (H5_HAVE_VISUAL_STUDIO 1) ENDIF (MSVC) @@ -153,6 +145,8 @@ ENDIF (WIN32) # Should the Default Virtual File Driver be compiled? # This is hard-coded now but option should added to match configure # +SET (H5_DEFAULT_VFD H5FD_SEC2) + IF (WINDOWS) SET (H5_HAVE_WINDOWS 1) # ---------------------------------------------------------------------- @@ -160,24 +154,16 @@ IF (WINDOWS) # that is, "drive-letter:\" (e.g. "C:") or "drive-letter:/" (e.g. "C:/"). # (This flag should be _unset_ for all machines, except for Windows) SET (H5_HAVE_WINDOW_PATH 1) - SET (LINK_LIBS ${LINK_LIBS} "kernel32") ENDIF (WINDOWS) -SET (H5_DEFAULT_VFD H5FD_SEC2) IF (WINDOWS) - SET (H5_HAVE_IO_H 1) - SET (H5_HAVE_SETJMP_H 1) SET (H5_HAVE_STDDEF_H 1) SET (H5_HAVE_SYS_STAT_H 1) - SET (H5_HAVE_SYS_TIMEB_H 1) SET (H5_HAVE_SYS_TYPES_H 1) - SET (H5_HAVE_WINSOCK_H 1) SET (H5_HAVE_LIBM 1) SET (H5_HAVE_STRDUP 1) SET (H5_HAVE_SYSTEM 1) - SET (H5_HAVE_DIFFTIME 1) SET (H5_HAVE_LONGJMP 1) - SET (H5_STDC_HEADERS 1) IF (NOT MINGW) SET (H5_HAVE_GETHOSTNAME 1) ENDIF (NOT MINGW) @@ -187,6 +173,11 @@ IF (WINDOWS) SET (H5_HAVE_TIMEZONE 1) SET (H5_HAVE_GETTIMEOFDAY 1) SET (H5_LONE_COLON 0) + IF (MINGW) + SET (H5_HAVE_WINSOCK2_H 1) + ENDIF (MINGW) + SET (H5_HAVE_LIBWS2_32 1) + SET (H5_HAVE_LIBWSOCK32 1) ENDIF (WINDOWS) #----------------------------------------------------------------------------- @@ -194,9 +185,7 @@ ENDIF (WINDOWS) # something not quite correct with the actual test implementation. This affects # the 'dt_arith' test and most likely lots of other code # ---------------------------------------------------------------------------- -IF (WINDOWS) - SET (H5_FP_TO_ULLONG_RIGHT_MAXIMUM "" CACHE INTERNAL "") -ENDIF (WINDOWS) +SET (H5_FP_TO_ULLONG_RIGHT_MAXIMUM "" CACHE INTERNAL "") # ---------------------------------------------------------------------- # END of WINDOWS Hard code Values @@ -210,11 +199,11 @@ ENDIF (CYGWIN) # Check for the math library "m" #----------------------------------------------------------------------------- IF (NOT WINDOWS) - CHECK_LIBRARY_EXISTS_CONCAT ("m" random H5_HAVE_LIBM) + CHECK_LIBRARY_EXISTS_CONCAT ("m" ceil H5_HAVE_LIBM) + CHECK_LIBRARY_EXISTS_CONCAT ("ws2_32" WSAStartup H5_HAVE_LIBWS2_32) + CHECK_LIBRARY_EXISTS_CONCAT ("wsock32" gethostbyname H5_HAVE_LIBWSOCK32) ENDIF (NOT WINDOWS) -CHECK_LIBRARY_EXISTS_CONCAT ("ws2_32" WSAStartup H5_HAVE_LIBWS2_32) -CHECK_LIBRARY_EXISTS_CONCAT ("wsock32" gethostbyname H5_HAVE_LIBWSOCK32) CHECK_LIBRARY_EXISTS_CONCAT ("ucb" gethostname H5_HAVE_LIBUCB) CHECK_LIBRARY_EXISTS_CONCAT ("socket" connect H5_HAVE_LIBSOCKET) CHECK_LIBRARY_EXISTS ("c" gethostbyname "" NOT_NEED_LIBNSL) @@ -223,13 +212,132 @@ IF (NOT NOT_NEED_LIBNSL) CHECK_LIBRARY_EXISTS_CONCAT ("nsl" gethostbyname H5_HAVE_LIBNSL) ENDIF (NOT NOT_NEED_LIBNSL) +# For other tests to use the same libraries +SET (CMAKE_REQUIRED_LIBRARIES ${CMAKE_REQUIRED_LIBRARIES} ${LINK_LIBS}) SET (USE_INCLUDES "") IF (WINDOWS) SET (USE_INCLUDES ${USE_INCLUDES} "windows.h") ENDIF (WINDOWS) -TEST_BIG_ENDIAN(H5_WORDS_BIGENDIAN) +IF (NOT WINDOWS) + TEST_BIG_ENDIAN(H5_WORDS_BIGENDIAN) +ENDIF (NOT WINDOWS) + +# For other specific tests, use this MACRO. +MACRO (HDF5_FUNCTION_TEST OTHER_TEST) + IF ("H5_${OTHER_TEST}" MATCHES "^H5_${OTHER_TEST}$") + SET (MACRO_CHECK_FUNCTION_DEFINITIONS "-D${OTHER_TEST} ${CMAKE_REQUIRED_FLAGS}") + SET (OTHER_TEST_ADD_LIBRARIES) + IF (CMAKE_REQUIRED_LIBRARIES) + SET (OTHER_TEST_ADD_LIBRARIES "-DLINK_LIBRARIES:STRING=${CMAKE_REQUIRED_LIBRARIES}") + ENDIF (CMAKE_REQUIRED_LIBRARIES) + + FOREACH (def ${HDF5_EXTRA_TEST_DEFINITIONS}) + SET (MACRO_CHECK_FUNCTION_DEFINITIONS "${MACRO_CHECK_FUNCTION_DEFINITIONS} -D${def}=${${def}}") + ENDFOREACH (def) + + FOREACH (def + HAVE_SYS_TIME_H + HAVE_UNISTD_H + HAVE_SYS_TYPES_H + HAVE_SYS_SOCKET_H + ) + IF ("${H5_${def}}") + SET (MACRO_CHECK_FUNCTION_DEFINITIONS "${MACRO_CHECK_FUNCTION_DEFINITIONS} -D${def}") + ENDIF ("${H5_${def}}") + ENDFOREACH (def) + + IF (LARGEFILE) + SET (MACRO_CHECK_FUNCTION_DEFINITIONS + "${MACRO_CHECK_FUNCTION_DEFINITIONS} -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE" + ) + ENDIF (LARGEFILE) + + #MESSAGE (STATUS "Performing ${OTHER_TEST}") + TRY_COMPILE (${OTHER_TEST} + ${CMAKE_BINARY_DIR} + ${HDF5_RESOURCES_DIR}/HDF5Tests.c + CMAKE_FLAGS -DCOMPILE_DEFINITIONS:STRING=${MACRO_CHECK_FUNCTION_DEFINITIONS} + "${OTHER_TEST_ADD_LIBRARIES}" + OUTPUT_VARIABLE OUTPUT + ) + IF (${OTHER_TEST}) + SET (H5_${OTHER_TEST} 1 CACHE INTERNAL "Other test ${FUNCTION}") + MESSAGE (STATUS "Performing Other Test ${OTHER_TEST} - Success") + ELSE (${OTHER_TEST}) + MESSAGE (STATUS "Performing Other Test ${OTHER_TEST} - Failed") + SET (H5_${OTHER_TEST} "" CACHE INTERNAL "Other test ${FUNCTION}") + FILE (APPEND ${CMAKE_BINARY_DIR}/CMakeFiles/CMakeError.log + "Performing Other Test ${OTHER_TEST} failed with the following output:\n" + "${OUTPUT}\n" + ) + ENDIF (${OTHER_TEST}) + ENDIF ("H5_${OTHER_TEST}" MATCHES "^H5_${OTHER_TEST}$") +ENDMACRO (HDF5_FUNCTION_TEST) + +#----------------------------------------------------------------------------- +# Check for these functions before the time headers are checked +#----------------------------------------------------------------------------- +HDF5_FUNCTION_TEST (STDC_HEADERS) + +CHECK_FUNCTION_EXISTS (difftime H5_HAVE_DIFFTIME) +#CHECK_FUNCTION_EXISTS (gettimeofday H5_HAVE_GETTIMEOFDAY) +# Since gettimeofday is not defined any where standard, lets look in all the +# usual places. On MSVC we are just going to use ::clock() +IF (NOT MSVC) + IF ("H5_HAVE_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_TIME_GETTIMEOFDAY$") + TRY_COMPILE (HAVE_TIME_GETTIMEOFDAY + ${CMAKE_BINARY_DIR} + ${HDF5_RESOURCES_DIR}/GetTimeOfDayTest.cpp + COMPILE_DEFINITIONS -DTRY_TIME_H + OUTPUT_VARIABLE OUTPUT + ) + IF (HAVE_TIME_GETTIMEOFDAY STREQUAL "TRUE") + SET (H5_HAVE_TIME_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_TIME_GETTIMEOFDAY") + SET (H5_HAVE_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_GETTIMEOFDAY") + ENDIF (HAVE_TIME_GETTIMEOFDAY STREQUAL "TRUE") + ENDIF ("H5_HAVE_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_TIME_GETTIMEOFDAY$") + + IF ("H5_HAVE_SYS_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_SYS_TIME_GETTIMEOFDAY$") + TRY_COMPILE (HAVE_SYS_TIME_GETTIMEOFDAY + ${CMAKE_BINARY_DIR} + ${HDF5_RESOURCES_DIR}/GetTimeOfDayTest.cpp + COMPILE_DEFINITIONS -DTRY_SYS_TIME_H + OUTPUT_VARIABLE OUTPUT + ) + IF (HAVE_SYS_TIME_GETTIMEOFDAY STREQUAL "TRUE") + SET (H5_HAVE_SYS_TIME_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_SYS_TIME_GETTIMEOFDAY") + SET (H5_HAVE_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_GETTIMEOFDAY") + ENDIF (HAVE_SYS_TIME_GETTIMEOFDAY STREQUAL "TRUE") + ENDIF ("H5_HAVE_SYS_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_SYS_TIME_GETTIMEOFDAY$") + + IF (NOT HAVE_SYS_TIME_GETTIMEOFDAY AND NOT H5_HAVE_GETTIMEOFDAY) + MESSAGE (STATUS "---------------------------------------------------------------") + MESSAGE (STATUS "Function 'gettimeofday()' was not found. HDF5 will use its") + MESSAGE (STATUS " own implementation.. This can happen on older versions of") + MESSAGE (STATUS " MinGW on Windows. Consider upgrading your MinGW installation") + MESSAGE (STATUS " to a newer version such as MinGW 3.12") + MESSAGE (STATUS "---------------------------------------------------------------") + ENDIF (NOT HAVE_SYS_TIME_GETTIMEOFDAY AND NOT H5_HAVE_GETTIMEOFDAY) +ENDIF (NOT MSVC) + +# Find the library containing clock_gettime() +IF (NOT WINDOWS) + CHECK_FUNCTION_EXISTS(clock_gettime CLOCK_GETTIME_IN_LIBC) + CHECK_LIBRARY_EXISTS(rt clock_gettime "" CLOCK_GETTIME_IN_LIBRT) + CHECK_LIBRARY_EXISTS(posix4 clock_gettime "" CLOCK_GETTIME_IN_LIBPOSIX4) + IF(CLOCK_GETTIME_IN_LIBC) + SET(H5_HAVE_CLOCK_GETTIME 1) + ELSEIF(CLOCK_GETTIME_IN_LIBRT) + SET(H5_HAVE_CLOCK_GETTIME 1) + LIST(APPEND LINK_LIBS rt) + ELSEIF(CLOCK_GETTIME_IN_LIBPOSIX4) + SET(H5_HAVE_CLOCK_GETTIME 1) + LIST(APPEND LINK_LIBS posix4) + ENDIF(CLOCK_GETTIME_IN_LIBC) +ENDIF (NOT WINDOWS) +#----------------------------------------------------------------------------- #----------------------------------------------------------------------------- # Check IF header file exists and add it to the list. @@ -244,43 +352,17 @@ ENDMACRO (CHECK_INCLUDE_FILE_CONCAT) #----------------------------------------------------------------------------- # Check for the existence of certain header files #----------------------------------------------------------------------------- -CHECK_INCLUDE_FILE_CONCAT ("globus/common.h" H5_HAVE_GLOBUS_COMMON_H) -CHECK_INCLUDE_FILE_CONCAT ("io.h" H5_HAVE_IO_H) -CHECK_INCLUDE_FILE_CONCAT ("mfhdf.h" H5_HAVE_MFHDF_H) -CHECK_INCLUDE_FILE_CONCAT ("pdb.h" H5_HAVE_PDB_H) -CHECK_INCLUDE_FILE_CONCAT ("pthread.h" H5_HAVE_PTHREAD_H) -CHECK_INCLUDE_FILE_CONCAT ("setjmp.h" H5_HAVE_SETJMP_H) -CHECK_INCLUDE_FILE_CONCAT ("srbclient.h" H5_HAVE_SRBCLIENT_H) -CHECK_INCLUDE_FILE_CONCAT ("stddef.h" H5_HAVE_STDDEF_H) -CHECK_INCLUDE_FILE_CONCAT ("stdint.h" H5_HAVE_STDINT_H) -CHECK_INCLUDE_FILE_CONCAT ("string.h" H5_HAVE_STRING_H) -CHECK_INCLUDE_FILE_CONCAT ("strings.h" H5_HAVE_STRINGS_H) -CHECK_INCLUDE_FILE_CONCAT ("sys/ioctl.h" H5_HAVE_SYS_IOCTL_H) -CHECK_INCLUDE_FILE_CONCAT ("sys/proc.h" H5_HAVE_SYS_PROC_H) CHECK_INCLUDE_FILE_CONCAT ("sys/resource.h" H5_HAVE_SYS_RESOURCE_H) -CHECK_INCLUDE_FILE_CONCAT ("sys/socket.h" H5_HAVE_SYS_SOCKET_H) -CHECK_INCLUDE_FILE_CONCAT ("sys/stat.h" H5_HAVE_SYS_STAT_H) -IF (CMAKE_SYSTEM_NAME MATCHES "OSF") - CHECK_INCLUDE_FILE_CONCAT ("sys/sysinfo.h" H5_HAVE_SYS_SYSINFO_H) -ELSE (CMAKE_SYSTEM_NAME MATCHES "OSF") - SET (H5_HAVE_SYS_SYSINFO_H "" CACHE INTERNAL "" FORCE) -ENDIF (CMAKE_SYSTEM_NAME MATCHES "OSF") CHECK_INCLUDE_FILE_CONCAT ("sys/time.h" H5_HAVE_SYS_TIME_H) -CHECK_INCLUDE_FILE_CONCAT ("time.h" H5_HAVE_TIME_H) -CHECK_INCLUDE_FILE_CONCAT ("mach/mach_time.h" H5_HAVE_MACH_MACH_TIME_H) -CHECK_INCLUDE_FILE_CONCAT ("sys/timeb.h" H5_HAVE_SYS_TIMEB_H) -CHECK_INCLUDE_FILE_CONCAT ("sys/types.h" H5_HAVE_SYS_TYPES_H) CHECK_INCLUDE_FILE_CONCAT ("unistd.h" H5_HAVE_UNISTD_H) -CHECK_INCLUDE_FILE_CONCAT ("stdlib.h" H5_HAVE_STDLIB_H) -CHECK_INCLUDE_FILE_CONCAT ("memory.h" H5_HAVE_MEMORY_H) -CHECK_INCLUDE_FILE_CONCAT ("dlfcn.h" H5_HAVE_DLFCN_H) +CHECK_INCLUDE_FILE_CONCAT ("sys/ioctl.h" H5_HAVE_SYS_IOCTL_H) +CHECK_INCLUDE_FILE_CONCAT ("sys/stat.h" H5_HAVE_SYS_STAT_H) +CHECK_INCLUDE_FILE_CONCAT ("sys/socket.h" H5_HAVE_SYS_SOCKET_H) +CHECK_INCLUDE_FILE_CONCAT ("sys/types.h" H5_HAVE_SYS_TYPES_H) +CHECK_INCLUDE_FILE_CONCAT ("stddef.h" H5_HAVE_STDDEF_H) +CHECK_INCLUDE_FILE_CONCAT ("setjmp.h" H5_HAVE_SETJMP_H) CHECK_INCLUDE_FILE_CONCAT ("features.h" H5_HAVE_FEATURES_H) -CHECK_INCLUDE_FILE_CONCAT ("inttypes.h" H5_HAVE_INTTYPES_H) -CHECK_INCLUDE_FILE_CONCAT ("netinet/in.h" H5_HAVE_NETINET_IN_H) - -IF (NOT CYGWIN) - CHECK_INCLUDE_FILE_CONCAT ("winsock2.h" H5_HAVE_WINSOCK_H) -ENDIF (NOT CYGWIN) +CHECK_INCLUDE_FILE_CONCAT ("stdint.h" H5_HAVE_STDINT_H) # IF the c compiler found stdint, check the C++ as well. On some systems this # file will be found by C but not C++, only do this test IF the C++ compiler @@ -293,6 +375,37 @@ IF (H5_HAVE_STDINT_H AND CMAKE_CXX_COMPILER_LOADED) ENDIF (NOT H5_HAVE_STDINT_H_CXX) ENDIF (H5_HAVE_STDINT_H AND CMAKE_CXX_COMPILER_LOADED) +# Darwin +CHECK_INCLUDE_FILE_CONCAT ("mach/mach_time.h" H5_HAVE_MACH_MACH_TIME_H) + +# Windows +CHECK_INCLUDE_FILE_CONCAT ("io.h" H5_HAVE_IO_H) +IF (NOT CYGWIN) + CHECK_INCLUDE_FILE_CONCAT ("winsock2.h" H5_HAVE_WINSOCK2_H) +ENDIF (NOT CYGWIN) +CHECK_INCLUDE_FILE_CONCAT ("sys/timeb.h" H5_HAVE_SYS_TIMEB_H) + +IF (CMAKE_SYSTEM_NAME MATCHES "OSF") + CHECK_INCLUDE_FILE_CONCAT ("sys/sysinfo.h" H5_HAVE_SYS_SYSINFO_H) + CHECK_INCLUDE_FILE_CONCAT ("sys/proc.h" H5_HAVE_SYS_PROC_H) +ELSE (CMAKE_SYSTEM_NAME MATCHES "OSF") + SET (H5_HAVE_SYS_SYSINFO_H "" CACHE INTERNAL "" FORCE) + SET (H5_HAVE_SYS_PROC_H "" CACHE INTERNAL "" FORCE) +ENDIF (CMAKE_SYSTEM_NAME MATCHES "OSF") + +CHECK_INCLUDE_FILE_CONCAT ("globus/common.h" H5_HAVE_GLOBUS_COMMON_H) +CHECK_INCLUDE_FILE_CONCAT ("pdb.h" H5_HAVE_PDB_H) +CHECK_INCLUDE_FILE_CONCAT ("pthread.h" H5_HAVE_PTHREAD_H) +CHECK_INCLUDE_FILE_CONCAT ("srbclient.h" H5_HAVE_SRBCLIENT_H) +CHECK_INCLUDE_FILE_CONCAT ("string.h" H5_HAVE_STRING_H) +CHECK_INCLUDE_FILE_CONCAT ("strings.h" H5_HAVE_STRINGS_H) +CHECK_INCLUDE_FILE_CONCAT ("time.h" H5_HAVE_TIME_H) +CHECK_INCLUDE_FILE_CONCAT ("stdlib.h" H5_HAVE_STDLIB_H) +CHECK_INCLUDE_FILE_CONCAT ("memory.h" H5_HAVE_MEMORY_H) +CHECK_INCLUDE_FILE_CONCAT ("dlfcn.h" H5_HAVE_DLFCN_H) +CHECK_INCLUDE_FILE_CONCAT ("inttypes.h" H5_HAVE_INTTYPES_H) +CHECK_INCLUDE_FILE_CONCAT ("netinet/in.h" H5_HAVE_NETINET_IN_H) + #----------------------------------------------------------------------------- # Check for large file support #----------------------------------------------------------------------------- @@ -303,7 +416,13 @@ SET (LINUX_LFS 0) SET (HDF5_EXTRA_FLAGS) IF (NOT WINDOWS) # Linux Specific flags - SET (HDF5_EXTRA_FLAGS -D_POSIX_SOURCE -D_BSD_SOURCE) + # This was originally defined as _POSIX_SOURCE which was updated to + # _POSIX_C_SOURCE=199506L to expose a greater amount of POSIX + # functionality so clock_gettime and CLOCK_MONOTONIC are defined + # correctly. + # POSIX feature information can be found in the gcc manual at: + # http://www.gnu.org/s/libc/manual/html_node/Feature-Test-Macros.html + SET (HDF5_EXTRA_FLAGS -D_POSIX_C_SOURCE=199506L -D_BSD_SOURCE) OPTION (HDF5_ENABLE_LARGE_FILE "Enable support for large (64-bit) files on Linux." ON) IF (HDF5_ENABLE_LARGE_FILE) SET (msg "Performing TEST_LFS_WORKS") @@ -340,6 +459,28 @@ ENDIF (NOT WINDOWS) ADD_DEFINITIONS (${HDF5_EXTRA_FLAGS}) #----------------------------------------------------------------------------- +# Check for HAVE_OFF64_T functionality +#----------------------------------------------------------------------------- +IF (NOT WINDOWS OR MINGW) + HDF5_FUNCTION_TEST (HAVE_OFF64_T) + IF (H5_HAVE_OFF64_T) + CHECK_FUNCTION_EXISTS (lseek64 H5_HAVE_LSEEK64) + CHECK_FUNCTION_EXISTS (fseeko64 H5_HAVE_FSEEKO64) + CHECK_FUNCTION_EXISTS (ftello64 H5_HAVE_FTELLO64) + CHECK_FUNCTION_EXISTS (ftruncate64 H5_HAVE_FTRUNCATE64) + ENDIF (H5_HAVE_OFF64_T) + + CHECK_FUNCTION_EXISTS (fseeko H5_HAVE_FSEEKO) + CHECK_FUNCTION_EXISTS (ftello H5_HAVE_FTELLO) + + HDF5_FUNCTION_TEST (HAVE_STAT64_STRUCT) + IF (HAVE_STAT64_STRUCT) + CHECK_FUNCTION_EXISTS (fstat64 H5_HAVE_FSTAT64) + CHECK_FUNCTION_EXISTS (stat64 H5_HAVE_STAT64) + ENDIF (HAVE_STAT64_STRUCT) +ENDIF (NOT WINDOWS OR MINGW) + +#----------------------------------------------------------------------------- # Check the size in bytes of all the int and float types #----------------------------------------------------------------------------- MACRO (H5_CHECK_TYPE_SIZE type var) @@ -353,7 +494,6 @@ MACRO (H5_CHECK_TYPE_SIZE type var) ENDIF (NOT ${aVar}) ENDMACRO (H5_CHECK_TYPE_SIZE) - H5_CHECK_TYPE_SIZE (char H5_SIZEOF_CHAR) H5_CHECK_TYPE_SIZE (short H5_SIZEOF_SHORT) H5_CHECK_TYPE_SIZE (int H5_SIZEOF_INT) @@ -370,66 +510,106 @@ ENDIF (NOT H5_SIZEOF___INT64) H5_CHECK_TYPE_SIZE (float H5_SIZEOF_FLOAT) H5_CHECK_TYPE_SIZE (double H5_SIZEOF_DOUBLE) H5_CHECK_TYPE_SIZE ("long double" H5_SIZEOF_LONG_DOUBLE) + H5_CHECK_TYPE_SIZE (int8_t H5_SIZEOF_INT8_T) H5_CHECK_TYPE_SIZE (uint8_t H5_SIZEOF_UINT8_T) H5_CHECK_TYPE_SIZE (int_least8_t H5_SIZEOF_INT_LEAST8_T) H5_CHECK_TYPE_SIZE (uint_least8_t H5_SIZEOF_UINT_LEAST8_T) H5_CHECK_TYPE_SIZE (int_fast8_t H5_SIZEOF_INT_FAST8_T) H5_CHECK_TYPE_SIZE (uint_fast8_t H5_SIZEOF_UINT_FAST8_T) + H5_CHECK_TYPE_SIZE (int16_t H5_SIZEOF_INT16_T) H5_CHECK_TYPE_SIZE (uint16_t H5_SIZEOF_UINT16_T) H5_CHECK_TYPE_SIZE (int_least16_t H5_SIZEOF_INT_LEAST16_T) H5_CHECK_TYPE_SIZE (uint_least16_t H5_SIZEOF_UINT_LEAST16_T) H5_CHECK_TYPE_SIZE (int_fast16_t H5_SIZEOF_INT_FAST16_T) H5_CHECK_TYPE_SIZE (uint_fast16_t H5_SIZEOF_UINT_FAST16_T) + H5_CHECK_TYPE_SIZE (int32_t H5_SIZEOF_INT32_T) H5_CHECK_TYPE_SIZE (uint32_t H5_SIZEOF_UINT32_T) H5_CHECK_TYPE_SIZE (int_least32_t H5_SIZEOF_INT_LEAST32_T) H5_CHECK_TYPE_SIZE (uint_least32_t H5_SIZEOF_UINT_LEAST32_T) H5_CHECK_TYPE_SIZE (int_fast32_t H5_SIZEOF_INT_FAST32_T) H5_CHECK_TYPE_SIZE (uint_fast32_t H5_SIZEOF_UINT_FAST32_T) + H5_CHECK_TYPE_SIZE (int64_t H5_SIZEOF_INT64_T) H5_CHECK_TYPE_SIZE (uint64_t H5_SIZEOF_UINT64_T) H5_CHECK_TYPE_SIZE (int_least64_t H5_SIZEOF_INT_LEAST64_T) H5_CHECK_TYPE_SIZE (uint_least64_t H5_SIZEOF_UINT_LEAST64_T) H5_CHECK_TYPE_SIZE (int_fast64_t H5_SIZEOF_INT_FAST64_T) H5_CHECK_TYPE_SIZE (uint_fast64_t H5_SIZEOF_UINT_FAST64_T) + IF (NOT APPLE) H5_CHECK_TYPE_SIZE (size_t H5_SIZEOF_SIZE_T) H5_CHECK_TYPE_SIZE (ssize_t H5_SIZEOF_SSIZE_T) IF (NOT H5_SIZEOF_SSIZE_T) SET (H5_SIZEOF_SSIZE_T 0) ENDIF (NOT H5_SIZEOF_SSIZE_T) + H5_CHECK_TYPE_SIZE (ptrdiff_t H5_SIZEOF_PTRDIFF_T) ENDIF (NOT APPLE) + H5_CHECK_TYPE_SIZE (off_t H5_SIZEOF_OFF_T) H5_CHECK_TYPE_SIZE (off64_t H5_SIZEOF_OFF64_T) IF (NOT H5_SIZEOF_OFF64_T) SET (H5_SIZEOF_OFF64_T 0) ENDIF (NOT H5_SIZEOF_OFF64_T) -# Find the library containing clock_gettime() IF (NOT WINDOWS) - CHECK_FUNCTION_EXISTS(clock_gettime CLOCK_GETTIME_IN_LIBC) - CHECK_LIBRARY_EXISTS(rt clock_gettime "" CLOCK_GETTIME_IN_LIBRT) - CHECK_LIBRARY_EXISTS(posix4 clock_gettime "" CLOCK_GETTIME_IN_LIBPOSIX4) - IF(CLOCK_GETTIME_IN_LIBC) - SET(H5_HAVE_CLOCK_GETTIME 1) - ELSEIF(CLOCK_GETTIME_IN_LIBRT) - SET(H5_HAVE_CLOCK_GETTIME 1) - LIST(APPEND LINK_LIBS rt) - ELSEIF(CLOCK_GETTIME_IN_LIBPOSIX4) - SET(H5_HAVE_CLOCK_GETTIME 1) - LIST(APPEND LINK_LIBS posix4) - ENDIF(CLOCK_GETTIME_IN_LIBC) -ENDIF (NOT WINDOWS) + #----------------------------------------------------------------------------- + # Check if the dev_t type is a scalar type + #----------------------------------------------------------------------------- + HDF5_FUNCTION_TEST (DEV_T_IS_SCALAR) -# For other tests to use the same libraries -SET (CMAKE_REQUIRED_LIBRARIES ${LINK_LIBS}) + # ---------------------------------------------------------------------- + # Check for MONOTONIC_TIMER support (used in clock_gettime). This has + # to be done after any POSIX/BSD defines to ensure that the test gets + # the correct POSIX level on linux. + CHECK_VARIABLE_EXISTS (CLOCK_MONOTONIC HAVE_CLOCK_MONOTONIC) + + #----------------------------------------------------------------------------- + # Check a bunch of time functions + #----------------------------------------------------------------------------- + FOREACH (test + HAVE_TM_GMTOFF + HAVE___TM_GMTOFF +# HAVE_TIMEZONE + HAVE_STRUCT_TIMEZONE + GETTIMEOFDAY_GIVES_TZ + TIME_WITH_SYS_TIME + HAVE_TM_ZONE + HAVE_STRUCT_TM_TM_ZONE + ) + HDF5_FUNCTION_TEST (${test}) + ENDFOREACH (test) + IF (NOT CYGWIN AND NOT MINGW) + HDF5_FUNCTION_TEST (HAVE_TIMEZONE) +# HDF5_FUNCTION_TEST (HAVE_STAT_ST_BLOCKS) + ENDIF (NOT CYGWIN AND NOT MINGW) + + # ---------------------------------------------------------------------- + # Does the struct stat have the st_blocks field? This field is not Posix. + # + HDF5_FUNCTION_TEST (HAVE_STAT_ST_BLOCKS) + + # ---------------------------------------------------------------------- + # How do we figure out the width of a tty in characters? + # + CHECK_FUNCTION_EXISTS (ioctl H5_HAVE_IOCTL) + HDF5_FUNCTION_TEST (HAVE_STRUCT_VIDEOCONFIG) + HDF5_FUNCTION_TEST (HAVE_STRUCT_TEXT_INFO) + CHECK_FUNCTION_EXISTS (_getvideoconfig H5_HAVE__GETVIDEOCONFIG) + CHECK_FUNCTION_EXISTS (gettextinfo H5_HAVE_GETTEXTINFO) + CHECK_FUNCTION_EXISTS (_scrsize H5_HAVE__SCRSIZE) + CHECK_FUNCTION_EXISTS (GetConsoleScreenBufferInfo H5_HAVE_GETCONSOLESCREENBUFFERINFO) + CHECK_SYMBOL_EXISTS (TIOCGWINSZ "sys/ioctl.h" H5_HAVE_TIOCGWINSZ) + CHECK_SYMBOL_EXISTS (TIOCGETD "sys/ioctl.h" H5_HAVE_TIOCGETD) +ENDIF (NOT WINDOWS) #----------------------------------------------------------------------------- # Check for some functions that are used # CHECK_FUNCTION_EXISTS (alarm H5_HAVE_ALARM) +#CHECK_FUNCTION_EXISTS (BSDgettimeofday H5_HAVE_BSDGETTIMEOFDAY) CHECK_FUNCTION_EXISTS (fork H5_HAVE_FORK) CHECK_FUNCTION_EXISTS (frexpf H5_HAVE_FREXPF) CHECK_FUNCTION_EXISTS (frexpl H5_HAVE_FREXPL) @@ -462,18 +642,15 @@ CHECK_FUNCTION_EXISTS (vasprintf H5_HAVE_VASPRINTF) CHECK_FUNCTION_EXISTS (waitpid H5_HAVE_WAITPID) CHECK_FUNCTION_EXISTS (vsnprintf H5_HAVE_VSNPRINTF) -CHECK_FUNCTION_EXISTS (ioctl H5_HAVE_IOCTL) -#CHECK_FUNCTION_EXISTS (gettimeofday H5_HAVE_GETTIMEOFDAY) -CHECK_FUNCTION_EXISTS (difftime H5_HAVE_DIFFTIME) -CHECK_FUNCTION_EXISTS (fseeko H5_HAVE_FSEEKO) -CHECK_FUNCTION_EXISTS (ftello H5_HAVE_FTELLO) -CHECK_FUNCTION_EXISTS (fseeko64 H5_HAVE_FSEEKO64) -CHECK_FUNCTION_EXISTS (ftello64 H5_HAVE_FTELLO64) -CHECK_FUNCTION_EXISTS (fstat64 H5_HAVE_FSTAT64) -CHECK_FUNCTION_EXISTS (stat64 H5_HAVE_STAT64) +IF (NOT WINDOWS) + IF (H5_HAVE_VSNPRINTF) + HDF5_FUNCTION_TEST (VSNPRINTF_WORKS) + ENDIF (H5_HAVE_VSNPRINTF) +ENDIF (NOT WINDOWS) #----------------------------------------------------------------------------- # sigsetjmp is special; may actually be a macro +#----------------------------------------------------------------------------- IF (NOT H5_HAVE_SIGSETJMP) IF (H5_HAVE_SETJMP_H) CHECK_SYMBOL_EXISTS (sigsetjmp "setjmp.h" H5_HAVE_MACRO_SIGSETJMP) @@ -484,71 +661,30 @@ IF (NOT H5_HAVE_SIGSETJMP) ENDIF (NOT H5_HAVE_SIGSETJMP) #----------------------------------------------------------------------------- -# Since gettimeofday is not defined any where standard, lets look in all the -# usual places. On MSVC we are just going to use ::clock() -#----------------------------------------------------------------------------- -IF (NOT MSVC) - IF ("H5_HAVE_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_TIME_GETTIMEOFDAY$") - TRY_COMPILE (HAVE_TIME_GETTIMEOFDAY - ${CMAKE_BINARY_DIR} - ${HDF5_RESOURCES_DIR}/GetTimeOfDayTest.cpp - COMPILE_DEFINITIONS -DTRY_TIME_H - OUTPUT_VARIABLE OUTPUT - ) - IF (HAVE_TIME_GETTIMEOFDAY STREQUAL "TRUE") - SET (H5_HAVE_TIME_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_TIME_GETTIMEOFDAY") - SET (H5_HAVE_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_GETTIMEOFDAY") - ENDIF (HAVE_TIME_GETTIMEOFDAY STREQUAL "TRUE") - ENDIF ("H5_HAVE_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_TIME_GETTIMEOFDAY$") - - IF ("H5_HAVE_SYS_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_SYS_TIME_GETTIMEOFDAY$") - TRY_COMPILE (HAVE_SYS_TIME_GETTIMEOFDAY - ${CMAKE_BINARY_DIR} - ${HDF5_RESOURCES_DIR}/GetTimeOfDayTest.cpp - COMPILE_DEFINITIONS -DTRY_SYS_TIME_H - OUTPUT_VARIABLE OUTPUT - ) - IF (HAVE_SYS_TIME_GETTIMEOFDAY STREQUAL "TRUE") - SET (H5_HAVE_SYS_TIME_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_SYS_TIME_GETTIMEOFDAY") - SET (H5_HAVE_GETTIMEOFDAY "1" CACHE INTERNAL "H5_HAVE_GETTIMEOFDAY") - ENDIF (HAVE_SYS_TIME_GETTIMEOFDAY STREQUAL "TRUE") - ENDIF ("H5_HAVE_SYS_TIME_GETTIMEOFDAY" MATCHES "^H5_HAVE_SYS_TIME_GETTIMEOFDAY$") - - IF (NOT HAVE_SYS_TIME_GETTIMEOFDAY AND NOT H5_HAVE_GETTIMEOFDAY) - MESSAGE (STATUS "---------------------------------------------------------------") - MESSAGE (STATUS "Function 'gettimeofday()' was not found. HDF5 will use its") - MESSAGE (STATUS " own implementation.. This can happen on older versions of") - MESSAGE (STATUS " MinGW on Windows. Consider upgrading your MinGW installation") - MESSAGE (STATUS " to a newer version such as MinGW 3.12") - MESSAGE (STATUS "---------------------------------------------------------------") - ENDIF (NOT HAVE_SYS_TIME_GETTIMEOFDAY AND NOT H5_HAVE_GETTIMEOFDAY) -ENDIF (NOT MSVC) - # Check for Symbols CHECK_SYMBOL_EXISTS (tzname "time.h" H5_HAVE_DECL_TZNAME) #----------------------------------------------------------------------------- -# +# Check a bunch of other functions #----------------------------------------------------------------------------- IF (NOT WINDOWS) - CHECK_SYMBOL_EXISTS (TIOCGWINSZ "sys/ioctl.h" H5_HAVE_TIOCGWINSZ) - CHECK_SYMBOL_EXISTS (TIOCGETD "sys/ioctl.h" H5_HAVE_TIOCGETD) + FOREACH (test + LONE_COLON + HAVE_ATTRIBUTE + HAVE_C99_FUNC + HAVE_FUNCTION + HAVE_C99_DESIGNATED_INITIALIZER + SYSTEM_SCOPE_THREADS + HAVE_SOCKLEN_T + CXX_HAVE_OFFSETOF + ) + HDF5_FUNCTION_TEST (${test}) + ENDFOREACH (test) ENDIF (NOT WINDOWS) -#----------------------------------------------------------------------------- -# Check for the Stream VFD driver -#----------------------------------------------------------------------------- -IF (HDF5_STREAM_VFD) - CHECK_INCLUDE_FILE_CONCAT ("netdb.h" H5_HAVE_NETDB_H) - CHECK_INCLUDE_FILE_CONCAT ("netinet/tcp.h" H5_HAVE_NETINET_TCP_H) - CHECK_INCLUDE_FILE_CONCAT ("sys/filio.h" H5_HAVE_SYS_FILIO_H) - SET (H5_HAVE_STREAM 1) -ENDIF (HDF5_STREAM_VFD) - - -# For other other specific tests, use this MACRO. -MACRO (HDF5_FUNCTION_TEST OTHER_TEST) - IF ("H5_${OTHER_TEST}" MATCHES "^H5_${OTHER_TEST}$") +# For other CXX specific tests, use this MACRO. +MACRO (HDF5_CXX_FUNCTION_TEST OTHER_TEST) + IF ("${OTHER_TEST}" MATCHES "^${OTHER_TEST}$") SET (MACRO_CHECK_FUNCTION_DEFINITIONS "-D${OTHER_TEST} ${CMAKE_REQUIRED_FLAGS}") SET (OTHER_TEST_ADD_LIBRARIES) IF (CMAKE_REQUIRED_LIBRARIES) @@ -579,61 +715,87 @@ MACRO (HDF5_FUNCTION_TEST OTHER_TEST) #MESSAGE (STATUS "Performing ${OTHER_TEST}") TRY_COMPILE (${OTHER_TEST} ${CMAKE_BINARY_DIR} - ${HDF5_RESOURCES_DIR}/HDF5Tests.c + ${HDF5_RESOURCES_DIR}/HDF5CXXTests.cpp CMAKE_FLAGS -DCOMPILE_DEFINITIONS:STRING=${MACRO_CHECK_FUNCTION_DEFINITIONS} "${OTHER_TEST_ADD_LIBRARIES}" OUTPUT_VARIABLE OUTPUT ) - IF (${OTHER_TEST}) - SET (H5_${OTHER_TEST} 1 CACHE INTERNAL "Other test ${FUNCTION}") - MESSAGE (STATUS "Performing Other Test ${OTHER_TEST} - Success") - ELSE (${OTHER_TEST}) - MESSAGE (STATUS "Performing Other Test ${OTHER_TEST} - Failed") - SET (H5_${OTHER_TEST} "" CACHE INTERNAL "Other test ${FUNCTION}") + IF ("${OTHER_TEST}" EQUAL 0) + SET (${OTHER_TEST} 1 CACHE INTERNAL "CXX test ${FUNCTION}") + MESSAGE (STATUS "Performing CXX Test ${OTHER_TEST} - Success") + ELSE ("${OTHER_TEST}" EQUAL 0) + MESSAGE (STATUS "Performing CXX Test ${OTHER_TEST} - Failed") + SET (${OTHER_TEST} "" CACHE INTERNAL "CXX test ${FUNCTION}") FILE (APPEND ${CMAKE_BINARY_DIR}/CMakeFiles/CMakeError.log - "Performing Other Test ${OTHER_TEST} failed with the following output:\n" + "Performing CXX Test ${OTHER_TEST} failed with the following output:\n" "${OUTPUT}\n" ) - ENDIF (${OTHER_TEST}) - ENDIF ("H5_${OTHER_TEST}" MATCHES "^H5_${OTHER_TEST}$") -ENDMACRO (HDF5_FUNCTION_TEST) + ENDIF ("${OTHER_TEST}" EQUAL 0) + ENDIF ("${OTHER_TEST}" MATCHES "^${OTHER_TEST}$") +ENDMACRO (HDF5_CXX_FUNCTION_TEST) #----------------------------------------------------------------------------- -# Check a bunch of other functions +# Check a bunch of cxx functions #----------------------------------------------------------------------------- -IF (NOT WINDOWS) +IF (CMAKE_CXX_COMPILER_LOADED) FOREACH (test - TIME_WITH_SYS_TIME - STDC_HEADERS - HAVE_TM_ZONE - HAVE_STRUCT_TM_TM_ZONE - HAVE_ATTRIBUTE - HAVE_FUNCTION - HAVE_TM_GMTOFF -# HAVE_TIMEZONE - HAVE_STRUCT_TIMEZONE - HAVE_STAT_ST_BLOCKS - HAVE_FUNCTION - SYSTEM_SCOPE_THREADS - HAVE_SOCKLEN_T - DEV_T_IS_SCALAR - HAVE_OFF64_T - GETTIMEOFDAY_GIVES_TZ - VSNPRINTF_WORKS - HAVE_C99_FUNC - HAVE_C99_DESIGNATED_INITIALIZER - CXX_HAVE_OFFSETOF - LONE_COLON + OLD_HEADER_FILENAME + H5_NO_NAMESPACE + H5_NO_STD + BOOL_NOTDEFINED + NO_STATIC_CAST ) - HDF5_FUNCTION_TEST (${test}) + HDF5_CXX_FUNCTION_TEST (${test}) ENDFOREACH (test) - IF (NOT CYGWIN AND NOT MINGW) - HDF5_FUNCTION_TEST (HAVE_TIMEZONE) -# HDF5_FUNCTION_TEST (HAVE_STAT_ST_BLOCKS) - ENDIF (NOT CYGWIN AND NOT MINGW) +ENDIF (CMAKE_CXX_COMPILER_LOADED) + +#----------------------------------------------------------------------------- +# Check if Direct I/O driver works +#----------------------------------------------------------------------------- +IF (NOT WINDOWS) + OPTION (HDF5_ENABLE_DIRECT_VFD "Build the Direct I/O Virtual File Driver" ON) + IF (HDF5_ENABLE_DIRECT_VFD) + SET (msg "Performing TEST_DIRECT_VFD_WORKS") + SET (MACRO_CHECK_FUNCTION_DEFINITIONS "-DTEST_DIRECT_VFD_WORKS -D_GNU_SOURCE ${CMAKE_REQUIRED_FLAGS}") + TRY_RUN (TEST_DIRECT_VFD_WORKS_RUN TEST_DIRECT_VFD_WORKS_COMPILE + ${HDF5_BINARY_DIR}/CMake + ${HDF5_RESOURCES_DIR}/HDF5Tests.c + CMAKE_FLAGS -DCOMPILE_DEFINITIONS:STRING=${MACRO_CHECK_FUNCTION_DEFINITIONS} + OUTPUT_VARIABLE OUTPUT + ) + IF (TEST_DIRECT_VFD_WORKS_COMPILE) + IF (TEST_DIRECT_VFD_WORKS_RUN MATCHES 0) + HDF5_FUNCTION_TEST (HAVE_DIRECT) + SET (CMAKE_REQUIRED_DEFINITIONS "${CMAKE_REQUIRED_DEFINITIONS} -D_GNU_SOURCE") + ADD_DEFINITIONS ("-D_GNU_SOURCE") + ELSE (TEST_DIRECT_VFD_WORKS_RUN MATCHES 0) + SET (TEST_DIRECT_VFD_WORKS "" CACHE INTERNAL ${msg}) + MESSAGE (STATUS "${msg}... no") + FILE (APPEND ${CMAKE_BINARY_DIR}/CMakeFiles/CMakeError.log + "Test TEST_DIRECT_VFD_WORKS Run failed with the following output and exit code:\n ${OUTPUT}\n" + ) + ENDIF (TEST_DIRECT_VFD_WORKS_RUN MATCHES 0) + ELSE (TEST_DIRECT_VFD_WORKS_COMPILE ) + SET (TEST_DIRECT_VFD_WORKS "" CACHE INTERNAL ${msg}) + MESSAGE (STATUS "${msg}... no") + FILE (APPEND ${CMAKE_BINARY_DIR}/CMakeFiles/CMakeError.log + "Test TEST_DIRECT_VFD_WORKS Compile failed with the following output:\n ${OUTPUT}\n" + ) + ENDIF (TEST_DIRECT_VFD_WORKS_COMPILE) + ENDIF (HDF5_ENABLE_DIRECT_VFD) ENDIF (NOT WINDOWS) #----------------------------------------------------------------------------- +# Check for the Stream VFD driver +#----------------------------------------------------------------------------- +IF (HDF5_STREAM_VFD) + CHECK_INCLUDE_FILE_CONCAT ("netdb.h" H5_HAVE_NETDB_H) + CHECK_INCLUDE_FILE_CONCAT ("netinet/tcp.h" H5_HAVE_NETINET_TCP_H) + CHECK_INCLUDE_FILE_CONCAT ("sys/filio.h" H5_HAVE_SYS_FILIO_H) + SET (H5_HAVE_STREAM 1) +ENDIF (HDF5_STREAM_VFD) + +#----------------------------------------------------------------------------- # Check if InitOnceExecuteOnce is available #----------------------------------------------------------------------------- IF (WINDOWS) @@ -697,7 +859,6 @@ IF (WINDOWS) ENDIF("${H5_HAVE_IOEO}" MATCHES "^${H5_HAVE_IOEO}$") ENDIF (NOT HDF5_NO_IOEO_TEST) ENDIF (WINDOWS) - #----------------------------------------------------------------------------- # Option to see if GPFS is available on this filesystem --enable-gpfs @@ -712,13 +873,6 @@ ENDIF (HDF5_ENABLE_GPFS) MARK_AS_ADVANCED (HDF5_ENABLE_GPFS) #----------------------------------------------------------------------------- -# Look for 64 bit file stream capability -#----------------------------------------------------------------------------- -IF (HAVE_OFF64_T) - CHECK_FUNCTION_EXISTS (lseek64 H5_HAVE_LSEEK64) -ENDIF (HAVE_OFF64_T) - -#----------------------------------------------------------------------------- # Determine how 'inline' is used #----------------------------------------------------------------------------- SET (HDF5_EXTRA_TEST_DEFINITIONS INLINE_TEST_INLINE) @@ -949,6 +1103,31 @@ H5ConversionTests (H5_ULLONG_TO_LDOUBLE_PRECISION "Checking IF converting unsign # H5ConversionTests (H5_FP_TO_INTEGER_OVERFLOW_WORKS "Checking IF overflows normally converting floating-point to integer values") # ---------------------------------------------------------------------- +# Set the flag to indicate that the machine is using a special algorithm to convert +# 'long double' to '(unsigned) long' values. (This flag should only be set for +# the IBM Power6 Linux. When the bit sequence of long double is +# 0x4351ccf385ebc8a0bfcc2a3c3d855620, the converted value of (unsigned)long +# is 0x004733ce17af227f, not the same as the library's conversion to 0x004733ce17af2282. +# The machine's conversion gets the correct value. We define the macro and disable +# this kind of test until we figure out what algorithm they use. +# +IF (H5_LDOUBLE_TO_LONG_SPECIAL MATCHES ^H5_LDOUBLE_TO_LONG_SPECIAL$) + SET (H5_LDOUBLE_TO_LONG_SPECIAL 0 CACHE INTERNAL "Define if your system converts long double to (unsigned) long values with special algorithm") + MESSAGE (STATUS "Checking IF your system converts long double to (unsigned) long values with special algorithm... no") +ENDIF (H5_LDOUBLE_TO_LONG_SPECIAL MATCHES ^H5_LDOUBLE_TO_LONG_SPECIAL$) +# ---------------------------------------------------------------------- +# Set the flag to indicate that the machine is using a special algorithm +# to convert some values of '(unsigned) long' to 'long double' values. +# (This flag should be off for all machines, except for IBM Power6 Linux, +# when the bit sequences are 003fff..., 007fff..., 00ffff..., 01ffff..., +# ..., 7fffff..., the compiler uses a unknown algorithm. We define a +# macro and skip the test for now until we know about the algorithm. +# +IF (H5_LONG_TO_LDOUBLE_SPECIAL MATCHES ^H5_LONG_TO_LDOUBLE_SPECIAL$) + SET (H5_LONG_TO_LDOUBLE_SPECIAL 0 CACHE INTERNAL "Define if your system can convert (unsigned) long to long double values with special algorithm") + MESSAGE (STATUS "Checking IF your system can convert (unsigned) long to long double values with special algorithm... no") +ENDIF (H5_LONG_TO_LDOUBLE_SPECIAL MATCHES ^H5_LONG_TO_LDOUBLE_SPECIAL$) +# ---------------------------------------------------------------------- # Set the flag to indicate that the machine can accurately convert # 'long double' to '(unsigned) long long' values. (This flag should be set for # all machines, except for Mac OS 10.4 and SGI IRIX64 6.5. When the bit sequence @@ -966,10 +1145,38 @@ H5ConversionTests (H5_LDOUBLE_TO_LLONG_ACCURATE "Checking IF correctly convertin # as big as they should be. # H5ConversionTests (H5_LLONG_TO_LDOUBLE_CORRECT "Checking IF correctly converting (unsigned) long long to long double values") +# ---------------------------------------------------------------------- +# Set the flag to indicate that the machine generates bad code +# for the H5V_log2_gen() routine in src/H5Vprivate.h +# (This flag should be set to no for all machines, except for SGI IRIX64, +# where the cache value is set to yes in it's config file) +# +IF (H5_BAD_LOG2_CODE_GENERATED MATCHES ^H5_BAD_LOG2_CODE_GENERATED$) + SET (H5_BAD_LOG2_CODE_GENERATED 0 CACHE INTERNAL "Define if your system generates wrong code for log2 routine") + MESSAGE (STATUS "Checking IF your system generates wrong code for log2 routine... no") +ENDIF (H5_BAD_LOG2_CODE_GENERATED MATCHES ^H5_BAD_LOG2_CODE_GENERATED$) +# ---------------------------------------------------------------------- +# Check if pointer alignments are enforced +# H5ConversionTests (H5_NO_ALIGNMENT_RESTRICTIONS "Checking IF alignment restrictions are strictly enforced") # Define a macro for Cygwin (on XP only) where the compiler has rounding # problem converting from unsigned long long to long double */ IF (CYGWIN) SET (H5_CYGWIN_ULLONG_TO_LDOUBLE_ROUND_PROBLEM 1) -ENDIF (CYGWIN) \ No newline at end of file +ENDIF (CYGWIN) + +# ----------------------------------------------------------------------- +# wrapper script variables +# +SET (prefix ${CMAKE_INSTALL_PREFIX}) +SET (exec_prefix "\${prefix}") +SET (libdir "${exec_prefix}/lib") +SET (includedir "\${prefix}/include") +SET (host_os ${CMAKE_HOST_SYSTEM_NAME}) +SET (CC ${CMAKE_C_COMPILER}) +SET (CXX ${CMAKE_CXX_COMPILER}) +SET (FC ${CMAKE_Fortran_COMPILER}) +FOREACH (LINK_LIB ${LINK_LIBS}) + SET (LIBS "${LIBS} -l${LINK_LIB}") +ENDFOREACH (LINK_LIB ${LINK_LIBS}) diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in index 80406a3..6fca1ae 100644 --- a/config/cmake/H5pubconf.h.in +++ b/config/cmake/H5pubconf.h.in @@ -260,6 +260,9 @@ /* Define to 1 if you have the `sz' library (-lsz). */ #cmakedefine H5_HAVE_LIBSZ @H5_HAVE_LIBSZ@ +/* Define to 1 if you have the `ws2_32' library (-lws2_32). */ +#cmakedefine H5_HAVE_LIBWS2_32 @H5_HAVE_LIBWS2_32@ + /* Define to 1 if you have the `z' library (-lz). */ #cmakedefine H5_HAVE_LIBZ @H5_HAVE_LIBZ@ @@ -461,7 +464,7 @@ #cmakedefine H5_HAVE_WINDOW_PATH @H5_HAVE_WINDOW_PATH@ /* Define to 1 if you have the header file. */ -#cmakedefine H5_HAVE_WINSOCK_H @H5_HAVE_WINSOCK_H@ +#cmakedefine H5_HAVE_WINSOCK2_H @H5_HAVE_WINSOCK2_H@ /* Define to 1 if you have the header file. */ #cmakedefine H5_HAVE_ZLIB_H @H5_HAVE_ZLIB_H@ diff --git a/config/cmake/HDF5CXXTests.cpp b/config/cmake/HDF5CXXTests.cpp new file mode 100644 index 0000000..7003cc8 --- /dev/null +++ b/config/cmake/HDF5CXXTests.cpp @@ -0,0 +1,56 @@ + +#ifdef OLD_HEADER_FILENAME + +#include + +int main(void) { return 0; } + +#endif + + +#ifdef H5_NO_NAMESPACE + +namespace H5 { +int fnord; +} + +int main(void) { + using namespace H5; + fnord = 37; + return 0; +} + +#endif + +#ifdef H5_NO_STD + +#include + +using namespace std; + +int main(void) { + string myString("testing namespace std"); + return 0; +} + +#endif + +#ifdef BOOL_NOTDEFINED +int main(void) { + bool flag; + return 0; +} + +#endif + +#ifdef NO_STATIC_CAST + +int main(void) { + float test_float; + int test_int; + test_float = 37.0; + test_int = static_cast (test_float); + return 0; +} + +#endif diff --git a/config/cmake/HDF5Tests.c b/config/cmake/HDF5Tests.c index 79741a8..2f69ec8 100644 --- a/config/cmake/HDF5Tests.c +++ b/config/cmake/HDF5Tests.c @@ -1,38 +1,5 @@ #define SIMPLE_TEST(x) int main(){ x; return 0; } -#ifdef CXX_HAVE_OFFSETOF - #include -#include - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus -extern "C" -# endif -int FC_DUMMY_MAIN() -{ return 1;} -#endif -#endif -int -main () -{ - - struct index_st - { - unsigned char type; - unsigned char num; - unsigned int len; - }; - typedef struct index_st index_t; - int x,y; - x = offsetof(struct index_st, len); - y = offsetof(index_t, num) - - ; - return 0; -} -#endif - #ifdef HAVE_C99_DESIGNATED_INITIALIZER #ifdef FC_DUMMY_MAIN @@ -106,7 +73,7 @@ int test_vsnprintf(const char *fmt,...) int main(void) { - exit(test_vsnprintf("%s","A string that is longer than 16 characters")); + return(test_vsnprintf("%s","A string that is longer than 16 characters")); } #endif @@ -215,6 +182,16 @@ SIMPLE_TEST(struct tm tm; tm.tm_gmtoff=0); #endif /* HAVE_TM_GMTOFF */ +#ifdef HAVE___TM_GMTOFF + +#ifdef HAVE_SYS_TIME_H +#include +#endif +#include +SIMPLE_TEST(struct tm tm; tm.__tm_gmtoff=0); + +#endif /* HAVE_TM_GMTOFF */ + #ifdef HAVE_TIMEZONE #ifdef HAVE_SYS_TIME_H @@ -269,10 +246,10 @@ int main(void) if (strcmp(s, "1099511627776") == 0) { printf("PRINTF_LL_WIDTH=[%s]\n", *currentArg); - exit(0); + return 0; } } - exit(1); + return 1; } #endif /* PRINTF_LL_WIDTH */ @@ -288,7 +265,9 @@ int main(void) pthread_attr_init(&attribute); ret=pthread_attr_setscope(&attribute, PTHREAD_SCOPE_SYSTEM); - exit(ret==0 ? 0 : 1); + if (ret==0) + return 0; + return 1; } #endif /* SYSTEM_SCOPE_THREADS */ @@ -336,6 +315,35 @@ int main() } #endif +#ifdef HAVE_STAT64_STRUCT +#include +#include ], +struct stat64 sb; +int main() +{ + return 0; +} +#endif + +#ifdef TEST_DIRECT_VFD_WORKS +#include +#include +#include +int main(void) +{ + int fid; + if((fid=open("tst_file", O_CREAT | O_TRUNC | O_DIRECT, 0755))<0) + return 1; + close(fid); + remove("tst_file"); + return 0; +} +#endif + +#ifdef HAVE_DIRECT + SIMPLE_TEST(posix_memalign()); +#endif + #ifdef TEST_LFS_WORKS /* Return 0 when LFS is available and 1 otherwise. */ #define _LARGEFILE_SOURCE @@ -354,7 +362,7 @@ int main(int argc, char **argv) if (OFF_T_64 % 2147483647 != 1) return 1; - // stat breaks on SCO OpenServer + /* stat breaks on SCO OpenServer */ struct stat buf; stat( argv[0], &buf ); if (!S_ISREG(buf.st_mode)) @@ -382,8 +390,8 @@ int main(void) gettimeofday(&tv, &tz); /* Check whether the function returned any value at all */ if(tz.tz_minuteswest == 7777 && tz.tz_dsttime == 7) - exit(1); - else exit (0); + return 1; + else return 0; } #endif @@ -394,6 +402,41 @@ int main(int argc, char * argv) } #endif +#ifdef CXX_HAVE_OFFSETOF + +#include +#include + +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus +extern "C" +# endif +int FC_DUMMY_MAIN() +{ return 1;} +#endif +#endif +int +main () +{ + + struct index_st + { + unsigned char type; + unsigned char num; + unsigned int len; + }; + typedef struct index_st index_t; + int x,y; + x = offsetof(struct index_st, len); + y = offsetof(index_t, num) + + ; + return 0; +} + +#endif + #ifdef HAVE_GPFS #include @@ -423,6 +466,18 @@ int main () #endif /* HAVE_IOEO */ +#ifdef HAVE_STRUCT_VIDEOCONFIG + +SIMPLE_TEST(struct videoconfig w; w.numtextcols=0); + +#endif /* HAVE_TM_GMTOFF */ + +#ifdef HAVE_STRUCT_TEXT_INFO + +SIMPLE_TEST(struct text_info w; w.screenwidth=0); + +#endif /* HAVE_TM_GMTOFF */ + #if defined( INLINE_TEST_inline ) || defined( INLINE_TEST___inline__ ) || defined( INLINE_TEST___inline ) #ifndef __cplusplus diff --git a/config/cmake/HDF5UseFortran.cmake b/config/cmake/HDF5UseFortran.cmake index c1c5acb..323c9ef 100644 --- a/config/cmake/HDF5UseFortran.cmake +++ b/config/cmake/HDF5UseFortran.cmake @@ -114,6 +114,11 @@ CHECK_FORTRAN_FEATURE(iso_c_binding " PROGRAM main USE iso_c_binding + IMPLICIT NONE + TYPE(C_PTR) :: ptr + TYPE(C_FUNPTR) :: funptr + CHARACTER(LEN=80, KIND=c_char), TARGET :: ichr + ptr = C_LOC(ichr(1:1)) END PROGRAM " FORTRAN_HAVE_ISO_C_BINDING diff --git a/config/cmake/HDFLibMacros.cmake b/config/cmake/HDFLibMacros.cmake index b9c1fbb..7b54c95 100644 --- a/config/cmake/HDFLibMacros.cmake +++ b/config/cmake/HDFLibMacros.cmake @@ -59,8 +59,8 @@ MACRO (EXTERNAL_JPEG_LIBRARY compress_type libtype jpeg_pic) ) ELSE (MINGW) SET_TARGET_PROPERTIES(jpeg PROPERTIES - IMPORTED_IMPLIB "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${JPEG_LIB_NAME}${CMAKE_IMPORT_LIBRARY_SUFFIX}" - IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${JPEG_LIB_NAME}${CMAKE_SHARED_LIBRARY_SUFFIX}" + IMPORTED_IMPLIB "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${JPEG_LIB_NAME}${CMAKE_IMPORT_LIBRARY_SUFFIX}" + IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${JPEG_LIB_NAME}${CMAKE_SHARED_LIBRARY_SUFFIX}" ) ENDIF (MINGW) ELSE (WIN32) @@ -80,7 +80,7 @@ MACRO (EXTERNAL_JPEG_LIBRARY compress_type libtype jpeg_pic) ELSE (${libtype} MATCHES "SHARED") IF (WIN32 AND NOT MINGW) SET_TARGET_PROPERTIES(jpeg PROPERTIES - IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/lib${JPEG_LIB_NAME}${CMAKE_STATIC_LIBRARY_SUFFIX}" + IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/lib${JPEG_LIB_NAME}${CMAKE_STATIC_LIBRARY_SUFFIX}" IMPORTED_LINK_INTERFACE_LANGUAGES "C" ) ELSE (WIN32 AND NOT MINGW) @@ -173,8 +173,8 @@ MACRO (EXTERNAL_SZIP_LIBRARY compress_type libtype encoding) ) ELSE (MINGW) SET_TARGET_PROPERTIES(szip PROPERTIES - IMPORTED_IMPLIB "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${SZIP_LIB_NAME}${CMAKE_IMPORT_LIBRARY_SUFFIX}" - IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${SZIP_LIB_NAME}${CMAKE_SHARED_LIBRARY_SUFFIX}" + IMPORTED_IMPLIB "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${SZIP_LIB_NAME}${CMAKE_IMPORT_LIBRARY_SUFFIX}" + IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${SZIP_LIB_NAME}${CMAKE_SHARED_LIBRARY_SUFFIX}" ) ENDIF (MINGW) ELSE (WIN32) @@ -194,7 +194,7 @@ MACRO (EXTERNAL_SZIP_LIBRARY compress_type libtype encoding) ELSE (${libtype} MATCHES "SHARED") IF (WIN32 AND NOT MINGW) SET_TARGET_PROPERTIES(szip PROPERTIES - IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/lib${SZIP_LIB_NAME}${CMAKE_STATIC_LIBRARY_SUFFIX}" + IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/lib${SZIP_LIB_NAME}${CMAKE_STATIC_LIBRARY_SUFFIX}" IMPORTED_LINK_INTERFACE_LANGUAGES "C" ) ELSE (WIN32 AND NOT MINGW) @@ -289,8 +289,8 @@ MACRO (EXTERNAL_ZLIB_LIBRARY compress_type libtype) ) ELSE (MINGW) SET_TARGET_PROPERTIES(zlib PROPERTIES - IMPORTED_IMPLIB "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${ZLIB_LIB_NAME}${CMAKE_IMPORT_LIBRARY_SUFFIX}" - IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${ZLIB_LIB_NAME}${CMAKE_SHARED_LIBRARY_SUFFIX}" + IMPORTED_IMPLIB "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${ZLIB_LIB_NAME}${CMAKE_IMPORT_LIBRARY_SUFFIX}" + IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${ZLIB_LIB_NAME}${CMAKE_SHARED_LIBRARY_SUFFIX}" ) ENDIF (MINGW) ELSE (WIN32) @@ -310,7 +310,7 @@ MACRO (EXTERNAL_ZLIB_LIBRARY compress_type libtype) ELSE (${libtype} MATCHES "SHARED") IF (WIN32 AND NOT MINGW) SET_TARGET_PROPERTIES(zlib PROPERTIES - IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${BLDTYPE}/lib${ZLIB_LIB_NAME}${CMAKE_STATIC_LIBRARY_SUFFIX}" + IMPORTED_LOCATION "${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/lib${ZLIB_LIB_NAME}${CMAKE_STATIC_LIBRARY_SUFFIX}" IMPORTED_LINK_INTERFACE_LANGUAGES "C" ) ELSE (WIN32 AND NOT MINGW) diff --git a/config/cmake/HDFMacros.cmake b/config/cmake/HDFMacros.cmake index 0d3ab5f..568b3ff 100644 --- a/config/cmake/HDFMacros.cmake +++ b/config/cmake/HDFMacros.cmake @@ -43,6 +43,37 @@ MACRO (TARGET_NAMING target libtype) ENDMACRO (TARGET_NAMING) #------------------------------------------------------------------------------- +MACRO (INSTALL_TARGET_PDB target targetdestination targetcomponent) + IF (WIN32 AND MSVC) + GET_TARGET_PROPERTY (target_name ${target} RELWITHDEBINFO_OUTPUT_NAME) + INSTALL ( + FILES + ${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${CMAKE_IMPORT_LIBRARY_PREFIX}${target_name}.pdb + DESTINATION + ${targetdestination} + CONFIGURATIONS RelWithDebInfo + COMPONENT ${targetcomponent} + ) + ENDIF (WIN32 AND MSVC) +ENDMACRO (INSTALL_TARGET_PDB) + +#------------------------------------------------------------------------------- +MACRO (INSTALL_PROGRAM_PDB target targetdestination targetcomponent) + IF (WIN32 AND MSVC) + GET_TARGET_PROPERTY (target_name ${target} RELWITHDEBINFO_OUTPUT_NAME) + GET_TARGET_PROPERTY (target_prefix h5dump PREFIX) + INSTALL ( + FILES + ${CMAKE_LIBRARY_OUTPUT_DIRECTORY}/${CMAKE_BUILD_TYPE}/${target_prefix}${target_name}.pdb + DESTINATION + ${targetdestination} + CONFIGURATIONS RelWithDebInfo + COMPONENT ${targetcomponent} + ) + ENDIF (WIN32 AND MSVC) +ENDMACRO (INSTALL_PROGRAM_PDB) + +#------------------------------------------------------------------------------- MACRO (HDF_SET_LIB_OPTIONS libtarget libname libtype) # message (STATUS "${libname} libtype: ${libtype}") IF (${libtype} MATCHES "SHARED") diff --git a/config/cmake/cacheinit.cmake b/config/cmake/cacheinit.cmake index 1ab3432..e7dd19f 100755 --- a/config/cmake/cacheinit.cmake +++ b/config/cmake/cacheinit.cmake @@ -20,6 +20,8 @@ SET (HDF5_BUILD_HL_LIB ON CACHE BOOL "Build HIGH Level HDF5 Library" FORCE) SET (HDF5_BUILD_TOOLS ON CACHE BOOL "Build HDF5 Tools" FORCE) +SET (HDF5_BUILD_GENERATORS OFF CACHE BOOL "Build Test Generators" FORCE) + SET (HDF5_ENABLE_Z_LIB_SUPPORT ON CACHE BOOL "Enable Zlib Filters" FORCE) SET (HDF5_ENABLE_SZIP_SUPPORT ON CACHE BOOL "Use SZip Filter" FORCE) @@ -28,12 +30,18 @@ SET (HDF5_ENABLE_SZIP_ENCODING ON CACHE BOOL "Use SZip Encoding" FORCE) SET (HDF5_ENABLE_HSIZET ON CACHE BOOL "Enable datasets larger than memory" FORCE) +SET (HDF5_ENABLE_UNSUPPORTED OFF CACHE BOOL "Enable unsupported combinations of configuration options" FORCE) + SET (HDF5_ENABLE_DEPRECATED_SYMBOLS ON CACHE BOOL "Enable deprecated public API symbols" FORCE) +SET (HDF5_ENABLE_DIRECT_VFD OFF CACHE BOOL "Build the Direct I/O Virtual File Driver" FORCE) + SET (HDF5_ENABLE_PARALLEL OFF CACHE BOOL "Enable parallel build (requires MPI)" FORCE) SET (MPIEXEC_MAX_NUMPROCS "3" CACHE STRING "Minimum number of processes for HDF parallel tests" FORCE) +SET (HDF5_BUILD_PARALLEL_ALL OFF CACHE BOOL "Build Parallel Programs" FORCE) + SET (HDF5_ENABLE_COVERAGE OFF CACHE BOOL "Enable code coverage for Libraries and Programs" FORCE) SET (HDF5_ENABLE_USING_MEMCHECKER OFF CACHE BOOL "Indicate that a memory checker is used" FORCE) diff --git a/config/cmake/grepTest.cmake b/config/cmake/grepTest.cmake index 9b5148c..365d9c3 100644 --- a/config/cmake/grepTest.cmake +++ b/config/cmake/grepTest.cmake @@ -43,18 +43,21 @@ MESSAGE (STATUS "COMMAND Error: ${TEST_ERROR}") # now grep the output with the reference FILE (READ ${TEST_FOLDER}/${TEST_OUTPUT} TEST_STREAM) +# TEST_REFERENCE should always be matched +STRING(REGEX MATCH "${TEST_REFERENCE}" TEST_MATCH ${TEST_STREAM}) +STRING(COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT) +IF (${TEST_RESULT} STREQUAL "0") + MESSAGE (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") +ENDIF (${TEST_RESULT} STREQUAL "0") + STRING(REGEX MATCH "${TEST_FILTER}" TEST_MATCH ${TEST_STREAM}) -IF (${TEST_EXPECT}) +IF (${TEST_EXPECT} STREQUAL "1") + # TEST_EXPECT (1) interperts TEST_FILTER as NOT to match STRING(LENGTH "${TEST_MATCH}" TEST_RESULT) IF (NOT ${TEST_RESULT} STREQUAL "0") - MESSAGE (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_REFERENCE}") + MESSAGE (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did contain ${TEST_FILTER}") ENDIF (NOT ${TEST_RESULT} STREQUAL "0") -ELSE (${TEST_EXPECT}) - STRING(COMPARE EQUAL "${TEST_REFERENCE}" "${TEST_MATCH}" TEST_RESULT) - IF (${TEST_RESULT} STREQUAL "0") - MESSAGE (FATAL_ERROR "Failed: The output of ${TEST_PROGRAM} did not contain ${TEST_REFERENCE}") - ENDIF (${TEST_RESULT} STREQUAL "0") -ENDIF (${TEST_EXPECT}) +ENDIF (${TEST_EXPECT} STREQUAL "0") # everything went fine... MESSAGE ("Passed: The output of ${TEST_PROGRAM} matched") diff --git a/config/cmake/hdf5-config.cmake.install.in b/config/cmake/hdf5-config.cmake.install.in index 268d5ed..a851915 100644 --- a/config/cmake/hdf5-config.cmake.install.in +++ b/config/cmake/hdf5-config.cmake.install.in @@ -43,8 +43,8 @@ IF (HDF5_BUILD_HL_LIB AND HDF5_BUILD_CPP_LIB) ENDIF (HDF5_BUILD_HL_LIB AND HDF5_BUILD_CPP_LIB) IF (HDF5_BUILD_TOOLS) - SET (HDF5_INCLUDE_DIR_TOOLS "${_IMPORT_PREFIX}/include/tools" ) - SET (HDF5_TOOLS_DIR "${_IMPORT_PREFIX}/bin/tools" ) + SET (HDF5_INCLUDE_DIR_TOOLS "${_IMPORT_PREFIX}/include" ) + SET (HDF5_TOOLS_DIR "${_IMPORT_PREFIX}/bin" ) ENDIF (HDF5_BUILD_TOOLS) #----------------------------------------------------------------------------- diff --git a/config/cmake/mccacheinit.cmake b/config/cmake/mccacheinit.cmake index 10b2824..b472acf 100755 --- a/config/cmake/mccacheinit.cmake +++ b/config/cmake/mccacheinit.cmake @@ -14,10 +14,14 @@ SET (HDF5_BUILD_EXAMPLES ON CACHE BOOL "Build HDF5 Library Examples" FORCE) SET (HDF5_BUILD_FORTRAN ON CACHE BOOL "Build FORTRAN support" FORCE) +SET (HDF5_ENABLE_F2003 OFF CACHE BOOL "Enable FORTRAN 2003 Standard" FORCE) + SET (HDF5_BUILD_HL_LIB ON CACHE BOOL "Build HIGH Level HDF5 Library" FORCE) SET (HDF5_BUILD_TOOLS ON CACHE BOOL "Build HDF5 Tools" FORCE) +SET (HDF5_BUILD_GENERATORS OFF CACHE BOOL "Build Test Generators" FORCE) + SET (HDF5_ENABLE_Z_LIB_SUPPORT ON CACHE BOOL "Enable Zlib Filters" FORCE) SET (HDF5_ENABLE_SZIP_SUPPORT ON CACHE BOOL "Use SZip Filter" FORCE) @@ -26,22 +30,36 @@ SET (HDF5_ENABLE_SZIP_ENCODING ON CACHE BOOL "Use SZip Encoding" FORCE) SET (HDF5_ENABLE_HSIZET ON CACHE BOOL "Enable datasets larger than memory" FORCE) +SET (HDF5_ENABLE_UNSUPPORTED OFF CACHE BOOL "Enable unsupported combinations of configuration options" FORCE) + SET (HDF5_ENABLE_DEPRECATED_SYMBOLS ON CACHE BOOL "Enable deprecated public API symbols" FORCE) +SET (HDF5_ENABLE_DIRECT_VFD OFF CACHE BOOL "Build the Direct I/O Virtual File Driver" FORCE) + SET (HDF5_ENABLE_PARALLEL OFF CACHE BOOL "Enable parallel build (requires MPI)" FORCE) +SET (MPIEXEC_MAX_NUMPROCS "3" CACHE STRING "Minimum number of processes for HDF parallel tests" FORCE) + +SET (HDF5_BUILD_PARALLEL_ALL OFF CACHE BOOL "Build Parallel Programs" FORCE) + SET (HDF5_ENABLE_COVERAGE OFF CACHE BOOL "Enable code coverage for Libraries and Programs" FORCE) SET (HDF5_ENABLE_USING_MEMCHECKER ON CACHE BOOL "Indicate that a memory checker is used" FORCE) SET (HDF5_DISABLE_COMPILER_WARNINGS OFF CACHE BOOL "Disable compiler warnings" FORCE) +SET (HDF5_USE_FOLDERS ON CACHE BOOL "Enable folder grouping of projects in IDEs." FORCE) + SET (HDF5_USE_16_API_DEFAULT OFF CACHE BOOL "Use the HDF5 1.6.x API by default" FORCE) +SET (HDF5_USE_18_API_DEFAULT OFF CACHE BOOL "Use the HDF5 1.8.x API by default" FORCE) + SET (HDF5_ENABLE_THREADSAFE OFF CACHE BOOL "(WINDOWS)Enable Threadsafety" FORCE) SET (HDF5_PACKAGE_EXTLIBS OFF CACHE BOOL "(WINDOWS)CPACK - include external libraries" FORCE) +SET (HDF5_NO_PACKAGES OFF CACHE BOOL "CPACK - Disable packaging" FORCE) + SET (HDF5_ALLOW_EXTERNAL_SUPPORT "NO" CACHE STRING "Allow External Library Building" FORCE) SET (ZLIB_SVN_URL "http://svn.hdfgroup.uiuc.edu/zlib/trunk" CACHE STRING "Use ZLib from HDF repository" FORCE) diff --git a/config/cmake/runTest.cmake b/config/cmake/runTest.cmake index 34fac1f..139819f 100644 --- a/config/cmake/runTest.cmake +++ b/config/cmake/runTest.cmake @@ -51,7 +51,7 @@ IF (ERROR_APPEND) ENDIF (ERROR_APPEND) IF (TEST_APPEND) - FILE (APPEND ${TEST_OUTPUT} "${TEST_APPEND} ${TEST_RESULT}\n") + FILE (APPEND ${TEST_FOLDER}/${TEST_OUTPUT} "${TEST_APPEND} ${TEST_RESULT}\n") ENDIF (TEST_APPEND) # if the return value is !=${TEST_EXPECT} bail out diff --git a/configure b/configure index 437323a..f66bf21 100755 --- a/configure +++ b/configure @@ -3900,6 +3900,7 @@ elif test $hdf5_cv_host != $host; then as_fn_error $? "config.cache file is invalid" "$LINENO" 5 fi + case $host_os in aix*) host_os_novers=aix @@ -7210,7 +7211,9 @@ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $ ac_compiler_gnu=$ac_cv_c_compiler_gnu -for ac_prog in perl + PERL="" +if test "X$GCC" = "Xyes"; then + for ac_prog in perl do # Extract the first word of "$ac_prog", so it can be a program name with args. set dummy $ac_prog; ac_word=$2 @@ -7252,6 +7255,8 @@ fi test -n "$PERL" && break done +fi + if test -z "$AR"; then @@ -7446,6 +7451,7 @@ $as_echo "none" >&6; } ;; esac + if test "X$HDF_FORTRAN" = "Xyes" ; then ac_ext=${ac_fc_srcext-f} ac_compile='$FC -c $FCFLAGS $ac_fcflags_srcext conftest.$ac_ext >&5' @@ -7500,6 +7506,7 @@ ac_compiler_gnu=$ac_cv_c_compiler_gnu fi + if test "X${enable_shared}" = "X" -a "X${enable_parallel}" = "Xyes"; then echo ' shared libraries disabled in parallel' enable_shared="no" @@ -7519,14 +7526,16 @@ if test "X${HDF_FORTRAN}" = "Xyes" && test "X${enable_shared}" != "Xno"; then $as_echo_n "checking if shared Fortran libraries are supported... " >&6; } H5_FORTRAN_SHARED="yes" - case "`uname`" in + + case "`uname`" in Darwin*) H5_FORTRAN_SHARED="no" CHECK_WARN="Shared Fortran libraries not currently supported on Mac." ;; esac - if test "X${H5_FORTRAN_SHARED}" = "Xno"; then + + if test "X${H5_FORTRAN_SHARED}" = "Xno"; then { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $CHECK_WARN" >&5 @@ -7566,12 +7575,14 @@ if test "X${HDF_CXX}" = "Xyes" && test "X${enable_shared}" != "Xno"; then $as_echo_n "checking if shared C++ libraries are supported... " >&6; } H5_CXX_SHARED="yes" - if (echo dummy ${CXX} ${CXXLD} ${CFLAGS} ${CXXFLAGS} ${LDFLAGS} | grep 'DD64') > /dev/null; then + + if (echo dummy ${CXX} ${CXXLD} ${CFLAGS} ${CXXFLAGS} ${LDFLAGS} | grep 'DD64') > /dev/null; then H5_CXX_SHARED="no" CHECK_WARN="Shared C++ libraries not currently supported with +DD64 flag." fi - if test "X${H5_CXX_SHARED}" = "Xno"; then + + if test "X${H5_CXX_SHARED}" = "Xno"; then { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $CHECK_WARN" >&5 @@ -7603,11 +7614,13 @@ else fi + if (${CC-cc} -V 2>&1 | grep '^pgcc 6.0') > /dev/null && test "X$enable_production" = "Xyes"; then echo 'adding compiler flag to avoid optimization problem in pgcc' CC="${CC-cc} -Mx,28,0x8" fi + if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then case "`uname`" in CYGWIN*) @@ -22258,8 +22271,71 @@ fi done ;; + MINGW*) + for ac_header in io.h winsock2.h sys/timeb.h +do : + as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh` +ac_fn_c_check_header_mongrel "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default" +if eval test \"x\$"$as_ac_Header"\" = x"yes"; then : + cat >>confdefs.h <<_ACEOF +#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1 +_ACEOF + +fi + +done + + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lws2_32" >&5 +$as_echo_n "checking for main in -lws2_32... " >&6; } +if ${ac_cv_lib_ws2_32_main+:} false; then : + $as_echo_n "(cached) " >&6 +else + ac_check_lib_save_LIBS=$LIBS +LIBS="-lws2_32 $LIBS" +cat confdefs.h - <<_ACEOF >conftest.$ac_ext +/* end confdefs.h. */ + + +#ifdef FC_DUMMY_MAIN +#ifndef FC_DUMMY_MAIN_EQ_F77 +# ifdef __cplusplus + extern "C" +# endif + int FC_DUMMY_MAIN() { return 1; } +#endif +#endif +int +main () +{ +return main (); + ; + return 0; +} +_ACEOF +if ac_fn_c_try_link "$LINENO"; then : + ac_cv_lib_ws2_32_main=yes +else + ac_cv_lib_ws2_32_main=no +fi +rm -f core conftest.err conftest.$ac_objext \ + conftest$ac_exeext conftest.$ac_ext +LIBS=$ac_check_lib_save_LIBS +fi +{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_ws2_32_main" >&5 +$as_echo "$ac_cv_lib_ws2_32_main" >&6; } +if test "x$ac_cv_lib_ws2_32_main" = xyes; then : + cat >>confdefs.h <<_ACEOF +#define HAVE_LIBWS2_32 1 +_ACEOF + + LIBS="-lws2_32 $LIBS" + +fi +ac_cv_lib_ws2_32=ac_cv_lib_ws2_32_main + + ;; *) - for ac_header in io.h winsock.h sys/timeb.h + for ac_header in io.h winsock2.h sys/timeb.h do : as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh` ac_fn_c_check_header_mongrel "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default" @@ -29998,7 +30074,7 @@ if test -n "$TESTPARALLEL"; then fi fi -ac_config_files="$ac_config_files src/libhdf5.settings Makefile src/Makefile test/Makefile test/testcheck_version.sh test/testerror.sh test/testflushrefresh.sh test/H5srcdir_str.h test/testlibinfo.sh test/testlinks_env.sh testpar/Makefile testpar/testph5.sh perform/Makefile tools/Makefile tools/h5dump/Makefile tools/h5dump/testh5dump.sh tools/h5dump/testh5dumpxml.sh tools/h5ls/testh5ls.sh tools/h5import/Makefile tools/h5diff/Makefile tools/h5jam/Makefile tools/h5jam/testh5jam.sh tools/h5repack/Makefile tools/h5repack/h5repack.sh tools/h5ls/Makefile tools/h5copy/Makefile tools/lib/Makefile tools/misc/Makefile tools/misc/h5cc tools/misc/testh5repart.sh tools/h5stat/testh5stat.sh tools/h5stat/Makefile examples/Makefile examples/run-c-ex.sh examples/testh5cc.sh c++/Makefile c++/src/Makefile c++/src/h5c++ c++/test/Makefile c++/test/H5srcdir_str.h c++/examples/Makefile c++/examples/run-c++-ex.sh c++/examples/testh5c++.sh fortran/Makefile fortran/src/h5fc fortran/src/Makefile fortran/test/Makefile fortran/testpar/Makefile fortran/examples/Makefile fortran/examples/run-fortran-ex.sh fortran/examples/testh5fc.sh hl/Makefile hl/src/Makefile hl/test/Makefile hl/test/H5srcdir_str.h hl/test/test_ld.sh hl/tools/Makefile hl/tools/gif2h5/Makefile hl/tools/h5watch/Makefile hl/tools/h5watch/testh5watch.sh hl/examples/Makefile hl/examples/run-hlc-ex.sh hl/c++/Makefile hl/c++/src/Makefile hl/c++/test/Makefile hl/c++/examples/Makefile hl/c++/examples/run-hlc++-ex.sh hl/fortran/Makefile hl/fortran/src/Makefile hl/fortran/test/Makefile hl/fortran/examples/Makefile hl/fortran/examples/run-hlfortran-ex.sh" +ac_config_files="$ac_config_files src/libhdf5.settings Makefile src/Makefile test/Makefile test/testcheck_version.sh test/testerror.sh test/testflushrefresh.sh test/H5srcdir_str.h test/testlibinfo.sh test/testlinks_env.sh testpar/Makefile testpar/testph5.sh perform/Makefile tools/Makefile tools/h5dump/Makefile tools/h5dump/testh5dump.sh tools/h5dump/testh5dumppbits.sh tools/h5dump/testh5dumpxml.sh tools/h5ls/testh5ls.sh tools/h5import/Makefile tools/h5diff/Makefile tools/h5jam/Makefile tools/h5jam/testh5jam.sh tools/h5repack/Makefile tools/h5repack/h5repack.sh tools/h5ls/Makefile tools/h5copy/Makefile tools/lib/Makefile tools/misc/Makefile tools/misc/h5cc tools/misc/testh5repart.sh tools/h5stat/testh5stat.sh tools/h5stat/Makefile examples/Makefile examples/run-c-ex.sh examples/testh5cc.sh c++/Makefile c++/src/Makefile c++/src/h5c++ c++/test/Makefile c++/test/H5srcdir_str.h c++/examples/Makefile c++/examples/run-c++-ex.sh c++/examples/testh5c++.sh fortran/Makefile fortran/src/h5fc fortran/src/Makefile fortran/test/Makefile fortran/testpar/Makefile fortran/examples/Makefile fortran/examples/run-fortran-ex.sh fortran/examples/testh5fc.sh hl/Makefile hl/src/Makefile hl/test/Makefile hl/test/H5srcdir_str.h hl/test/test_ld.sh hl/tools/Makefile hl/tools/gif2h5/Makefile hl/tools/h5watch/Makefile hl/tools/h5watch/testh5watch.sh hl/examples/Makefile hl/examples/run-hlc-ex.sh hl/c++/Makefile hl/c++/src/Makefile hl/c++/test/Makefile hl/c++/examples/Makefile hl/c++/examples/run-hlc++-ex.sh hl/fortran/Makefile hl/fortran/src/Makefile hl/fortran/test/Makefile hl/fortran/examples/Makefile hl/fortran/examples/run-hlfortran-ex.sh" cat >confcache <<\_ACEOF @@ -31275,6 +31351,7 @@ do "tools/Makefile") CONFIG_FILES="$CONFIG_FILES tools/Makefile" ;; "tools/h5dump/Makefile") CONFIG_FILES="$CONFIG_FILES tools/h5dump/Makefile" ;; "tools/h5dump/testh5dump.sh") CONFIG_FILES="$CONFIG_FILES tools/h5dump/testh5dump.sh" ;; + "tools/h5dump/testh5dumppbits.sh") CONFIG_FILES="$CONFIG_FILES tools/h5dump/testh5dumppbits.sh" ;; "tools/h5dump/testh5dumpxml.sh") CONFIG_FILES="$CONFIG_FILES tools/h5dump/testh5dumpxml.sh" ;; "tools/h5ls/testh5ls.sh") CONFIG_FILES="$CONFIG_FILES tools/h5ls/testh5ls.sh" ;; "tools/h5import/Makefile") CONFIG_FILES="$CONFIG_FILES tools/h5import/Makefile" ;; diff --git a/configure.in b/configure.in index 6d65538..03ac547 100644 --- a/configure.in +++ b/configure.in @@ -697,14 +697,20 @@ dnl Change back to the C language AC_LANG_POP(C++) dnl ---------------------------------------------------------------------- -dnl Check if they have Perl installed on their system. -AC_CHECK_PROGS([PERL], [perl],, [$PATH]) +dnl Check if they have Perl installed on their system. We only need Perl +dnl if they're using a GNU compiler. +dnl +AC_SUBST([PERL]) PERL="" +if test "X$GCC" = "Xyes"; then + AC_CHECK_PROGS([PERL], [perl],, [$PATH]) +fi dnl ---------------------------------------------------------------------- dnl Check which archiving tool to use. This needs to be done before dnl the AM_PROG_LIBTOOL macro. dnl + if test -z "$AR"; then AC_CHECK_PROGS([AR], [ar xar], [:], [$PATH]) fi @@ -845,6 +851,7 @@ dnl Furthermore, the name of the compiler might tell us how to run the dnl resulting executable. For `mpif90' the executable should be run with dnl `mpiexec' from the same directory as mpif90 if it exists. dnl + if test "X$HDF_FORTRAN" = "Xyes" ; then dnl Change to the Fortran 90 language AC_LANG_PUSH(Fortran) @@ -899,6 +906,7 @@ fi dnl ----------------------------------------------------------------------------- dnl If shared libraries are being used with parallel, disable them, unless the dnl user explicity enables them via the '--enable-shared' option. + if test "X${enable_shared}" = "X" -a "X${enable_parallel}" = "Xyes"; then echo ' shared libraries disabled in parallel' enable_shared="no" @@ -913,7 +921,7 @@ fi dnl ---------------------------------------------------------------------- dnl Fortran libraries are not currently supported on Mac. Disable them. -dnl (this is overridable with --enable-unsupported). +dnl this is overridable with '--enable-unsupported'. dnl AC_SUBST([H5_FORTRAN_SHARED]) H5_FORTRAN_SHARED="no" @@ -922,6 +930,7 @@ if test "X${HDF_FORTRAN}" = "Xyes" && test "X${enable_shared}" != "Xno"; then H5_FORTRAN_SHARED="yes" dnl Disable fortran shared libraries on Mac. (MAM - 03/30/11) + case "`uname`" in Darwin*) H5_FORTRAN_SHARED="no" @@ -930,6 +939,7 @@ if test "X${HDF_FORTRAN}" = "Xyes" && test "X${enable_shared}" != "Xno"; then esac dnl Report results of check(s) + if test "X${H5_FORTRAN_SHARED}" = "Xno"; then AC_MSG_RESULT([no]) AC_MSG_WARN([$CHECK_WARN]) @@ -960,12 +970,14 @@ if test "X${HDF_CXX}" = "Xyes" && test "X${enable_shared}" != "Xno"; then H5_CXX_SHARED="yes" dnl Disable C++ shared libraries if DD64 flag is being used. + if (echo dummy ${CXX} ${CXXLD} ${CFLAGS} ${CXXFLAGS} ${LDFLAGS} | grep 'DD64') > /dev/null; then H5_CXX_SHARED="no" CHECK_WARN="Shared C++ libraries not currently supported with +DD64 flag." fi dnl Report results of check(s) + if test "X${H5_CXX_SHARED}" = "Xno"; then AC_MSG_RESULT([no]) AC_MSG_WARN([$CHECK_WARN]) @@ -990,6 +1002,7 @@ dnl pgcc version 6.0x have optimization (-O, -O2 or -O3) problem. Detect dnl these versions and add option "-Mx,28,0x8" to the compiler to avoid dnl the problem if optimization is enabled. dnl + if (${CC-cc} -V 2>&1 | grep '^pgcc 6.0') > /dev/null && test "X$enable_production" = "Xyes"; then echo 'adding compiler flag to avoid optimization problem in pgcc' CC="${CC-cc} -Mx,28,0x8" @@ -998,6 +1011,7 @@ fi dnl ---------------------------------------------------------------------- dnl Shared libraries are not currently supported under Cygwin, so configure dnl disables them unless --enable-unsupported has been supplied by the user. + if test "X${ALLOW_UNSUPPORTED}" != "Xyes"; then case "`uname`" in CYGWIN*) @@ -1058,7 +1072,7 @@ esac dnl ---------------------------------------------------------------------- dnl Some users have reported problems with libtool's use of '-Wl,-rpath' to -dnl link shared libraries in nondefulat directories. Allow users to +dnl link shared libraries in nondefault directories. Allow users to dnl disable embedding the rpath information in the executables and to dnl instead solely rely on the information in LD_LIBRARY_PATH. AC_MSG_CHECKING([if -Wl,-rpath should be used to link shared libs in nondefault directories]) @@ -1271,8 +1285,12 @@ case "`uname`" in CYGWIN*) AC_CHECK_HEADERS([io.h sys/timeb.h]) ;; + MINGW*) + AC_CHECK_HEADERS([io.h winsock2.h sys/timeb.h]) + AC_HAVE_LIBRARY([ws2_32]) + ;; *) - AC_CHECK_HEADERS([io.h winsock.h sys/timeb.h]) + AC_CHECK_HEADERS([io.h winsock2.h sys/timeb.h]) ;; esac @@ -4384,6 +4402,7 @@ AC_CONFIG_FILES([src/libhdf5.settings tools/Makefile tools/h5dump/Makefile tools/h5dump/testh5dump.sh + tools/h5dump/testh5dumppbits.sh tools/h5dump/testh5dumpxml.sh tools/h5ls/testh5ls.sh tools/h5import/Makefile diff --git a/fortran/src/CMakeLists.txt b/fortran/src/CMakeLists.txt index 3d1c127..c0fea8c 100644 --- a/fortran/src/CMakeLists.txt +++ b/fortran/src/CMakeLists.txt @@ -84,9 +84,6 @@ ADD_CUSTOM_COMMAND ( # f90CStub lib #----------------------------------------------------------------------------- SET (f90CStub_C_SRCS - # generated files - ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h - # normal distribution ${HDF5_F90_SRC_SOURCE_DIR}/H5f90kit.c ${HDF5_F90_SRC_SOURCE_DIR}/H5_f.c @@ -114,11 +111,17 @@ ENDIF (H5_HAVE_PARALLEL) SET_SOURCE_FILES_PROPERTIES (${f90CStub_C_SRCS} PROPERTIES LANGUAGE C) -ADD_LIBRARY (${HDF5_F90_C_LIB_TARGET} ${LIB_TYPE} ${f90CStub_C_SRCS}) +SET (f90CStub_C_HDRS + # generated files + ${HDF5_F90_BINARY_DIR}/H5f90i_gen.h +) + +ADD_LIBRARY (${HDF5_F90_C_LIB_TARGET} ${LIB_TYPE} ${f90CStub_C_SRCS} ${f90CStub_C_HDRS}) TARGET_LINK_LIBRARIES (${HDF5_F90_C_LIB_TARGET} ${HDF5_LIB_TARGET} ${LINK_LIBS}) SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_F90_C_LIB_TARGET}") H5_SET_LIB_OPTIONS (${HDF5_F90_C_LIB_TARGET} ${HDF5_F90_C_LIB_NAME} ${LIB_TYPE}) SET_TARGET_PROPERTIES (${HDF5_F90_C_LIB_TARGET} PROPERTIES FOLDER libraries/fortran) +SET_TARGET_PROPERTIES (${HDF5_F90_C_LIB_TARGET} PROPERTIES LINKER_LANGUAGE C) #----------------------------------------------------------------------------- # Fortran 2003 standard @@ -267,6 +270,10 @@ ENDIF (WIN32 AND NOT CYGWIN) # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_F90_C_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} fortlibraries) + INSTALL_TARGET_PDB (${HDF5_F90_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} fortlibraries) + INSTALL ( TARGETS ${HDF5_F90_C_LIB_TARGET} diff --git a/hl/c++/src/CMakeLists.txt b/hl/c++/src/CMakeLists.txt index ad5454d..e0ca0e9 100644 --- a/hl/c++/src/CMakeLists.txt +++ b/hl/c++/src/CMakeLists.txt @@ -36,6 +36,9 @@ INSTALL ( # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_HL_CPP_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} hlcpplibraries) + INSTALL ( TARGETS ${HDF5_HL_CPP_LIB_TARGET} diff --git a/hl/fortran/src/CMakeLists.txt b/hl/fortran/src/CMakeLists.txt index 916e9e1..b6f6d08 100644 --- a/hl/fortran/src/CMakeLists.txt +++ b/hl/fortran/src/CMakeLists.txt @@ -24,13 +24,13 @@ SET (HDF5_HL_F90_C_SRCS SET_SOURCE_FILES_PROPERTIES (${HDF5_HL_F90_C_SRCS} PROPERTIES LANGUAGE C) SET (HDF5_HL_F90_HEADERS ${HDF5_HL_F90_SRC_SOURCE_DIR}/H5LTf90proto.h) -SET_SOURCE_FILES_PROPERTIES (${HDF5_HL_F90_HEADERS} PROPERTIES LANGUAGE C) ADD_LIBRARY (${HDF5_HL_F90_C_LIB_TARGET} ${LIB_TYPE} ${HDF5_HL_F90_C_SRCS} ${HDF5_HL_F90_HEADERS}) TARGET_LINK_LIBRARIES (${HDF5_HL_F90_C_LIB_TARGET} ${HDF5_F90_C_LIB_TARGET} ${HDF5_HL_LIB_TARGET}) SET_GLOBAL_VARIABLE (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF5_HL_F90_C_LIB_TARGET}") H5_SET_LIB_OPTIONS (${HDF5_HL_F90_C_LIB_TARGET} ${HDF5_HL_F90_C_LIB_NAME} ${LIB_TYPE}) SET_TARGET_PROPERTIES (${HDF5_HL_F90_C_LIB_TARGET} PROPERTIES FOLDER libraries/hl/fortran) +SET_TARGET_PROPERTIES (${HDF5_HL_F90_C_LIB_TARGET} PROPERTIES LINKER_LANGUAGE C) #----------------------------------------------------------------------------- # Fortran Modules @@ -95,6 +95,10 @@ ENDIF (WIN32 AND NOT CYGWIN) # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_HL_F90_C_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} hlfortlibraries) + INSTALL_TARGET_PDB (${HDF5_HL_F90_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} hlfortlibraries) + INSTALL ( TARGETS ${HDF5_HL_F90_C_LIB_TARGET} diff --git a/hl/src/CMakeLists.txt b/hl/src/CMakeLists.txt index f144b94..2df2c23 100644 --- a/hl/src/CMakeLists.txt +++ b/hl/src/CMakeLists.txt @@ -55,6 +55,9 @@ INSTALL ( # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_HL_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} hllibraries) + INSTALL ( TARGETS ${HDF5_HL_LIB_TARGET} diff --git a/hl/tools/CMakeLists.txt b/hl/tools/CMakeLists.txt index 4fc83b7..28943d6 100644 --- a/hl/tools/CMakeLists.txt +++ b/hl/tools/CMakeLists.txt @@ -54,7 +54,7 @@ INSTALL ( gif2h5 h52gif RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT hltoolsapplications ) diff --git a/perform/CMakeLists.txt b/perform/CMakeLists.txt index 1bcf628..421caba 100644 --- a/perform/CMakeLists.txt +++ b/perform/CMakeLists.txt @@ -110,25 +110,27 @@ IF (H5_HAVE_PARALLEL) SET_TARGET_PROPERTIES (h5perf_alone PROPERTIES FOLDER perform) ENDIF (HDF5_BUILD_PERFORM_STANDALONE) - #-- Adding test for benchpar - SET (benchpar_SRCS - ${HDF5_PERFORM_SOURCE_DIR}/benchpar.c - ) - ADD_EXECUTABLE (benchpar ${benchpar_SRCS}) - TARGET_NAMING (benchpar ${LIB_TYPE}) - TARGET_LINK_LIBRARIES (benchpar ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) - SET_TARGET_PROPERTIES (benchpar PROPERTIES FOLDER perform) - - #-- Adding test for mpi-perf - IF (NOT WIN32) - SET (mpi-perf_SRCS - ${HDF5_PERFORM_SOURCE_DIR}/mpi-perf.c + IF (HDF5_BUILD_PARALLEL_ALL) + #-- Adding test for benchpar + SET (benchpar_SRCS + ${HDF5_PERFORM_SOURCE_DIR}/benchpar.c ) - ADD_EXECUTABLE (mpi-perf ${mpi-perf_SRCS}) - TARGET_NAMING (mpi-perf ${LIB_TYPE}) - TARGET_LINK_LIBRARIES (mpi-perf ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) - SET_TARGET_PROPERTIES (mpi-perf PROPERTIES FOLDER perform) - ENDIF (NOT WIN32) + ADD_EXECUTABLE (benchpar ${benchpar_SRCS}) + TARGET_NAMING (benchpar ${LIB_TYPE}) + TARGET_LINK_LIBRARIES (benchpar ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) + SET_TARGET_PROPERTIES (benchpar PROPERTIES FOLDER perform) + + #-- Adding test for mpi-perf + IF (NOT WIN32) + SET (mpi-perf_SRCS + ${HDF5_PERFORM_SOURCE_DIR}/mpi-perf.c + ) + ADD_EXECUTABLE (mpi-perf ${mpi-perf_SRCS}) + TARGET_NAMING (mpi-perf ${LIB_TYPE}) + TARGET_LINK_LIBRARIES (mpi-perf ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) + SET_TARGET_PROPERTIES (mpi-perf PROPERTIES FOLDER perform) + ENDIF (NOT WIN32) + ENDIF (HDF5_BUILD_PARALLEL_ALL) ENDIF (H5_HAVE_PARALLEL) @@ -188,9 +190,11 @@ IF (H5_HAVE_PARALLEL) ADD_TEST (NAME PERFORM_h5perf_alone COMMAND ${MPIEXEC} ${MPIEXEC_PREFLAGS} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_POSTFLAGS} $) ENDIF (HDF5_BUILD_PERFORM_STANDALONE) -# ADD_TEST (NAME PERFORM_benchpar COMMAND ${MPIEXEC} ${MPIEXEC_PREFLAGS} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_POSTFLAGS} $) + IF (HDF5_BUILD_PARALLEL_ALL) + ADD_TEST (NAME PERFORM_benchpar COMMAND ${MPIEXEC} ${MPIEXEC_PREFLAGS} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_POSTFLAGS} $) - IF (NOT WIN32) - ADD_TEST (NAME PERFORM_mpi-perf COMMAND ${MPIEXEC} ${MPIEXEC_PREFLAGS} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_POSTFLAGS} $) - ENDIF (NOT WIN32) + IF (NOT WIN32) + ADD_TEST (NAME PERFORM_mpi-perf COMMAND ${MPIEXEC} ${MPIEXEC_PREFLAGS} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_POSTFLAGS} $) + ENDIF (NOT WIN32) + ENDIF (HDF5_BUILD_PARALLEL_ALL) ENDIF (H5_HAVE_PARALLEL) diff --git a/perform/sio_timer.h b/perform/sio_timer.h index 04432af..46702c3 100644 --- a/perform/sio_timer.h +++ b/perform/sio_timer.h @@ -26,9 +26,9 @@ # include #endif -#ifdef H5_HAVE_WINSOCK_H +#ifdef H5_HAVE_WINSOCK2_H # include -#endif /* H5_HAVE_WINSOCK_H */ +#endif /* H5_HAVE_WINSOCK2_H */ /* The different types of timers we can have */ typedef enum timer_type_ { diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index 6c166da..6c2940eb 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -21,7 +21,6 @@ SET (H5_HDRS ) IDE_GENERATED_PROPERTIES ("H5" "${H5_HDRS}" "${H5_SRCS}" ) - SET (H5A_SRCS ${HDF5_SRC_DIR}/H5A.c ${HDF5_SRC_DIR}/H5Abtree2.c @@ -36,7 +35,6 @@ SET (H5A_HDRS ) IDE_GENERATED_PROPERTIES ("H5A" "${H5A_HDRS}" "${H5A_SRCS}" ) - SET (H5AC_SRCS ${HDF5_SRC_DIR}/H5AC.c ) @@ -46,7 +44,6 @@ SET (H5AC_HDRS ) IDE_GENERATED_PROPERTIES ("H5AC" "${H5AC_HDRS}" "${H5AC_SRCS}" ) - SET (H5B_SRCS ${HDF5_SRC_DIR}/H5B.c ${HDF5_SRC_DIR}/H5Bcache.c @@ -123,7 +120,6 @@ SET (H5D_HDRS ) IDE_GENERATED_PROPERTIES ("H5D" "${H5D_HDRS}" "${H5D_SRCS}" ) - SET (H5E_SRCS ${HDF5_SRC_DIR}/H5E.c ${HDF5_SRC_DIR}/H5Edeprec.c @@ -263,7 +259,6 @@ SET (H5FS_HDRS ) IDE_GENERATED_PROPERTIES ("H5FS" "${H5FS_HDRS}" "${H5FS_SRCS}" ) - SET (H5G_SRCS ${HDF5_SRC_DIR}/H5G.c ${HDF5_SRC_DIR}/H5Gbtree2.c @@ -290,7 +285,6 @@ SET (H5G_HDRS ) IDE_GENERATED_PROPERTIES ("H5G" "${H5G_HDRS}" "${H5G_SRCS}" ) - SET (H5HF_SRCS ${HDF5_SRC_DIR}/H5HF.c ${HDF5_SRC_DIR}/H5HFbtree2.c @@ -315,7 +309,6 @@ SET (H5HF_HDRS ) IDE_GENERATED_PROPERTIES ("H5HF" "${H5HF_HDRS}" "${H5HF_SRCS}" ) - SET (H5HG_SRCS ${HDF5_SRC_DIR}/H5HG.c ${HDF5_SRC_DIR}/H5HGcache.c @@ -328,7 +321,6 @@ SET (H5HG_HDRS ) IDE_GENERATED_PROPERTIES ("H5HG" "${H5HG_HDRS}" "${H5HG_SRCS}" ) - SET (H5HL_SRCS ${HDF5_SRC_DIR}/H5HL.c ${HDF5_SRC_DIR}/H5HLcache.c @@ -403,7 +395,6 @@ SET (H5MP_HDRS ) IDE_GENERATED_PROPERTIES ("H5MP" "${H5MP_HDRS}" "${H5MP_SRCS}" ) - SET (H5O_SRCS ${HDF5_SRC_DIR}/H5O.c ${HDF5_SRC_DIR}/H5Oainfo.c @@ -448,7 +439,6 @@ SET (H5O_HDRS ) IDE_GENERATED_PROPERTIES ("H5O" "${H5O_HDRS}" "${H5O_SRCS}" ) - SET (H5P_SRCS ${HDF5_SRC_DIR}/H5P.c ${HDF5_SRC_DIR}/H5Pacpl.c @@ -625,7 +615,6 @@ SET (H5Z_HDRS ) IDE_GENERATED_PROPERTIES ("H5Z" "${H5Z_HDRS}" "${H5Z_SRCS}" ) - SET (common_SRCS ${H5_SRCS} ${H5A_SRCS} @@ -841,6 +830,9 @@ ENDIF (NOT HDF5_INSTALL_NO_DEVELOPMENT) # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} libraries) + INSTALL ( TARGETS ${HDF5_LIB_TARGET} diff --git a/src/H5private.h b/src/H5private.h index f8b070a..d6e22eb 100644 --- a/src/H5private.h +++ b/src/H5private.h @@ -155,7 +155,7 @@ #define WIN32_LEAN_AND_MEAN /* Exclude rarely-used stuff from Windows headers */ #define NOGDI /* Exclude Graphic Display Interface macros */ -#ifdef H5_HAVE_WINSOCK_H +#ifdef H5_HAVE_WINSOCK2_H #include #endif diff --git a/testpar/t_mpi.c b/testpar/t_mpi.c index 6cba5af..fa9cf9d 100644 --- a/testpar/t_mpi.c +++ b/testpar/t_mpi.c @@ -1178,13 +1178,17 @@ main(int argc, char **argv) * MPIO MPIO File size range test *=======================================*/ MPI_BANNER("MPIO File size range test..."); +#ifndef H5_HAVE_WIN32_API ret_code = test_mpio_gb_file(filenames[0]); ret_code = errors_sum(ret_code); if (mpi_rank==0 && ret_code > 0){ printf("***FAILED with %d total errors\n", ret_code); nerrors += ret_code; } - +#else + if (mpi_rank==0) + printf(" will be skipped on Windows (JIRA HDDFV-8064)\n"); +#endif /*======================================= * MPIO independent overlapping writes diff --git a/testpar/testphdf5.c b/testpar/testphdf5.c index 3a86642..f27d09b 100644 --- a/testpar/testphdf5.c +++ b/testpar/testphdf5.c @@ -412,8 +412,12 @@ int main(int argc, char **argv) "collective group and dataset write", &collngroups_params); AddTest("ingrpr", independent_group_read, NULL, "independent group and dataset read", &collngroups_params); +#ifndef H5_HAVE_WIN32_API AddTest("bigdset", big_dataset, NULL, "big dataset test", PARATESTFILE); +#else + printf("big dataset test will be skipped on Windows (JIRA HDDFV-8064)\n"); +#endif AddTest("fill", dataset_fillvalue, NULL, "dataset fill value", PARATESTFILE); diff --git a/tools/h5copy/CMakeLists.txt b/tools/h5copy/CMakeLists.txt index f9e7c12..94eb732 100644 --- a/tools/h5copy/CMakeLists.txt +++ b/tools/h5copy/CMakeLists.txt @@ -374,11 +374,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5copy ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5copy RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5diff/CMakeLists.txt b/tools/h5diff/CMakeLists.txt index da2aaf9..3357b97 100644 --- a/tools/h5diff/CMakeLists.txt +++ b/tools/h5diff/CMakeLists.txt @@ -51,299 +51,278 @@ IF (BUILD_TESTING) # -------------------------------------------------------------------- # Copy all the HDF5 files from the test directory into the source directory # -------------------------------------------------------------------- - SET (HDF5_REFERENCE_FILES - h5diff_10.txt - h5diff_100.txt - #h5diff_101.txt - #h5diff_102.txt - #h5diff_103.txt - #h5diff_104.txt - h5diff_11.txt - h5diff_12.txt - h5diff_13.txt - h5diff_14.txt - h5diff_15.txt - h5diff_16_1.txt - h5diff_16_2.txt - h5diff_16_3.txt - h5diff_17.txt - h5diff_171.txt - h5diff_172.txt - h5diff_18_1.txt - h5diff_18.txt - h5diff_20.txt - h5diff_200.txt - h5diff_201.txt - h5diff_202.txt - h5diff_203.txt - h5diff_204.txt - h5diff_205.txt - h5diff_206.txt - h5diff_207.txt - h5diff_208.txt - h5diff_220.txt - h5diff_221.txt - h5diff_222.txt - h5diff_223.txt - h5diff_224.txt - h5diff_21.txt - h5diff_22.txt - h5diff_23.txt - h5diff_24.txt - h5diff_25.txt - h5diff_26.txt - h5diff_27.txt - h5diff_28.txt - h5diff_300.txt - h5diff_400.txt - h5diff_401.txt - h5diff_402.txt - h5diff_403.txt - h5diff_404.txt - h5diff_405.txt - h5diff_406.txt - h5diff_407.txt - h5diff_408.txt - h5diff_409.txt - h5diff_410.txt - h5diff_411.txt - h5diff_412.txt - h5diff_413.txt - h5diff_414.txt - h5diff_415.txt - h5diff_416.txt - h5diff_417.txt - h5diff_418.txt - h5diff_419.txt - h5diff_420.txt - h5diff_421.txt - h5diff_422.txt - h5diff_423.txt - h5diff_424.txt - h5diff_425.txt - h5diff_450.txt - h5diff_451.txt - h5diff_452.txt - h5diff_453.txt - h5diff_454.txt - h5diff_455.txt - h5diff_456.txt - h5diff_457.txt - h5diff_458.txt - h5diff_459.txt - h5diff_465.txt - h5diff_466.txt - h5diff_467.txt - h5diff_468.txt - h5diff_469.txt - h5diff_480.txt - h5diff_481.txt - h5diff_482.txt - h5diff_483.txt - h5diff_484.txt - h5diff_485.txt - h5diff_486.txt - h5diff_487.txt - h5diff_50.txt - h5diff_51.txt - h5diff_52.txt - h5diff_53.txt - h5diff_54.txt - h5diff_55.txt - h5diff_56.txt - h5diff_57.txt - h5diff_58.txt - h5diff_500.txt - h5diff_501.txt - h5diff_502.txt - h5diff_503.txt - h5diff_504.txt - h5diff_505.txt - h5diff_506.txt - h5diff_507.txt - h5diff_508.txt - h5diff_509.txt - h5diff_510.txt - h5diff_511.txt - h5diff_512.txt - h5diff_513.txt - h5diff_514.txt - h5diff_515.txt - h5diff_516.txt - h5diff_517.txt - h5diff_518.txt - h5diff_530.txt - h5diff_540.txt - h5diff_600.txt - h5diff_601.txt - h5diff_603.txt - h5diff_604.txt - h5diff_605.txt - h5diff_606.txt - h5diff_607.txt - h5diff_608.txt - h5diff_609.txt - h5diff_610.txt - h5diff_612.txt - h5diff_613.txt - h5diff_614.txt - h5diff_615.txt - h5diff_616.txt - h5diff_617.txt - h5diff_618.txt - h5diff_619.txt - h5diff_621.txt - h5diff_622.txt - h5diff_623.txt - h5diff_624.txt - h5diff_625.txt - h5diff_626.txt - h5diff_627.txt - h5diff_628.txt - h5diff_629.txt - h5diff_630.txt - h5diff_631.txt - h5diff_640.txt - h5diff_641.txt - h5diff_642.txt - h5diff_643.txt - h5diff_644.txt - h5diff_645.txt - h5diff_646.txt - h5diff_70.txt - h5diff_700.txt - h5diff_701.txt - h5diff_702.txt - h5diff_703.txt - h5diff_704.txt - h5diff_705.txt - h5diff_706.txt - h5diff_707.txt - h5diff_708.txt - h5diff_709.txt - h5diff_710.txt - h5diff_80.txt - h5diff_90.txt + SET (LIST_HDF5_TEST_FILES + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_basic1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_basic2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_types.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_dtypes.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_dset1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_dset2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_hyper1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_hyper2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_empty.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_links.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_softlinks.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_linked_softlink.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_extlink_src.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_extlink_trg.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_ext2softlink_src.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_ext2softlink_trg.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_dset_zero_dim_size1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_dset_zero_dim_size2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_danglelinks1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_danglelinks2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_grp_recurse1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_grp_recurse2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_grp_recurse_ext1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_grp_recurse_ext2-1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_grp_recurse_ext2-2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_grp_recurse_ext2-3.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_exclude1-1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_exclude1-2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_exclude2-1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_exclude2-2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_exclude3-1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_exclude3-2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_comp_vl_strs.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr_v_level1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr_v_level2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/compounds_array_vlen1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/compounds_array_vlen2.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/non_comparables1.h5 + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/non_comparables2.h5 ) - SET (HDF5_REFERENCE_TEST_FILES - h5diff_basic1.h5 - h5diff_basic2.h5 - h5diff_types.h5 - h5diff_dtypes.h5 - h5diff_attr1.h5 - h5diff_attr2.h5 - h5diff_dset1.h5 - h5diff_dset2.h5 - h5diff_hyper1.h5 - h5diff_hyper2.h5 - h5diff_empty.h5 - h5diff_links.h5 - h5diff_softlinks.h5 - h5diff_linked_softlink.h5 - h5diff_extlink_src.h5 - h5diff_extlink_trg.h5 - h5diff_ext2softlink_src.h5 - h5diff_ext2softlink_trg.h5 - h5diff_dset_zero_dim_size1.h5 - h5diff_dset_zero_dim_size2.h5 - h5diff_danglelinks1.h5 - h5diff_danglelinks2.h5 - h5diff_grp_recurse1.h5 - h5diff_grp_recurse2.h5 - h5diff_grp_recurse_ext1.h5 - h5diff_grp_recurse_ext2-1.h5 - h5diff_grp_recurse_ext2-2.h5 - h5diff_grp_recurse_ext2-3.h5 - h5diff_exclude1-1.h5 - h5diff_exclude1-2.h5 - h5diff_exclude2-1.h5 - h5diff_exclude2-2.h5 - h5diff_exclude3-1.h5 - h5diff_exclude3-2.h5 - h5diff_comp_vl_strs.h5 - h5diff_attr_v_level1.h5 - h5diff_attr_v_level2.h5 - compounds_array_vlen1.h5 - compounds_array_vlen2.h5 - non_comparables1.h5 - non_comparables2.h5 + + SET (LIST_OTHER_TEST_FILES + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_10.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_100.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_101.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_102.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_103.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_104.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_11.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_12.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_13.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_14.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_15.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_16_1.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_16_2.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_16_3.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_17.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_171.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_172.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_18_1.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_18.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_20.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_200.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_201.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_202.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_203.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_204.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_205.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_206.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_207.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_208.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_220.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_221.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_222.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_223.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_224.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_21.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_22.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_23.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_24.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_25.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_26.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_27.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_28.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_300.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_400.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_401.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_402.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_403.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_404.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_405.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_406.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_407.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_408.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_409.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_410.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_411.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_412.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_413.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_414.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_415.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_416.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_417.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_418.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_419.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_420.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_421.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_422.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_423.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_424.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_425.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_450.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_451.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_452.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_453.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_456.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_465.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_466.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_467.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_468.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_469.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_471.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_472.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_473.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_474.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_475.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_480.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_481.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_482.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_483.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_484.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_485.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_486.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_487.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_50.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_51.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_52.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_53.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_54.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_55.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_56.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_57.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_58.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_500.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_501.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_502.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_503.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_504.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_505.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_506.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_507.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_508.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_509.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_510.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_511.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_512.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_513.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_514.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_515.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_516.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_517.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_518.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_530.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_540.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_600.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_603.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_604.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_605.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_606.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_607.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_608.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_609.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_610.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_612.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_613.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_614.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_615.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_616.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_617.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_618.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_619.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_621.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_622.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_623.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_624.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_625.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_626.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_627.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_628.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_629.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_630.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_631.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_640.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_641.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_642.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_643.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_644.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_645.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_646.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_70.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_700.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_701.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_702.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_703.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_704.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_705.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_706.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_707.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_708.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_709.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_710.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_80.txt + ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_90.txt ) - FOREACH (txt_file ${HDF5_REFERENCE_FILES}) - SET (txtdest "${PROJECT_BINARY_DIR}/${txt_file}") - #MESSAGE (STATUS " Copying ${txt_file}") - ADD_CUSTOM_COMMAND ( - TARGET h5diff - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/${txt_file} ${txtdest} - ) - ENDFOREACH (txt_file ${HDF5_REFERENCE_FILES}) + # Make testfiles dir under build dir + FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") - FOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES}) - SET (dest "${PROJECT_BINARY_DIR}/${h5_file}") - #MESSAGE (STATUS " Copying ${h5_file}") + # + # copy test files from source to build dir + # + FOREACH (h5_tstfiles ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES}) + GET_FILENAME_COMPONENT(fname "${h5_tstfiles}" NAME) + SET (dest "${PROJECT_BINARY_DIR}/testfiles/${fname}") + #MESSAGE (STATUS " Copying ${fname}") ADD_CUSTOM_COMMAND ( TARGET h5diff POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/${h5_file} ${dest} + ARGS -E copy_if_different ${h5_tstfiles} ${dest} ) - ENDFOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES}) + ENDFOREACH (h5_tstfiles ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES}) - IF (WIN32 AND NOT CYGWIN) - ADD_CUSTOM_COMMAND ( - TARGET h5diff - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_101w.txt ${PROJECT_BINARY_DIR}/h5diff_101.txt - ) + # + # Overwrite system dependent files (Windows) + # + IF (WIN32 AND NOT CYGWIN) ADD_CUSTOM_COMMAND ( TARGET h5diff POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_102w.txt ${PROJECT_BINARY_DIR}/h5diff_102.txt - ) - ADD_CUSTOM_COMMAND ( - TARGET h5diff - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_103w.txt ${PROJECT_BINARY_DIR}/h5diff_103.txt - ) - - ADD_CUSTOM_COMMAND ( - TARGET h5diff - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_104w.txt ${PROJECT_BINARY_DIR}/h5diff_104.txt - ) - ELSE (WIN32 AND NOT CYGWIN) - ADD_CUSTOM_COMMAND ( - TARGET h5diff - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_101.txt ${PROJECT_BINARY_DIR}/h5diff_101.txt + ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_101w.txt ${PROJECT_BINARY_DIR}/testfiles/h5diff_101.txt ) ADD_CUSTOM_COMMAND ( TARGET h5diff POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_102.txt ${PROJECT_BINARY_DIR}/h5diff_102.txt + ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_102w.txt ${PROJECT_BINARY_DIR}/testfiles/h5diff_102.txt ) ADD_CUSTOM_COMMAND ( TARGET h5diff POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_103.txt ${PROJECT_BINARY_DIR}/h5diff_103.txt + ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_103w.txt ${PROJECT_BINARY_DIR}/testfiles/h5diff_103.txt ) ADD_CUSTOM_COMMAND ( TARGET h5diff POST_BUILD COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_104.txt ${PROJECT_BINARY_DIR}/h5diff_104.txt + ARGS -E copy_if_different ${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_104w.txt ${PROJECT_BINARY_DIR}/testfiles/h5diff_104.txt ) ENDIF (WIN32 AND NOT CYGWIN) @@ -357,6 +336,7 @@ IF (BUILD_TESTING) # If using memchecker add tests without using scripts IF (HDF5_ENABLE_USING_MEMCHECKER) ADD_TEST (NAME H5DIFF-${resultfile} COMMAND $ ${ARGN}) + SET_TESTS_PROPERTIES (H5DIFF-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") IF (NOT ${resultcode} STREQUAL "0") SET_TESTS_PROPERTIES (H5DIFF-${resultfile} PROPERTIES WILL_FAIL "true") ENDIF (NOT ${resultcode} STREQUAL "0") @@ -368,14 +348,14 @@ IF (BUILD_TESTING) ADD_TEST ( NAME H5DIFF-clear-${resultfile}-objects COMMAND ${CMAKE_COMMAND} - -E remove ${resultfile}.out ${resultfile}.out.err + -E remove ./testfiles/${resultfile}.out ./testfiles/${resultfile}.out.err ) ADD_TEST ( NAME H5DIFF-${resultfile} COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=$" -D "TEST_ARGS:STRING=${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" -D "TEST_OUTPUT=${resultfile}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_REFERENCE=${resultfile}.txt" @@ -393,6 +373,7 @@ IF (BUILD_TESTING) # If using memchecker add tests without using scripts IF (HDF5_ENABLE_USING_MEMCHECKER) ADD_TEST (NAME PH5DIFF-${resultfile} COMMAND $ ${MPIEXEC} ${MPIEXEC_PREFLAGS} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_POSTFLAGS} ${ARGN}) + SET_TESTS_PROPERTIES (PH5DIFF-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") IF (NOT ${resultcode} STREQUAL "0") SET_TESTS_PROPERTIES (PH5DIFF-${resultfile} PROPERTIES WILL_FAIL "true") ENDIF (NOT ${resultcode} STREQUAL "0") @@ -404,14 +385,14 @@ IF (BUILD_TESTING) ADD_TEST ( NAME PH5DIFF-clear-${resultfile}-objects COMMAND ${CMAKE_COMMAND} - -E remove ${resultfile}_p.out ${resultfile}_p.out.err + -E remove ./testfiles/${resultfile}_p.out ./testfiles/${resultfile}_p.out.err ) ADD_TEST ( NAME PH5DIFF-${resultfile} COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=${MPIEXEC};${MPIEXEC_PREFLAGS};${MPIEXEC_NUMPROC_FLAG};${MPIEXEC_MAX_NUMPROCS};${MPIEXEC_POSTFLAGS};$" -D "TEST_ARGS:STRING=${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" -D "TEST_OUTPUT=P_${resultfile}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_REFERENCE=${resultfile}.txt" @@ -433,7 +414,7 @@ IF (BUILD_TESTING) ADD_TEST ( NAME H5DIFF-clear-${testname}-objects COMMAND ${CMAKE_COMMAND} - -E remove ${testname}.out ${testname}.out.err + -E remove ./testfiles/${testname}.out ./testfiles/${testname}.out.err ) # if there was a previous test IF (NOT "${last_test}" STREQUAL "") @@ -683,6 +664,16 @@ IF (BUILD_TESTING) h5diff_468.out.err h5diff_469.out h5diff_469.out.err + h5diff_471.out + h5diff_471.out.err + h5diff_472.out + h5diff_472.out.err + h5diff_473.out + h5diff_473.out.err + h5diff_474.out + h5diff_474.out.err + h5diff_475.out + h5diff_475.out.err h5diff_480.out h5diff_480.out.err h5diff_481.out @@ -850,6 +841,7 @@ IF (BUILD_TESTING) h5diff_90.out h5diff_90.out.err ) + SET_TESTS_PROPERTIES (H5DIFF-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5DIFF-clearall-objects PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") @@ -1309,6 +1301,18 @@ ADD_H5_TEST (h5diff_468 0 -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_dan # ext link vs. ext dangling ADD_H5_TEST (h5diff_469 1 -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link2) +#--------------------------------------------------- +# dangling links without follow symlink +# (HDFFV-7998) +# test - soft dangle links (same and different paths), +# - external dangle links (same and different paths) +ADD_H5_TEST (h5diff_471 1 -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5) +ADD_H5_TEST (h5diff_472 0 -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link1) +ADD_H5_TEST (h5diff_473 1 -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link4) +ADD_H5_TEST (h5diff_474 0 -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link4) +ADD_H5_TEST (h5diff_475 1 -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link1) + + # ############################################################################## # # test for group diff recursivly # ############################################################################## @@ -1424,21 +1428,27 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5diff ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5diff RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) IF (H5_HAVE_PARALLEL) + + INSTALL_PROGRAM_PDB (ph5diff ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS ph5diff RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5diff/h5diffgentest.c b/tools/h5diff/h5diffgentest.c index eb4931d..8b62d38 100644 --- a/tools/h5diff/h5diffgentest.c +++ b/tools/h5diff/h5diffgentest.c @@ -2282,6 +2282,14 @@ static int test_dangle_links(const char *fname1, const char *fname2) goto out; } + status = H5Lcreate_soft("no_obj1", fid1, "soft_link4", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s> H5Lcreate_soft failed.\n", fname1); + status = FAIL; + goto out; + } + /* file 2 */ status = H5Lcreate_soft("no_obj", fid2, "soft_link1", H5P_DEFAULT, H5P_DEFAULT); if (status < 0) @@ -2307,6 +2315,14 @@ static int test_dangle_links(const char *fname1, const char *fname2) goto out; } + status = H5Lcreate_soft("no_obj2", fid2, "soft_link4", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s> H5Lcreate_soft failed.\n", fname2); + status = FAIL; + goto out; + } + /*----------------------------------------------------------------------- * External Links *------------------------------------------------------------------------*/ diff --git a/tools/h5diff/testfiles/h5diff_450.txt b/tools/h5diff/testfiles/h5diff_450.txt index bf4f6e9..a63d78f 100644 --- a/tools/h5diff/testfiles/h5diff_450.txt +++ b/tools/h5diff/testfiles/h5diff_450.txt @@ -11,6 +11,7 @@ file1 file2 x x /soft_link1 x x /soft_link2 x x /soft_link3 + x x /soft_link4 group : and 0 differences found @@ -32,4 +33,6 @@ obj2 is a dangling link. 1 differences found obj1 is a dangling link. 1 differences found +dangling link: and +0 differences found EXIT CODE: 1 diff --git a/tools/h5diff/testfiles/h5diff_451.txt b/tools/h5diff/testfiles/h5diff_451.txt index 0d30023..fd0691f 100644 --- a/tools/h5diff/testfiles/h5diff_451.txt +++ b/tools/h5diff/testfiles/h5diff_451.txt @@ -11,6 +11,7 @@ file1 file2 x x /soft_link1 x x /soft_link2 x x /soft_link3 + x x /soft_link4 group : and 0 differences found @@ -25,4 +26,5 @@ Warning: is a dangling link. Warning: is a dangling link. Warning: is a dangling link. Warning: is a dangling link. +Warning: is a dangling link. EXIT CODE: 2 diff --git a/tools/h5diff/testfiles/h5diff_471.txt b/tools/h5diff/testfiles/h5diff_471.txt new file mode 100644 index 0000000..124cdd7 --- /dev/null +++ b/tools/h5diff/testfiles/h5diff_471.txt @@ -0,0 +1,38 @@ + +file1 file2 +--------------------------------------- + x x / + x x /dset1 + x x /dset2 + x x /ext_link1 + x x /ext_link2 + x x /ext_link3 + x x /ext_link4 + x x /soft_link1 + x x /soft_link2 + x x /soft_link3 + x x /soft_link4 + +group : and +0 differences found +dataset: and +0 differences found +dataset: and +0 differences found +external link: and +1 differences found +external link: and +1 differences found +external link: and +1 differences found +external link: and +0 differences found +link : and +0 differences found +link : and +1 differences found +link : and +1 differences found +link : and +1 differences found +EXIT CODE: 1 diff --git a/tools/h5diff/testfiles/h5diff_472.txt b/tools/h5diff/testfiles/h5diff_472.txt new file mode 100644 index 0000000..57a8af4 --- /dev/null +++ b/tools/h5diff/testfiles/h5diff_472.txt @@ -0,0 +1,3 @@ +link : and +0 differences found +EXIT CODE: 0 diff --git a/tools/h5diff/testfiles/h5diff_473.txt b/tools/h5diff/testfiles/h5diff_473.txt new file mode 100644 index 0000000..4c1855d --- /dev/null +++ b/tools/h5diff/testfiles/h5diff_473.txt @@ -0,0 +1,3 @@ +link : and +1 differences found +EXIT CODE: 1 diff --git a/tools/h5diff/testfiles/h5diff_474.txt b/tools/h5diff/testfiles/h5diff_474.txt new file mode 100644 index 0000000..7807551 --- /dev/null +++ b/tools/h5diff/testfiles/h5diff_474.txt @@ -0,0 +1,3 @@ +external link: and +0 differences found +EXIT CODE: 0 diff --git a/tools/h5diff/testfiles/h5diff_475.txt b/tools/h5diff/testfiles/h5diff_475.txt new file mode 100644 index 0000000..be6110e --- /dev/null +++ b/tools/h5diff/testfiles/h5diff_475.txt @@ -0,0 +1,3 @@ +external link: and +1 differences found +EXIT CODE: 1 diff --git a/tools/h5diff/testh5diff.sh b/tools/h5diff/testh5diff.sh index c84c2b6..ef472bb 100755 --- a/tools/h5diff/testh5diff.sh +++ b/tools/h5diff/testh5diff.sh @@ -211,6 +211,11 @@ $SRC_H5DIFF_TESTFILES/h5diff_466.txt $SRC_H5DIFF_TESTFILES/h5diff_467.txt $SRC_H5DIFF_TESTFILES/h5diff_468.txt $SRC_H5DIFF_TESTFILES/h5diff_469.txt +$SRC_H5DIFF_TESTFILES/h5diff_471.txt +$SRC_H5DIFF_TESTFILES/h5diff_472.txt +$SRC_H5DIFF_TESTFILES/h5diff_473.txt +$SRC_H5DIFF_TESTFILES/h5diff_474.txt +$SRC_H5DIFF_TESTFILES/h5diff_475.txt $SRC_H5DIFF_TESTFILES/h5diff_480.txt $SRC_H5DIFF_TESTFILES/h5diff_481.txt $SRC_H5DIFF_TESTFILES/h5diff_482.txt @@ -978,6 +983,17 @@ TOOLTEST h5diff_468.txt -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_dangl # ext link vs. ext dangling TOOLTEST h5diff_469.txt -v --follow-symlinks h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link2 +#---------------------------------------- +# dangling links without follow symlink +# (HDFFV-7998) +# test - soft dangle links (same and different paths), +# - external dangle links (same and different paths) +TOOLTEST h5diff_471.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 +TOOLTEST h5diff_472.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link1 +TOOLTEST h5diff_473.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /soft_link4 +TOOLTEST h5diff_474.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link4 +TOOLTEST h5diff_475.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link1 + # ############################################################################## # # test for group diff recursivly # ############################################################################## diff --git a/tools/h5dump/CMakeLists.txt b/tools/h5dump/CMakeLists.txt index a6e452d..3bc481d 100644 --- a/tools/h5dump/CMakeLists.txt +++ b/tools/h5dump/CMakeLists.txt @@ -43,6 +43,7 @@ IF (BUILD_TESTING) # Copy all the HDF5 files from the test directory into the source directory # -------------------------------------------------------------------- SET (HDF5_REFERENCE_FILES + charsets.ddl file_space.ddl filter_fail.ddl packedbits.ddl @@ -65,6 +66,7 @@ IF (BUILD_TESTING) tarray7.ddl tarray8.ddl tattr-1.ddl + tattrintsize.ddl tattr-2.ddl tattr-3.ddl tattr-4_be.ddl @@ -81,6 +83,8 @@ IF (BUILD_TESTING) tboot2.ddl tchar1.ddl tchunked.ddl + tcmpdattrintsize.ddl + tcmpdintsize.ddl tcomp-1.ddl tcomp-2.ddl tcomp-3.ddl @@ -239,6 +243,7 @@ IF (BUILD_TESTING) tvlstr.h5.xml ) SET (HDF5_REFERENCE_TEST_FILES + charsets.h5 file_space.h5 filter_fail.h5 packedbits.h5 @@ -256,10 +261,13 @@ IF (BUILD_TESTING) tattr.h5 tattr2.h5 tattr4_be.h5 + tattrintsize.h5 tattrreg.h5 tbigdims.h5 tbinary.h5 tchar.h5 + tcmpdattrintsize.h5 + tcmpdintsize.h5 tcompound.h5 tcompound_complex.h5 tdatareg.h5 @@ -676,6 +684,8 @@ IF (BUILD_TESTING) COMMAND ${CMAKE_COMMAND} -E remove h5dump-help.out + charsets.out + charsets.out.err file_space.out file_space.out.err filter_fail.out @@ -726,6 +736,8 @@ IF (BUILD_TESTING) tattr-3.out.err tattr-4_be.out tattr-4_be.out.err + tattrintsize.out + tattrintsize.out.err tattrreg.out tattrreg.out.err tattrregR.out @@ -742,6 +754,10 @@ IF (BUILD_TESTING) tchar1.out.err tchunked.out tchunked.out.err + tcmpdattrintsize.out + tcmpdattrintsize.out.err + tcmpdintsize.out + tcmpdintsize.out.err tcomp-1.out tcomp-1.out.err tcomp-2.out @@ -931,6 +947,12 @@ IF (BUILD_TESTING) # test for signed/unsigned datasets ADD_H5_TEST (packedbits 0 --enable-error-stack packedbits.h5) + # test for compound signed/unsigned datasets + ADD_H5_TEST (tcmpdintsize 0 --enable-error-stack tcmpdintsize.h5) + # test for signed/unsigned attributes + ADD_H5_TEST (tattrintsize 0 --enable-error-stack tattrintsize.h5) + # test for compound signed/unsigned attributes + ADD_H5_TEST (tcmpdattrintsize 0 --enable-error-stack tcmpdattrintsize.h5) # test for displaying groups ADD_H5_TEST (tgroup-1 0 --enable-error-stack tgroup.h5) # test for displaying the selected groups @@ -1060,6 +1082,9 @@ IF (BUILD_TESTING) # test printing characters in ASCII instead of decimal ADD_H5_TEST (tchar1 0 --enable-error-stack -r tchar.h5) + # test datatypes in ASCII and UTF8 + ADD_H5_TEST (charsets 0 --enable-error-stack charsets.h5) + # rev. 2004 # tests for super block ADD_H5_TEST (tboot1 0 --enable-error-stack -H -B -d dset tfcontents1.h5) @@ -1750,11 +1775,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5dump ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5dump RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5dump/Makefile.am b/tools/h5dump/Makefile.am index 97d81c2..38864f5 100644 --- a/tools/h5dump/Makefile.am +++ b/tools/h5dump/Makefile.am @@ -25,7 +25,7 @@ INCLUDES=-I$(top_srcdir)/src -I$(top_srcdir)/tools/lib # Test programs and scripts TEST_PROG=h5dumpgentest -TEST_SCRIPT=testh5dump.sh testh5dumpxml.sh +TEST_SCRIPT=testh5dump.sh testh5dumppbits.sh testh5dumpxml.sh check_PROGRAMS=$(TEST_PROG) binread check_SCRIPTS=$(TEST_SCRIPT) diff --git a/tools/h5dump/Makefile.in b/tools/h5dump/Makefile.in index 9d46557..0c45a72 100644 --- a/tools/h5dump/Makefile.in +++ b/tools/h5dump/Makefile.in @@ -52,8 +52,8 @@ POST_UNINSTALL = : build_triplet = @build@ host_triplet = @host@ DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \ - $(srcdir)/testh5dump.sh.in $(srcdir)/testh5dumpxml.sh.in \ - $(top_srcdir)/config/commence.am \ + $(srcdir)/testh5dump.sh.in $(srcdir)/testh5dumppbits.sh.in \ + $(srcdir)/testh5dumpxml.sh.in $(top_srcdir)/config/commence.am \ $(top_srcdir)/config/conclude.am check_PROGRAMS = $(am__EXEEXT_1) binread$(EXEEXT) bin_PROGRAMS = h5dump$(EXEEXT) @@ -65,7 +65,7 @@ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ $(ACLOCAL_M4) mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs CONFIG_HEADER = $(top_builddir)/src/H5config.h -CONFIG_CLEAN_FILES = testh5dump.sh testh5dumpxml.sh +CONFIG_CLEAN_FILES = testh5dump.sh testh5dumppbits.sh testh5dumpxml.sh CONFIG_CLEAN_VPATH_FILES = am__installdirs = "$(DESTDIR)$(bindir)" am__EXEEXT_1 = h5dumpgentest$(EXEEXT) @@ -412,7 +412,7 @@ INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/tools/lib # Test programs and scripts TEST_PROG = h5dumpgentest -TEST_SCRIPT = testh5dump.sh testh5dumpxml.sh +TEST_SCRIPT = testh5dump.sh testh5dumppbits.sh testh5dumpxml.sh check_SCRIPTS = $(TEST_SCRIPT) SCRIPT_DEPEND = h5dump$(EXEEXT) @@ -424,7 +424,7 @@ LDADD = $(LIBH5TOOLS) $(LIBHDF5) # Source files for the program h5dump_SOURCES = h5dump.c h5dump_ddl.c h5dump_xml.c -DISTCLEANFILES = testh5dump.sh +DISTCLEANFILES = testh5dump.sh testh5dumppbits.sh testh5dumpxml.sh # Automake needs to be taught how to build lib, progs, and tests targets. # These will be filled in automatically for the most part (e.g., @@ -477,6 +477,8 @@ $(ACLOCAL_M4): @MAINTAINER_MODE_TRUE@ $(am__aclocal_m4_deps) $(am__aclocal_m4_deps): testh5dump.sh: $(top_builddir)/config.status $(srcdir)/testh5dump.sh.in cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ +testh5dumppbits.sh: $(top_builddir)/config.status $(srcdir)/testh5dumppbits.sh.in + cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ testh5dumpxml.sh: $(top_builddir)/config.status $(srcdir)/testh5dumpxml.sh.in cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ install-binPROGRAMS: $(bin_PROGRAMS) diff --git a/tools/h5dump/h5dump_xml.c b/tools/h5dump/h5dump_xml.c index e6f8043..1b247f1 100644 --- a/tools/h5dump/h5dump_xml.c +++ b/tools/h5dump/h5dump_xml.c @@ -1883,9 +1883,7 @@ xml_dump_data(hid_t obj_id, int obj_data, struct subset_t UNUSED * sset, int UNU p_type = h5tools_get_native_type(type); /* Check if we have VL data in the dataset's datatype */ - if (h5tools_detect_vlen_str(p_type) == TRUE) - vl_data = TRUE; - if (H5Tdetect_class(p_type, H5T_VLEN) == TRUE) + if (h5tools_detect_vlen(p_type) == TRUE) vl_data = TRUE; H5Tclose(type); @@ -2952,7 +2950,7 @@ xml_print_refs(hid_t did, int source) string_dataformat.do_escape = display_escape; outputformat = &string_dataformat; - for (i = 0; i < ssiz; i++) { + for (i = 0; i < (hsize_t)ssiz; i++) { const char *path = lookup_ref_path(*refbuf); ctx.indent_level++; diff --git a/tools/h5dump/h5dumpgentest.c b/tools/h5dump/h5dumpgentest.c index 4114a94..a37f908 100644 --- a/tools/h5dump/h5dumpgentest.c +++ b/tools/h5dump/h5dumpgentest.c @@ -97,10 +97,11 @@ #define FILE65 "file_space.h5" #define FILE66 "packedbits.h5" #define FILE67 "zerodim.h5" -#define FILE68 "tdset_idx.h5" - - - +#define FILE68a "tdset_idx.h5" +#define FILE68 "charsets.h5" +#define FILE69 "tattrintsize.h5" +#define FILE70 "tcmpdintsize.h5" +#define FILE71 "tcmpdattrintsize.h5" /*------------------------------------------------------------------------- * prototypes @@ -262,22 +263,22 @@ typedef struct s1_t { #define THRESHOLD10 10 /* Free space section threshold */ /* "FILE66" macros */ -#define F66_XDIM 8 +#define F66_XDIM 8 #define F66_DATASETU08 "DU08BITS" #define F66_DATASETS08 "DS08BITS" -#define F66_YDIM8 8 +#define F66_YDIM8 8 #define F66_DATASETU16 "DU16BITS" #define F66_DATASETS16 "DS16BITS" -#define F66_YDIM16 16 +#define F66_YDIM16 16 #define F66_DATASETU32 "DU32BITS" #define F66_DATASETS32 "DS32BITS" -#define F66_YDIM32 32 +#define F66_YDIM32 32 #define F66_DATASETU64 "DU64BITS" #define F66_DATASETS64 "DS64BITS" #define F66_YDIM64 64 -#define F66_DUMMYDBL "DummyDBL" +#define F66_DUMMYDBL "DummyDBL" -/* Declarations for gent_dataset_idx() for "FILE68" */ +/* Declarations for gent_dataset_idx() for "FILE68a" */ #define DSET_FIXED "dset_fixed" #define DSET_FIXED_FILTER "dset_filter" #define DSET_BTREE "dset_btree" @@ -287,6 +288,29 @@ typedef struct s1_t { #define DIM10 10 #define CHUNK 5 +/* "FILE70" macros and for FILE71 */ +/* Name of dataset to create in datafile */ +#define F70_DATASETNAME "CompoundIntSize" +#define F70_LENGTH 4 +#define F70_RANK 1 +#define F70_ARRAY_RANK 2 +#define F70_XDIM 8 +#define F70_DATASETU08 "DU08BITS" +#define F70_DATASETS08 "DS08BITS" +#define F70_YDIM8 8 +#define F70_DATASETU16 "DU16BITS" +#define F70_DATASETS16 "DS16BITS" +#define F70_YDIM16 16 +#define F70_DATASETU32 "DU32BITS" +#define F70_DATASETS32 "DS32BITS" +#define F70_YDIM32 32 +#define F70_DATASETU64 "DU64BITS" +#define F70_DATASETS64 "DS64BITS" +#define F70_YDIM64 64 +#define F70_DUMMYDBL "DummyDBL" +/* Name of dataset to create in datafile */ +#define F71_DATASETNAME "CompoundAttrIntSize" + static void gent_group(void) { @@ -586,7 +610,7 @@ static int gent_softlink2(void) */ /* Create a new dataset as sample object */ dset1 = H5Dcreate2(fileid1, "/dset1", H5T_NATIVE_INT, dataspace, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (dset1 < 0) { fprintf(stderr, "Error: %s> H5Dcreate2 failed.\n", FILE4_1); @@ -607,7 +631,7 @@ static int gent_softlink2(void) */ /* Create a new dataset as sample object */ dset2 = H5Dcreate2(fileid1, "/dset2", H5T_NATIVE_INT, dataspace, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (dset2 < 0) { fprintf(stderr, "Error: %s> H5Dcreate2 failed.\n", FILE4_1); @@ -3354,7 +3378,7 @@ static void gent_array8(void) hsize_t sdims[] = {F64_DIM0}; hsize_t tdims[] = {F64_DIM1}; int wdata[(F64_DIM1) * sizeof(int)]; /* Write buffer */ - unsigned int i; + unsigned int i; /* * Initialize data. i is the element in the dataspace, j and k the @@ -6982,7 +7006,7 @@ gent_dataset_idx(void) ret = H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST); assert(ret >= 0); - fid = H5Fcreate(FILE68, H5F_ACC_TRUNC, H5P_DEFAULT, fapl); + fid = H5Fcreate(FILE68a, H5F_ACC_TRUNC, H5P_DEFAULT, fapl); dcpl = H5Pcreate(H5P_DATASET_CREATE); dims[0] = CHUNK; @@ -7040,8 +7064,8 @@ gent_dataset_idx(void) * Function: gent_packedbits * * Purpose: Generate a file to be used in the h5dump packed bits tests. - * Three datasets of 1, 2 and 4 bytes of unsigned int types are created. - * Three more datasets of 1, 2 and 4 bytes of signed int types are created. + * Four datasets of 1, 2, 4 and 8 bytes of unsigned int types are created. + * Four more datasets of 1, 2, 4 and 8 bytes of signed int types are created. * Fill them with raw data such that no bit will be all zero in a dataset. * A dummy dataset of double type is created for failure test. * Created: Albert Cheng, 2010/5/10. @@ -7073,11 +7097,11 @@ gent_packedbits(void) valu8bits = (uint8_t) ~0u; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dsetu8[i][0] = valu8bits; - for(j = 1; j < dims[1]; j++) { + dsetu8[i][0] = valu8bits; + for(j = 1; j < dims[1]; j++) { dsetu8[i][j] = dsetu8[i][j-1] << 1; - } - valu8bits <<= 1; + } + valu8bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_UINT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); @@ -7089,13 +7113,13 @@ gent_packedbits(void) space = H5Screate_simple(2, dims, NULL); dataset = H5Dcreate2(fid, F66_DATASETU16, H5T_STD_U16LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - valu16bits = (uint16_t) ~0u; /* all 1s */ + valu16bits = (uint16_t) ~0u; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dsetu16[i][0] = valu16bits; - for(j = 1; j < dims[1]; j++) { + dsetu16[i][0] = valu16bits; + for(j = 1; j < dims[1]; j++) { dsetu16[i][j] = dsetu16[i][j-1] << 1; - } - valu16bits <<= 1; + } + valu16bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_UINT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); @@ -7107,13 +7131,13 @@ gent_packedbits(void) space = H5Screate_simple(2, dims, NULL); dataset = H5Dcreate2(fid, F66_DATASETU32, H5T_STD_U32LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - valu32bits = (uint32_t) ~0u; /* all 1s */ + valu32bits = (uint32_t) ~0u; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dsetu32[i][0] = valu32bits; - for(j = 1; j < dims[1]; j++) { + dsetu32[i][0] = valu32bits; + for(j = 1; j < dims[1]; j++) { dsetu32[i][j] = dsetu32[i][j-1] << 1; - } - valu32bits <<= 1; + } + valu32bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_UINT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); @@ -7127,11 +7151,11 @@ gent_packedbits(void) valu64bits = (uint64_t) ~0Lu; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dsetu64[i][0] = valu64bits; - for(j = 1; j < dims[1]; j++) { + dsetu64[i][0] = valu64bits; + for(j = 1; j < dims[1]; j++) { dsetu64[i][j] = dsetu64[i][j-1] << 1; - } - valu64bits <<= 1; + } + valu64bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_UINT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); @@ -7143,13 +7167,13 @@ gent_packedbits(void) space = H5Screate_simple(2, dims, NULL); dataset = H5Dcreate2(fid, F66_DATASETS08, H5T_STD_I8LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - val8bits = (int8_t) ~0; /* all 1s */ + val8bits = (int8_t) ~0; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dset8[i][0] = val8bits; - for(j = 1; j < dims[1]; j++) { + dset8[i][0] = val8bits; + for(j = 1; j < dims[1]; j++) { dset8[i][j] = dset8[i][j-1] << 1; - } - val8bits <<= 1; + } + val8bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_INT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); @@ -7161,13 +7185,13 @@ gent_packedbits(void) space = H5Screate_simple(2, dims, NULL); dataset = H5Dcreate2(fid, F66_DATASETS16, H5T_STD_I16LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - val16bits = (int16_t) ~0; /* all 1s */ + val16bits = (int16_t) ~0; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dset16[i][0] = val16bits; - for(j = 1; j < dims[1]; j++) { + dset16[i][0] = val16bits; + for(j = 1; j < dims[1]; j++) { dset16[i][j] = dset16[i][j-1] << 1; - } - val16bits <<= 1; + } + val16bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_INT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); @@ -7179,13 +7203,13 @@ gent_packedbits(void) space = H5Screate_simple(2, dims, NULL); dataset = H5Dcreate2(fid, F66_DATASETS32, H5T_STD_I32LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); - val32bits = (int32_t) ~0; /* all 1s */ + val32bits = (int32_t) ~0; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dset32[i][0] = val32bits; - for(j = 1; j < dims[1]; j++) { + dset32[i][0] = val32bits; + for(j = 1; j < dims[1]; j++) { dset32[i][j] = dset32[i][j-1] << 1; - } - val32bits <<= 1; + } + val32bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_INT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); @@ -7199,11 +7223,11 @@ gent_packedbits(void) val64bits = (int64_t) ~0L; /* all 1s */ for(i = 0; i < dims[0]; i++){ - dset64[i][0] = val64bits; - for(j = 1; j < dims[1]; j++) { + dset64[i][0] = val64bits; + for(j = 1; j < dims[1]; j++) { dset64[i][j] = dset64[i][j-1] << 1; - } - val64bits <<= 1; + } + val64bits <<= 1; } H5Dwrite(dataset, H5T_NATIVE_INT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); @@ -7227,6 +7251,798 @@ gent_packedbits(void) } /*------------------------------------------------------------------------- + * Function: gent_attr_packedbits + * + * Purpose: Generate a file to be used in the h5dump packed bits tests. + * Four attributes of 1, 2, 4 and 8 bytes of unsigned int types are created. + * Four more datasets of 1, 2, 4 and 8 bytes of signed int types are created. + * Fill them with raw data such that no bit will be all zero in a dataset. + * A dummy dataset of double type is created for failure test. + * Use file to test Signed/Unsigned datatypes and keep in sync with gent_packedbits() + *------------------------------------------------------------------------- + */ +static void +gent_attr_intsize(void) +{ + hid_t fid, attr, space, root; + hsize_t dims[2]; + uint8_t dsetu8[F66_XDIM][F66_YDIM8], valu8bits; + uint16_t dsetu16[F66_XDIM][F66_YDIM16], valu16bits; + uint32_t dsetu32[F66_XDIM][F66_YDIM32], valu32bits; + uint64_t dsetu64[F66_XDIM][F66_YDIM64], valu64bits; + int8_t dset8[F66_XDIM][F66_YDIM8], val8bits; + int16_t dset16[F66_XDIM][F66_YDIM16], val16bits; + int32_t dset32[F66_XDIM][F66_YDIM32], val32bits; + int64_t dset64[F66_XDIM][F66_YDIM64], val64bits; + double dsetdbl[F66_XDIM][F66_YDIM8]; + unsigned int i, j; + + fid = H5Fcreate(FILE69, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + root = H5Gopen2(fid, "/", H5P_DEFAULT); + + /* Attribute of 8 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM8; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETU08, H5T_STD_U8LE, space, H5P_DEFAULT, H5P_DEFAULT); + + valu8bits = (uint8_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu8[i][0] = valu8bits; + for(j = 1; j < dims[1]; j++) { + dsetu8[i][j] = dsetu8[i][j-1] << 1; + } + valu8bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_UINT8, dsetu8); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 16 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM16; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETU16, H5T_STD_U16LE, space, H5P_DEFAULT, H5P_DEFAULT); + + valu16bits = (uint16_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu16[i][0] = valu16bits; + for(j = 1; j < dims[1]; j++) { + dsetu16[i][j] = dsetu16[i][j-1] << 1; + } + valu16bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_UINT16, dsetu16); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 32 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM32; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETU32, H5T_STD_U32LE, space, H5P_DEFAULT, H5P_DEFAULT); + + valu32bits = (uint32_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu32[i][0] = valu32bits; + for(j = 1; j < dims[1]; j++) { + dsetu32[i][j] = dsetu32[i][j-1] << 1; + } + valu32bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_UINT32, dsetu32); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 64 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM64; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETU64, H5T_STD_U64LE, space, H5P_DEFAULT, H5P_DEFAULT); + + valu64bits = (uint64_t) ~0Lu; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu64[i][0] = valu64bits; + for(j = 1; j < dims[1]; j++) { + dsetu64[i][j] = dsetu64[i][j-1] << 1; + } + valu64bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_UINT64, dsetu64); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 8 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM8; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETS08, H5T_STD_I8LE, space, H5P_DEFAULT, H5P_DEFAULT); + + val8bits = (int8_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset8[i][0] = val8bits; + for(j = 1; j < dims[1]; j++) { + dset8[i][j] = dset8[i][j-1] << 1; + } + val8bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_INT8, dset8); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 16 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM16; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETS16, H5T_STD_I16LE, space, H5P_DEFAULT, H5P_DEFAULT); + + val16bits = (int16_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset16[i][0] = val16bits; + for(j = 1; j < dims[1]; j++) { + dset16[i][j] = dset16[i][j-1] << 1; + } + val16bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_INT16, dset16); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 32 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM32; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETS32, H5T_STD_I32LE, space, H5P_DEFAULT, H5P_DEFAULT); + + val32bits = (int32_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset32[i][0] = val32bits; + for(j = 1; j < dims[1]; j++) { + dset32[i][j] = dset32[i][j-1] << 1; + } + val32bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_INT32, dset32); + H5Sclose(space); + H5Aclose(attr); + + /* Attribute of 64 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM64; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DATASETS64, H5T_STD_I64LE, space, H5P_DEFAULT, H5P_DEFAULT); + + val64bits = (int64_t) ~0L; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset64[i][0] = val64bits; + for(j = 1; j < dims[1]; j++) { + dset64[i][j] = dset64[i][j-1] << 1; + } + val64bits <<= 1; + } + + H5Awrite(attr, H5T_NATIVE_INT64, dset64); + H5Sclose(space); + H5Aclose(attr); + + /* Double Dummy set for failure tests */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM8; + space = H5Screate_simple(2, dims, NULL); + attr = H5Acreate2(root, F66_DUMMYDBL, H5T_IEEE_F64BE, space, H5P_DEFAULT, H5P_DEFAULT); + + for(i = 0; i < dims[0]; i++) + for(j = 0; j < dims[1]; j++) + dsetdbl[i][j] = 0.0001 * j + i; + + H5Awrite(attr, H5T_NATIVE_DOUBLE, dsetdbl); + + H5Sclose(space); + H5Aclose(attr); + + H5Gclose(root); + H5Fclose(fid); +} + +/*------------------------------------------------------------------------- + * Function: gent_charsets + * + * Purpose: Generate a file to be used in the character set test + * Contains: + * 1) a ascii datatype + * 2) a utf8 datatype + * + *------------------------------------------------------------------------- + */ +static void +gent_charsets(void) +{ + hid_t fid, did, sid; + herr_t status; + hsize_t dim[] = {1}; /* Dataspace dimensions */ + typedef struct CharSetInfo { + const char *ascii_p_; + const char *utf8_p_; + } CharSetInfo; + + sid = H5Screate_simple( 1, dim, NULL ); + fid = H5Fcreate( FILE68, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT ); + + hid_t charset_dtid = H5Tcreate( H5T_COMPOUND, sizeof( CharSetInfo ) ); + + hid_t ascii_dtid = H5Tcreate( H5T_STRING, H5T_VARIABLE ); + status = H5Tset_cset( ascii_dtid, H5T_CSET_ASCII ); + H5Tinsert( charset_dtid, "ascii", HOFFSET(CharSetInfo, ascii_p_ ), ascii_dtid ); + + hid_t utf8_dtid = H5Tcreate( H5T_STRING, H5T_VARIABLE ); + status = H5Tset_cset( utf8_dtid, H5T_CSET_UTF8 ); + H5Tinsert( charset_dtid, "utf8", HOFFSET( CharSetInfo, utf8_p_ ), utf8_dtid ); + + did = H5Dcreate2( fid, "CharSets", charset_dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT ); + + const char * writeData[] = { "ascii", "utf8", }; + status = H5Dwrite( did, charset_dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, writeData ); + + H5Tclose( charset_dtid ); + H5Tclose( ascii_dtid ); + H5Tclose( utf8_dtid ); + H5Sclose( sid ); + H5Dclose( did ); + H5Fclose( fid ); +} + +static void gent_compound_intsizes(void) { + hid_t fid, dataset, space, root; + hsize_t dims[2]; + hsize_t array_dim8[]={F70_XDIM,F70_YDIM8}; /* Array dimensions */ + hsize_t array_dim16[]={F70_XDIM,F70_YDIM16}; /* Array dimensions */ + hsize_t array_dim32[]={F70_XDIM,F70_YDIM32}; /* Array dimensions */ + hsize_t array_dim64[]={F70_XDIM,F70_YDIM64}; /* Array dimensions */ + hid_t arrayu8_tid; /* Array datatype handle */ + hid_t arrayu16_tid; /* Array datatype handle */ + hid_t arrayu32_tid; /* Array datatype handle */ + hid_t arrayu64_tid; /* Array datatype handle */ + hid_t array8_tid; /* Array datatype handle */ + hid_t array16_tid; /* Array datatype handle */ + hid_t array32_tid; /* Array datatype handle */ + hid_t array64_tid; /* Array datatype handle */ + hid_t arraydbl_tid; /* Array datatype handle */ + uint8_t valu8bits; + uint16_t valu16bits; + uint32_t valu32bits; + uint64_t valu64bits; + int8_t val8bits; + int16_t val16bits; + int32_t val32bits; + int64_t val64bits; + /* Structure and array for compound types */ + typedef struct Array1Struct { + uint8_t dsetu8[F70_XDIM][F70_YDIM8]; + uint16_t dsetu16[F70_XDIM][F70_YDIM16]; + uint32_t dsetu32[F70_XDIM][F70_YDIM32]; + uint64_t dsetu64[F70_XDIM][F70_YDIM64]; + int8_t dset8[F70_XDIM][F70_YDIM8]; + int16_t dset16[F70_XDIM][F70_YDIM16]; + int32_t dset32[F70_XDIM][F70_YDIM32]; + int64_t dset64[F70_XDIM][F70_YDIM64]; + double dsetdbl[F70_XDIM][F70_YDIM8]; + } Array1Struct; + Array1Struct Array1[F70_LENGTH]; + + hid_t Array1Structid; /* File datatype identifier */ + herr_t status; /* Error checking variable */ + hsize_t dim[] = { F70_LENGTH }; /* Dataspace dimensions */ + + int m, n, o; /* Array init loop vars */ + + /* Initialize the data in the arrays/datastructure */ + for (m = 0; m < F70_LENGTH; m++) { + + /* Array of 8 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM8; + + valu8bits = (uint8_t) ~0u; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu8[n][0] = valu8bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu8[n][o] = Array1[m].dsetu8[n][o-1] << 1; + } + valu8bits <<= 1; + } + + /* Array of 16 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM16; + + valu16bits = (uint16_t) ~0u; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu16[n][0] = valu16bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu16[n][o] = Array1[m].dsetu16[n][o-1] << 1; + } + valu16bits <<= 1; + } + + /* Array of 32 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM32; + + valu32bits = (uint32_t) ~0u; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu32[n][0] = valu32bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu32[n][o] = Array1[m].dsetu32[n][o-1] << 1; + } + valu32bits <<= 1; + } + + /* Array of 64 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM64; + + valu64bits = (uint64_t) ~0Lu; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu64[n][0] = valu64bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu64[n][o] = Array1[m].dsetu64[n][o-1] << 1; + } + valu64bits <<= 1; + } + + /* Array of 8 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM8; + + val8bits = (int8_t) ~0; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset8[n][0] = val8bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset8[n][o] = Array1[m].dset8[n][o-1] << 1; + } + val8bits <<= 1; + } + + /* Array of 16 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM16; + + val16bits = (int16_t) ~0; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset16[n][0] = val16bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset16[n][o] = Array1[m].dset16[n][o-1] << 1; + } + val16bits <<= 1; + } + + /* Array of 32 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM32; + + val32bits = (int32_t) ~0; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset32[n][0] = val32bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset32[n][o] = Array1[m].dset32[n][o-1] << 1; + } + val32bits <<= 1; + } + + /* Array of 64 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM64; + + val64bits = (int64_t) ~0L; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset64[n][0] = val64bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset64[n][o] = Array1[m].dset64[n][o-1] << 1; + } + val64bits <<= 1; + } + + /* Double Dummy set for failure tests */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM8; + + for(n = 0; n < dims[0]; n++) + for(o = 0; o < dims[1]; o++) + Array1[m].dsetdbl[n][o] = 0.0001 * o + n; + } + + /* Create the array data type for the 8 bits signed int array */ + array8_tid = H5Tarray_create2(H5T_NATIVE_SCHAR, F70_ARRAY_RANK, array_dim8); + HDassert(array8_tid >= 0); + + /* Create the array data type for the 16 bits signed int array */ + array16_tid = H5Tarray_create2(H5T_NATIVE_SHORT, F70_ARRAY_RANK, array_dim16); + HDassert(array16_tid >= 0); + + /* Create the array data type for the 32 bits signed int array */ + array32_tid = H5Tarray_create2(H5T_NATIVE_INT, F70_ARRAY_RANK, array_dim32); + HDassert(array32_tid >= 0); + + /* Create the array data type for the 64 bits signed int array */ + array64_tid = H5Tarray_create2(H5T_NATIVE_LONG, F70_ARRAY_RANK, array_dim64); + HDassert(array64_tid >= 0); + + /* Create the array data type for the 8 bits signed int array */ + arrayu8_tid = H5Tarray_create2(H5T_NATIVE_UCHAR, F70_ARRAY_RANK, array_dim8); + HDassert(arrayu8_tid >= 0); + + /* Create the array data type for the 16 bits signed int array */ + arrayu16_tid = H5Tarray_create2(H5T_NATIVE_USHORT, F70_ARRAY_RANK, array_dim16); + HDassert(arrayu16_tid >= 0); + + /* Create the array data type for the 32 bits signed int array */ + arrayu32_tid = H5Tarray_create2(H5T_NATIVE_UINT, F70_ARRAY_RANK, array_dim32); + HDassert(arrayu32_tid >= 0); + + /* Create the array data type for the 64 bits signed int array */ + arrayu64_tid = H5Tarray_create2(H5T_NATIVE_ULONG, F70_ARRAY_RANK, array_dim64); + HDassert(arrayu64_tid >= 0); + + /* Create the array data type for the 32 bits double array */ + arraydbl_tid = H5Tarray_create2(H5T_NATIVE_DOUBLE, F70_ARRAY_RANK, array_dim8); + HDassert(arraydbl_tid >= 0); + + /* Create the dataspace */ + space = H5Screate_simple(F70_RANK, dim, NULL); + HDassert(space >= 0); + + /* Create the file */ + fid = H5Fcreate(FILE70, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + HDassert(fid >= 0); + + /* Create the memory data type */ + Array1Structid = H5Tcreate(H5T_COMPOUND, sizeof(Array1Struct)); + HDassert(Array1Structid >= 0); + + /* Insert the arrays and variables into the structure */ + status = H5Tinsert(Array1Structid, F70_DATASETU08, HOFFSET(Array1Struct, dsetu8), arrayu8_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETU16, HOFFSET(Array1Struct, dsetu16), arrayu16_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETU32, HOFFSET(Array1Struct, dsetu32), arrayu32_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETU64, HOFFSET(Array1Struct, dsetu64), arrayu64_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS08, HOFFSET(Array1Struct, dset8), array8_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS16, HOFFSET(Array1Struct, dset16), array16_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS32, HOFFSET(Array1Struct, dset32), array32_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS64, HOFFSET(Array1Struct, dset64), array64_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DUMMYDBL, HOFFSET(Array1Struct, dsetdbl), arraydbl_tid); + HDassert(status >= 0); + + /* Create the dataset */ + dataset = H5Dcreate2(fid, F70_DATASETNAME, Array1Structid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + /* Write data to the dataset */ + status = H5Dwrite(dataset, Array1Structid, H5S_ALL, H5S_ALL, H5P_DEFAULT, Array1); + HDassert(status >= 0); + + /* Release resources */ + status = H5Tclose(Array1Structid); + HDassert(status >= 0); + + status = H5Tclose(arrayu8_tid); + HDassert(status >= 0); + + status = H5Tclose(arrayu16_tid); + HDassert(status >= 0); + + status = H5Tclose(arrayu32_tid); + HDassert(status >= 0); + + status = H5Tclose(arrayu64_tid); + HDassert(status >= 0); + + status = H5Tclose(array8_tid); + HDassert(status >= 0); + + status = H5Tclose(array16_tid); + HDassert(status >= 0); + + status = H5Tclose(array32_tid); + HDassert(status >= 0); + + status = H5Tclose(array64_tid); + HDassert(status >= 0); + + status = H5Tclose(arraydbl_tid); + HDassert(status >= 0); + + status = H5Sclose(space); + HDassert(status >= 0); + + status = H5Dclose(dataset); + HDassert(status >= 0); + + status = H5Fclose(fid); + HDassert(status >= 0); +} + +static void gent_compound_attr_intsizes(void) { + hid_t fid, attr, space, root; + hsize_t dims[2]; + hsize_t array_dim8[]={F70_XDIM,F70_YDIM8}; /* Array dimensions */ + hsize_t array_dim16[]={F70_XDIM,F70_YDIM16}; /* Array dimensions */ + hsize_t array_dim32[]={F70_XDIM,F70_YDIM32}; /* Array dimensions */ + hsize_t array_dim64[]={F70_XDIM,F70_YDIM64}; /* Array dimensions */ + hid_t arrayu8_tid; /* Array datatype handle */ + hid_t arrayu16_tid; /* Array datatype handle */ + hid_t arrayu32_tid; /* Array datatype handle */ + hid_t arrayu64_tid; /* Array datatype handle */ + hid_t array8_tid; /* Array datatype handle */ + hid_t array16_tid; /* Array datatype handle */ + hid_t array32_tid; /* Array datatype handle */ + hid_t array64_tid; /* Array datatype handle */ + hid_t arraydbl_tid; /* Array datatype handle */ + uint8_t valu8bits; + uint16_t valu16bits; + uint32_t valu32bits; + uint64_t valu64bits; + int8_t val8bits; + int16_t val16bits; + int32_t val32bits; + int64_t val64bits; + /* Structure and array for compound types */ + typedef struct Array1Struct { + uint8_t dsetu8[F70_XDIM][F70_YDIM8]; + uint16_t dsetu16[F70_XDIM][F70_YDIM16]; + uint32_t dsetu32[F70_XDIM][F70_YDIM32]; + uint64_t dsetu64[F70_XDIM][F70_YDIM64]; + int8_t dset8[F70_XDIM][F70_YDIM8]; + int16_t dset16[F70_XDIM][F70_YDIM16]; + int32_t dset32[F70_XDIM][F70_YDIM32]; + int64_t dset64[F70_XDIM][F70_YDIM64]; + double dsetdbl[F70_XDIM][F70_YDIM8]; + } Array1Struct; + Array1Struct Array1[F70_LENGTH]; + + hid_t Array1Structid; /* File datatype identifier */ + herr_t status; /* Error checking variable */ + hsize_t dim[] = { F70_LENGTH }; /* Dataspace dimensions */ + + int m, n, o; /* Array init loop vars */ + + /* Initialize the data in the arrays/datastructure */ + for (m = 0; m < F70_LENGTH; m++) { + + /* Array of 8 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM8; + + valu8bits = (uint8_t) ~0u; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu8[n][0] = valu8bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu8[n][o] = Array1[m].dsetu8[n][o-1] << 1; + } + valu8bits <<= 1; + } + + /* Array of 16 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM16; + + valu16bits = (uint16_t) ~0u; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu16[n][0] = valu16bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu16[n][o] = Array1[m].dsetu16[n][o-1] << 1; + } + valu16bits <<= 1; + } + + /* Array of 32 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM32; + + valu32bits = (uint32_t) ~0u; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu32[n][0] = valu32bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu32[n][o] = Array1[m].dsetu32[n][o-1] << 1; + } + valu32bits <<= 1; + } + + /* Array of 64 bits unsigned int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM64; + + valu64bits = (uint64_t) ~0Lu; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dsetu64[n][0] = valu64bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dsetu64[n][o] = Array1[m].dsetu64[n][o-1] << 1; + } + valu64bits <<= 1; + } + + /* Array of 8 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM8; + + val8bits = (int8_t) ~0; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset8[n][0] = val8bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset8[n][o] = Array1[m].dset8[n][o-1] << 1; + } + val8bits <<= 1; + } + + /* Array of 16 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM16; + + val16bits = (int16_t) ~0; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset16[n][0] = val16bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset16[n][o] = Array1[m].dset16[n][o-1] << 1; + } + val16bits <<= 1; + } + + /* Array of 32 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM32; + + val32bits = (int32_t) ~0; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset32[n][0] = val32bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset32[n][o] = Array1[m].dset32[n][o-1] << 1; + } + val32bits <<= 1; + } + + /* Array of 64 bits signed int */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM64; + + val64bits = (int64_t) ~0L; /* all 1s */ + for(n = 0; n < dims[0]; n++){ + Array1[m].dset64[n][0] = val64bits; + for(o = 1; o < dims[1]; o++) { + Array1[m].dset64[n][o] = Array1[m].dset64[n][o-1] << 1; + } + val64bits <<= 1; + } + + /* Double Dummy set for failure tests */ + dims[0] = F70_XDIM; dims[1] = F70_YDIM8; + + for(n = 0; n < dims[0]; n++) + for(o = 0; o < dims[1]; o++) + Array1[m].dsetdbl[n][o] = 0.0001 * o + n; + } + + /* Create the array data type for the 8 bits signed int array */ + array8_tid = H5Tarray_create2(H5T_NATIVE_SCHAR, F70_ARRAY_RANK, array_dim8); + HDassert(array8_tid >= 0); + + /* Create the array data type for the 16 bits signed int array */ + array16_tid = H5Tarray_create2(H5T_NATIVE_SHORT, F70_ARRAY_RANK, array_dim16); + HDassert(array16_tid >= 0); + + /* Create the array data type for the 32 bits signed int array */ + array32_tid = H5Tarray_create2(H5T_NATIVE_INT, F70_ARRAY_RANK, array_dim32); + HDassert(array32_tid >= 0); + + /* Create the array data type for the 64 bits signed int array */ + array64_tid = H5Tarray_create2(H5T_NATIVE_LONG, F70_ARRAY_RANK, array_dim64); + HDassert(array64_tid >= 0); + + /* Create the array data type for the 8 bits signed int array */ + arrayu8_tid = H5Tarray_create2(H5T_NATIVE_UCHAR, F70_ARRAY_RANK, array_dim8); + HDassert(arrayu8_tid >= 0); + + /* Create the array data type for the 16 bits signed int array */ + arrayu16_tid = H5Tarray_create2(H5T_NATIVE_USHORT, F70_ARRAY_RANK, array_dim16); + HDassert(arrayu16_tid >= 0); + + /* Create the array data type for the 32 bits signed int array */ + arrayu32_tid = H5Tarray_create2(H5T_NATIVE_UINT, F70_ARRAY_RANK, array_dim32); + HDassert(arrayu32_tid >= 0); + + /* Create the array data type for the 64 bits signed int array */ + arrayu64_tid = H5Tarray_create2(H5T_NATIVE_ULONG, F70_ARRAY_RANK, array_dim64); + HDassert(arrayu64_tid >= 0); + + /* Create the array data type for the 32 bits double array */ + arraydbl_tid = H5Tarray_create2(H5T_NATIVE_DOUBLE, F70_ARRAY_RANK, array_dim8); + HDassert(arraydbl_tid >= 0); + + /* Create the dataspace */ + space = H5Screate_simple(F70_RANK, dim, NULL); + HDassert(space >= 0); + + /* Create the file */ + fid = H5Fcreate(FILE71, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + HDassert(fid >= 0); + + /* Create the memory data type */ + Array1Structid = H5Tcreate(H5T_COMPOUND, sizeof(Array1Struct)); + HDassert(Array1Structid >= 0); + + /* Insert the arrays and variables into the structure */ + status = H5Tinsert(Array1Structid, F70_DATASETU08, HOFFSET(Array1Struct, dsetu8), arrayu8_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETU16, HOFFSET(Array1Struct, dsetu16), arrayu16_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETU32, HOFFSET(Array1Struct, dsetu32), arrayu32_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETU64, HOFFSET(Array1Struct, dsetu64), arrayu64_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS08, HOFFSET(Array1Struct, dset8), array8_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS16, HOFFSET(Array1Struct, dset16), array16_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS32, HOFFSET(Array1Struct, dset32), array32_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DATASETS64, HOFFSET(Array1Struct, dset64), array64_tid); + HDassert(status >= 0); + + status = H5Tinsert(Array1Structid, F70_DUMMYDBL, HOFFSET(Array1Struct, dsetdbl), arraydbl_tid); + HDassert(status >= 0); + + root = H5Gopen2(fid, "/", H5P_DEFAULT); + + /* Create the Attribute */ + attr = H5Acreate2(root, F71_DATASETNAME, Array1Structid, space, H5P_DEFAULT, H5P_DEFAULT); + + /* Write data to the attribute */ + status = H5Awrite(attr, Array1Structid, Array1); + HDassert(status >= 0); + + status = H5Tclose(arrayu8_tid); + HDassert(status >= 0); + + status = H5Tclose(arrayu16_tid); + HDassert(status >= 0); + + status = H5Tclose(arrayu32_tid); + HDassert(status >= 0); + + status = H5Tclose(arrayu64_tid); + HDassert(status >= 0); + + status = H5Tclose(array8_tid); + HDassert(status >= 0); + + status = H5Tclose(array16_tid); + HDassert(status >= 0); + + status = H5Tclose(array32_tid); + HDassert(status >= 0); + + status = H5Tclose(array64_tid); + HDassert(status >= 0); + + status = H5Tclose(arraydbl_tid); + HDassert(status >= 0); + + /* Release resources */ + status = H5Tclose(Array1Structid); + HDassert(status >= 0); + + status = H5Sclose(space); + HDassert(status >= 0); + + status = H5Aclose(attr); + HDassert(status >= 0); + + status = H5Fclose(fid); + HDassert(status >= 0); +} + + +/*------------------------------------------------------------------------- * Function: main * *------------------------------------------------------------------------- @@ -7303,6 +8119,10 @@ int main(void) gent_fs_strategy_threshold(); gent_packedbits(); gent_dataset_idx(); + gent_attr_intsize(); + gent_charsets(); + gent_compound_intsizes(); + gent_compound_attr_intsizes(); return 0; } diff --git a/tools/h5dump/testh5dump.sh.in b/tools/h5dump/testh5dump.sh.in index 4db9d5b..3bd0dfd 100644 --- a/tools/h5dump/testh5dump.sh.in +++ b/tools/h5dump/testh5dump.sh.in @@ -75,6 +75,7 @@ test -d $TESTDIR || mkdir $TESTDIR # Comment '#' without space can be used. # -------------------------------------------------------------------- LIST_HDF5_TEST_FILES=" +$SRC_H5DUMP_TESTFILES/charsets.h5 $SRC_H5DUMP_TESTFILES/file_space.h5 $SRC_H5DUMP_TESTFILES/filter_fail.h5 $SRC_H5DUMP_TESTFILES/packedbits.h5 @@ -92,10 +93,13 @@ $SRC_H5DUMP_TESTFILES/tarray8.h5 $SRC_H5DUMP_TESTFILES/tattr.h5 $SRC_H5DUMP_TESTFILES/tattr2.h5 $SRC_H5DUMP_TESTFILES/tattr4_be.h5 +$SRC_H5DUMP_TESTFILES/tattrintsize.h5 $SRC_H5DUMP_TESTFILES/tattrreg.h5 $SRC_H5DUMP_TESTFILES/tbigdims.h5 $SRC_H5DUMP_TESTFILES/tbinary.h5 $SRC_H5DUMP_TESTFILES/tchar.h5 +$SRC_H5DUMP_TESTFILES/tcmpdattrintsize.h5 +$SRC_H5DUMP_TESTFILES/tcmpdintsize.h5 $SRC_H5DUMP_TESTFILES/tcompound.h5 $SRC_H5DUMP_TESTFILES/tcompound_complex.h5 $SRC_H5DUMP_TESTFILES/tdatareg.h5 @@ -161,6 +165,7 @@ $SRC_H5DUMP_TESTFILES/tvms.h5 " LIST_OTHER_TEST_FILES=" +$SRC_H5DUMP_TESTFILES/charsets.ddl $SRC_H5DUMP_TESTFILES/file_space.ddl $SRC_H5DUMP_TESTFILES/filter_fail.ddl $SRC_H5DUMP_TESTFILES/packedbits.ddl @@ -186,6 +191,7 @@ $SRC_H5DUMP_TESTFILES/tattr-1.ddl $SRC_H5DUMP_TESTFILES/tattr-2.ddl $SRC_H5DUMP_TESTFILES/tattr-3.ddl $SRC_H5DUMP_TESTFILES/tattr-4_be.ddl +$SRC_H5DUMP_TESTFILES/tattrintsize.ddl $SRC_H5DUMP_TESTFILES/tattrreg.ddl $SRC_H5DUMP_TESTFILES/tattrregR.ddl $SRC_H5DUMP_TESTFILES/tbin1.ddl @@ -199,6 +205,8 @@ $SRC_H5DUMP_TESTFILES/tboot1.ddl $SRC_H5DUMP_TESTFILES/tboot2.ddl $SRC_H5DUMP_TESTFILES/tchar1.ddl $SRC_H5DUMP_TESTFILES/tchunked.ddl +$SRC_H5DUMP_TESTFILES/tcmpdattrintsize.ddl +$SRC_H5DUMP_TESTFILES/tcmpdintsize.ddl $SRC_H5DUMP_TESTFILES/tcomp-1.ddl $SRC_H5DUMP_TESTFILES/tcomp-2.ddl $SRC_H5DUMP_TESTFILES/tcomp-3.ddl @@ -290,152 +298,9 @@ $SRC_H5DUMP_TESTFILES/tvlstr.ddl $SRC_H5DUMP_TESTFILES/tvms.ddl $SRC_H5DUMP_TESTFILES/h5dump-help.txt $SRC_H5DUMP_TESTFILES/out3.h5import -$SRC_H5DUMP_TESTFILES/tnofilename-with-packed-bits.ddl -$SRC_H5DUMP_TESTFILES/tpbitsArray.ddl -$SRC_H5DUMP_TESTFILES/tpbitsCompound.ddl -$SRC_H5DUMP_TESTFILES/tpbitsIncomplete.ddl -$SRC_H5DUMP_TESTFILES/tpbitsLengthExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsCharLengthExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsIntLengthExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsLongLengthExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsLengthPositive.ddl -$SRC_H5DUMP_TESTFILES/tpbitsMax.ddl -$SRC_H5DUMP_TESTFILES/tpbitsMaxExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsOffsetExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsCharOffsetExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsIntOffsetExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsLongOffsetExceeded.ddl -$SRC_H5DUMP_TESTFILES/tpbitsOffsetNegative.ddl -$SRC_H5DUMP_TESTFILES/tpbitsOverlapped.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSigned.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsigned.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedInt.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedInt.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLong.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLong.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLong.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLong.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedIntWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedIntWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLongWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLongWhole.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLongWhole1.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLongWhole1.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLongWhole63.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLongWhole63.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSigned4.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsigned4.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedInt8.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedInt8.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLong16.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLong16.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLong32.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLong32.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSigned2.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsigned2.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedInt4.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedInt4.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLong8.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLong8.ddl -$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLong16.ddl -$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLong16.ddl $SRC_H5DUMP_TESTFILES/tbinregR.exp " -LIST_HDF5_TEST_FILES_XML=" -$SRC_H5DUMP_TESTFILES/tbitfields.h5 -$SRC_H5DUMP_TESTFILES/tcompound2.h5 -$SRC_H5DUMP_TESTFILES/tdset2.h5 -$SRC_H5DUMP_TESTFILES/tenum.h5 -$SRC_H5DUMP_TESTFILES/textlink.h5 -$SRC_H5DUMP_TESTFILES/tloop2.h5 -$SRC_H5DUMP_TESTFILES/tmany.h5 -$SRC_H5DUMP_TESTFILES/tname-amp.h5 -$SRC_H5DUMP_TESTFILES/tname-apos.h5 -$SRC_H5DUMP_TESTFILES/tname-gt.h5 -$SRC_H5DUMP_TESTFILES/tname-lt.h5 -$SRC_H5DUMP_TESTFILES/tname-quot.h5 -$SRC_H5DUMP_TESTFILES/tname-sp.h5 -$SRC_H5DUMP_TESTFILES/tnodata.h5 -$SRC_H5DUMP_TESTFILES/tobjref.h5 -$SRC_H5DUMP_TESTFILES/topaque.h5 -$SRC_H5DUMP_TESTFILES/tref.h5 -$SRC_H5DUMP_TESTFILES/tref-escapes.h5 -$SRC_H5DUMP_TESTFILES/tref-escapes-at.h5 -$SRC_H5DUMP_TESTFILES/tstring.h5 -$SRC_H5DUMP_TESTFILES/tstring-at.h5 -" - -LIST_OTHER_TEST_FILES_XML=" -$SRC_H5DUMP_TESTFILES/tall.h5.xml -$SRC_H5DUMP_TESTFILES/tall-2A.h5.xml -$SRC_H5DUMP_TESTFILES/tarray1.h5.xml -$SRC_H5DUMP_TESTFILES/tarray2.h5.xml -$SRC_H5DUMP_TESTFILES/tarray3.h5.xml -$SRC_H5DUMP_TESTFILES/tarray6.h5.xml -$SRC_H5DUMP_TESTFILES/tarray7.h5.xml -$SRC_H5DUMP_TESTFILES/tattr.h5.xml -$SRC_H5DUMP_TESTFILES/tbitfields.h5.xml -$SRC_H5DUMP_TESTFILES/tcompound_complex.h5.xml -$SRC_H5DUMP_TESTFILES/tcompound.h5.xml -$SRC_H5DUMP_TESTFILES/tcompound2.h5.xml -$SRC_H5DUMP_TESTFILES/tdatareg.h5.xml -$SRC_H5DUMP_TESTFILES/tdset.h5.xml -$SRC_H5DUMP_TESTFILES/tdset2.h5.xml -$SRC_H5DUMP_TESTFILES/tempty.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-dtd.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-dtd-2.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-dtd-uri.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-nons.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-nons-2.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-nons-uri.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-ns.h5.xml -$SRC_H5DUMP_TESTFILES/tempty-ns-2.h5.xml -$SRC_H5DUMP_TESTFILES/tenum.h5.xml -$SRC_H5DUMP_TESTFILES/textlink.h5.xml -$SRC_H5DUMP_TESTFILES/tfpformat.h5.xml -$SRC_H5DUMP_TESTFILES/tgroup.h5.xml -$SRC_H5DUMP_TESTFILES/thlink.h5.xml -$SRC_H5DUMP_TESTFILES/tloop.h5.xml -$SRC_H5DUMP_TESTFILES/tloop2.h5.xml -$SRC_H5DUMP_TESTFILES/tmany.h5.xml -$SRC_H5DUMP_TESTFILES/tname-amp.h5.xml -$SRC_H5DUMP_TESTFILES/tname-apos.h5.xml -$SRC_H5DUMP_TESTFILES/tnamed_dtype_attr.h5.xml -$SRC_H5DUMP_TESTFILES/tname-gt.h5.xml -$SRC_H5DUMP_TESTFILES/tname-lt.h5.xml -$SRC_H5DUMP_TESTFILES/tname-quot.h5.xml -$SRC_H5DUMP_TESTFILES/tname-sp.h5.xml -$SRC_H5DUMP_TESTFILES/tnestedcomp.h5.xml -$SRC_H5DUMP_TESTFILES/tnodata.h5.xml -$SRC_H5DUMP_TESTFILES/tobjref.h5.xml -$SRC_H5DUMP_TESTFILES/topaque.h5.xml -$SRC_H5DUMP_TESTFILES/torderattr1.h5.xml -$SRC_H5DUMP_TESTFILES/torderattr2.h5.xml -$SRC_H5DUMP_TESTFILES/torderattr3.h5.xml -$SRC_H5DUMP_TESTFILES/torderattr4.h5.xml -$SRC_H5DUMP_TESTFILES/tref.h5.xml -$SRC_H5DUMP_TESTFILES/tref-escapes.h5.xml -$SRC_H5DUMP_TESTFILES/tref-escapes-at.h5.xml -$SRC_H5DUMP_TESTFILES/tsaf.h5.xml -$SRC_H5DUMP_TESTFILES/tslink.h5.xml -$SRC_H5DUMP_TESTFILES/tstr.h5.xml -$SRC_H5DUMP_TESTFILES/tstr2.h5.xml -$SRC_H5DUMP_TESTFILES/tstring.h5.xml -$SRC_H5DUMP_TESTFILES/tstring-at.h5.xml -$SRC_H5DUMP_TESTFILES/tudlink.h5.xml -$SRC_H5DUMP_TESTFILES/tvldtypes1.h5.xml -$SRC_H5DUMP_TESTFILES/tvldtypes2.h5.xml -$SRC_H5DUMP_TESTFILES/tvldtypes3.h5.xml -$SRC_H5DUMP_TESTFILES/tvldtypes4.h5.xml -$SRC_H5DUMP_TESTFILES/tvldtypes5.h5.xml -$SRC_H5DUMP_TESTFILES/tvlstr.h5.xml -" - # # copy test files and expected output files from source dirs to test dir # @@ -709,6 +574,12 @@ COPY_TESTFILES_TO_TESTDIR # test for signed/unsigned datasets TOOLTEST packedbits.ddl --enable-error-stack packedbits.h5 +# test for compound signed/unsigned datasets +TOOLTEST tcmpdintsize.ddl --enable-error-stack tcmpdintsize.h5 +# test for signed/unsigned attributes +TOOLTEST tattrintsize.ddl --enable-error-stack tattrintsize.h5 +# test for compound signed/unsigned attributes +TOOLTEST tcmpdattrintsize.ddl --enable-error-stack tcmpdattrintsize.h5 # test for displaying groups TOOLTEST tgroup-1.ddl --enable-error-stack tgroup.h5 # test for displaying the selected groups @@ -834,6 +705,9 @@ TOOLTEST tno-subset.ddl --no-compact-subset -d "AHFINDERDIRECT::ah_centroid_t[0] # test printing characters in ASCII instead of decimal TOOLTEST tchar1.ddl --enable-error-stack -r tchar.h5 +# test datatypes in ASCII and UTF8 +TOOLTEST charsets.ddl --enable-error-stack charsets.h5 + # rev. 2004 # tests for super block @@ -1042,90 +916,6 @@ TOOLTEST3 filter_fail.ddl --enable-error-stack filter_fail.h5 # test for -o -y for dataset with attributes TOOLTEST tall-6.ddl --enable-error-stack -y -o data -d /g1/g1.1/dset1.1.1 tall.h5 -####### test for dataset packed bits ###### - -# test failure handling -# Missing file name -TOOLTEST tnofilename-with-packed-bits.ddl --enable-error-stack -# Limits: -# Maximum number of packed bits is 8 (for now). -# Maximum integer size is 64 (for now). -# Maximun Offset is 63 (Maximum size - 1). -# Maximum Offset+Length is 64 (Maximum size). -# Tests: -# Normal operation on both signed and unsigned int datasets. -# Sanity check -# Their rawdata output should be the same. -TOOLTEST tpbitsSignedWhole.ddl --enable-error-stack -d /DS08BITS -M 0,8 packedbits.h5 -TOOLTEST tpbitsUnsignedWhole.ddl --enable-error-stack -d /DU08BITS -M 0,8 packedbits.h5 -TOOLTEST tpbitsSignedIntWhole.ddl --enable-error-stack -d /DS16BITS -M 0,16 packedbits.h5 -TOOLTEST tpbitsUnsignedIntWhole.ddl --enable-error-stack -d /DU16BITS -M 0,16 packedbits.h5 -TOOLTEST tpbitsSignedLongWhole.ddl --enable-error-stack -d /DS32BITS -M 0,32 packedbits.h5 -TOOLTEST tpbitsUnsignedLongWhole.ddl --enable-error-stack -d /DU32BITS -M 0,32 packedbits.h5 -TOOLTEST tpbitsSignedLongLongWhole.ddl --enable-error-stack -d /DS64BITS -M 0,64 packedbits.h5 -TOOLTEST tpbitsUnsignedLongLongWhole.ddl --enable-error-stack -d /DU64BITS -M 0,64 packedbits.h5 -TOOLTEST tpbitsSignedLongLongWhole63.ddl --enable-error-stack -d /DS64BITS -M 0,63 packedbits.h5 -TOOLTEST tpbitsUnsignedLongLongWhole63.ddl --enable-error-stack -d /DU64BITS -M 0,63 packedbits.h5 -TOOLTEST tpbitsSignedLongLongWhole1.ddl --enable-error-stack -d /DS64BITS -M 1,63 packedbits.h5 -TOOLTEST tpbitsUnsignedLongLongWhole1.ddl --enable-error-stack -d /DU64BITS -M 1,63 packedbits.h5 -# Half sections -TOOLTEST tpbitsSigned4.ddl --enable-error-stack -d /DS08BITS -M 0,4,4,4 packedbits.h5 -TOOLTEST tpbitsUnsigned4.ddl --enable-error-stack -d /DU08BITS -M 0,4,4,4 packedbits.h5 -TOOLTEST tpbitsSignedInt8.ddl --enable-error-stack -d /DS16BITS -M 0,8,8,8 packedbits.h5 -TOOLTEST tpbitsUnsignedInt8.ddl --enable-error-stack -d /DU16BITS -M 0,8,8,8 packedbits.h5 -TOOLTEST tpbitsSignedLong16.ddl --enable-error-stack -d /DS32BITS -M 0,16,16,16 packedbits.h5 -TOOLTEST tpbitsUnsignedLong16.ddl --enable-error-stack -d /DU32BITS -M 0,16,16,16 packedbits.h5 -TOOLTEST tpbitsSignedLongLong32.ddl --enable-error-stack -d /DS64BITS -M 0,32,32,32 packedbits.h5 -TOOLTEST tpbitsUnsignedLongLong32.ddl --enable-error-stack -d /DU64BITS -M 0,32,32,32 packedbits.h5 -# Quarter sections -TOOLTEST tpbitsSigned2.ddl --enable-error-stack -d /DS08BITS -M 0,2,2,2,4,2,6,2 packedbits.h5 -TOOLTEST tpbitsUnsigned2.ddl --enable-error-stack -d /DU08BITS -M 0,2,2,2,4,2,6,2 packedbits.h5 -TOOLTEST tpbitsSignedInt4.ddl --enable-error-stack -d /DS16BITS -M 0,4,4,4,8,4,12,4 packedbits.h5 -TOOLTEST tpbitsUnsignedInt4.ddl --enable-error-stack -d /DU16BITS -M 0,4,4,4,8,4,12,4 packedbits.h5 -TOOLTEST tpbitsSignedLong8.ddl --enable-error-stack -d /DS32BITS -M 0,8,8,8,16,8,24,8 packedbits.h5 -TOOLTEST tpbitsUnsignedLong8.ddl --enable-error-stack -d /DU32BITS -M 0,8,8,8,16,8,24,8 packedbits.h5 -TOOLTEST tpbitsSignedLongLong16.ddl --enable-error-stack -d /DS64BITS -M 0,16,16,16,32,16,48,16 packedbits.h5 -TOOLTEST tpbitsUnsignedLongLong16.ddl --enable-error-stack -d /DU64BITS -M 0,16,16,16,32,16,48,16 packedbits.h5 -# Begin and End -TOOLTEST tpbitsSigned.ddl --enable-error-stack -d /DS08BITS -M 0,2,2,6 packedbits.h5 -TOOLTEST tpbitsUnsigned.ddl --enable-error-stack -d /DU08BITS -M 0,2,2,6 packedbits.h5 -TOOLTEST tpbitsSignedInt.ddl --enable-error-stack -d /DS16BITS -M 0,2,10,6 packedbits.h5 -TOOLTEST tpbitsUnsignedInt.ddl --enable-error-stack -d /DU16BITS -M 0,2,10,6 packedbits.h5 -TOOLTEST tpbitsSignedLong.ddl --enable-error-stack -d /DS32BITS -M 0,2,26,6 packedbits.h5 -TOOLTEST tpbitsUnsignedLong.ddl --enable-error-stack -d /DU32BITS -M 0,2,26,6 packedbits.h5 -TOOLTEST tpbitsSignedLongLong.ddl --enable-error-stack -d /DS64BITS -M 0,2,58,6 packedbits.h5 -TOOLTEST tpbitsUnsignedLongLong.ddl --enable-error-stack -d /DU64BITS -M 0,2,58,6 packedbits.h5 -# Overlapped packed bits. -TOOLTEST tpbitsOverlapped.ddl --enable-error-stack -d /DS08BITS -M 0,1,1,1,2,1,0,3 packedbits.h5 -# Maximum number of packed bits. -TOOLTEST tpbitsMax.ddl --enable-error-stack -d /DS08BITS -M 0,1,1,1,2,1,3,1,4,1,5,1,6,1,7,1 packedbits.h5 -# Compound type. -TOOLTEST tpbitsCompound.ddl --enable-error-stack -d /dset1 -M 0,1,1,1 tcompound.h5 -# Array type. -TOOLTEST tpbitsArray.ddl --enable-error-stack -d /Dataset1 -M 0,1,1,1 tarray1.h5 -# Test Error handling. -# Too many packed bits requested. Max is 8 for now. -TOOLTEST tpbitsMaxExceeded.ddl --enable-error-stack -d /DS08BITS -M 0,1,0,1,1,1,2,1,3,1,4,1,5,1,6,1,7,1 packedbits.h5 -# Offset too large. Max is 7 (8-1) for now. -TOOLTEST tpbitsOffsetExceeded.ddl --enable-error-stack -d /DS08BITS -M 64,1 packedbits.h5 -TOOLTEST tpbitsCharOffsetExceeded.ddl --enable-error-stack -d /DS08BITS -M 8,1 packedbits.h5 -TOOLTEST tpbitsIntOffsetExceeded.ddl --enable-error-stack -d /DS16BITS -M 16,1 packedbits.h5 -TOOLTEST tpbitsLongOffsetExceeded.ddl --enable-error-stack -d /DS32BITS -M 32,1 packedbits.h5 -# Bad offset, must not be negative. -TOOLTEST tpbitsOffsetNegative.ddl --enable-error-stack -d /DS08BITS -M -1,1 packedbits.h5 -# Bad length, must not be positive. -TOOLTEST tpbitsLengthPositive.ddl --enable-error-stack -d /DS08BITS -M 4,0 packedbits.h5 -# Offset+Length is too large. Max is 8 for now. -TOOLTEST tpbitsLengthExceeded.ddl --enable-error-stack -d /DS08BITS -M 37,28 packedbits.h5 -TOOLTEST tpbitsCharLengthExceeded.ddl --enable-error-stack -d /DS08BITS -M 2,7 packedbits.h5 -TOOLTEST tpbitsIntLengthExceeded.ddl --enable-error-stack -d /DS16BITS -M 10,7 packedbits.h5 -TOOLTEST tpbitsLongLengthExceeded.ddl --enable-error-stack -d /DS32BITS -M 26,7 packedbits.h5 -# Incomplete pair of packed bits request. -TOOLTEST tpbitsIncomplete.ddl --enable-error-stack -d /DS08BITS -M 0,2,2,1,0,2,2, packedbits.h5 - - -# tests for Fixed Array chunk indices -TOOLTEST tdset_idx.ddl -p -H tdset_idx.h5 # Report test results and exit if test $nerrors -eq 0 ; then diff --git a/tools/h5dump/testh5dumppbits.sh.in b/tools/h5dump/testh5dumppbits.sh.in new file mode 100644 index 0000000..393fcc1 --- /dev/null +++ b/tools/h5dump/testh5dumppbits.sh.in @@ -0,0 +1,495 @@ +#! /bin/sh +# +# Copyright by The HDF Group. +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the files COPYING and Copyright.html. COPYING can be found at the root +# of the source code distribution tree; Copyright.html can be found at the +# root level of an installed copy of the electronic HDF5 document set and +# is linked from the top-level documents page. It can also be found at +# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have +# access to either file, you may request a copy from help@hdfgroup.org. +# +# Tests for the h5dump tool with packed bits type files + +# Determine which filters are available +USE_FILTER_SZIP="@USE_FILTER_SZIP@" +USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" +USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" +USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" +USE_FILTER_NBIT="@USE_FILTER_NBIT@" +USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" + +TESTNAME=h5dump +EXIT_SUCCESS=0 +EXIT_FAILURE=1 + +DUMPER=h5dump # The tool name +DUMPER_BIN=`pwd`/$DUMPER # The path of the tool binary + +H5DIFF=../h5diff/h5diff # The h5diff tool name +H5DIFF_BIN=`pwd`/$H5DIFF # The path of the h5diff tool binary + +H5IMPORT=../h5import/h5import # The h5import tool name +H5IMPORT_BIN=`pwd`/$H5IMPORT # The path of the h5import tool binary + + +CMP='cmp -s' +DIFF='diff -c' +CP='cp' + +nerrors=0 +verbose=yes + +# The build (current) directory might be different than the source directory. +if test -z "$srcdir"; then + srcdir=. +fi +# source dirs +SRC_TOOLS="$srcdir/../" + +SRC_TOOLS_TESTFILES="$SRC_TOOLS/testfiles" +# testfiles source dirs for tools +SRC_H5LS_TESTFILES="$SRC_TOOLS_TESTFILES" +SRC_H5DUMP_TESTFILES="$SRC_TOOLS_TESTFILES" +SRC_H5DIFF_TESTFILES="$SRC_TOOLS/h5diff/testfiles" +SRC_H5COPY_TESTFILES="$SRC_TOOLS/h5copy/testfiles" +SRC_H5REPACK_TESTFILES="$SRC_TOOLS/h5repack/testfiles" +SRC_H5JAM_TESTFILES="$SRC_TOOLS/h5jam/testfiles" +SRC_H5STAT_TESTFILES="$SRC_TOOLS/h5stat/testfiles" +SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/h5import/testfiles" + +TESTDIR=./testfiles +test -d $TESTDIR || mkdir $TESTDIR + +###################################################################### +# test files +# -------------------------------------------------------------------- +# All the test files copy from source directory to test directory +# NOTE: Keep this framework to add/remove test files. +# Any test files from other tools can be used in this framework. +# This list are also used for checking exist. +# Comment '#' without space can be used. +# -------------------------------------------------------------------- +LIST_HDF5_TEST_FILES=" +$SRC_H5DUMP_TESTFILES/packedbits.h5 +" + +LIST_OTHER_TEST_FILES=" +$SRC_H5DUMP_TESTFILES/tnofilename-with-packed-bits.ddl +$SRC_H5DUMP_TESTFILES/tpbitsArray.ddl +$SRC_H5DUMP_TESTFILES/tpbitsCompound.ddl +$SRC_H5DUMP_TESTFILES/tpbitsIncomplete.ddl +$SRC_H5DUMP_TESTFILES/tpbitsLengthExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsCharLengthExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsIntLengthExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsLongLengthExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsLengthPositive.ddl +$SRC_H5DUMP_TESTFILES/tpbitsMax.ddl +$SRC_H5DUMP_TESTFILES/tpbitsMaxExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsOffsetExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsCharOffsetExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsIntOffsetExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsLongOffsetExceeded.ddl +$SRC_H5DUMP_TESTFILES/tpbitsOffsetNegative.ddl +$SRC_H5DUMP_TESTFILES/tpbitsOverlapped.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSigned.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsigned.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedInt.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedInt.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLong.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLong.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLong.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLong.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedIntWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedIntWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLongWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLongWhole.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLongWhole1.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLongWhole1.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLongWhole63.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLongWhole63.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSigned4.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsigned4.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedInt8.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedInt8.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLong16.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLong16.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLong32.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLong32.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSigned2.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsigned2.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedInt4.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedInt4.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLong8.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLong8.ddl +$SRC_H5DUMP_TESTFILES/tpbitsSignedLongLong16.ddl +$SRC_H5DUMP_TESTFILES/tpbitsUnsignedLongLong16.ddl +" + +# +# copy test files and expected output files from source dirs to test dir +# +COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES $LIST_HDF5_TEST_FILES_XML $LIST_OTHER_TEST_FILES_XML" + +COPY_TESTFILES_TO_TESTDIR() +{ + # copy test files. Used -f to make sure get a new copy + for tstfile in $COPY_TESTFILES + do + # ignore '#' comment + echo $tstfile | tr -d ' ' | grep '^#' > /dev/null + RET=$? + if [ $RET -eq 1 ]; then + if [ -a $tstfile ]; then + $CP -f $tstfile $TESTDIR + else + echo "Error: FAILED to copy $tstfile" + echo " $tstfile doesn't exist!" + exit $EXIT_FAILURE + fi + fi + done +} + + +# Print a line-line message left justified in a field of 70 characters +# beginning with the word "Testing". +# +TESTING() { + SPACES=" " + echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012' +} + +# Source in the output filter function definitions. +. $srcdir/../../bin/output_filter.sh + +# Run a test and print PASS or *FAIL*. If a test fails then increment +# the `nerrors' global variable and (if $verbose is set) display the +# difference between the actual output and the expected output. The +# expected output is given as the first argument to this function and +# the actual output file is calculated by replacing the `.ddl' with +# `.out'. The actual output is not removed if $HDF5_NOCLEANUP has a +# non-zero value. +# +TOOLTEST() { + expect="$TESTDIR/$1" + actual="$TESTDIR/`basename $1 .ddl`.out" + actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + shift + + # Run test. + TESTING $DUMPER $@ + ( + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" + ) >$actual 2>$actual_err + + # save actual and actual_err in case they are needed later. + cp $actual $actual_sav + STDOUT_FILTER $actual + cp $actual_err $actual_err_sav + STDERR_FILTER $actual_err + cat $actual_err >> $actual + + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + elif $CMP $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err $actual_sav $actual_err_sav $actual_ext + fi + +} + + +# same as TOOLTEST1 but compares generated file to expected output +# and compares the generated data file to the expected data file +# used for the binary tests that expect a full path in -o without -b +TOOLTEST2() { + + expectdata="$TESTDIR/$1" + expect="$TESTDIR/`basename $1 .exp`.ddl" + actualdata="$TESTDIR/`basename $1 .exp`.txt" + actual="$TESTDIR/`basename $1 .exp`.out" + actual_err="$TESTDIR/`basename $1 .exp`.err" + shift + + # Run test. + TESTING $DUMPER $@ + ( + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" + ) >$actual 2>$actual_err + cat $actual_err >> $actual + + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + elif $CMP $expect $actual; then + if [ ! -f $expectdata ]; then + # Create the expect data file if it doesn't yet exist. + echo " CREATED" + cp $actualdata $expectdata + elif $CMP $expectdata $actualdata; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' + fi + else + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actualdata $actual_err + fi + +} + +# same as TOOLTEST but filters error stack outp +# Extract file name, line number, version and thread IDs because they may be different +TOOLTEST3() { + + expect="$TESTDIR/$1" + actual="$TESTDIR/`basename $1 .ddl`.out" + actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_ext="$TESTDIR/`basename $1 .ddl`.ext" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + shift + + # Run test. + TESTING $DUMPER $@ + ( + cd $TESTDIR + $RUNSERIAL $DUMPER_BIN "$@" + ) >$actual 2>$actual_err + + # save actual and actual_err in case they are needed later. + cp $actual $actual_sav + STDOUT_FILTER $actual + cp $actual_err $actual_err_sav + STDERR_FILTER $actual_err + + # Extract file name, line number, version and thread IDs because they may be different + sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \ + -e 's/line [0-9]*/line (number)/' \ + -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \ + -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \ + -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ + -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ + $actual_err > $actual_ext + cat $actual_ext >> $actual + + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + elif $CMP $expect $actual; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.ddl) differs from actual result (*.out)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err $actual_sav $actual_err_sav + fi + +} + +# Print a "SKIP" message +SKIP() { + TESTING $DUMPER $@ + echo " -SKIP-" +} + +# Print a line-line message left justified in a field of 70 characters +# +PRINT_H5DIFF() { + SPACES=" " + echo " Running h5diff $* $SPACES" | cut -c1-70 | tr -d '\012' +} + + +# Call the h5diff tool +# +DIFFTEST() +{ + PRINT_H5DIFF $@ + ( + cd $TESTDIR + $RUNSERIAL $H5DIFF_BIN "$@" -q + ) + RET=$? + if [ $RET != 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + fi + +} + +# Print a line-line message left justified in a field of 70 characters +# beginning with the word "Verifying". +# +PRINT_H5IMPORT() { + SPACES=" " + echo " Running h5import $* $SPACES" | cut -c1-70 | tr -d '\012' +} + +# Call the h5import tool +# +IMPORTTEST() +{ + # remove the output hdf5 file if it exists + hdf5_file="$TESTDIR/$5" + if [ -f $hdf5_file ]; then + rm -f $hdf5_file + fi + + PRINT_H5IMPORT $@ + ( + cd $TESTDIR + $RUNSERIAL $H5IMPORT_BIN "$@" + ) + RET=$? + if [ $RET != 0 ] ; then + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + else + echo " PASSED" + fi + +} + + +############################################################################## +############################################################################## +### T H E T E S T S ### +############################################################################## +############################################################################## +# prepare for test +COPY_TESTFILES_TO_TESTDIR + +####### test for dataset packed bits ###### + +# test failure handling +# Missing file name +TOOLTEST tnofilename-with-packed-bits.ddl --enable-error-stack +# Limits: +# Maximum number of packed bits is 8 (for now). +# Maximum integer size is 64 (for now). +# Maximun Offset is 63 (Maximum size - 1). +# Maximum Offset+Length is 64 (Maximum size). +# Tests: +# Normal operation on both signed and unsigned int datasets. +# Sanity check +# Their rawdata output should be the same. +TOOLTEST tpbitsSignedWhole.ddl --enable-error-stack -d /DS08BITS -M 0,8 packedbits.h5 +TOOLTEST tpbitsUnsignedWhole.ddl --enable-error-stack -d /DU08BITS -M 0,8 packedbits.h5 +TOOLTEST tpbitsSignedIntWhole.ddl --enable-error-stack -d /DS16BITS -M 0,16 packedbits.h5 +TOOLTEST tpbitsUnsignedIntWhole.ddl --enable-error-stack -d /DU16BITS -M 0,16 packedbits.h5 +TOOLTEST tpbitsSignedLongWhole.ddl --enable-error-stack -d /DS32BITS -M 0,32 packedbits.h5 +TOOLTEST tpbitsUnsignedLongWhole.ddl --enable-error-stack -d /DU32BITS -M 0,32 packedbits.h5 +TOOLTEST tpbitsSignedLongLongWhole.ddl --enable-error-stack -d /DS64BITS -M 0,64 packedbits.h5 +TOOLTEST tpbitsUnsignedLongLongWhole.ddl --enable-error-stack -d /DU64BITS -M 0,64 packedbits.h5 +TOOLTEST tpbitsSignedLongLongWhole63.ddl --enable-error-stack -d /DS64BITS -M 0,63 packedbits.h5 +TOOLTEST tpbitsUnsignedLongLongWhole63.ddl --enable-error-stack -d /DU64BITS -M 0,63 packedbits.h5 +TOOLTEST tpbitsSignedLongLongWhole1.ddl --enable-error-stack -d /DS64BITS -M 1,63 packedbits.h5 +TOOLTEST tpbitsUnsignedLongLongWhole1.ddl --enable-error-stack -d /DU64BITS -M 1,63 packedbits.h5 +# Half sections +TOOLTEST tpbitsSigned4.ddl --enable-error-stack -d /DS08BITS -M 0,4,4,4 packedbits.h5 +TOOLTEST tpbitsUnsigned4.ddl --enable-error-stack -d /DU08BITS -M 0,4,4,4 packedbits.h5 +TOOLTEST tpbitsSignedInt8.ddl --enable-error-stack -d /DS16BITS -M 0,8,8,8 packedbits.h5 +TOOLTEST tpbitsUnsignedInt8.ddl --enable-error-stack -d /DU16BITS -M 0,8,8,8 packedbits.h5 +TOOLTEST tpbitsSignedLong16.ddl --enable-error-stack -d /DS32BITS -M 0,16,16,16 packedbits.h5 +TOOLTEST tpbitsUnsignedLong16.ddl --enable-error-stack -d /DU32BITS -M 0,16,16,16 packedbits.h5 +TOOLTEST tpbitsSignedLongLong32.ddl --enable-error-stack -d /DS64BITS -M 0,32,32,32 packedbits.h5 +TOOLTEST tpbitsUnsignedLongLong32.ddl --enable-error-stack -d /DU64BITS -M 0,32,32,32 packedbits.h5 +# Quarter sections +TOOLTEST tpbitsSigned2.ddl --enable-error-stack -d /DS08BITS -M 0,2,2,2,4,2,6,2 packedbits.h5 +TOOLTEST tpbitsUnsigned2.ddl --enable-error-stack -d /DU08BITS -M 0,2,2,2,4,2,6,2 packedbits.h5 +TOOLTEST tpbitsSignedInt4.ddl --enable-error-stack -d /DS16BITS -M 0,4,4,4,8,4,12,4 packedbits.h5 +TOOLTEST tpbitsUnsignedInt4.ddl --enable-error-stack -d /DU16BITS -M 0,4,4,4,8,4,12,4 packedbits.h5 +TOOLTEST tpbitsSignedLong8.ddl --enable-error-stack -d /DS32BITS -M 0,8,8,8,16,8,24,8 packedbits.h5 +TOOLTEST tpbitsUnsignedLong8.ddl --enable-error-stack -d /DU32BITS -M 0,8,8,8,16,8,24,8 packedbits.h5 +TOOLTEST tpbitsSignedLongLong16.ddl --enable-error-stack -d /DS64BITS -M 0,16,16,16,32,16,48,16 packedbits.h5 +TOOLTEST tpbitsUnsignedLongLong16.ddl --enable-error-stack -d /DU64BITS -M 0,16,16,16,32,16,48,16 packedbits.h5 +# Begin and End +TOOLTEST tpbitsSigned.ddl --enable-error-stack -d /DS08BITS -M 0,2,2,6 packedbits.h5 +TOOLTEST tpbitsUnsigned.ddl --enable-error-stack -d /DU08BITS -M 0,2,2,6 packedbits.h5 +TOOLTEST tpbitsSignedInt.ddl --enable-error-stack -d /DS16BITS -M 0,2,10,6 packedbits.h5 +TOOLTEST tpbitsUnsignedInt.ddl --enable-error-stack -d /DU16BITS -M 0,2,10,6 packedbits.h5 +TOOLTEST tpbitsSignedLong.ddl --enable-error-stack -d /DS32BITS -M 0,2,26,6 packedbits.h5 +TOOLTEST tpbitsUnsignedLong.ddl --enable-error-stack -d /DU32BITS -M 0,2,26,6 packedbits.h5 +TOOLTEST tpbitsSignedLongLong.ddl --enable-error-stack -d /DS64BITS -M 0,2,58,6 packedbits.h5 +TOOLTEST tpbitsUnsignedLongLong.ddl --enable-error-stack -d /DU64BITS -M 0,2,58,6 packedbits.h5 +# Overlapped packed bits. +TOOLTEST tpbitsOverlapped.ddl --enable-error-stack -d /DS08BITS -M 0,1,1,1,2,1,0,3 packedbits.h5 +# Maximum number of packed bits. +TOOLTEST tpbitsMax.ddl --enable-error-stack -d /DS08BITS -M 0,1,1,1,2,1,3,1,4,1,5,1,6,1,7,1 packedbits.h5 +# Compound type. +TOOLTEST tpbitsCompound.ddl --enable-error-stack -d /dset1 -M 0,1,1,1 tcompound.h5 +# Array type. +TOOLTEST tpbitsArray.ddl --enable-error-stack -d /Dataset1 -M 0,1,1,1 tarray1.h5 +# Test Error handling. +# Too many packed bits requested. Max is 8 for now. +TOOLTEST tpbitsMaxExceeded.ddl --enable-error-stack -d /DS08BITS -M 0,1,0,1,1,1,2,1,3,1,4,1,5,1,6,1,7,1 packedbits.h5 +# Offset too large. Max is 7 (8-1) for now. +TOOLTEST tpbitsOffsetExceeded.ddl --enable-error-stack -d /DS08BITS -M 64,1 packedbits.h5 +TOOLTEST tpbitsCharOffsetExceeded.ddl --enable-error-stack -d /DS08BITS -M 8,1 packedbits.h5 +TOOLTEST tpbitsIntOffsetExceeded.ddl --enable-error-stack -d /DS16BITS -M 16,1 packedbits.h5 +TOOLTEST tpbitsLongOffsetExceeded.ddl --enable-error-stack -d /DS32BITS -M 32,1 packedbits.h5 +# Bad offset, must not be negative. +TOOLTEST tpbitsOffsetNegative.ddl --enable-error-stack -d /DS08BITS -M -1,1 packedbits.h5 +# Bad length, must not be positive. +TOOLTEST tpbitsLengthPositive.ddl --enable-error-stack -d /DS08BITS -M 4,0 packedbits.h5 +# Offset+Length is too large. Max is 8 for now. +TOOLTEST tpbitsLengthExceeded.ddl --enable-error-stack -d /DS08BITS -M 37,28 packedbits.h5 +TOOLTEST tpbitsCharLengthExceeded.ddl --enable-error-stack -d /DS08BITS -M 2,7 packedbits.h5 +TOOLTEST tpbitsIntLengthExceeded.ddl --enable-error-stack -d /DS16BITS -M 10,7 packedbits.h5 +TOOLTEST tpbitsLongLengthExceeded.ddl --enable-error-stack -d /DS32BITS -M 26,7 packedbits.h5 +# Incomplete pair of packed bits request. +TOOLTEST tpbitsIncomplete.ddl --enable-error-stack -d /DS08BITS -M 0,2,2,1,0,2,2, packedbits.h5 + + +# Report test results and exit +if test $nerrors -eq 0 ; then + echo "All $TESTNAME tests passed." + exit $EXIT_SUCCESS +else + echo "$TESTNAME tests failed with $nerrors errors." + exit $EXIT_FAILURE +fi diff --git a/tools/h5dump/testh5dumpxml.sh.in b/tools/h5dump/testh5dumpxml.sh.in index 1bbf232..4e6081b 100644 --- a/tools/h5dump/testh5dumpxml.sh.in +++ b/tools/h5dump/testh5dumpxml.sh.in @@ -26,6 +26,7 @@ DUMPER_BIN=`pwd`/$DUMPER # The path of the tool binary CMP='cmp -s' DIFF='diff -c' +CP='cp' nerrors=0 verbose=yes @@ -34,8 +35,176 @@ verbose=yes if test -z "$srcdir"; then srcdir=. fi +# source dirs +SRC_TOOLS="$srcdir/../" -test -d ../testfiles || mkdir ../testfiles +SRC_TOOLS_TESTFILES="$SRC_TOOLS/testfiles" +# testfiles source dirs for tools +SRC_H5LS_TESTFILES="$SRC_TOOLS_TESTFILES" +SRC_H5DUMP_TESTFILES="$SRC_TOOLS_TESTFILES" +SRC_H5DIFF_TESTFILES="$SRC_TOOLS/h5diff/testfiles" +SRC_H5COPY_TESTFILES="$SRC_TOOLS/h5copy/testfiles" +SRC_H5REPACK_TESTFILES="$SRC_TOOLS/h5repack/testfiles" +SRC_H5JAM_TESTFILES="$SRC_TOOLS/h5jam/testfiles" +SRC_H5STAT_TESTFILES="$SRC_TOOLS/h5stat/testfiles" +SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/h5import/testfiles" + +TESTDIR=./testfiles +test -d $TESTDIR || mkdir $TESTDIR + +###################################################################### +# test files +# -------------------------------------------------------------------- +# All the test files copy from source directory to test directory +# NOTE: Keep this framework to add/remove test files. +# Any test files from other tools can be used in this framework. +# This list are also used for checking exist. +# Comment '#' without space can be used. +# -------------------------------------------------------------------- +LIST_HDF5_TEST_FILES_XML=" +$SRC_H5DUMP_TESTFILES/tall.h5 +$SRC_H5DUMP_TESTFILES/tarray1.h5 +$SRC_H5DUMP_TESTFILES/tarray2.h5 +$SRC_H5DUMP_TESTFILES/tarray3.h5 +$SRC_H5DUMP_TESTFILES/tarray6.h5 +$SRC_H5DUMP_TESTFILES/tarray7.h5 +$SRC_H5DUMP_TESTFILES/tattr.h5 +$SRC_H5DUMP_TESTFILES/tbitfields.h5 +$SRC_H5DUMP_TESTFILES/tcompound.h5 +$SRC_H5DUMP_TESTFILES/tcompound2.h5 +$SRC_H5DUMP_TESTFILES/tcompound_complex.h5 +$SRC_H5DUMP_TESTFILES/tdatareg.h5 +$SRC_H5DUMP_TESTFILES/tdset.h5 +$SRC_H5DUMP_TESTFILES/tdset2.h5 +$SRC_H5DUMP_TESTFILES/tempty.h5 +$SRC_H5DUMP_TESTFILES/tenum.h5 +$SRC_H5DUMP_TESTFILES/textlink.h5 +$SRC_H5DUMP_TESTFILES/tfpformat.h5 +$SRC_H5DUMP_TESTFILES/tgroup.h5 +$SRC_H5DUMP_TESTFILES/thlink.h5 +$SRC_H5DUMP_TESTFILES/tloop.h5 +$SRC_H5DUMP_TESTFILES/tloop2.h5 +$SRC_H5DUMP_TESTFILES/tmany.h5 +$SRC_H5DUMP_TESTFILES/tname-amp.h5 +$SRC_H5DUMP_TESTFILES/tname-apos.h5 +$SRC_H5DUMP_TESTFILES/tname-gt.h5 +$SRC_H5DUMP_TESTFILES/tname-lt.h5 +$SRC_H5DUMP_TESTFILES/tname-quot.h5 +$SRC_H5DUMP_TESTFILES/tname-sp.h5 +$SRC_H5DUMP_TESTFILES/tnamed_dtype_attr.h5 +$SRC_H5DUMP_TESTFILES/tnestedcomp.h5 +$SRC_H5DUMP_TESTFILES/tnodata.h5 +$SRC_H5DUMP_TESTFILES/tobjref.h5 +$SRC_H5DUMP_TESTFILES/topaque.h5 +$SRC_H5DUMP_TESTFILES/torderattr.h5 +$SRC_H5DUMP_TESTFILES/tref.h5 +$SRC_H5DUMP_TESTFILES/tref-escapes.h5 +$SRC_H5DUMP_TESTFILES/tref-escapes-at.h5 +$SRC_H5DUMP_TESTFILES/tsaf.h5 +$SRC_H5DUMP_TESTFILES/tslink.h5 +$SRC_H5DUMP_TESTFILES/tstring.h5 +$SRC_H5DUMP_TESTFILES/tstring-at.h5 +$SRC_H5DUMP_TESTFILES/tstr.h5 +$SRC_H5DUMP_TESTFILES/tstr2.h5 +$SRC_H5DUMP_TESTFILES/tudlink.h5 +$SRC_H5DUMP_TESTFILES/tvldtypes1.h5 +$SRC_H5DUMP_TESTFILES/tvldtypes2.h5 +$SRC_H5DUMP_TESTFILES/tvldtypes3.h5 +$SRC_H5DUMP_TESTFILES/tvldtypes4.h5 +$SRC_H5DUMP_TESTFILES/tvldtypes5.h5 +$SRC_H5DUMP_TESTFILES/tvlstr.h5 +" + +LIST_OTHER_TEST_FILES_XML=" +$SRC_H5DUMP_TESTFILES/tall.h5.xml +$SRC_H5DUMP_TESTFILES/tall-2A.h5.xml +$SRC_H5DUMP_TESTFILES/tarray1.h5.xml +$SRC_H5DUMP_TESTFILES/tarray2.h5.xml +$SRC_H5DUMP_TESTFILES/tarray3.h5.xml +$SRC_H5DUMP_TESTFILES/tarray6.h5.xml +$SRC_H5DUMP_TESTFILES/tarray7.h5.xml +$SRC_H5DUMP_TESTFILES/tattr.h5.xml +$SRC_H5DUMP_TESTFILES/tbitfields.h5.xml +$SRC_H5DUMP_TESTFILES/tcompound_complex.h5.xml +$SRC_H5DUMP_TESTFILES/tcompound.h5.xml +$SRC_H5DUMP_TESTFILES/tcompound2.h5.xml +$SRC_H5DUMP_TESTFILES/tdatareg.h5.xml +$SRC_H5DUMP_TESTFILES/tdset.h5.xml +$SRC_H5DUMP_TESTFILES/tdset2.h5.xml +$SRC_H5DUMP_TESTFILES/tempty.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-dtd.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-dtd-2.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-dtd-uri.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-nons.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-nons-2.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-nons-uri.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-ns.h5.xml +$SRC_H5DUMP_TESTFILES/tempty-ns-2.h5.xml +$SRC_H5DUMP_TESTFILES/tenum.h5.xml +$SRC_H5DUMP_TESTFILES/textlink.h5.xml +$SRC_H5DUMP_TESTFILES/tfpformat.h5.xml +$SRC_H5DUMP_TESTFILES/tgroup.h5.xml +$SRC_H5DUMP_TESTFILES/thlink.h5.xml +$SRC_H5DUMP_TESTFILES/tloop.h5.xml +$SRC_H5DUMP_TESTFILES/tloop2.h5.xml +$SRC_H5DUMP_TESTFILES/tmany.h5.xml +$SRC_H5DUMP_TESTFILES/tname-amp.h5.xml +$SRC_H5DUMP_TESTFILES/tname-apos.h5.xml +$SRC_H5DUMP_TESTFILES/tnamed_dtype_attr.h5.xml +$SRC_H5DUMP_TESTFILES/tname-gt.h5.xml +$SRC_H5DUMP_TESTFILES/tname-lt.h5.xml +$SRC_H5DUMP_TESTFILES/tname-quot.h5.xml +$SRC_H5DUMP_TESTFILES/tname-sp.h5.xml +$SRC_H5DUMP_TESTFILES/tnestedcomp.h5.xml +$SRC_H5DUMP_TESTFILES/tnodata.h5.xml +$SRC_H5DUMP_TESTFILES/tobjref.h5.xml +$SRC_H5DUMP_TESTFILES/topaque.h5.xml +$SRC_H5DUMP_TESTFILES/torderattr1.h5.xml +$SRC_H5DUMP_TESTFILES/torderattr2.h5.xml +$SRC_H5DUMP_TESTFILES/torderattr3.h5.xml +$SRC_H5DUMP_TESTFILES/torderattr4.h5.xml +$SRC_H5DUMP_TESTFILES/tref.h5.xml +$SRC_H5DUMP_TESTFILES/tref-escapes.h5.xml +$SRC_H5DUMP_TESTFILES/tref-escapes-at.h5.xml +$SRC_H5DUMP_TESTFILES/tsaf.h5.xml +$SRC_H5DUMP_TESTFILES/tslink.h5.xml +$SRC_H5DUMP_TESTFILES/tstr.h5.xml +$SRC_H5DUMP_TESTFILES/tstr2.h5.xml +$SRC_H5DUMP_TESTFILES/tstring.h5.xml +$SRC_H5DUMP_TESTFILES/tstring-at.h5.xml +$SRC_H5DUMP_TESTFILES/tudlink.h5.xml +$SRC_H5DUMP_TESTFILES/tvldtypes1.h5.xml +$SRC_H5DUMP_TESTFILES/tvldtypes2.h5.xml +$SRC_H5DUMP_TESTFILES/tvldtypes3.h5.xml +$SRC_H5DUMP_TESTFILES/tvldtypes4.h5.xml +$SRC_H5DUMP_TESTFILES/tvldtypes5.h5.xml +$SRC_H5DUMP_TESTFILES/tvlstr.h5.xml +" + +# +# copy test files and expected output files from source dirs to test dir +# +COPY_TESTFILES="$LIST_HDF5_TEST_FILES_XML $LIST_OTHER_TEST_FILES_XML" + +COPY_TESTFILES_TO_TESTDIR() +{ + # copy test files. Used -f to make sure get a new copy + for tstfile in $COPY_TESTFILES + do + # ignore '#' comment + echo $tstfile | tr -d ' ' | grep '^#' > /dev/null + RET=$? + if [ $RET -eq 1 ]; then + if [ -a $tstfile ]; then + $CP -f $tstfile $TESTDIR + else + echo "Error: FAILED to copy $tstfile" + echo " $tstfile doesn't exist!" + exit $EXIT_FAILURE + fi + fi + done +} # Print a line-line message left justified in a field of 70 characters # beginning with the word "Testing". diff --git a/tools/h5import/CMakeLists.txt b/tools/h5import/CMakeLists.txt index 76dcf26..a96ebc4 100644 --- a/tools/h5import/CMakeLists.txt +++ b/tools/h5import/CMakeLists.txt @@ -52,7 +52,9 @@ IF (BUILD_TESTING) SET (HDF5_REFERENCE_TXT_FILES txtfp32.txt txtfp64.txt + txtuin16.txt txtuin32.txt + txtin8.txt txtin16.txt txtin32.txt textpfe64.txt @@ -203,19 +205,19 @@ IF (BUILD_TESTING) SET (last_test "H5IMPORT-h5importtest") # ----- TESTING "ASCII I32 rank 3 - Output BE " ; - ADD_H5_TEST (ASCII_I32 txtin16.txt txtin32.conf txtin32.h5) + ADD_H5_TEST (ASCII_I32 txtin32.txt txtin32.conf txtin32.h5) # ----- TESTING "ASCII I16 rank 3 - Output LE - CHUNKED - extended" ADD_H5_TEST (ASCII_I16 txtin16.txt txtin16.conf txtin16.h5) # ----- TESTING "ASCII I8 - rank 3 - Output I8 LE-Chunked+Extended+Compressed " - ADD_H5_TEST (ASCII_I8 txtin16.txt txtin8.conf txtin8.h5) + ADD_H5_TEST (ASCII_I8 txtin8.txt txtin8.conf txtin8.h5) # ----- TESTING "ASCII UI32 - rank 3 - Output BE" ADD_H5_TEST (ASCII_UI32 txtuin32.txt txtuin32.conf txtuin32.h5) # ----- TESTING "ASCII UI16 - rank 2 - Output LE+Chunked+Compressed " - ADD_H5_TEST (ASCII_UI16 txtuin32.txt txtuin16.conf txtuin16.h5) + ADD_H5_TEST (ASCII_UI16 txtuin16.txt txtuin16.conf txtuin16.h5) # ----- TESTING "ASCII F32 - rank 3 - Output LE " ADD_H5_TEST (ASCII_F32 txtfp32.txt txtfp32.conf txtfp32.h5) @@ -261,11 +263,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5import ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5import RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5import/h5importtestutil.sh b/tools/h5import/h5importtestutil.sh index 943b194..37613dd 100755 --- a/tools/h5import/h5importtestutil.sh +++ b/tools/h5import/h5importtestutil.sh @@ -94,7 +94,9 @@ $SRC_H5IMPORT_TESTFILES/textpfe.conf $SRC_H5IMPORT_TESTFILES/txtstr.conf $SRC_H5IMPORT_TESTFILES/txtfp32.txt $SRC_H5IMPORT_TESTFILES/txtfp64.txt +$SRC_H5IMPORT_TESTFILES/txtuin16.txt $SRC_H5IMPORT_TESTFILES/txtuin32.txt +$SRC_H5IMPORT_TESTFILES/txtin8.txt $SRC_H5IMPORT_TESTFILES/txtin16.txt $SRC_H5IMPORT_TESTFILES/txtin32.txt $SRC_H5IMPORT_TESTFILES/textpfe64.txt @@ -174,20 +176,20 @@ $RUNSERIAL ./h5importtest ################################################ TESTING "ASCII I32 rank 3 - Output BE " ; -TOOLTEST $TESTDIR/txtin16.txt -c $TESTDIR/txtin32.conf -o txtin32.h5 +TOOLTEST $TESTDIR/txtin32.txt -c $TESTDIR/txtin32.conf -o txtin32.h5 TESTING "ASCII I16 rank 3 - Output LE - CHUNKED - extended" TOOLTEST $TESTDIR/txtin16.txt -c $TESTDIR/txtin16.conf -o txtin16.h5 TESTING "ASCII I8 - rank 3 - Output I8 LE-Chunked+Extended+Compressed " -TOOLTEST $TESTDIR/txtin16.txt -c $TESTDIR/txtin8.conf -o txtin8.h5 +TOOLTEST $TESTDIR/txtin8.txt -c $TESTDIR/txtin8.conf -o txtin8.h5 TESTING "ASCII UI32 - rank 3 - Output BE" TOOLTEST $TESTDIR/txtuin32.txt -c $TESTDIR/txtuin32.conf -o txtuin32.h5 TESTING "ASCII UI16 - rank 2 - Output LE+Chunked+Compressed " -TOOLTEST $TESTDIR/txtuin32.txt -c $TESTDIR/txtuin16.conf -o txtuin16.h5 +TOOLTEST $TESTDIR/txtuin16.txt -c $TESTDIR/txtuin16.conf -o txtuin16.h5 TESTING "ASCII F32 - rank 3 - Output LE " TOOLTEST $TESTDIR/txtfp32.txt -c $TESTDIR/txtfp32.conf -o txtfp32.h5 @@ -230,7 +232,7 @@ TOOLTEST $TESTDIR/textpfe64.txt -c $TESTDIR/textpfe.conf -o textpfe.h5 -rm -f txtin32.txt txtin16.txt *.bin *.h5 +rm -f txtin32.txt txtin16.txt txtin8.txt txtuin32.txt txtuin16.txt *.bin *.h5 rm -rf tmp_testfiles else echo "** h5import or h5importtest not available ***" diff --git a/tools/h5import/testfiles/txtin8.txt b/tools/h5import/testfiles/txtin8.txt new file mode 100644 index 0000000..0688e9b --- /dev/null +++ b/tools/h5import/testfiles/txtin8.txt @@ -0,0 +1,15 @@ + 83 85 87 89 + 84 86 88 90 + 85 87 89 91 + 88 90 92 94 + 89 91 93 95 + 90 92 94 96 + 93 95 97 99 + 94 96 98 100 + 95 97 99 101 + 98 100 102 104 + 99 101 103 105 + 100 102 104 106 + 103 105 107 109 + 104 106 108 110 + 105 107 109 111 diff --git a/tools/h5import/testfiles/txtuin16.txt b/tools/h5import/testfiles/txtuin16.txt new file mode 100644 index 0000000..0688e9b --- /dev/null +++ b/tools/h5import/testfiles/txtuin16.txt @@ -0,0 +1,15 @@ + 83 85 87 89 + 84 86 88 90 + 85 87 89 91 + 88 90 92 94 + 89 91 93 95 + 90 92 94 96 + 93 95 97 99 + 94 96 98 100 + 95 97 99 101 + 98 100 102 104 + 99 101 103 105 + 100 102 104 106 + 103 105 107 109 + 104 106 108 110 + 105 107 109 111 diff --git a/tools/h5jam/CMakeLists.txt b/tools/h5jam/CMakeLists.txt index a03d139..d0bf30f 100644 --- a/tools/h5jam/CMakeLists.txt +++ b/tools/h5jam/CMakeLists.txt @@ -534,11 +534,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5jam ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5jam h5unjam RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5jam/h5jam.c b/tools/h5jam/h5jam.c index 981eead..52eb0aa 100644 --- a/tools/h5jam/h5jam.c +++ b/tools/h5jam/h5jam.c @@ -310,7 +310,7 @@ main (int argc, const char *argv[]) leave (EXIT_FAILURE); } - fsize = sbuf.st_size; + fsize = (off_t)sbuf.st_size; h5fid = HDopen(input_file, O_RDONLY, 0); if(h5fid < 0) { @@ -455,7 +455,7 @@ copy_some_to_file (int infid, int outfid, hsize_t startin, hsize_t startout, exit (EXIT_FAILURE); } - howmuch = sbuf.st_size; + howmuch = (ssize_t)sbuf.st_size; } else howmuch = limit; diff --git a/tools/h5jam/h5unjam.c b/tools/h5jam/h5unjam.c index 4751dad..c304045 100644 --- a/tools/h5jam/h5unjam.c +++ b/tools/h5jam/h5unjam.c @@ -243,6 +243,9 @@ main(int argc, const char *argv[]) H5Eget_auto2(H5E_DEFAULT, &func, &edata); H5Eset_auto2(H5E_DEFAULT, NULL, NULL); + /* Initialize h5tools lib */ + h5tools_init(); + parse_command_line(argc, argv); if (input_file == NULL) { diff --git a/tools/h5ls/CMakeLists.txt b/tools/h5ls/CMakeLists.txt index 0dec21c..81a6787 100644 --- a/tools/h5ls/CMakeLists.txt +++ b/tools/h5ls/CMakeLists.txt @@ -433,11 +433,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5ls ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5ls RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5ls/h5ls.c b/tools/h5ls/h5ls.c index e7a0304..19ae99a 100644 --- a/tools/h5ls/h5ls.c +++ b/tools/h5ls/h5ls.c @@ -1437,13 +1437,13 @@ dump_dataset_values(hid_t dset) info = &outputformat; ctx.indent_level = 2; - ctx.cur_column = curr_pos; + ctx.cur_column = (size_t)curr_pos; /* Print all the values. */ h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Data:\n"); h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, info->line_ncols, 0, 0); ctx.need_prefix = TRUE; - ctx.cur_column = curr_pos; + ctx.cur_column = (size_t)curr_pos; if (h5tools_dump_dset(rawoutstream, info, &ctx, dset, -1, NULL) < 0) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Unable to print data."); @@ -1620,7 +1620,7 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t UNUSED *ainfo, if(H5Aread(attr, p_type, buf) >= 0) { ctx.need_prefix = TRUE; ctx.indent_level = 2; - ctx.cur_column = curr_pos; + ctx.cur_column = (size_t)curr_pos; h5tools_dump_mem(rawoutstream, info, &ctx, attr, p_type, space, buf); } @@ -1673,11 +1673,9 @@ dataset_list1(hid_t dset) H5S_class_t space_type; /* type of dataspace */ int i; hsize_t curr_pos = 0; /* total data element position */ - h5tool_link_info_t lnk_info; h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -1754,7 +1752,6 @@ dataset_list2(hid_t dset, const char UNUSED *name) h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -1922,7 +1919,6 @@ datatype_list2(hid_t type, const char UNUSED *name) h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -1963,7 +1959,6 @@ list_obj(const char *name, const H5O_info_t *oinfo, const char *first_seen, void h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -2122,7 +2117,6 @@ list_lnk(const char *name, const H5L_info_t *linfo, void *_iter) h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -2310,11 +2304,9 @@ visit_obj(hid_t file, const char *oname, iter_t *iter) int retval = 0; H5O_info_t oi; /* Information for object */ hsize_t curr_pos = 0; /* total data element position */ - h5tool_link_info_t lnk_info; h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -2821,11 +2813,9 @@ main(int argc, const char *argv[]) /* Check the type of link given */ if(H5Lget_info(file, oname, &li, H5P_DEFAULT) < 0) { hsize_t curr_pos = 0; /* total data element position */ - h5tool_link_info_t lnk_info; h5tools_str_t buffer; /* string into which to render */ h5tools_context_t ctx; /* print context */ h5tool_format_t *info = &ls_dataformat; - h5tool_format_t outputformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); diff --git a/tools/h5repack/CMakeLists.txt b/tools/h5repack/CMakeLists.txt index ae7a658..ef5279d 100644 --- a/tools/h5repack/CMakeLists.txt +++ b/tools/h5repack/CMakeLists.txt @@ -875,11 +875,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5repack ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5repack RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/h5stat/CMakeLists.txt b/tools/h5stat/CMakeLists.txt index 8c621c9..1f19ca0 100644 --- a/tools/h5stat/CMakeLists.txt +++ b/tools/h5stat/CMakeLists.txt @@ -92,6 +92,9 @@ IF (BUILD_TESTING) # If using memchecker add tests without using scripts IF (HDF5_ENABLE_USING_MEMCHECKER) ADD_TEST (NAME H5STAT-${resultfile} COMMAND $ ${ARGN}) + IF (NOT ${resultcode} STREQUAL "0") + SET_TESTS_PROPERTIES (H5STAT-${resultfile} PROPERTIES WILL_FAIL "true") + ENDIF (NOT ${resultcode} STREQUAL "0") IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5STAT-${resultfile} PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") @@ -196,11 +199,14 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5stat ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5stat RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/lib/CMakeLists.txt b/tools/lib/CMakeLists.txt index 837a14e..6d48d5f 100644 --- a/tools/lib/CMakeLists.txt +++ b/tools/lib/CMakeLists.txt @@ -79,6 +79,9 @@ ENDIF (APPLE) # Add Target(s) to CMake Install for import into other projects #----------------------------------------------------------------------------- IF (HDF5_EXPORTED_TARGETS) + + INSTALL_TARGET_PDB (${HDF5_TOOLS_LIB_TARGET} ${HDF5_INSTALL_LIB_DIR} toolslibraries) + INSTALL ( TARGETS ${HDF5_TOOLS_LIB_TARGET} diff --git a/tools/lib/h5tools.c b/tools/lib/h5tools.c index 17639bc..24aa81a 100644 --- a/tools/lib/h5tools.c +++ b/tools/lib/h5tools.c @@ -1051,6 +1051,7 @@ void init_acc_pos(h5tools_context_t *ctx, hsize_t *dims) { int i; + unsigned j; HDassert(ctx->ndims); @@ -1058,8 +1059,8 @@ init_acc_pos(h5tools_context_t *ctx, hsize_t *dims) for (i = (ctx->ndims - 2); i >= 0; i--) { ctx->acc[i] = ctx->acc[i + 1] * dims[i + 1]; } - for (i = 0; i < ctx->ndims; i++) - ctx->pos[i] = 0; + for (j = 0; j < ctx->ndims; j++) + ctx->pos[j] = 0; } /*------------------------------------------------------------------------- @@ -1525,7 +1526,7 @@ render_bin_output_region_data_blocks(hid_t region_id, FILE *stream, if((type_size = H5Tget_size(type_id)) == 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); - if((region_buf = HDmalloc(type_size * numelem)) == NULL) + if((region_buf = HDmalloc(type_size * (size_t)numelem)) == NULL) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate region buffer"); /* Select (x , x , ..., x ) x (y , y , ..., y ) hyperslab for reading memory dataset */ @@ -1670,7 +1671,7 @@ render_bin_output_region_data_points(hid_t region_space, hid_t region_id, if((type_size = H5Tget_size(type_id)) == 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); - if((region_buf = HDmalloc(type_size * npoints)) == NULL) + if((region_buf = HDmalloc(type_size * (size_t)npoints)) == NULL) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for region"); /* Allocate space for the dimension array */ diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c index b54ed6a..ae43722 100644 --- a/tools/lib/h5tools_dump.c +++ b/tools/lib/h5tools_dump.c @@ -431,7 +431,7 @@ h5tools_print_region_data_blocks(hid_t region_id, hsize_t numelem; hsize_t numindex; size_t jndx; - int indx; + unsigned indx; int type_size; int ret_value = SUCCEED; hid_t mem_space = -1; @@ -467,7 +467,7 @@ h5tools_print_region_data_blocks(hid_t region_id, if((type_size = H5Tget_size(type_id)) == 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); - if((region_buf = HDmalloc(type_size * numelem)) == NULL) + if((region_buf = HDmalloc(type_size * (size_t)numelem)) == NULL) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate region buffer"); /* Select (x , x , ..., x ) x (y , y , ..., y ) hyperslab for reading memory dataset */ @@ -809,7 +809,7 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, if((type_size = H5Tget_size(type_id)) == 0) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Tget_size failed"); - if((region_buf = HDmalloc(type_size * npoints)) == NULL) + if((region_buf = HDmalloc(type_size * (size_t)npoints)) == NULL) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for region"); curr_pos = 0; @@ -1144,9 +1144,7 @@ h5tools_print_simple_subset(FILE *stream, const h5tool_format_t *info, h5tools_c size_row_block = sset->block.data[row_dim]; /* Check if we have VL data in the dataset's datatype */ - if (h5tools_detect_vlen_str(p_type) == TRUE) - vl_data = TRUE; - if (H5Tdetect_class(p_type, H5T_VLEN) == TRUE) + if (h5tools_detect_vlen(p_type) == TRUE) vl_data = TRUE; /* display loop */ @@ -1557,9 +1555,7 @@ h5tools_dump_simple_dset(FILE *stream, const h5tool_format_t *info, h5tools_cont } /* Check if we have VL data in the dataset's datatype */ - if (h5tools_detect_vlen_str(p_type) == TRUE) - vl_data = TRUE; - if (H5Tdetect_class(p_type, H5T_VLEN) == TRUE) + if (h5tools_detect_vlen(p_type) == TRUE) vl_data = TRUE; /* @@ -1676,7 +1672,7 @@ h5tools_dump_simple_mem(FILE *stream, const h5tool_format_t *info, h5tools_conte hid_t type, hid_t space, void *mem) { HERR_INIT(herr_t, SUCCEED) - int i; /*counters */ + unsigned i; /*counters */ hsize_t nelmts; /*total selected elmts */ ctx->ndims = H5Sget_simple_extent_ndims(space); @@ -2127,14 +2123,38 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_str_reset(buffer); h5tools_str_append(buffer, "%s ", STRPAD); - if (str_pad == H5T_STR_NULLTERM) - h5tools_str_append(buffer, "H5T_STR_NULLTERM;"); - else if (str_pad == H5T_STR_NULLPAD) - h5tools_str_append(buffer, "H5T_STR_NULLPAD;"); - else if (str_pad == H5T_STR_SPACEPAD) - h5tools_str_append(buffer, "H5T_STR_SPACEPAD;"); - else - h5tools_str_append(buffer, "H5T_STR_ERROR;"); + switch (str_pad) { + case H5T_STR_NULLTERM: + h5tools_str_append(buffer, "H5T_STR_NULLTERM;"); + break; + case H5T_STR_NULLPAD: + h5tools_str_append(buffer, "H5T_STR_NULLPAD;"); + break; + case H5T_STR_SPACEPAD: + h5tools_str_append(buffer, "H5T_STR_SPACEPAD;"); + break; + case H5T_STR_RESERVED_3: + case H5T_STR_RESERVED_4: + case H5T_STR_RESERVED_5: + case H5T_STR_RESERVED_6: + case H5T_STR_RESERVED_7: + case H5T_STR_RESERVED_8: + case H5T_STR_RESERVED_9: + case H5T_STR_RESERVED_10: + case H5T_STR_RESERVED_11: + case H5T_STR_RESERVED_12: + case H5T_STR_RESERVED_13: + case H5T_STR_RESERVED_14: + case H5T_STR_RESERVED_15: + h5tools_str_append(buffer, "H5T_STR_UNKNOWN;"); + break; + case H5T_STR_ERROR: + h5tools_str_append(buffer, "H5T_STR_ERROR;"); + break; + default: + h5tools_str_append(buffer, "ERROR;"); + break; + } h5tools_render_element(stream, info, ctx, buffer, &curr_pos, ncols, 0, 0); ctx->need_prefix = TRUE; @@ -2144,10 +2164,35 @@ h5tools_print_datatype(FILE *stream, h5tools_str_t *buffer, const h5tool_format_ h5tools_str_append(buffer, "%s ", CSET); - if (cset == H5T_CSET_ASCII) - h5tools_str_append(buffer, "H5T_CSET_ASCII;"); - else - h5tools_str_append(buffer, "unknown_cset;"); + switch (cset) { + case H5T_CSET_ASCII: + h5tools_str_append(buffer, "H5T_CSET_ASCII;"); + break; + case H5T_CSET_UTF8: + h5tools_str_append(buffer, "H5T_CSET_UTF8;"); + break; + case H5T_CSET_RESERVED_2: + case H5T_CSET_RESERVED_3: + case H5T_CSET_RESERVED_4: + case H5T_CSET_RESERVED_5: + case H5T_CSET_RESERVED_6: + case H5T_CSET_RESERVED_7: + case H5T_CSET_RESERVED_8: + case H5T_CSET_RESERVED_9: + case H5T_CSET_RESERVED_10: + case H5T_CSET_RESERVED_11: + case H5T_CSET_RESERVED_12: + case H5T_CSET_RESERVED_13: + case H5T_CSET_RESERVED_14: + case H5T_CSET_RESERVED_15: + h5tools_str_append(buffer, "H5T_CSET_UNKNOWN;"); + case H5T_CSET_ERROR: + h5tools_str_append(buffer, "H5T_CSET_ERROR;"); + break; + default: + h5tools_str_append(buffer, "ERROR;"); + break; + } h5tools_render_element(stream, info, ctx, buffer, &curr_pos, ncols, 0, 0); ctx->need_prefix = TRUE; @@ -2853,7 +2898,6 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, hsize_t size; /* size of external file */ hsize_t storage_size; hsize_t curr_pos = 0; /* total data element position */ - hsize_t elmt_counter = 0;/* counts the # elements printed.*/ haddr_t ioffset; h5tools_str_t buffer; /* string into which to render */ @@ -3379,7 +3423,6 @@ h5tools_dump_comment(FILE *stream, const h5tool_format_t *info, size_t buf_size = 0; size_t ncols = 80; /* available output width */ h5tools_str_t buffer; /* string into which to render */ - hsize_t elmt_counter = 0;/* counts the # elements printed.*/ hsize_t curr_pos = ctx->sm_pos; /* total data element position */ /* pass to the prefix in h5tools_simple_prefix the total position * instead of the current stripmine position i; this is necessary @@ -3433,7 +3476,6 @@ h5tools_dump_attribute(FILE *stream, const h5tool_format_t *info, { h5tools_str_t buffer; /* string into which to render */ size_t ncols = 80; /* available output width */ - hsize_t elmt_counter = 0;/* counts the # elements printed.*/ hsize_t curr_pos = ctx->sm_pos; /* total data element position */ /* pass to the prefix in h5tools_simple_prefix the total position * instead of the current stripmine position i; this is necessary @@ -3812,9 +3854,7 @@ h5tools_dump_data(FILE *stream, const h5tool_format_t *info, ndims = H5Sget_simple_extent_dims(space, size, NULL); /* Check if we have VL data in the dataset's datatype */ - if (h5tools_detect_vlen_str(p_type) == TRUE) - vl_data = TRUE; - if (H5Tdetect_class(p_type, H5T_VLEN) == TRUE) + if (h5tools_detect_vlen(p_type) == TRUE) vl_data = TRUE; for (i = 0; i < ndims; i++) diff --git a/tools/misc/CMakeLists.txt b/tools/misc/CMakeLists.txt index 72930c9..1c6e909 100644 --- a/tools/misc/CMakeLists.txt +++ b/tools/misc/CMakeLists.txt @@ -311,11 +311,16 @@ ENDIF (BUILD_TESTING) #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- + +INSTALL_PROGRAM_PDB (h5debug ${HDF5_INSTALL_BIN_DIR} toolsapplications) +INSTALL_PROGRAM_PDB (h5repart ${HDF5_INSTALL_BIN_DIR} toolsapplications) +INSTALL_PROGRAM_PDB (h5mkgrp ${HDF5_INSTALL_BIN_DIR} toolsapplications) + INSTALL ( TARGETS h5debug h5repart h5mkgrp RUNTIME DESTINATION - ${HDF5_INSTALL_BIN_DIR}/tools + ${HDF5_INSTALL_BIN_DIR} COMPONENT toolsapplications ) diff --git a/tools/misc/h5debug.c b/tools/misc/h5debug.c index 2a7d73f..02c451b 100644 --- a/tools/misc/h5debug.c +++ b/tools/misc/h5debug.c @@ -23,35 +23,35 @@ * *------------------------------------------------------------------------- */ -#define H5A_PACKAGE /*suppress error about including H5Apkg */ -#define H5B2_PACKAGE /*suppress error about including H5B2pkg */ -#define H5B2_TESTING /*suppress warning about H5B2 testing funcs*/ -#define H5D_PACKAGE /*suppress error about including H5Dpkg */ -#define H5EA_PACKAGE /*suppress error about including H5EApkg */ -#define H5EA_TESTING /*suppress warning about H5EA testing funcs*/ -#define H5FA_PACKAGE /*suppress error about including H5FApkg */ -#define H5FA_TESTING /*suppress warning about H5FA testing funcs*/ -#define H5F_PACKAGE /*suppress error about including H5Fpkg */ -#define H5G_PACKAGE /*suppress error about including H5Gpkg */ -#define H5HF_PACKAGE /*suppress error about including H5HFpkg */ -#define H5O_PACKAGE /*suppress error about including H5Opkg */ -#define H5SM_PACKAGE /*suppress error about including H5SMpkg */ - -#include "H5private.h" /* Generic Functions */ -#include "H5Apkg.h" /* Attributes */ -#include "H5B2pkg.h" /* v2 B-trees */ -#include "H5Dpkg.h" /* Datasets */ -#include "H5Eprivate.h" /* Error handling */ -#include "H5EApkg.h" /* Extensible Arrays */ -#include "H5FApkg.h" /* Fixed Arrays */ -#include "H5Fpkg.h" /* File access */ -#include "H5FSprivate.h" /* Free space manager */ -#include "H5Gpkg.h" /* Groups */ -#include "H5HFpkg.h" /* Fractal heaps */ -#include "H5HGprivate.h" /* Global Heaps */ -#include "H5Iprivate.h" /* IDs */ -#include "H5Opkg.h" /* Object headers */ -#include "H5SMpkg.h" /* Implicitly shared messages */ +#define H5A_PACKAGE /*suppress error about including H5Apkg */ +#define H5B2_PACKAGE /*suppress error about including H5B2pkg */ +#define H5B2_TESTING /*suppress warning about H5B2 testing funcs*/ +#define H5D_PACKAGE /*suppress error about including H5Dpkg */ +#define H5EA_PACKAGE /*suppress error about including H5EApkg */ +#define H5EA_TESTING /*suppress warning about H5EA testing funcs*/ +#define H5FA_PACKAGE /*suppress error about including H5FApkg */ +#define H5FA_TESTING /*suppress warning about H5FA testing funcs*/ +#define H5F_PACKAGE /*suppress error about including H5Fpkg */ +#define H5G_PACKAGE /*suppress error about including H5Gpkg */ +#define H5HF_PACKAGE /*suppress error about including H5HFpkg */ +#define H5O_PACKAGE /*suppress error about including H5Opkg */ +#define H5SM_PACKAGE /*suppress error about including H5SMpkg */ + +#include "H5private.h" /* Generic Functions */ +#include "H5Apkg.h" /* Attributes */ +#include "H5B2pkg.h" /* v2 B-trees */ +#include "H5Dpkg.h" /* Datasets */ +#include "H5Eprivate.h" /* Error handling */ +#include "H5EApkg.h" /* Extensible Arrays */ +#include "H5FApkg.h" /* Fixed Arrays */ +#include "H5Fpkg.h" /* File access */ +#include "H5FSprivate.h" /* Free space manager */ +#include "H5Gpkg.h" /* Groups */ +#include "H5HFpkg.h" /* Fractal heaps */ +#include "H5HGprivate.h" /* Global Heaps */ +#include "H5Iprivate.h" /* IDs */ +#include "H5Opkg.h" /* Object headers */ +#include "H5SMpkg.h" /* Implicitly shared messages */ /* File drivers */ #include "H5FDfamily.h" diff --git a/tools/testfiles/charsets.ddl b/tools/testfiles/charsets.ddl new file mode 100644 index 0000000..c2301fb --- /dev/null +++ b/tools/testfiles/charsets.ddl @@ -0,0 +1,27 @@ +HDF5 "charsets.h5" { +GROUP "/" { + DATASET "CharSets" { + DATATYPE H5T_COMPOUND { + H5T_STRING { + STRSIZE H5T_VARIABLE; + STRPAD H5T_STR_NULLTERM; + CSET H5T_CSET_ASCII; + CTYPE H5T_C_S1; + } "ascii"; + H5T_STRING { + STRSIZE H5T_VARIABLE; + STRPAD H5T_STR_NULLTERM; + CSET H5T_CSET_UTF8; + CTYPE H5T_C_S1; + } "utf8"; + } + DATASPACE SIMPLE { ( 1 ) / ( 1 ) } + DATA { + (0): { + "ascii", + "utf8" + } + } + } +} +} diff --git a/tools/testfiles/charsets.h5 b/tools/testfiles/charsets.h5 new file mode 100644 index 0000000..2b9e735 Binary files /dev/null and b/tools/testfiles/charsets.h5 differ diff --git a/tools/testfiles/tattrintsize.ddl b/tools/testfiles/tattrintsize.ddl new file mode 100644 index 0000000..638384e --- /dev/null +++ b/tools/testfiles/tattrintsize.ddl @@ -0,0 +1,569 @@ +HDF5 "tattrintsize.h5" { +GROUP "/" { + ATTRIBUTE "DS08BITS" { + DATATYPE H5T_STD_I8LE + DATASPACE SIMPLE { ( 8, 8 ) / ( 8, 8 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, + (1,0): -2, -4, -8, -16, -32, -64, -128, 0, + (2,0): -4, -8, -16, -32, -64, -128, 0, 0, + (3,0): -8, -16, -32, -64, -128, 0, 0, 0, + (4,0): -16, -32, -64, -128, 0, 0, 0, 0, + (5,0): -32, -64, -128, 0, 0, 0, 0, 0, + (6,0): -64, -128, 0, 0, 0, 0, 0, 0, + (7,0): -128, 0, 0, 0, 0, 0, 0, 0 + } + } + ATTRIBUTE "DS16BITS" { + DATATYPE H5T_STD_I16LE + DATASPACE SIMPLE { ( 8, 16 ) / ( 8, 16 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (0,12): -4096, -8192, -16384, -32768, + (1,0): -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (1,11): -4096, -8192, -16384, -32768, 0, + (2,0): -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, + (2,11): -8192, -16384, -32768, 0, 0, + (3,0): -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (3,11): -16384, -32768, 0, 0, 0, + (4,0): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (4,10): -16384, -32768, 0, 0, 0, 0, + (5,0): -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (5,10): -32768, 0, 0, 0, 0, 0, + (6,0): -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (6,9): -32768, 0, 0, 0, 0, 0, 0, + (7,0): -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, 0, + (7,10): 0, 0, 0, 0, 0, 0 + } + } + ATTRIBUTE "DS32BITS" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 8, 32 ) / ( 8, 32 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (0,12): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (0,19): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (0,25): -33554432, -67108864, -134217728, -268435456, -536870912, + (0,30): -1073741824, -2147483648, + (1,0): -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (1,11): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (1,18): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (1,24): -33554432, -67108864, -134217728, -268435456, -536870912, + (1,29): -1073741824, -2147483648, 0, + (2,0): -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, + (2,11): -8192, -16384, -32768, -65536, -131072, -262144, -524288, + (2,18): -1048576, -2097152, -4194304, -8388608, -16777216, -33554432, + (2,24): -67108864, -134217728, -268435456, -536870912, -1073741824, + (2,29): -2147483648, 0, 0, + (3,0): -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (3,11): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (3,18): -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, + (3,24): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (3,29): 0, 0, 0, + (4,0): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (4,10): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (4,17): -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, + (4,23): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (4,28): 0, 0, 0, 0, + (5,0): -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (5,10): -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, + (5,17): -4194304, -8388608, -16777216, -33554432, -67108864, + (5,22): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (5,27): 0, 0, 0, 0, 0, + (6,0): -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (6,9): -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, + (6,16): -4194304, -8388608, -16777216, -33554432, -67108864, + (6,21): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (6,26): 0, 0, 0, 0, 0, 0, + (7,0): -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, + (7,9): -65536, -131072, -262144, -524288, -1048576, -2097152, -4194304, + (7,16): -8388608, -16777216, -33554432, -67108864, -134217728, + (7,21): -268435456, -536870912, -1073741824, -2147483648, 0, 0, 0, 0, + (7,29): 0, 0, 0 + } + } + ATTRIBUTE "DS64BITS" { + DATATYPE H5T_STD_I64LE + DATASPACE SIMPLE { ( 8, 64 ) / ( 8, 64 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (0,12): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (0,19): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (0,25): -33554432, -67108864, -134217728, -268435456, -536870912, + (0,30): -1073741824, -2147483648, -4294967296, -8589934592, + (0,34): -17179869184, -34359738368, -68719476736, -137438953472, + (0,38): -274877906944, -549755813888, -1099511627776, -2199023255552, + (0,42): -4398046511104, -8796093022208, -17592186044416, + (0,45): -35184372088832, -70368744177664, -140737488355328, + (0,48): -281474976710656, -562949953421312, -1125899906842624, + (0,51): -2251799813685248, -4503599627370496, -9007199254740992, + (0,54): -18014398509481984, -36028797018963968, -72057594037927936, + (0,57): -144115188075855872, -288230376151711744, -576460752303423488, + (0,60): -1152921504606846976, -2305843009213693952, + (0,62): -4611686018427387904, -9223372036854775808, + (1,0): -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (1,11): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (1,18): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (1,24): -33554432, -67108864, -134217728, -268435456, -536870912, + (1,29): -1073741824, -2147483648, -4294967296, -8589934592, + (1,33): -17179869184, -34359738368, -68719476736, -137438953472, + (1,37): -274877906944, -549755813888, -1099511627776, -2199023255552, + (1,41): -4398046511104, -8796093022208, -17592186044416, + (1,44): -35184372088832, -70368744177664, -140737488355328, + (1,47): -281474976710656, -562949953421312, -1125899906842624, + (1,50): -2251799813685248, -4503599627370496, -9007199254740992, + (1,53): -18014398509481984, -36028797018963968, -72057594037927936, + (1,56): -144115188075855872, -288230376151711744, -576460752303423488, + (1,59): -1152921504606846976, -2305843009213693952, + (1,61): -4611686018427387904, -9223372036854775808, 0, + (2,0): -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, + (2,11): -8192, -16384, -32768, -65536, -131072, -262144, -524288, + (2,18): -1048576, -2097152, -4194304, -8388608, -16777216, -33554432, + (2,24): -67108864, -134217728, -268435456, -536870912, -1073741824, + (2,29): -2147483648, -4294967296, -8589934592, -17179869184, + (2,33): -34359738368, -68719476736, -137438953472, -274877906944, + (2,37): -549755813888, -1099511627776, -2199023255552, -4398046511104, + (2,41): -8796093022208, -17592186044416, -35184372088832, + (2,44): -70368744177664, -140737488355328, -281474976710656, + (2,47): -562949953421312, -1125899906842624, -2251799813685248, + (2,50): -4503599627370496, -9007199254740992, -18014398509481984, + (2,53): -36028797018963968, -72057594037927936, -144115188075855872, + (2,56): -288230376151711744, -576460752303423488, -1152921504606846976, + (2,59): -2305843009213693952, -4611686018427387904, + (2,61): -9223372036854775808, 0, 0, + (3,0): -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (3,11): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (3,18): -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, + (3,24): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (3,29): -4294967296, -8589934592, -17179869184, -34359738368, + (3,33): -68719476736, -137438953472, -274877906944, -549755813888, + (3,37): -1099511627776, -2199023255552, -4398046511104, -8796093022208, + (3,41): -17592186044416, -35184372088832, -70368744177664, + (3,44): -140737488355328, -281474976710656, -562949953421312, + (3,47): -1125899906842624, -2251799813685248, -4503599627370496, + (3,50): -9007199254740992, -18014398509481984, -36028797018963968, + (3,53): -72057594037927936, -144115188075855872, -288230376151711744, + (3,56): -576460752303423488, -1152921504606846976, + (3,58): -2305843009213693952, -4611686018427387904, + (3,60): -9223372036854775808, 0, 0, 0, + (4,0): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (4,10): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (4,17): -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, + (4,23): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (4,28): -4294967296, -8589934592, -17179869184, -34359738368, + (4,32): -68719476736, -137438953472, -274877906944, -549755813888, + (4,36): -1099511627776, -2199023255552, -4398046511104, -8796093022208, + (4,40): -17592186044416, -35184372088832, -70368744177664, + (4,43): -140737488355328, -281474976710656, -562949953421312, + (4,46): -1125899906842624, -2251799813685248, -4503599627370496, + (4,49): -9007199254740992, -18014398509481984, -36028797018963968, + (4,52): -72057594037927936, -144115188075855872, -288230376151711744, + (4,55): -576460752303423488, -1152921504606846976, + (4,57): -2305843009213693952, -4611686018427387904, + (4,59): -9223372036854775808, 0, 0, 0, 0, + (5,0): -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (5,10): -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, + (5,17): -4194304, -8388608, -16777216, -33554432, -67108864, + (5,22): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (5,27): -4294967296, -8589934592, -17179869184, -34359738368, + (5,31): -68719476736, -137438953472, -274877906944, -549755813888, + (5,35): -1099511627776, -2199023255552, -4398046511104, -8796093022208, + (5,39): -17592186044416, -35184372088832, -70368744177664, + (5,42): -140737488355328, -281474976710656, -562949953421312, + (5,45): -1125899906842624, -2251799813685248, -4503599627370496, + (5,48): -9007199254740992, -18014398509481984, -36028797018963968, + (5,51): -72057594037927936, -144115188075855872, -288230376151711744, + (5,54): -576460752303423488, -1152921504606846976, + (5,56): -2305843009213693952, -4611686018427387904, + (5,58): -9223372036854775808, 0, 0, 0, 0, 0, + (6,0): -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (6,9): -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, + (6,16): -4194304, -8388608, -16777216, -33554432, -67108864, + (6,21): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (6,26): -4294967296, -8589934592, -17179869184, -34359738368, + (6,30): -68719476736, -137438953472, -274877906944, -549755813888, + (6,34): -1099511627776, -2199023255552, -4398046511104, -8796093022208, + (6,38): -17592186044416, -35184372088832, -70368744177664, + (6,41): -140737488355328, -281474976710656, -562949953421312, + (6,44): -1125899906842624, -2251799813685248, -4503599627370496, + (6,47): -9007199254740992, -18014398509481984, -36028797018963968, + (6,50): -72057594037927936, -144115188075855872, -288230376151711744, + (6,53): -576460752303423488, -1152921504606846976, + (6,55): -2305843009213693952, -4611686018427387904, + (6,57): -9223372036854775808, 0, 0, 0, 0, 0, 0, + (7,0): -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, + (7,9): -65536, -131072, -262144, -524288, -1048576, -2097152, -4194304, + (7,16): -8388608, -16777216, -33554432, -67108864, -134217728, + (7,21): -268435456, -536870912, -1073741824, -2147483648, -4294967296, + (7,26): -8589934592, -17179869184, -34359738368, -68719476736, + (7,30): -137438953472, -274877906944, -549755813888, -1099511627776, + (7,34): -2199023255552, -4398046511104, -8796093022208, + (7,37): -17592186044416, -35184372088832, -70368744177664, + (7,40): -140737488355328, -281474976710656, -562949953421312, + (7,43): -1125899906842624, -2251799813685248, -4503599627370496, + (7,46): -9007199254740992, -18014398509481984, -36028797018963968, + (7,49): -72057594037927936, -144115188075855872, -288230376151711744, + (7,52): -576460752303423488, -1152921504606846976, + (7,54): -2305843009213693952, -4611686018427387904, + (7,56): -9223372036854775808, 0, 0, 0, 0, 0, 0, 0 + } + } + ATTRIBUTE "DU08BITS" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 8, 8 ) / ( 8, 8 ) } + DATA { + (0,0): 255, 254, 252, 248, 240, 224, 192, 128, + (1,0): 254, 252, 248, 240, 224, 192, 128, 0, + (2,0): 252, 248, 240, 224, 192, 128, 0, 0, + (3,0): 248, 240, 224, 192, 128, 0, 0, 0, + (4,0): 240, 224, 192, 128, 0, 0, 0, 0, + (5,0): 224, 192, 128, 0, 0, 0, 0, 0, + (6,0): 192, 128, 0, 0, 0, 0, 0, 0, + (7,0): 128, 0, 0, 0, 0, 0, 0, 0 + } + } + ATTRIBUTE "DU16BITS" { + DATATYPE H5T_STD_U16LE + DATASPACE SIMPLE { ( 8, 16 ) / ( 8, 16 ) } + DATA { + (0,0): 65535, 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, + (0,9): 65024, 64512, 63488, 61440, 57344, 49152, 32768, + (1,0): 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, + (1,9): 64512, 63488, 61440, 57344, 49152, 32768, 0, + (2,0): 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, + (2,9): 63488, 61440, 57344, 49152, 32768, 0, 0, + (3,0): 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, + (3,9): 61440, 57344, 49152, 32768, 0, 0, 0, + (4,0): 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, + (4,9): 57344, 49152, 32768, 0, 0, 0, 0, + (5,0): 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, + (5,9): 49152, 32768, 0, 0, 0, 0, 0, + (6,0): 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, + (6,9): 32768, 0, 0, 0, 0, 0, 0, + (7,0): 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, + (7,9): 0, 0, 0, 0, 0, 0, 0 + } + } + ATTRIBUTE "DU32BITS" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 8, 32 ) / ( 8, 32 ) } + DATA { + (0,0): 4294967295, 4294967294, 4294967292, 4294967288, 4294967280, + (0,5): 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, + (0,10): 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, + (0,15): 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, + (0,20): 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, + (0,25): 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, + (0,30): 3221225472, 2147483648, + (1,0): 4294967294, 4294967292, 4294967288, 4294967280, 4294967264, + (1,5): 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, + (1,10): 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, + (1,15): 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, + (1,20): 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, + (1,25): 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, + (1,30): 2147483648, 0, + (2,0): 4294967292, 4294967288, 4294967280, 4294967264, 4294967232, + (2,5): 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, + (2,10): 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, + (2,15): 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, + (2,20): 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, + (2,25): 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, + (2,31): 0, + (3,0): 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, + (3,5): 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, + (3,10): 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, + (3,15): 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, + (3,20): 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, + (3,25): 4026531840, 3758096384, 3221225472, 2147483648, 0, 0, 0, + (4,0): 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, + (4,5): 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, + (4,10): 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, + (4,15): 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, + (4,20): 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, + (4,25): 3758096384, 3221225472, 2147483648, 0, 0, 0, 0, + (5,0): 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, + (5,5): 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, + (5,10): 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, + (5,15): 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, + (5,20): 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, + (5,25): 3221225472, 2147483648, 0, 0, 0, 0, 0, + (6,0): 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, + (6,5): 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, + (6,10): 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, + (6,15): 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, + (6,20): 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, + (6,25): 2147483648, 0, 0, 0, 0, 0, 0, + (7,0): 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, + (7,5): 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, + (7,10): 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, + (7,15): 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, + (7,20): 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, + (7,26): 0, 0, 0, 0, 0, 0 + } + } + ATTRIBUTE "DU64BITS" { + DATATYPE H5T_STD_U64LE + DATASPACE SIMPLE { ( 8, 64 ) / ( 8, 64 ) } + DATA { + (0,0): 18446744073709551615, 18446744073709551614, + (0,2): 18446744073709551612, 18446744073709551608, + (0,4): 18446744073709551600, 18446744073709551584, + (0,6): 18446744073709551552, 18446744073709551488, + (0,8): 18446744073709551360, 18446744073709551104, + (0,10): 18446744073709550592, 18446744073709549568, + (0,12): 18446744073709547520, 18446744073709543424, + (0,14): 18446744073709535232, 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(1,62): 9223372036854775808, 0, + (2,0): 18446744073709551612, 18446744073709551608, + (2,2): 18446744073709551600, 18446744073709551584, + (2,4): 18446744073709551552, 18446744073709551488, + (2,6): 18446744073709551360, 18446744073709551104, + (2,8): 18446744073709550592, 18446744073709549568, + (2,10): 18446744073709547520, 18446744073709543424, + (2,12): 18446744073709535232, 18446744073709518848, + (2,14): 18446744073709486080, 18446744073709420544, + (2,16): 18446744073709289472, 18446744073709027328, + (2,18): 18446744073708503040, 18446744073707454464, + (2,20): 18446744073705357312, 18446744073701163008, + (2,22): 18446744073692774400, 18446744073675997184, + (2,24): 18446744073642442752, 18446744073575333888, + (2,26): 18446744073441116160, 18446744073172680704, + (2,28): 18446744072635809792, 18446744071562067968, + (2,30): 18446744069414584320, 18446744065119617024, + (2,32): 18446744056529682432, 18446744039349813248, + (2,34): 18446744004990074880, 18446743936270598144, + 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1.0002, 1.0003, 1.0004, 1.0005, 1.0006, 1.0007, + (2,0): 2, 2.0001, 2.0002, 2.0003, 2.0004, 2.0005, 2.0006, 2.0007, + (3,0): 3, 3.0001, 3.0002, 3.0003, 3.0004, 3.0005, 3.0006, 3.0007, + (4,0): 4, 4.0001, 4.0002, 4.0003, 4.0004, 4.0005, 4.0006, 4.0007, + (5,0): 5, 5.0001, 5.0002, 5.0003, 5.0004, 5.0005, 5.0006, 5.0007, + (6,0): 6, 6.0001, 6.0002, 6.0003, 6.0004, 6.0005, 6.0006, 6.0007, + (7,0): 7, 7.0001, 7.0002, 7.0003, 7.0004, 7.0005, 7.0006, 7.0007 + } + } +} +} diff --git a/tools/testfiles/tattrintsize.h5 b/tools/testfiles/tattrintsize.h5 new file mode 100644 index 0000000..04d6f4c Binary files /dev/null and b/tools/testfiles/tattrintsize.h5 differ diff --git a/tools/testfiles/tcmpdattrintsize.ddl b/tools/testfiles/tcmpdattrintsize.ddl new file mode 100644 index 0000000..17b5b77 --- /dev/null +++ b/tools/testfiles/tcmpdattrintsize.ddl @@ -0,0 +1,316 @@ +HDF5 "tcmpdattrintsize.h5" { +GROUP "/" { + ATTRIBUTE "CompoundAttrIntSize" { + DATATYPE H5T_COMPOUND { + H5T_ARRAY { [8][8] H5T_STD_U8LE } "DU08BITS"; + H5T_ARRAY { [8][16] H5T_STD_U16LE } "DU16BITS"; + H5T_ARRAY { [8][32] H5T_STD_U32LE } "DU32BITS"; + H5T_ARRAY { [8][64] H5T_STD_U64LE } "DU64BITS"; + H5T_ARRAY { [8][8] H5T_STD_I8LE } "DS08BITS"; + H5T_ARRAY { [8][16] H5T_STD_I16LE } "DS16BITS"; + H5T_ARRAY { [8][32] H5T_STD_I32LE } "DS32BITS"; + H5T_ARRAY { [8][64] H5T_STD_I64LE } "DS64BITS"; + H5T_ARRAY { [8][8] H5T_IEEE_F64LE } "DummyDBL"; + } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): { + [ 255, 254, 252, 248, 240, 224, 192, 128, + 254, 252, 248, 240, 224, 192, 128, 0, + 252, 248, 240, 224, 192, 128, 0, 0, + 248, 240, 224, 192, 128, 0, 0, 0, + 240, 224, 192, 128, 0, 0, 0, 0, + 224, 192, 128, 0, 0, 0, 0, 0, + 192, 128, 0, 0, 0, 0, 0, 0, + 128, 0, 0, 0, 0, 0, 0, 0 ], + [ 65535, 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, + 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, + 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index 0000000..40d4887 Binary files /dev/null and b/tools/testfiles/tcmpdattrintsize.h5 differ diff --git a/tools/testfiles/tcmpdintsize.ddl b/tools/testfiles/tcmpdintsize.ddl new file mode 100644 index 0000000..ba296e1 --- /dev/null +++ b/tools/testfiles/tcmpdintsize.ddl @@ -0,0 +1,316 @@ +HDF5 "tcmpdintsize.h5" { +GROUP "/" { + DATASET "CompoundIntSize" { + DATATYPE H5T_COMPOUND { + H5T_ARRAY { [8][8] H5T_STD_U8LE } "DU08BITS"; + H5T_ARRAY { [8][16] H5T_STD_U16LE } "DU16BITS"; + H5T_ARRAY { [8][32] H5T_STD_U32LE } "DU32BITS"; + H5T_ARRAY { [8][64] H5T_STD_U64LE } "DU64BITS"; + H5T_ARRAY { [8][8] H5T_STD_I8LE } "DS08BITS"; + H5T_ARRAY { [8][16] H5T_STD_I16LE } "DS16BITS"; + H5T_ARRAY { [8][32] H5T_STD_I32LE } "DS32BITS"; + H5T_ARRAY { [8][64] H5T_STD_I64LE } "DS64BITS"; + H5T_ARRAY { [8][8] H5T_IEEE_F64LE } "DummyDBL"; + } + DATASPACE SIMPLE { ( 4 ) / ( 4 ) } + DATA { + (0): { + [ 255, 254, 252, 248, 240, 224, 192, 128, + 254, 252, 248, 240, 224, 192, 128, 0, + 252, 248, 240, 224, 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4.0005, 4.0006, 4.0007, + 5, 5.0001, 5.0002, 5.0003, 5.0004, 5.0005, 5.0006, 5.0007, + 6, 6.0001, 6.0002, 6.0003, 6.0004, 6.0005, 6.0006, 6.0007, + 7, 7.0001, 7.0002, 7.0003, 7.0004, 7.0005, 7.0006, 7.0007 ] + } + } + } +} +} diff --git a/tools/testfiles/tcmpdintsize.h5 b/tools/testfiles/tcmpdintsize.h5 new file mode 100644 index 0000000..0e7bef5 Binary files /dev/null and b/tools/testfiles/tcmpdintsize.h5 differ diff --git a/tools/testfiles/tdset_idx.ls b/tools/testfiles/tdset_idx.ls deleted file mode 100644 index daa14b2..0000000 --- a/tools/testfiles/tdset_idx.ls +++ /dev/null @@ -1,36 +0,0 @@ -dset_btree Dataset {20/200, 10/100} - Data: - (0,0) 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, - (2,2) 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, - (4,4) 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, - (6,6) 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, - (8,8) 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, - (11,0) 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, - (13,2) 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, - (15,4) 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, - (17,6) 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, - (19,8) 8, 9 -dset_filter Dataset {20, 10} - Data: - (0,0) 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, - (2,2) 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, - (4,4) 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, - (6,6) 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, - (8,8) 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, - (11,0) 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, - (13,2) 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, - (15,4) 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, - (17,6) 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, - (19,8) 8, 9 -dset_fixed Dataset {20, 10} - Data: - (0,0) 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, - (2,2) 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, - (4,4) 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, - (6,6) 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, - (8,8) 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, - (11,0) 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, - (13,2) 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, - (15,4) 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, - (17,6) 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, 1, 2, 3, 4, 5, 6, 7, - (19,8) 8, 9 diff --git a/windows/src/H5pubconf.h b/windows/src/H5pubconf.h index 75313d7..32c1dee 100644 --- a/windows/src/H5pubconf.h +++ b/windows/src/H5pubconf.h @@ -443,7 +443,7 @@ #define H5_HAVE_WINDOW_PATH 1 /* Define to 1 if you have the header file. */ -#define H5_HAVE_WINSOCK_H 1 +#define H5_HAVE_WINSOCK2_H 1 /* Define to 1 if you have the header file. */ #define H5_HAVE_ZLIB_H 1 -- cgit v0.12