From b12565b8151eae7c97f1a3cb2ed05e9c30cf6cf6 Mon Sep 17 00:00:00 2001 From: vchoi Date: Tue, 4 Jan 2022 16:57:20 -0600 Subject: (A) Address issue #2 and issue #4 of the group test failures. See Kent's documentation "Designed to Fail Tests and Issues". (a) Fix for issue #2: --Print out meaningful message about max_lag when there is checksum error in loading an entry via H5C__load_entry(). --H5C.c: H5C_protect() (b) Fix for issue #4: --Allocate more space when the copy of the index read from the metadata file is bigger than the existing size --H5Fvfd_swmr.c: H5F_vfd_swmr_reader_end_of_tick() (B) When putting the old index into the delayed free list, use the old writer_index_offset instead of the current writer_index_offset --H5Fvfd_swmr.c: vfd_swmr_enlarge_shadow_index() (C) When there is error form calling H5F_vfd_swmr_process_eot_queue() in VFD_SWMR_ENTER(err) and VFD_SWMR_LEAVE(err), should report FAIL instead of "err" --H5private.h: VFD_SWMR_ENTER and VFD_SWMR_LEAVE macros (D) Add tests to verify issue #2 and issue #4 are fixed. --- src/H5C.c | 15 +++++- src/H5Fvfd_swmr.c | 41 +++++++++++++-- src/H5private.h | 6 ++- test/testvfdswmr.sh.in | 132 +++++++++++++++++++++++++++++++++++++++++++++++-- 4 files changed, 184 insertions(+), 10 deletions(-) diff --git a/src/H5C.c b/src/H5C.c index 8e72767..802b4e3 100644 --- a/src/H5C.c +++ b/src/H5C.c @@ -2801,8 +2801,21 @@ H5C_protect(H5F_t *f, const H5C_class_t *type, haddr_t addr, void *udata, unsign #ifdef H5_HAVE_PARALLEL coll_access, #endif /* H5_HAVE_PARALLEL */ - type, addr, udata))) + type, addr, udata))) { + /* Print out meaningful message for VFD SWMR reader */ + if(f->shared->vfd_swmr && !f->shared->vfd_swmr_writer) { + uint64_t tmp_tick_num = 0; + + if (H5FD_vfd_swmr_get_tick_and_idx(f->shared->lf, TRUE, &tmp_tick_num, NULL, NULL) < 0) + HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, NULL, "error in retrieving tick_num from driver"); + + if (tmp_tick_num >= f->shared->tick_num + f->shared->vfd_swmr_config.max_lag) + HDONE_ERROR(H5E_FILE, H5E_SYSTEM, NULL, + "Reader's API time exceeds max_lag ticks, suggest to increase the value of max_lag."); + } + HGOTO_ERROR(H5E_CACHE, H5E_CANTLOAD, NULL, "can't load entry") + } entry_ptr = (H5C_cache_entry_t *)thing; cache_ptr->entries_loaded_counter++; diff --git a/src/H5Fvfd_swmr.c b/src/H5Fvfd_swmr.c index 1a8f127..e25b529 100644 --- a/src/H5Fvfd_swmr.c +++ b/src/H5Fvfd_swmr.c @@ -1136,6 +1136,7 @@ H5F_vfd_swmr_reader_end_of_tick(H5F_t *f, hbool_t entering_api) uint32_t tmp_mdf_idx_len; uint32_t tmp_mdf_idx_entries_used; uint32_t mdf_idx_entries_used; + uint32_t vfd_entries; H5F_shared_t * shared = f->shared; struct { uint64_t pgno; @@ -1157,8 +1158,12 @@ H5F_vfd_swmr_reader_end_of_tick(H5F_t *f, hbool_t entering_api) * * If the tick reported has not increased since the last * call, do nothing and exit. + * + * Also retrieve the current number of entries in the index + * so as to detect the need to allocate more space for the + * index. */ - if (H5FD_vfd_swmr_get_tick_and_idx(file, TRUE, &tmp_tick_num, NULL, NULL) < 0) + if (H5FD_vfd_swmr_get_tick_and_idx(file, TRUE, &tmp_tick_num, &vfd_entries, NULL) < 0) HGOTO_ERROR(H5E_ARGS, H5E_CANTGET, FAIL, "error in retrieving tick_num from driver") @@ -1172,7 +1177,7 @@ H5F_vfd_swmr_reader_end_of_tick(H5F_t *f, hbool_t entering_api) * */ if (!entering_api && tmp_tick_num >= shared->tick_num + shared->vfd_swmr_config.max_lag) { HGOTO_ERROR(H5E_FILE, H5E_SYSTEM, FAIL, - "Reader's API time exceeds max_lag of ticks, may increase the value of max_lag."); + "Reader's API time exceeds max_lag ticks, suggest to increase the value of max_lag."); } #if 0 /* Kent */ /* The original code */ @@ -1207,6 +1212,33 @@ H5F_vfd_swmr_reader_end_of_tick(H5F_t *f, hbool_t entering_api) if (shared->mdf_idx == NULL && H5F__vfd_swmr_create_index(shared) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, FAIL, "unable to allocate metadata file index"); + /* Check if more space is needed for the index */ + if (shared->mdf_idx_len < vfd_entries) { + uint32_t inc_mdf_idx_len; + H5FD_vfd_swmr_idx_entry_t *new_idx; + H5FD_vfd_swmr_idx_entry_t *old_idx; + + HDassert(shared->old_mdf_idx_len <= shared->mdf_idx_len); + + /* Determine the size needed for the index */ + inc_mdf_idx_len = shared->mdf_idx_len * 2; + while (vfd_entries > inc_mdf_idx_len) + inc_mdf_idx_len *= 2; + + /* Allocate more space for shared->mdf_idx and shared->old_mdf_idx */ + new_idx = H5MM_realloc(shared->mdf_idx, inc_mdf_idx_len * sizeof(shared->mdf_idx[0])); + if(new_idx == NULL) + HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, FAIL, "new index null after H5MM_realloc()") + shared->mdf_idx = new_idx; + shared->mdf_idx_len = inc_mdf_idx_len; + + old_idx = H5MM_realloc(shared->old_mdf_idx, inc_mdf_idx_len * sizeof(shared->old_mdf_idx[0])); + if(old_idx == NULL) + HGOTO_ERROR(H5E_FILE, H5E_CANTALLOC, FAIL, "old index null after H5MM_realloc()") + shared->old_mdf_idx = old_idx; + shared->old_mdf_idx_len = inc_mdf_idx_len; + } + mdf_idx_entries_used = shared->mdf_idx_len; #if 0 /* JRM */ @@ -1887,6 +1919,7 @@ vfd_swmr_enlarge_shadow_index(H5F_t *f) H5F_shared_t * shared = f->shared; H5FD_vfd_swmr_idx_entry_t *ret_value = NULL; haddr_t idx_addr; + haddr_t old_writer_index_offset; hsize_t idx_size; H5FD_vfd_swmr_idx_entry_t *new_mdf_idx = NULL, *old_mdf_idx; uint32_t new_mdf_idx_len, old_mdf_idx_len; @@ -1924,6 +1957,7 @@ vfd_swmr_enlarge_shadow_index(H5F_t *f) */ H5MM_memcpy(new_mdf_idx, old_mdf_idx, sizeof(new_mdf_idx[0]) * old_mdf_idx_len); + old_writer_index_offset = shared->writer_index_offset; shared->writer_index_offset = idx_addr; ret_value = shared->mdf_idx = new_mdf_idx; shared->mdf_idx_len = new_mdf_idx_len; @@ -1939,7 +1973,8 @@ vfd_swmr_enlarge_shadow_index(H5F_t *f) * past what is strictly necessary, but it seems like a reasonable * trade-off for simplicity. */ - if (shadow_range_defer_free(shared, shared->writer_index_offset, H5FD_MD_INDEX_SIZE(old_mdf_idx_len)) == + /* Fix: use the saved old_writer_index_offset not the current one */ + if (shadow_range_defer_free(shared, old_writer_index_offset, H5FD_MD_INDEX_SIZE(old_mdf_idx_len)) == -1) { HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "could not schedule index reclamation"); } diff --git a/src/H5private.h b/src/H5private.h index 761ad17..58a4100 100644 --- a/src/H5private.h +++ b/src/H5private.h @@ -2145,7 +2145,8 @@ H5_DLL herr_t H5CX_pop(hbool_t update_dxpl_props); else if (TAILQ_EMPTY(&eot_queue_g)) \ ; /* Nothing to do. */ \ else if (H5F_vfd_swmr_process_eot_queue(true) < 0) { \ - HGOTO_ERROR(H5E_FUNC, H5E_CANTSET, err, "error processing EOT queue") \ + /* Report error instead of "err" */ \ + HGOTO_ERROR(H5E_FUNC, H5E_CANTSET, FALSE, "error processing EOT queue") \ } \ } while (0) @@ -2160,7 +2161,8 @@ H5_DLL herr_t H5CX_pop(hbool_t update_dxpl_props); else if (TAILQ_EMPTY(&eot_queue_g)) \ ; /* Nothing to do. */ \ else if (H5F_vfd_swmr_process_eot_queue(false) < 0) { \ - HDONE_ERROR(H5E_FUNC, H5E_CANTSET, err, "error processing EOT queue") \ + /* Report error instead of "err" */ \ + HDONE_ERROR(H5E_FUNC, H5E_CANTSET, FALSE, "error processing EOT queue") \ } \ } while (0) diff --git a/test/testvfdswmr.sh.in b/test/testvfdswmr.sh.in index 955fbb6..176e1e5 100644 --- a/test/testvfdswmr.sh.in +++ b/test/testvfdswmr.sh.in @@ -149,12 +149,16 @@ if [ $rc -ne 0 ] ; then fi all_tests="generator expand shrink expand_shrink sparse vlstr_null vlstr_oob zoo" -all_tests="${all_tests} groups groups_attrs groups_ops few_big many_small attrdset" +all_tests="${all_tests} groups groups_attrs groups_ops few_big many_small" -# For exhaustive run, add: os_groups_attrs, os_groups_ops, os_groups_seg, dsetops, dsetchks,independ_wr +# For exhaustive run, add: +# attrdset, dsetops, dsetchks, +# os_groups_attrs, os_groups_ops, os_groups_seg, independ_wr, +# gfail_entry_length, gfail_checksum, gfail_page_size, gfail_index_space if [[ "$HDF5TestExpress" -eq 0 ]] ; then # exhaustive run - all_tests="${all_tests} os_groups_attrs os_groups_ops os_groups_seg dsetops dsetchks independ_wr" - all_tests="${all_tests} gfail_entry_length gfail_page_size" + all_tests="${all_tests} attrdset dsetops dsetchks" + all_tests="${all_tests} os_groups_attrs os_groups_ops os_groups_seg independ_wr" + all_tests="${all_tests} gfail_entry_length gfail_checksum gfail_page_size gfail_index_space" fi tests=${all_tests} @@ -1453,6 +1457,70 @@ fi ############################################################################### # +# "gfail_checksum" test +# +# Only for exhaustive run +# +# Verify that meaningful message about increasing max_lag is printed when +# incorrect metadata checksum error is enountered when loading the cache entry. +# +# Note that there will be messages from the error stack printed out for this test. +# This is expected. +# +# (See issue #2 in Kent's documentation "Designed to Fail Tests and Issues". +# +############################################################################### +# +# +if [ ${do_gfail_checksum:-no} = yes ]; then + # + # Clean up any existing fifo files from previous runs + if [ -e ./$GFAIL_FIFO_WRITER_TO_READER ]; then # If writer fifo file is found + rm -f ./$GFAIL_FIFO_WRITER_TO_READER + fi + if [ -e ./$GFAIL_FIFO_READER_TO_WRITER ]; then # If reader fifo file is found + rm -f ./$GFAIL_FIFO_READER_TO_WRITER + fi + # + echo launch vfd_swmr_gfail_writer -q -n 420000 ......may take some time...... + catch_out_err_and_rc vfd_swmr_gfail_checksum_writer \ + ../vfd_swmr_gfail_writer -q -m 50 -t 10 -n 4000000 & + pid_writer=$! + + echo launch vfd_swmr_gfail_reader -n 420000 ......may take some time...... + catch_out_err_and_rc vfd_swmr_gfail_checksum_reader \ + ../vfd_swmr_gfail_reader -q -m 50 -t 10 -n 4000000 & + pid_reader=$! + + # Wait for the reader to finish before signaling the + # writer to quit: the writer holds the file open so that the + # reader will find the shadow file when it opens + # the .h5 file. + wait $pid_reader + wait $pid_writer + + # Collect exit code of the reader + if [ $(cat vfd_swmr_gfail_checksum_reader.rc) -ne 0 ]; then + grep "suggest to increase the value of max_lag" vfd_swmr_gfail_checksum_reader.out >/dev/null 2>&1 + if test $? -ne 0; then + echo reader had error + nerrors=$((nerrors + 1)) + fi + fi + + # Collect exit code of the writer + if [ $(cat vfd_swmr_gfail_checksum_writer.rc) -ne 0 ]; then + echo writer had error + nerrors=$((nerrors + 1)) + fi + + # Clean up output files + rm -f vfd_swmr_gfail_checksum_writer.{out,rc} + rm -f vfd_swmr_gfail_checksum_reader.*.{out,rc} +fi + +############################################################################### +# # "gfail_page_size" test # # Only for exhaustive run @@ -1508,6 +1576,62 @@ if [ ${do_gfail_page_size:-no} = yes ]; then fi ############################################################################### +# +# "gfail_index_space" test +# +# Only for exhaustive run +# +# Verify that the failure is fixed when there is not enough space to copy the index. +# (See issue #4 in Kent's documentation "Designed to Fail Tests and Issues". +# +############################################################################### +# +# +if [ ${do_gfail_index_space:-no} = yes ]; then + # + # Clean up any existing fifo files from previous runs + if [ -e ./$GFAIL_FIFO_WRITER_TO_READER ]; then # If writer fifo file is found + rm -f ./$GFAIL_FIFO_WRITER_TO_READER + fi + if [ -e ./$GFAIL_FIFO_READER_TO_WRITER ]; then # If reader fifo file is found + rm -f ./$GFAIL_FIFO_READER_TO_WRITER + fi + # + echo launch vfd_swmr_gfail_writer -q -m 50 -t 10 -n 1000000 ......may take some time...... + catch_out_err_and_rc vfd_swmr_gfail_index_space_writer \ + ../vfd_swmr_gfail_writer -q -m 50 -t 10 -n 1000000 & + pid_writer=$! + + echo launch vfd_swmr_gfail_reader -m 50 -t 10 -n 1000000 ......may take some time...... + catch_out_err_and_rc vfd_swmr_gfail_index_space_reader \ + ../vfd_swmr_gfail_reader -m 50 -t 10 -n 1000000 & + pid_reader=$! + + # Wait for the reader to finish before signaling the + # writer to quit: the writer holds the file open so that the + # reader will find the shadow file when it opens + # the .h5 file. + wait $pid_reader + wait $pid_writer + + # Collect exit code of the reader + if [ $(cat vfd_swmr_gfail_index_space_reader.rc) -ne 0 ]; then + echo reader had error + nerrors=$((nerrors + 1)) + fi + + # Collect exit code of the writer + if [ $(cat vfd_swmr_gfail_index_space_writer.rc) -ne 0 ]; then + echo writer had error + nerrors=$((nerrors + 1)) + fi + + # Clean up output files + rm -f vfd_swmr_gfail_index_space_writer.{out,rc} + rm -f vfd_swmr_gfail_index_space_reader.*.{out,rc} +fi + +############################################################################### ## Report and exit ############################################################################### cd .. -- cgit v0.12