From 63197e99f80b4c6d2aaf76f2d23c460ade1a5f5f Mon Sep 17 00:00:00 2001 From: Dana Robinson <43805+derobins@users.noreply.github.com> Date: Sun, 24 Apr 2022 23:20:52 -0700 Subject: Onion VFD: Sync with develop (#1685) * Removes unused definitions from module headers (#1624) * Fix these Doxygen warnings #1581 (#1589) * Fixes a typo in H5.c (#1639) * free MPI_Group/MPI_Comm/MPI_Datatype objects (#1638) * free MPI_Group/MPI_Comm/MPI_Datatype objects * fix clang-format style * Adds build and license shields to README.md (#1641) * First stab at a Github status bar * Adds a .tokeignore file for counting lines of code accurately * Yanks lines of code calculation since it wildly overcounts * not depend on doIO to free an MPI_Comm object (#1642) * free MPI datatypes previously created (#1637) * Retrieve MPI-IO hints used by MPI library after file open (#1636) H5Pget_fapl_mpio() should return an MPI info object containing all the MPI-IO hints used by the MPI library underneath, after the file is opened. Some hints, such as cb_nodes (number of I/O aggregators), are useful for HDF5 applications and I/O libraries built on top of HDF5. * OESS-168: Remove clang warnings. (#1309) * OESS-168: Remove clang warnings. * OESS-168: Address @lrknox review. * OESS-168: Remove clang warnings. (#1376) * Remove H5_NO_ALIGNMENT_RESTRICTIONS (#1426) * Do not conditionally compile code that uses a pointer dereference and assignment to copy a potentially unaligned variable to aligned automatic storage, or vice versa. Instead, always use naked `memcpy(3)`s. Disassembling the generated code reveals that the `memcpy(3)`s optimize (`-O3`) to a single `mov` instruction for x86_64, which is not strict about alignment. This change reduces the size of code and scripts by 143 lines, eases our way to cross-compilation, and avoids invoking undefined behavior. * Committing clang-format changes * Per discussion, use HD and add comments. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Cleans up some HL library code that inappropriately returns htri_t values cast to herr_t (#1651) * Cleans up some HL library code that inappropriately returns htri_t values cast to herr_t * Committing clang-format changes * Formatted source Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Mirror vfd test fixes (#1629) * Use the FAPL that was created earlier in the test (and delete an unused variable). This allows 'make check-vfd' to pass with --enable-mirror-vfd. * Check for testing directory before creating, to avoid warning from bash. Clean out .libs directory before re-using it (after a failed test), to remove any files generated by libtool. * Committing clang-format changes * Increment error count on failed file open and skip tests for VFDs that need modified filenames. * Skip the mirror VFD for 'make check-vfd' - the mirror VFD requires networking configuration parameters and can't be provided for an automated test that is configured with an environment variable. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes HDF Group paths, adds shellcheck fixes (#1656) For more information: https://www.shellcheck.net/wiki/SC2086 -- Double quote to prevent globbing ... https://www.shellcheck.net/wiki/SC2230 -- which is non-standard. Use builti... https://www.shellcheck.net/wiki/SC2006 -- Use $(...) notation instead of le... * HDFFV-11306 Fixed (#1657) * HDFFV-11306, * Fixed it so both h5open_f and h5close_f can be called multiple times. * Fixed an issue with open objects remaining after h5close_f was called. * Added additional tests. * comments clean-up * Develop clang format java (#1653) * added HDFFV-11306 entry (#1662) * Adds the -q flag to all swmr test programs, quieting noisy output (#1665) * Adds paths-ignore to the Github pull request workflow (#1663) * Changes Github action `hdf5 dev CI` to `PR hdf5 dev CI` (#1666) So the PR action name is not the same as the one in main.yml * Replace H5detect's build-time detection of C99 integer properties with a (#1400) * Replace H5detect's build-time detection of C99 integer properties with a table-driven routine, `H5T__init_native_int()`, that is run at library initialization time. * Improve handling of copying of dynamic libraries and clean them up after (#1681) test finishes. Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com> Co-authored-by: Wei-keng Liao Co-authored-by: H. Joe Lee Co-authored-by: David Young Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Quincey Koziol Co-authored-by: Scot Breitenfeld --- .clang-format | 32 +- .github/workflows/clang-format-check.yml | 4 +- .github/workflows/clang-format-fix.yml | 4 +- .github/workflows/pr-check.yml | 11 +- README.md | 3 + autogen.sh | 136 +- bin/format_source | 2 +- bin/format_source_patch | 2 +- config/cmake/ConfigureChecks.cmake | 4 - config/cmake/ConversionTests.c | 53 - config/cmake/H5pubconf.h.in | 3 - config/conclude.am | 4 +- configure.ac | 19 - fortran/src/H5_f.c | 12 +- fortran/src/H5_ff.F90 | 11 + fortran/test/fortranlib_test.F90 | 20 +- fortran/test/tH5A.F90 | 2 +- fortran/test/tH5A_1_8.F90 | 12 +- fortran/test/tH5F.F90 | 99 +- fortran/test/tH5G_1_8.F90 | 2 +- fortran/test/tHDF5.F90 | 2 +- fortran/test/tHDF5_F03.F90 | 2 +- hl/src/H5DS.c | 172 +- hl/src/H5IM.c | 56 +- hl/src/H5LT.c | 81 +- hl/src/H5LTprivate.h | 17 +- hl/src/H5TB.c | 14 +- java/examples/datasets/CMakeLists.txt | 7 + java/examples/datasets/H5Ex_D_Alloc.java | 66 +- java/examples/datasets/H5Ex_D_Checksum.java | 100 +- java/examples/datasets/H5Ex_D_Chunk.java | 101 +- java/examples/datasets/H5Ex_D_Compact.java | 66 +- java/examples/datasets/H5Ex_D_External.java | 51 +- java/examples/datasets/H5Ex_D_FillValue.java | 73 +- java/examples/datasets/H5Ex_D_Gzip.java | 105 +- java/examples/datasets/H5Ex_D_Hyperslab.java | 70 +- java/examples/datasets/H5Ex_D_Nbit.java | 113 +- java/examples/datasets/H5Ex_D_ReadWrite.java | 41 +- java/examples/datasets/H5Ex_D_Shuffle.java | 112 +- java/examples/datasets/H5Ex_D_Sofloat.java | 114 +- java/examples/datasets/H5Ex_D_Soint.java | 110 +- java/examples/datasets/H5Ex_D_Szip.java | 107 +- java/examples/datasets/H5Ex_D_Transform.java | 55 +- java/examples/datasets/H5Ex_D_UnlimitedAdd.java | 85 +- java/examples/datasets/H5Ex_D_UnlimitedGzip.java | 138 +- java/examples/datasets/H5Ex_D_UnlimitedMod.java | 81 +- java/examples/datasets/JavaDatasetExample.sh.in | 16 +- java/examples/datatypes/CMakeLists.txt | 7 + java/examples/datatypes/H5Ex_T_Array.java | 63 +- java/examples/datatypes/H5Ex_T_ArrayAttribute.java | 67 +- java/examples/datatypes/H5Ex_T_Bit.java | 51 +- java/examples/datatypes/H5Ex_T_BitAttribute.java | 52 +- java/examples/datatypes/H5Ex_T_Commit.java | 100 +- java/examples/datatypes/H5Ex_T_Compound.java | 152 +- .../datatypes/H5Ex_T_CompoundAttribute.java | 154 +- java/examples/datatypes/H5Ex_T_Float.java | 51 +- java/examples/datatypes/H5Ex_T_FloatAttribute.java | 54 +- java/examples/datatypes/H5Ex_T_Integer.java | 47 +- .../datatypes/H5Ex_T_IntegerAttribute.java | 48 +- .../examples/datatypes/H5Ex_T_ObjectReference.java | 144 +- .../datatypes/H5Ex_T_ObjectReferenceAttribute.java | 160 +- java/examples/datatypes/H5Ex_T_Opaque.java | 59 +- .../examples/datatypes/H5Ex_T_OpaqueAttribute.java | 59 +- java/examples/datatypes/H5Ex_T_String.java | 71 +- .../examples/datatypes/H5Ex_T_StringAttribute.java | 73 +- java/examples/datatypes/H5Ex_T_VLString.java | 50 +- java/examples/datatypes/JavaDatatypeExample.sh.in | 16 +- java/examples/groups/CMakeLists.txt | 7 + java/examples/groups/H5Ex_G_Compact.java | 52 +- java/examples/groups/H5Ex_G_Corder.java | 56 +- java/examples/groups/H5Ex_G_Create.java | 19 +- java/examples/groups/H5Ex_G_Intermediate.java | 42 +- java/examples/groups/H5Ex_G_Iterate.java | 52 +- java/examples/groups/H5Ex_G_Phase.java | 73 +- java/examples/groups/H5Ex_G_Traverse.java | 45 +- java/examples/groups/H5Ex_G_Visit.java | 53 +- java/examples/groups/JavaGroupExample.sh.in | 16 +- java/examples/intro/CMakeLists.txt | 7 + java/examples/intro/H5_CreateAttribute.java | 38 +- java/examples/intro/H5_CreateDataset.java | 28 +- java/examples/intro/H5_CreateFile.java | 11 +- java/examples/intro/H5_CreateGroup.java | 19 +- .../intro/H5_CreateGroupAbsoluteRelative.java | 27 +- java/examples/intro/H5_CreateGroupDataset.java | 68 +- java/examples/intro/H5_ReadWrite.java | 35 +- java/examples/intro/JavaIntroExample.sh.in | 16 +- java/src/hdf/hdf5lib/CMakeLists.txt | 3 + java/src/hdf/hdf5lib/H5.java | 5633 +++++++++++--------- java/src/hdf/hdf5lib/HDF5Constants.java | 84 +- java/src/hdf/hdf5lib/HDF5GroupInfo.java | 116 +- java/src/hdf/hdf5lib/HDFArray.java | 467 +- java/src/hdf/hdf5lib/HDFNativeData.java | 95 +- java/src/hdf/hdf5lib/callbacks/Callbacks.java | 4 +- java/src/hdf/hdf5lib/callbacks/H5A_iterate_t.java | 7 +- java/src/hdf/hdf5lib/callbacks/H5D_append_t.java | 7 +- java/src/hdf/hdf5lib/callbacks/H5D_iterate_t.java | 7 +- java/src/hdf/hdf5lib/callbacks/H5E_walk_t.java | 7 +- .../hdf5lib/callbacks/H5L_iterate_opdata_t.java | 1 - .../hdf5lib/callbacks/H5O_iterate_opdata_t.java | 1 - .../hdf5lib/callbacks/H5P_cls_close_func_t.java | 7 +- .../hdf/hdf5lib/callbacks/H5P_cls_copy_func_t.java | 7 +- .../hdf5lib/callbacks/H5P_cls_create_func_t.java | 7 +- java/src/hdf/hdf5lib/callbacks/H5P_iterate_t.java | 7 +- java/src/hdf/hdf5lib/callbacks/package-info.java | 3 +- .../hdf5lib/exceptions/HDF5AttributeException.java | 8 +- .../hdf/hdf5lib/exceptions/HDF5BtreeException.java | 8 +- .../exceptions/HDF5DataFiltersException.java | 8 +- .../exceptions/HDF5DataStorageException.java | 8 +- .../exceptions/HDF5DatasetInterfaceException.java | 8 +- .../HDF5DataspaceInterfaceException.java | 8 +- .../exceptions/HDF5DatatypeInterfaceException.java | 8 +- java/src/hdf/hdf5lib/exceptions/HDF5Exception.java | 10 +- .../exceptions/HDF5ExternalFileListException.java | 8 +- .../exceptions/HDF5FileInterfaceException.java | 8 +- .../exceptions/HDF5FunctionArgumentException.java | 8 +- .../exceptions/HDF5FunctionEntryExitException.java | 8 +- .../hdf/hdf5lib/exceptions/HDF5HeapException.java | 8 +- .../hdf/hdf5lib/exceptions/HDF5IdException.java | 9 +- .../exceptions/HDF5InternalErrorException.java | 8 +- .../hdf/hdf5lib/exceptions/HDF5JavaException.java | 8 +- .../hdf5lib/exceptions/HDF5LibraryException.java | 35 +- .../exceptions/HDF5LowLevelIOException.java | 8 +- .../exceptions/HDF5MetaDataCacheException.java | 8 +- .../exceptions/HDF5ObjectHeaderException.java | 8 +- .../HDF5PropertyListInterfaceException.java | 8 +- .../hdf5lib/exceptions/HDF5ReferenceException.java | 8 +- .../HDF5ResourceUnavailableException.java | 8 +- .../exceptions/HDF5SymbolTableException.java | 8 +- java/src/hdf/hdf5lib/package-info.java | 99 +- .../hdf/hdf5lib/structs/H5AC_cache_config_t.java | 144 +- java/src/hdf/hdf5lib/structs/H5A_info_t.java | 11 +- java/src/hdf/hdf5lib/structs/H5E_error2_t.java | 24 +- java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java | 48 +- java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java | 35 +- java/src/hdf/hdf5lib/structs/H5F_info2_t.java | 36 +- java/src/hdf/hdf5lib/structs/H5G_info_t.java | 2 +- java/src/hdf/hdf5lib/structs/H5L_info_t.java | 36 +- java/src/hdf/hdf5lib/structs/H5O_hdr_info_t.java | 28 +- java/src/hdf/hdf5lib/structs/H5O_info_t.java | 39 +- .../src/hdf/hdf5lib/structs/H5O_native_info_t.java | 19 +- java/src/hdf/hdf5lib/structs/H5O_token_t.java | 13 +- java/src/hdf/hdf5lib/structs/H5_ih_info_t.java | 13 +- java/src/hdf/hdf5lib/structs/package-info.java | 3 +- java/test/CMakeLists.txt | 7 + java/test/TestAll.java | 26 +- java/test/TestH5.java | 397 +- java/test/TestH5A.java | 1028 ++-- java/test/TestH5Arw.java | 169 +- java/test/TestH5D.java | 555 +- java/test/TestH5Dparams.java | 69 +- java/test/TestH5Dplist.java | 268 +- java/test/TestH5Drw.java | 161 +- java/test/TestH5E.java | 125 +- java/test/TestH5Edefault.java | 161 +- java/test/TestH5Eparams.java | 71 +- java/test/TestH5Eregister.java | 27 +- java/test/TestH5F.java | 173 +- java/test/TestH5Fbasic.java | 110 +- java/test/TestH5Fparams.java | 112 +- java/test/TestH5Fswmr.java | 49 +- java/test/TestH5G.java | 317 +- java/test/TestH5Gbasic.java | 311 +- java/test/TestH5Giterate.java | 71 +- java/test/TestH5Lbasic.java | 234 +- java/test/TestH5Lcreate.java | 550 +- java/test/TestH5Lparams.java | 129 +- java/test/TestH5Obasic.java | 480 +- java/test/TestH5Ocopy.java | 352 +- java/test/TestH5OcopyOld.java | 391 +- java/test/TestH5Ocreate.java | 329 +- java/test/TestH5Oparams.java | 111 +- java/test/TestH5P.java | 694 ++- java/test/TestH5PData.java | 151 +- java/test/TestH5PL.java | 142 +- java/test/TestH5Pfapl.java | 790 +-- java/test/TestH5Pfaplhdfs.java | 64 +- java/test/TestH5Pfapls3.java | 67 +- java/test/TestH5Plist.java | 752 +-- java/test/TestH5Pvirtual.java | 364 +- java/test/TestH5R.java | 414 +- java/test/TestH5Rref.java | 797 +-- java/test/TestH5S.java | 313 +- java/test/TestH5Sbasic.java | 279 +- java/test/TestH5T.java | 429 +- java/test/TestH5Tbasic.java | 99 +- java/test/TestH5Tparams.java | 231 +- java/test/TestH5VL.java | 70 +- java/test/TestH5Z.java | 58 +- java/test/junit.sh.in | 13 +- release_docs/RELEASE.txt | 7 +- src/H5.c | 2 +- src/H5ACmodule.h | 5 +- src/H5Amodule.h | 5 +- src/H5B2module.h | 5 +- src/H5Bmodule.h | 5 +- src/H5CXmodule.h | 5 +- src/H5Cmodule.h | 5 +- src/H5Dmodule.h | 5 +- src/H5EAmodule.h | 5 +- src/H5ESmodule.h | 5 +- src/H5Emodule.h | 5 +- src/H5FAmodule.h | 5 +- src/H5FDdrvr_module.h | 6 +- src/H5FDmodule.h | 5 +- src/H5FDmpio.c | 49 + src/H5FDros3.c | 4 +- src/H5FDros3.h | 2 +- src/H5FLmodule.h | 5 +- src/H5FSmodule.h | 5 +- src/H5Fmodule.h | 5 +- src/H5Gmodule.h | 5 +- src/H5HFmodule.h | 5 +- src/H5HGmodule.h | 5 +- src/H5HLmodule.h | 5 +- src/H5HLpkg.h | 5 +- src/H5Imodule.h | 5 +- src/H5Lmodule.h | 5 +- src/H5MFmodule.h | 5 +- src/H5Mmodule.h | 5 +- src/H5Omodule.h | 5 +- src/H5Opublic.h | 4 - src/H5PBmodule.h | 5 +- src/H5PLmodule.h | 5 +- src/H5Pmodule.h | 5 +- src/H5RSmodule.h | 5 +- src/H5Rmodule.h | 5 +- src/H5SLmodule.h | 5 +- src/H5SMmodule.h | 5 +- src/H5Smodule.h | 5 +- src/H5T.c | 43 +- src/H5Tmodule.h | 16 +- src/H5Tnative.c | 351 +- src/H5Tpkg.h | 35 +- src/H5Tpublic.h | 6 +- src/H5Tvlen.c | 94 +- src/H5VLmodule.h | 5 +- src/H5Zmodule.h | 5 +- src/H5detect.c | 687 +-- src/H5module.h | 5 +- test/cross_read.c | 12 +- test/mirror_vfd.c | 21 +- test/test_mirror.sh.in | 8 +- test/test_swmr.sh.in | 30 +- testpar/t_cache.c | 19 +- testpar/t_mpi.c | 38 +- testpar/t_prop.c | 14 +- tools/lib/h5tools.c | 3 +- 247 files changed, 14414 insertions(+), 11494 deletions(-) diff --git a/.clang-format b/.clang-format index 62dc6b5..b51da2a 100644 --- a/.clang-format +++ b/.clang-format @@ -1,7 +1,20 @@ --- -Language: Cpp BasedOnStyle: LLVM AlignConsecutiveAssignments: true +BraceWrapping: + AfterFunction: true + #llvm10-11: AfterControlStatement: false - Never + BeforeCatch: true + BeforeElse: true + #llvm11: BeforeLambdaBody: false + #llvm11: BeforeWhile: false +BreakBeforeBraces: Stroustrup +BreakAfterJavaFieldAnnotations: true +BreakStringLiterals: true +ColumnLimit: 110 # Update $max_trace_macro_line_len in bin/trace also +IndentWidth: 4 +--- +Language: Cpp #llvm11: AlignConsecutiveBitFields: false AlignConsecutiveDeclarations: true AlignConsecutiveMacros: true @@ -22,17 +35,6 @@ AlwaysBreakAfterReturnType: AllDefinitions # - H5_ATTR_CONST # - H5_ATTR_PURE # - H5_ATTR_FALLTHROUGH -BraceWrapping: - AfterFunction: true - #llvm10-11: AfterControlStatement: false - Never - BeforeCatch: true - BeforeElse: true - #llvm11: BeforeLambdaBody: false - #llvm11: BeforeWhile: false -BreakBeforeBraces: Stroustrup -BreakAfterJavaFieldAnnotations: true -BreakStringLiterals: true -ColumnLimit: 110 # Update $max_trace_macro_line_len in bin/trace also ForEachMacros: ['ALL_MEMBERS', 'UNIQUE_MEMBERS'] IncludeCategories: - Regex: '^"(llvm|llvm-c|clang|clang-c)/' @@ -55,7 +57,6 @@ IndentCaseLabels: true #llvm11: IndentCaseBlocks: false IndentGotoLabels: false #llvm11: IndentExternBlock: AfterExternBlock -IndentWidth: 4 #llvm11: InsertTrailingCommas: None MacroBlockBegin: "^BEGIN_FUNC" MacroBlockEnd: "^END_FUNC" @@ -92,5 +93,8 @@ StatementMacros: #llvm11: WhitespaceSensitiveMacros: #llvm11: - STRINGIZE #llvm11: - PP_STRINGIZE +--- +Language: Java +BreakAfterJavaFieldAnnotations: true +JavaImportGroups: ['java', 'hdf', 'hdf.hdf5lib', 'org'] ... - diff --git a/.github/workflows/clang-format-check.yml b/.github/workflows/clang-format-check.yml index 4f696e7..0343f4b 100644 --- a/.github/workflows/clang-format-check.yml +++ b/.github/workflows/clang-format-check.yml @@ -8,11 +8,11 @@ jobs: if: "!contains(github.event.head_commit.message, 'skip-ci')" steps: - uses: actions/checkout@v2 - - name: Run clang-format style check for C programs. + - name: Run clang-format style check for C and java programs. uses: DoozyX/clang-format-lint-action@v0.11 with: source: '.' - extensions: 'c,h,cpp,hpp' + extensions: 'c,h,cpp,hpp,java' clangFormatVersion: 10 style: file exclude: './config ./hl/src/H5LTanalyze.c ./hl/src/H5LTparse.c ./hl/src/H5LTparse.h ./src/H5Epubgen.h ./src/H5Einit.h ./src/H5Eterm.h ./src/H5Edefin.h ./src/H5version.h ./src/H5overflow.h' diff --git a/.github/workflows/clang-format-fix.yml b/.github/workflows/clang-format-fix.yml index 082d617..abdd069 100644 --- a/.github/workflows/clang-format-fix.yml +++ b/.github/workflows/clang-format-fix.yml @@ -9,11 +9,11 @@ jobs: if: "!contains(github.event.head_commit.message, 'skip-ci')" steps: - uses: actions/checkout@v2 - - name: Run clang-format style check for C programs. + - name: Run clang-format style check for C and Java programs. uses: DoozyX/clang-format-lint-action@v0.11 with: source: '.' - extensions: 'c,h,cpp,hpp' + extensions: 'c,h,cpp,hpp,java' clangFormatVersion: 10 inplace: True style: file diff --git a/.github/workflows/pr-check.yml b/.github/workflows/pr-check.yml index 65bf42b..5dd923f 100644 --- a/.github/workflows/pr-check.yml +++ b/.github/workflows/pr-check.yml @@ -1,10 +1,17 @@ -name: hdf5 dev CI +name: PR hdf5 dev CI # Controls when the action will run. Triggers the workflow on push or pull request on: pull_request: branches: [ develop, hdf5_1_12, hdf5_1_10, hdf5_1_8 ] - + paths-ignore: + - '.github/**' + - 'doc/**' + - 'release_docs/**' + - 'ACKNOWLEDGEMENTS' + - 'COPYING**' + - '**.md' + # A workflow run is made up of one or more jobs that can run sequentially or in parallel jobs: # This workflow contains a single job called "build" diff --git a/README.md b/README.md index 8f770ed..1d4e3d6 100644 --- a/README.md +++ b/README.md @@ -2,6 +2,9 @@ HDF5 version 1.13.2-1 currently under development ![HDF5 Logo](doxygen/img/HDF5.png) +[![Build](https://img.shields.io/github/workflow/status/HDFGroup/hdf5/hdf5%20dev%20CI/develop)](https://github.com/HDFGroup/hdf5/actions?query=branch%3Adevelop) +[![BSD](https://img.shields.io/badge/License-BSD-blue.svg)](https://github.com/HDFGroup/hdf5/blob/develop/COPYING) + *Please refer to the release_docs/INSTALL file for installation instructions.* THE HDF GROUP diff --git a/autogen.sh b/autogen.sh index c4fdf36..4676ee0 100755 --- a/autogen.sh +++ b/autogen.sh @@ -50,17 +50,7 @@ # Note that aclocal will attempt to include libtool's share/aclocal # directory. # -# This script takes two potential options: -# -# -p -# -# When this is selected, the autotools versions are set to the paths -# and versions used by The HDF Group to produce the released versions -# of the library. -# -# NOTE: This is probably temporary. Once we update our dev machines -# to have recent versions of the autotools this option will probably -# be removed. +# Aside from -h for help, this script takes one potential option: # # -v # @@ -72,9 +62,6 @@ echo "* HDF5 autogen.sh script *" echo "**************************" echo -# Default is not production -production=false - # Default is not verbose output verbose=false @@ -86,10 +73,6 @@ while getopts "$optspec" optchar; do echo echo " -h Print this help message." echo - echo " -p Used by THG to use hard-codes autotools" - echo " paths on THG machines. Not for non-HDF-Group" - echo " users!" - echo echo " -v Show more verbose output." echo echo " NOTE: Each tool can be set via an environment variable." @@ -97,11 +80,6 @@ while getopts "$optspec" optchar; do echo exit 0 ;; - p) - echo "Setting THG production mode..." - echo - production=true - ;; v) echo "Setting verbosity: high" echo @@ -117,84 +95,52 @@ while getopts "$optspec" optchar; do esac done -if [ "$production" = true ] ; then - - # Production mode - # - # Hard-code canonical HDF Group tool locations. - - # If paths to tools are not specified, assume they are - # located in /usr/hdf/bin/AUTOTOOLS and set paths accordingly. - if test -z ${HDF5_AUTOCONF}; then - HDF5_AUTOCONF=/usr/hdf/bin/AUTOTOOLS/autoconf - fi - if test -z ${HDF5_AUTOMAKE}; then - HDF5_AUTOMAKE=/usr/hdf/bin/AUTOTOOLS/automake - fi - if test -z ${HDF5_AUTOHEADER}; then - HDF5_AUTOHEADER=/usr/hdf/bin/AUTOTOOLS/autoheader - fi - if test -z ${HDF5_ACLOCAL}; then - HDF5_ACLOCAL=/usr/hdf/bin/AUTOTOOLS/aclocal - fi - if test -z ${HDF5_LIBTOOL}; then - HDF5_LIBTOOL=/usr/hdf/bin/AUTOTOOLS/libtool - fi - if test -z ${HDF5_M4}; then - HDF5_M4=/usr/hdf/bin/AUTOTOOLS/m4 - fi - -else - - # Not in production mode - # - # If paths to autotools are not specified, use whatever the system - # has installed as the default. We use 'which ' to - # show exactly what's being used. - if test -z ${HDF5_AUTOCONF}; then - HDF5_AUTOCONF=$(which autoconf) - fi - if test -z ${HDF5_AUTOMAKE}; then - HDF5_AUTOMAKE=$(which automake) - fi - if test -z ${HDF5_AUTOHEADER}; then - HDF5_AUTOHEADER=$(which autoheader) - fi - if test -z ${HDF5_ACLOCAL}; then - HDF5_ACLOCAL=$(which aclocal) - fi - if test -z ${HDF5_LIBTOOL}; then - case "`uname`" in - Darwin*) - # libtool on OS-X is non-gnu - HDF5_LIBTOOL=$(which glibtool) - ;; - *) - HDF5_LIBTOOL=$(which libtool) - ;; - esac - fi - if test -z ${HDF5_M4}; then - HDF5_M4=$(which m4) - fi - -fi # production +# If paths to autotools are not specified, use whatever the system +# has installed as the default. We use 'command -v ' to +# show exactly what's being used (shellcheck complains that 'which' +# is non-standard and deprecated). +if test -z "${HDF5_AUTOCONF}"; then + HDF5_AUTOCONF="$(command -v autoconf)" +fi +if test -z "${HDF5_AUTOMAKE}"; then + HDF5_AUTOMAKE="$(command -v automake)" +fi +if test -z "${HDF5_AUTOHEADER}"; then + HDF5_AUTOHEADER="$(command -v autoheader)" +fi +if test -z "${HDF5_ACLOCAL}"; then + HDF5_ACLOCAL="$(command -v aclocal)" +fi +if test -z "${HDF5_LIBTOOL}"; then + case "$(uname)" in + Darwin*) + # libtool on OS-X is non-gnu + HDF5_LIBTOOL="$(command -v glibtool)" + ;; + *) + HDF5_LIBTOOL="$(command -v libtool)" + ;; + esac +fi +if test -z "${HDF5_M4}"; then + HDF5_M4="$(command -v m4)" +fi # Make sure that these versions of the autotools are in the path -AUTOCONF_DIR=`dirname ${HDF5_AUTOCONF}` -LIBTOOL_DIR=`dirname ${HDF5_LIBTOOL}` -M4_DIR=`dirname ${HDF5_M4}` +AUTOCONF_DIR=$(dirname "${HDF5_AUTOCONF}") +LIBTOOL_DIR=$(dirname "${HDF5_LIBTOOL}") +M4_DIR=$(dirname "${HDF5_M4}") PATH=${AUTOCONF_DIR}:${LIBTOOL_DIR}:${M4_DIR}:$PATH # Make libtoolize match the specified libtool -case "`uname`" in +case "$(uname)" in Darwin*) # On OS X, libtoolize could be named glibtoolize or # libtoolize. Try the former first, then fall back # to the latter if it's not found. HDF5_LIBTOOLIZE="${LIBTOOL_DIR}/glibtoolize" - if [ ! -f $HDF5_LIBTOOLIZE ] ; then + if [ ! -f "$HDF5_LIBTOOLIZE" ] ; then HDF5_LIBTOOLIZE="${LIBTOOL_DIR}/libtoolize" fi ;; @@ -249,7 +195,7 @@ echo # LIBTOOLIZE libtoolize_cmd="${HDF5_LIBTOOLIZE} --copy --force" -echo ${libtoolize_cmd} +echo "${libtoolize_cmd}" if [ "$verbose" = true ] ; then ${HDF5_LIBTOOLIZE} --version fi @@ -264,7 +210,7 @@ if test -e "${LIBTOOL_DIR}/../share/aclocal" ; then aclocal_include="-I ${LIBTOOL_DIR}/../share/aclocal" fi aclocal_cmd="${HDF5_ACLOCAL} --force -I m4 ${aclocal_include}" -echo ${aclocal_cmd} +echo "${aclocal_cmd}" if [ "$verbose" = true ] ; then ${HDF5_ACLOCAL} --version fi @@ -273,7 +219,7 @@ echo # AUTOHEADER autoheader_cmd="${HDF5_AUTOHEADER} --force" -echo ${autoheader_cmd} +echo "${autoheader_cmd}" if [ "$verbose" = true ] ; then ${HDF5_AUTOHEADER} --version fi @@ -282,7 +228,7 @@ echo # AUTOMAKE automake_cmd="${HDF5_AUTOMAKE} --copy --add-missing --force-missing" -echo ${automake_cmd} +echo "${automake_cmd}" if [ "$verbose" = true ] ; then ${HDF5_AUTOMAKE} --version fi @@ -291,7 +237,7 @@ echo # AUTOCONF autoconf_cmd="${HDF5_AUTOCONF} --force" -echo ${autoconf_cmd} +echo "${autoconf_cmd}" if [ "$verbose" = true ] ; then ${HDF5_AUTOCONF} --version fi diff --git a/bin/format_source b/bin/format_source index dce34e5..227d22a 100755 --- a/bin/format_source +++ b/bin/format_source @@ -20,7 +20,7 @@ find . \( -type d -path ./config -prune -and -not -path ./config \) \ -or -name H5version.h \ -or -name H5overflow.h \ \) \) \ - -and \( -iname *.h -or -iname *.c -or -iname *.cpp -or -iname *.hpp \) \) \ + -and \( -iname *.h -or -iname *.c -or -iname *.cpp -or -iname *.hpp -or -iname *.java \) \) \ | xargs clang-format -style=file -i -fallback-style=none exit 0 diff --git a/bin/format_source_patch b/bin/format_source_patch index 439baf2..2e01455 100755 --- a/bin/format_source_patch +++ b/bin/format_source_patch @@ -20,7 +20,7 @@ find . \( -type d -path ./config -prune -and -not -path ./config \) \ -or -name H5version.h \ -or -name H5overflow.h \ \) \) \ - -and \( -iname *.h -or -iname *.c -or -iname *.cpp -or -iname *.hpp \) \) \ + -and \( -iname *.h -or -iname *.c -or -iname *.cpp -or -iname *.hpp -or -iname *.java \) \) \ | xargs clang-format -style=file -i -fallback-style=none git diff > clang_format.patch diff --git a/config/cmake/ConfigureChecks.cmake b/config/cmake/ConfigureChecks.cmake index 43aa243..9c91d34 100644 --- a/config/cmake/ConfigureChecks.cmake +++ b/config/cmake/ConfigureChecks.cmake @@ -416,7 +416,3 @@ H5ConversionTests (${HDF_PREFIX}_LLONG_TO_LDOUBLE_CORRECT "Checking IF correctly # some long double values #----------------------------------------------------------------------------- H5ConversionTests (${HDF_PREFIX}_DISABLE_SOME_LDOUBLE_CONV "Checking IF the cpu is power9 and cannot correctly converting long double values") -# ---------------------------------------------------------------------- -# Check if pointer alignments are enforced -#----------------------------------------------------------------------------- -H5ConversionTests (${HDF_PREFIX}_NO_ALIGNMENT_RESTRICTIONS "Checking IF alignment restrictions are strictly enforced") diff --git a/config/cmake/ConversionTests.c b/config/cmake/ConversionTests.c index f80959f..f100dd8 100644 --- a/config/cmake/ConversionTests.c +++ b/config/cmake/ConversionTests.c @@ -234,59 +234,6 @@ done: } #endif -#ifdef H5_NO_ALIGNMENT_RESTRICTIONS_TEST - -#include -#include - -typedef struct { - size_t len; - void *p; -} hvl_t; - -#ifdef FC_DUMMY_MAIN -#ifndef FC_DUMMY_MAIN_EQ_F77 -# ifdef __cplusplus -extern "C" -# endif -int FC_DUMMY_MAIN() -{ return 1;} -#endif -#endif -int HDF_NO_UBSAN -main () -{ - - char *chp = "beefs"; - char **chpp = malloc (2 * sizeof (char *)); - char **chpp2; - hvl_t vl = { 12345, (void *) chp }; - hvl_t *vlp; - hvl_t *vlp2; - - memcpy ((void *) ((char *) chpp + 1), &chp, sizeof (char *)); - chpp2 = (char **) ((char *) chpp + 1); - if (strcmp (*chpp2, chp)) { - free (chpp); - return 1; - } - free (chpp); - - vlp = malloc (2 * sizeof (hvl_t)); - memcpy ((void *) ((char *) vlp + 1), &vl, sizeof (hvl_t)); - vlp2 = (hvl_t *) ((char *) vlp + 1); - if (vlp2->len != vl.len || vlp2->p != vl.p) { - free (vlp); - return 1; - } - free (vlp); - - ; - return 0; -} - -#endif - #ifdef H5_DISABLE_SOME_LDOUBLE_CONV_TEST #include diff --git a/config/cmake/H5pubconf.h.in b/config/cmake/H5pubconf.h.in index 4956c97..9a581cb 100644 --- a/config/cmake/H5pubconf.h.in +++ b/config/cmake/H5pubconf.h.in @@ -434,9 +434,6 @@ /* Define to enable internal memory allocation sanity checking. */ #cmakedefine H5_MEMORY_ALLOC_SANITY_CHECK @H5_MEMORY_ALLOC_SANITY_CHECK@ -/* Define if we can violate pointer alignment restrictions */ -#cmakedefine H5_NO_ALIGNMENT_RESTRICTIONS @H5_NO_ALIGNMENT_RESTRICTIONS@ - /* Define if deprecated public API symbols are disabled */ #cmakedefine H5_NO_DEPRECATED_SYMBOLS @H5_NO_DEPRECATED_SYMBOLS@ diff --git a/config/conclude.am b/config/conclude.am index e798d8d..bfbe1ec 100644 --- a/config/conclude.am +++ b/config/conclude.am @@ -283,7 +283,9 @@ if BUILD_PARALLEL_CONDITIONAL # VFD_LIST += mpio endif if MIRROR_VFD_CONDITIONAL - VFD_LIST += mirror + # Mirror VFD needs network configuration, etc. and isn't easy to set + # reasonable defaults for that info. + # VFD_LIST += mirror endif if ROS3_VFD_CONDITIONAL VFD_LIST += ros3 diff --git a/configure.ac b/configure.ac index d5cef35..908ece7 100644 --- a/configure.ac +++ b/configure.ac @@ -3990,25 +3990,6 @@ AC_ARG_ENABLE([embedded-libinfo], ## ---------------------------------------------------------------------- -## Check if pointer alignments are enforced -## -AC_MSG_CHECKING([if alignment restrictions are strictly enforced]) - -TEST_SRC="`(echo \"#define H5_NO_ALIGNMENT_RESTRICTIONS_TEST 1\"; cat $srcdir/config/cmake/ConversionTests.c)`" - -AC_RUN_IFELSE([ - AC_LANG_SOURCE([$TEST_SRC]) - ], [ - AC_DEFINE([NO_ALIGNMENT_RESTRICTIONS], [1], [Define if we can violate pointer alignment restrictions]) - AC_MSG_RESULT([no]) - ], [ - AC_MSG_RESULT([yes]) - ], [ - AC_MSG_RESULT([unknown, assuming yes]) - ]) - - -## ---------------------------------------------------------------------- ## Restore user's CFLAGS. CFLAGS="$saved_user_CFLAGS" FCFLAGS="$saved_user_FCFLAGS" diff --git a/fortran/src/H5_f.c b/fortran/src/H5_f.c index 0277e5c..468debe 100644 --- a/fortran/src/H5_f.c +++ b/fortran/src/H5_f.c @@ -65,12 +65,6 @@ h5init_types_c(hid_t_f *types, hid_t_f *floatingtypes, hid_t_f *integertypes) * Find the HDF5 type of the Fortran Integer KIND. */ - /* Initialized INTEGER KIND types to default to native integer */ - for (i = 0; i < 5; i++) { - if ((types[i] = (hid_t_f)H5Tcopy(H5T_NATIVE_INT)) < 0) - return ret_value; - } - for (i = 0; i < H5_FORTRAN_NUM_INTEGER_KINDS; i++) { if (IntKinds_SizeOf[i] == sizeof(char)) { if ((types[i] = (hid_t_f)H5Tcopy(H5T_NATIVE_CHAR)) < 0) @@ -96,6 +90,12 @@ h5init_types_c(hid_t_f *types, hid_t_f *floatingtypes, hid_t_f *integertypes) } /*end else */ } + /* Initialized missing INTEGER KIND types to default to native integer */ + for (i = H5_FORTRAN_NUM_INTEGER_KINDS; i < 5; i++) { + if ((types[i] = (hid_t_f)H5Tcopy(H5T_NATIVE_INT)) < 0) + return ret_value; + } + if (sizeof(int_f) == sizeof(int)) { if ((types[5] = (hid_t_f)H5Tcopy(H5T_NATIVE_INT)) < 0) return ret_value; diff --git a/fortran/src/H5_ff.F90 b/fortran/src/H5_ff.F90 index 350d978..0aa4b04 100644 --- a/fortran/src/H5_ff.F90 +++ b/fortran/src/H5_ff.F90 @@ -250,6 +250,9 @@ CONTAINS END INTERFACE + ! Check if H5open_f has already been called. If so, skip doing it again. + IF(H5OPEN_NUM_OBJ .NE. 0) RETURN + error = h5init_types_c(predef_types, floating_types, integer_types) H5T_NATIVE_INTEGER_KIND(1:5) = predef_types(1:5) @@ -668,6 +671,7 @@ CONTAINS ! October 13, 2011 ! Fortran90 Interface: SUBROUTINE h5close_f(error) + USE H5F, ONLY : h5fget_obj_count_f, H5OPEN_NUM_OBJ IMPLICIT NONE INTEGER, INTENT(OUT) :: error !***** @@ -685,10 +689,17 @@ CONTAINS INTEGER(HID_T), DIMENSION(1:I_TYPES_LEN) :: i_types END FUNCTION h5close_types_c END INTERFACE + + ! Check if h5close_f has already been called. Skip doing it again. + IF(H5OPEN_NUM_OBJ .EQ. 0) RETURN + error = h5close_types_c(predef_types, PREDEF_TYPES_LEN, & floating_types, FLOATING_TYPES_LEN, & integer_types, INTEGER_TYPES_LEN ) + ! Reset the number of open objects from h5open_f to zero + CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), H5F_OBJ_ALL_F, H5OPEN_NUM_OBJ, error) + END SUBROUTINE h5close_f !****s* H5LIB/h5get_libversion_f diff --git a/fortran/test/fortranlib_test.F90 b/fortran/test/fortranlib_test.F90 index 1640a8f..998b481 100644 --- a/fortran/test/fortranlib_test.F90 +++ b/fortran/test/fortranlib_test.F90 @@ -37,19 +37,27 @@ PROGRAM fortranlibtest INTEGER :: ret_total_error LOGICAL :: cleanup, status + WRITE(*,*) ' ========================== ' + WRITE(*,*) ' FORTRAN tests ' + WRITE(*,*) ' ========================== ' + + ret_total_error = 0 + CALL h5openclose(ret_total_error) + CALL write_test_status(ret_total_error, ' h5open/h5close test', total_error) + CALL h5open_f(error) + CALL check("h5open_f",error,total_error) cleanup = .TRUE. CALL h5_env_nocleanup_f(status) IF(status) cleanup=.FALSE. - WRITE(*,*) ' ========================== ' - WRITE(*,*) ' FORTRAN tests ' - WRITE(*,*) ' ========================== ' - CALL h5get_libversion_f(majnum, minnum, relnum, total_error) - IF(total_error .EQ. 0) THEN - WRITE(*, '(" FORTRANLIB_TEST is linked with HDF5 Library version ")', advance="NO") + ret_total_error = 0 + CALL h5get_libversion_f(majnum, minnum, relnum, ret_total_error) + IF(ret_total_error .EQ. 0) THEN + + WRITE(*, '(/," FORTRANLIB_TEST is linked with HDF5 Library version ")', advance="NO") WRITE(*, '(I0)', advance="NO") majnum WRITE(*, '(".")', advance="NO") WRITE(*, '(I0)', advance="NO") minnum diff --git a/fortran/test/tH5A.F90 b/fortran/test/tH5A.F90 index 2e76dad..115ce70 100644 --- a/fortran/test/tH5A.F90 +++ b/fortran/test/tH5A.F90 @@ -376,7 +376,7 @@ CONTAINS ! Open file ! CALL h5fopen_f(fix_filename, H5F_ACC_RDWR_F, file_id, error) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! ! Reopen dataset ! diff --git a/fortran/test/tH5A_1_8.F90 b/fortran/test/tH5A_1_8.F90 index cd8a981..a825f9d 100644 --- a/fortran/test/tH5A_1_8.F90 +++ b/fortran/test/tH5A_1_8.F90 @@ -317,7 +317,7 @@ SUBROUTINE test_attr_corder_create_compact(fcpl,fapl, total_error) CALL check("h5pclose_f",error,total_error) CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error, fapl) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) CALL h5dopen_f(fid, DSET1_NAME, dset1, error) CALL check("h5dopen_f",error,total_error) @@ -432,7 +432,7 @@ SUBROUTINE test_attr_null_space(fcpl, fapl, total_error) ! Re-open file CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! Create dataspace for dataset attributes CALL h5screate_f(H5S_SCALAR_F, sid, error) CALL check("h5screate_f",error,total_error) @@ -1163,7 +1163,7 @@ SUBROUTINE test_attr_shared_rename( fcpl, fapl, total_error) ! Re-open file CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error,fapl) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! Commit datatype to file IF(test_shared.EQ.2) THEN @@ -1827,7 +1827,7 @@ SUBROUTINE test_attr_shared_delete(fcpl, fapl, total_error) ! Re-open file CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error,fapl) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! Commit datatype to file @@ -2048,7 +2048,7 @@ SUBROUTINE test_attr_dense_open( fcpl, fapl, total_error) ! Re-open file CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error, fapl) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! Create dataspace for dataset CALL h5screate_f(H5S_SCALAR_F, sid, error) @@ -2325,7 +2325,7 @@ SUBROUTINE test_attr_corder_create_basic( fcpl, fapl, total_error ) ! Re-open file CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error, fapl) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! Open dataset created CALL h5dopen_f(fid, DSET1_NAME, dataset, error, H5P_DEFAULT_F ) diff --git a/fortran/test/tH5F.F90 b/fortran/test/tH5F.F90 index 8d4845d..eb37016 100644 --- a/fortran/test/tH5F.F90 +++ b/fortran/test/tH5F.F90 @@ -22,7 +22,7 @@ ! ! CONTAINS SUBROUTINES ! mountingtest, reopentest, get_name_test, plisttest, -! file_close, file_space +! file_close, file_space, h5openclose ! !***** ! @@ -35,6 +35,103 @@ MODULE TH5F CONTAINS + SUBROUTINE h5openclose(total_error) + USE HDF5 ! This module contains all necessary modules + USE TH5_MISC + IMPLICIT NONE + INTEGER, INTENT(INOUT) :: total_error + + ! + ! flag to check operation success + ! + INTEGER :: error + INTEGER(SIZE_T) :: obj_count ! open object count + INTEGER, DIMENSION(1:5) :: obj_type ! open object type to check + INTEGER :: i, j + + DO j = 1, 2 + CALL h5open_f(error) + CALL check("h5open_f",error,total_error) + + obj_type(1) = H5F_OBJ_ALL_F + obj_type(2) = H5F_OBJ_FILE_F + obj_type(3) = H5F_OBJ_GROUP_F + obj_type(4) = H5F_OBJ_DATASET_F + obj_type(5) = H5F_OBJ_DATATYPE_F + + CALL h5close_f(error) + CALL check("h5close_f",error,total_error) + ! Check all the datatypes created during h5open_f are closed in h5close_f + DO i = 1, 5 + CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), obj_type(i), obj_count, error) + CALL check("h5fget_obj_count_f",error,total_error) + IF(obj_count.NE.0)THEN + total_error = total_error + 1 + ENDIF + ENDDO + ENDDO + + ! Test calling h5open_f multiple times without calling h5close_f + DO j = 1, 4 + CALL h5open_f(error) + CALL check("h5open_f",error,total_error) + ENDDO + + CALL h5close_f(error) + CALL check("h5close_f",error,total_error) + ! Check all the datatypes created during h5open_f are closed in h5close_f + DO i = 1, 5 + CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), obj_type(i), obj_count, error) + CALL check("h5fget_obj_count_f",error,total_error) + IF(obj_count.NE.0)THEN + total_error = total_error + 1 + ENDIF + ENDDO + + ! Test calling h5open_f multiple times with a h5close_f in the series of h5open_f + DO j = 1, 5 + CALL h5open_f(error) + CALL check("h5open_f",error,total_error) + IF(j.EQ.3)THEN + CALL h5close_f(error) + CALL check("h5close_f",error,total_error) + ! Check all the datatypes created during h5open_f are closed in h5close_f + DO i = 1, 5 + CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), obj_type(i), obj_count, error) + CALL check("h5fget_obj_count_f",error,total_error) + IF(obj_count.NE.0)THEN + total_error = total_error + 1 + ENDIF + ENDDO + ENDIF + ENDDO + + CALL h5close_f(error) + CALL check("h5close_f",error,total_error) + ! Check all the datatypes created during h5open_f are closed in h5close_f + DO i = 1, 5 + CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), obj_type(i), obj_count, error) + CALL check("h5fget_obj_count_f",error,total_error) + IF(obj_count.NE.0)THEN + total_error = total_error + 1 + ENDIF + ENDDO + + ! Check calling h5close_f after already calling h5close_f + CALL h5close_f(error) + CALL check("h5close_f",error,total_error) + ! Check all the datatypes created during h5open_f are closed in h5close_f + DO i = 1, 5 + CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), obj_type(i), obj_count, error) + CALL check("h5fget_obj_count_f",error,total_error) + IF(obj_count.NE.0)THEN + total_error = total_error + 1 + ENDIF + ENDDO + + RETURN + END SUBROUTINE h5openclose + SUBROUTINE mountingtest(cleanup, total_error) USE HDF5 ! This module contains all necessary modules USE TH5_MISC diff --git a/fortran/test/tH5G_1_8.F90 b/fortran/test/tH5G_1_8.F90 index 222ba9d..bdecd8d 100644 --- a/fortran/test/tH5G_1_8.F90 +++ b/fortran/test/tH5G_1_8.F90 @@ -1923,7 +1923,7 @@ SUBROUTINE lapl_nlinks( fapl, total_error) ! Open file CALL h5fopen_f(FileName, H5F_ACC_RDWR_F, fid, error, fapl) - CALL check("h5open_f",error,total_error) + CALL check("h5fopen_f",error,total_error) ! Create LAPL with higher-than-usual nlinks value ! Create a non-default lapl with udata set to point to the first group diff --git a/fortran/test/tHDF5.F90 b/fortran/test/tHDF5.F90 index db829af..2bd373d 100644 --- a/fortran/test/tHDF5.F90 +++ b/fortran/test/tHDF5.F90 @@ -7,7 +7,7 @@ ! src/fortran/test/tHDF5.f90 ! ! PURPOSE -! This is the test module used for testing the Fortran90 HDF library APIs. +! This is the test module used for testing the Fortran90 HDF library APIs. ! ! COPYRIGHT ! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * diff --git a/fortran/test/tHDF5_F03.F90 b/fortran/test/tHDF5_F03.F90 index 6d318ea..1194b1e 100644 --- a/fortran/test/tHDF5_F03.F90 +++ b/fortran/test/tHDF5_F03.F90 @@ -7,7 +7,7 @@ ! src/fortran/test/tHDF5_F03.f90 ! ! PURPOSE -! This is the test module used for testing the Fortran2003 HDF +! This is the test module used for testing the Fortran2003 HDF ! library APIS. ! ! COPYRIGHT diff --git a/hl/src/H5DS.c b/hl/src/H5DS.c index 387419b..d55512f 100644 --- a/hl/src/H5DS.c +++ b/hl/src/H5DS.c @@ -17,7 +17,7 @@ #include "H5TBprivate.h" /* Local routines */ -static herr_t H5DS_is_reserved(hid_t did); +static herr_t H5DS_is_reserved(hid_t did, hbool_t *is_reserved); /*------------------------------------------------------------------------- * Function: H5DSwith_new_ref @@ -73,7 +73,7 @@ H5DSwith_new_ref(hid_t obj_id, hbool_t *with_new_ref) herr_t H5DSset_scale(hid_t dsid, const char *dimname) { - int has_dimlist; + htri_t has_dimlist; H5I_type_t it; /*------------------------------------------------------------------------- @@ -92,11 +92,10 @@ H5DSset_scale(hid_t dsid, const char *dimname) *------------------------------------------------------------------------- */ - /* try to find the attribute "DIMENSION_LIST" */ - if ((has_dimlist = H5LT_find_attribute(dsid, DIMENSION_LIST)) < 0) + /* Try to find the attribute "DIMENSION_LIST" */ + if ((has_dimlist = H5Aexists(dsid, DIMENSION_LIST)) < 0) return FAIL; - - if (has_dimlist == 1) + if (has_dimlist > 0) return FAIL; /*------------------------------------------------------------------------- @@ -139,8 +138,8 @@ H5DSset_scale(hid_t dsid, const char *dimname) herr_t H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) { - int has_dimlist; - int has_reflist; + htri_t has_dimlist; + htri_t has_reflist; int is_ds; hssize_t nelmts; hid_t sid, sid_w; /* space ID */ @@ -173,6 +172,7 @@ H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) size_t len; int found_ds = 0; htri_t is_scale; + hbool_t is_reserved; /*------------------------------------------------------------------------- * parameter checking @@ -221,12 +221,14 @@ H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) if (H5I_DATASET != it1 || H5I_DATASET != it2) return FAIL; - /* the DS dataset cannot have dimension scales */ - if (H5LT_find_attribute(dsid, DIMENSION_LIST) == 1) + /* The DS dataset cannot have dimension scales */ + if (H5Aexists(dsid, DIMENSION_LIST) > 0) return FAIL; - /* check if the dataset is a "reserved" dataset (image, table) */ - if (H5DS_is_reserved(did) == 1) + /* Check if the dataset is a "reserved" dataset (image, table) */ + if (H5DS_is_reserved(did, &is_reserved) < 0) + return FAIL; + if (is_reserved == TRUE) return FAIL; /*------------------------------------------------------------------------- @@ -279,8 +281,8 @@ H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) if (H5Rcreate(&dsl.ref, did, ".", H5R_OBJECT, (hid_t)-1) < 0) return FAIL; } - /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + /* Try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ + if ((has_dimlist = H5Aexists(did, DIMENSION_LIST)) < 0) return FAIL; /*------------------------------------------------------------------------- @@ -354,7 +356,7 @@ H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) * and insert the new reference *------------------------------------------------------------------------- */ - else if (has_dimlist == 1) { + else if (has_dimlist > 0) { if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; @@ -469,7 +471,7 @@ H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) */ /* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */ - if ((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) + if ((has_reflist = H5Aexists(dsid, REFERENCE_LIST)) < 0) goto out; /*------------------------------------------------------------------------- @@ -530,7 +532,7 @@ H5DSattach_scale(hid_t did, hid_t dsid, unsigned int idx) * the "REFERENCE_LIST" array already exists, open it and extend it *------------------------------------------------------------------------- */ - else if (has_reflist == 1) { + else if (has_reflist > 0) { hid_t tmp_id; /* Temporary DS dataset ID to recreate reference */ int j; @@ -727,8 +729,8 @@ out: herr_t H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) { - int has_dimlist; - int has_reflist; + htri_t has_dimlist; + htri_t has_reflist; hssize_t nelmts; hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */ hid_t did_i; /* dataset ID in REFERENCE_LIST */ @@ -804,10 +806,9 @@ H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) *------------------------------------------------------------------------- */ - /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + /* Try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ + if ((has_dimlist = H5Aexists(did, DIMENSION_LIST)) < 0) return FAIL; - if (has_dimlist == 0) return FAIL; @@ -833,9 +834,8 @@ H5DSdetach_scale(hid_t did, hid_t dsid, unsigned int idx) */ /* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */ - if ((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) + if ((has_reflist = H5Aexists(dsid, REFERENCE_LIST)) < 0) return FAIL; - if (has_reflist == 0) return FAIL; @@ -1228,8 +1228,8 @@ out: htri_t H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) { - int has_dimlist; - int has_reflist; + htri_t has_dimlist; + htri_t has_reflist; hssize_t nelmts; hid_t sid; /* space ID */ hid_t tid = H5I_INVALID_HID; /* attribute type ID */ @@ -1319,7 +1319,7 @@ H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) return FAIL; /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + if ((has_dimlist = H5Aexists(did, DIMENSION_LIST)) < 0) return FAIL; /*------------------------------------------------------------------------- @@ -1327,7 +1327,7 @@ H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) *------------------------------------------------------------------------- */ - if (has_dimlist == 1) { + if (has_dimlist > 0) { if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; @@ -1407,7 +1407,7 @@ H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) */ /* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */ - if ((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0) + if ((has_reflist = H5Aexists(dsid, REFERENCE_LIST)) < 0) goto out; /*------------------------------------------------------------------------- @@ -1415,7 +1415,7 @@ H5DSis_attached(hid_t did, hid_t dsid, unsigned int idx) *------------------------------------------------------------------------- */ - if (has_reflist == 1) { + if (has_reflist > 0) { if ((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0) goto out; @@ -1610,7 +1610,7 @@ H5DSiterate_scales(hid_t did, unsigned int dim, int *ds_idx, H5DS_iterate_t visi herr_t ret_value = 0; int j_idx; int nscales; - int has_dimlist; + htri_t has_dimlist; int i; hbool_t is_new_ref; @@ -1658,14 +1658,13 @@ H5DSiterate_scales(hid_t did, unsigned int dim, int *ds_idx, H5DS_iterate_t visi if (dim >= (unsigned)rank) return FAIL; - /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + /* Try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ + if ((has_dimlist = H5Aexists(did, DIMENSION_LIST)) < 0) return FAIL; - if (has_dimlist == 0) return SUCCEED; - else if (has_dimlist == 1) { + else if (has_dimlist > 0) { if ((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0) goto out; if ((tid = H5Aget_type(aid)) < 0) @@ -1788,7 +1787,7 @@ out: herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { - int has_labels; + htri_t has_labels; hid_t sid = H5I_INVALID_HID; /* space ID */ hid_t tid = H5I_INVALID_HID; /* attribute type ID */ hid_t aid = H5I_INVALID_HID; /* attribute ID */ @@ -1838,7 +1837,7 @@ H5DSset_label(hid_t did, unsigned int idx, const char *label) */ /* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ - if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0) + if ((has_labels = H5Aexists(did, DIMENSION_LABELS)) < 0) return FAIL; /*------------------------------------------------------------------------- @@ -1991,7 +1990,7 @@ out: ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { - int has_labels; + htri_t has_labels; hid_t sid = H5I_INVALID_HID; /* space ID */ hid_t tid = H5I_INVALID_HID; /* attribute type ID */ hid_t aid = H5I_INVALID_HID; /* attribute ID */ @@ -2033,11 +2032,11 @@ H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) *------------------------------------------------------------------------- */ - /* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ - if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0) + /* Try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ + if ((has_labels = H5Aexists(did, DIMENSION_LABELS)) < 0) return FAIL; - /* return 0 and NULL for label if no label found */ + /* Return 0 and NULL for label if no label found */ if (has_labels == 0) { if (label) label[0] = 0; @@ -2049,7 +2048,6 @@ H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) *------------------------------------------------------------------------- */ - assert(has_labels == 1); if ((aid = H5Aopen(did, DIMENSION_LABELS, H5P_DEFAULT)) < 0) goto out; @@ -2146,7 +2144,7 @@ H5DSget_scale_name(hid_t did, char *name, size_t size) H5I_type_t it; /* ID type */ size_t nbytes; size_t copy_len; - int has_name; + htri_t has_name; char * buf = NULL; /*------------------------------------------------------------------------- @@ -2169,9 +2167,8 @@ H5DSget_scale_name(hid_t did, char *name, size_t size) */ /* try to find the attribute "NAME" on the >>DS<< dataset */ - if ((has_name = H5LT_find_attribute(did, "NAME")) < 0) + if ((has_name = H5Aexists(did, "NAME")) < 0) return FAIL; - if (has_name == 0) return 0; @@ -2259,7 +2256,7 @@ H5DSis_scale(hid_t did) { hid_t tid = H5I_INVALID_HID; /* attribute type ID */ hid_t aid = H5I_INVALID_HID; /* attribute ID */ - herr_t attr_class; /* has the "CLASS" attribute */ + htri_t attr_class; /* has the "CLASS" attribute */ htri_t is_ds = -1; /* set to "not a dimension scale" */ H5I_type_t it; /* type of identifier */ char * buf = NULL; /* buffer to read name of attribute */ @@ -2279,7 +2276,7 @@ H5DSis_scale(hid_t did) goto out; /* try to find the attribute "CLASS" on the dataset */ - if ((attr_class = H5LT_find_attribute(did, "CLASS")) < 0) + if ((attr_class = H5Aexists(did, "CLASS")) < 0) goto out; if (attr_class == 0) { @@ -2370,7 +2367,7 @@ out: int H5DSget_num_scales(hid_t did, unsigned int idx) { - int has_dimlist; + htri_t has_dimlist; hid_t sid; /* space ID */ hid_t tid = H5I_INVALID_HID; /* attribute type ID */ hid_t aid = H5I_INVALID_HID; /* attribute ID */ @@ -2410,11 +2407,11 @@ H5DSget_num_scales(hid_t did, unsigned int idx) if (idx >= (unsigned int)rank) return FAIL; - /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ - if ((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) + /* Try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ + if ((has_dimlist = H5Aexists(did, DIMENSION_LIST)) < 0) return FAIL; - /* it does not exist */ + /* No scales */ if (has_dimlist == 0) return 0; @@ -2475,86 +2472,77 @@ out: /*------------------------------------------------------------------------- * Function: H5DS_is_reserved * - * Purpose: Verify that a dataset's CLASS is either an image, palette or table - * - * Return: true, false, fail - * - * Programmer: Pedro Vicente - * - * Date: March 19, 2005 + * Purpose: Verify that a dataset's CLASS is either an image, palette or + * table * + * Return: SUCCEED/FAIL *------------------------------------------------------------------------- */ static herr_t -H5DS_is_reserved(hid_t did) +H5DS_is_reserved(hid_t did, hbool_t *is_reserved) { - int has_class; + htri_t has_class; hid_t tid = H5I_INVALID_HID; hid_t aid = H5I_INVALID_HID; char * buf = NULL; /* Name of attribute */ size_t string_size; /* Size of storage for attribute */ - herr_t ret; - - /* try to find the attribute "CLASS" on the dataset */ - if ((has_class = H5LT_find_attribute(did, "CLASS")) < 0) - return -1; - if (has_class == 0) - return 0; + /* Try to find the attribute "CLASS" on the dataset */ + if ((has_class = H5Aexists(did, "CLASS")) < 0) + return FAIL; + if (has_class == 0) { + *is_reserved = FALSE; + return SUCCEED; + } - assert(has_class == 1); if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) - goto out; - + goto error; if ((tid = H5Aget_type(aid)) < 0) - goto out; + goto error; - /* check to make sure attribute is a string */ + /* Check to make sure attribute is a string */ if (H5T_STRING != H5Tget_class(tid)) - goto out; + goto error; - /* check to make sure string is null-terminated */ + /* Check to make sure string is null-terminated */ if (H5T_STR_NULLTERM != H5Tget_strpad(tid)) - goto out; + goto error; - /* allocate buffer large enough to hold string */ + /* Allocate buffer large enough to hold string */ if ((string_size = H5Tget_size(tid)) == 0) - goto out; - - buf = (char *)HDmalloc((size_t)string_size * sizeof(char)); - if (buf == NULL) - goto out; + goto error; + if (NULL == (buf = HDmalloc(string_size * sizeof(char)))) + goto error; /* Read the attribute */ if (H5Aread(aid, tid, buf) < 0) - goto out; + goto error; if (HDstrncmp(buf, IMAGE_CLASS, MIN(HDstrlen(IMAGE_CLASS), HDstrlen(buf))) == 0 || HDstrncmp(buf, PALETTE_CLASS, MIN(HDstrlen(PALETTE_CLASS), HDstrlen(buf))) == 0 || HDstrncmp(buf, TABLE_CLASS, MIN(HDstrlen(TABLE_CLASS), HDstrlen(buf))) == 0) - ret = 1; + *is_reserved = TRUE; else - ret = 0; + *is_reserved = FALSE; HDfree(buf); if (H5Tclose(tid) < 0) - goto out; - + goto error; if (H5Aclose(aid) < 0) - goto out; + goto error; - return ret; + return SUCCEED; - /* error zone */ -out: +error: H5E_BEGIN_TRY { - if (buf) - HDfree(buf); H5Tclose(tid); H5Aclose(aid); } H5E_END_TRY; + + HDfree(buf); + return FAIL; } diff --git a/hl/src/H5IM.c b/hl/src/H5IM.c index ff10d57..75f2e28 100644 --- a/hl/src/H5IM.c +++ b/hl/src/H5IM.c @@ -228,7 +228,6 @@ H5IM_find_palette(hid_t loc_id) * *------------------------------------------------------------------------- */ - herr_t H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t *height, hsize_t *planes, char *interlace, hssize_t *npals) @@ -241,7 +240,7 @@ H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t hid_t atid = -1; H5T_class_t aclass; int has_pal; - int has_attr; + hid_t has_attr; /* check the arguments */ if (dset_name == NULL) @@ -257,11 +256,11 @@ H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t return -1; /* Try to find the attribute "INTERLACE_MODE" on the >>image<< dataset */ - if ((has_attr = H5LT_find_attribute(did, "INTERLACE_MODE")) < 0) + if ((has_attr = H5Aexists(did, "INTERLACE_MODE")) < 0) goto out; /* It exists, get it */ - if (has_attr == 1) { + if (has_attr > 0) { if ((aid = H5Aopen(did, "INTERLACE_MODE", H5P_DEFAULT)) < 0) goto out; @@ -289,9 +288,8 @@ H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t /* Initialize the image dimensions */ - if (has_attr == 1) - /* This is a 24 bit image */ - { + if (has_attr > 0) { + /* This is a 24 bit image */ if (HDstrncmp(interlace, "INTERLACE_PIXEL", 15) == 0) { /* Number of color planes is defined as the third dimension */ @@ -308,9 +306,8 @@ H5IMget_image_info(hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t else return -1; } - else - /* This is a 8 bit image */ - { + else { + /* This is a 8 bit image */ *height = dims[0]; *width = dims[1]; *planes = 1; @@ -512,7 +509,7 @@ H5IMlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) hobj_ref_t *refbuf; /* buffer to read references */ hssize_t n_refs; hsize_t dim_ref; - int ok_pal; + htri_t ok_pal; /* check the arguments */ if (image_name == NULL) @@ -531,7 +528,8 @@ H5IMlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ - ok_pal = H5LT_find_attribute(did, "PALETTE"); + if ((ok_pal = H5Aexists(did, "PALETTE")) < 0) + goto out; /*------------------------------------------------------------------------- * It does not exist. We create the attribute and one reference @@ -570,7 +568,7 @@ H5IMlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) * The attribute already exists, open it *------------------------------------------------------------------------- */ - else if (ok_pal == 1) { + else if (ok_pal > 0) { if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; @@ -631,7 +629,7 @@ H5IMlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) HDfree(refbuf); - } /* ok_pal == 1 */ + } /* ok_pal > 0 */ /* Close the image dataset. */ if (H5Dclose(did) < 0) @@ -673,7 +671,8 @@ H5IMunlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) hid_t atid; hid_t aid; H5T_class_t aclass; - int ok_pal, has_pal; + htri_t ok_pal; + int has_pal; /* check the arguments */ if (image_name == NULL) @@ -699,14 +698,14 @@ H5IMunlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) return -1; /* Try to find the attribute "PALETTE" on the >>image<< dataset */ - ok_pal = H5LT_find_attribute(did, "PALETTE"); + if ((ok_pal = H5Aexists(did, "PALETTE")) < 0) + goto out; /* It does not exist. Nothing to do */ if (ok_pal == 0) - return -1; - - /* The attribute exists, open it */ - else if (ok_pal == 1) { + goto out; + else if (ok_pal > 0) { + /* The attribute exists, open it */ if ((aid = H5Aopen(did, "PALETTE", H5P_DEFAULT)) < 0) goto out; @@ -730,8 +729,7 @@ H5IMunlink_palette(hid_t loc_id, const char *image_name, const char *pal_name) /* Close the attribute. */ if (H5Aclose(aid) < 0) goto out; - - } /* ok_pal */ + } /* Close the image dataset. */ if (H5Dclose(did) < 0) @@ -1063,7 +1061,7 @@ herr_t H5IMis_image(hid_t loc_id, const char *dset_name) { hid_t did; - int has_class; + htri_t has_class; hid_t atid; hid_t aid = -1; char * attr_data; /* Name of attribute */ @@ -1082,13 +1080,14 @@ H5IMis_image(hid_t loc_id, const char *dset_name) return -1; /* Try to find the attribute "CLASS" on the dataset */ - has_class = H5LT_find_attribute(did, "CLASS"); + if ((has_class = H5Aexists(did, "CLASS")) < 0) + goto out; if (has_class == 0) { H5Dclose(did); return 0; } - else if (has_class == 1) { + else { if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) goto out; @@ -1163,7 +1162,7 @@ herr_t H5IMis_palette(hid_t loc_id, const char *dset_name) { hid_t did; - int has_class; + htri_t has_class; hid_t atid; hid_t aid = -1; char * attr_data; /* Name of attribute */ @@ -1182,13 +1181,14 @@ H5IMis_palette(hid_t loc_id, const char *dset_name) return -1; /* Try to find the attribute "CLASS" on the dataset */ - has_class = H5LT_find_attribute(did, "CLASS"); + if ((has_class = H5Aexists(did, "CLASS")) < 0) + goto out; if (has_class == 0) { H5Dclose(did); return 0; } - else if (has_class == 1) { + else { if ((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0) goto out; diff --git a/hl/src/H5LT.c b/hl/src/H5LT.c index 238bbf2..78cc301 100644 --- a/hl/src/H5LT.c +++ b/hl/src/H5LT.c @@ -1385,7 +1385,6 @@ H5_GCC_CLANG_DIAG_ON("cast-qual") * *------------------------------------------------------------------------- */ - herr_t H5LTset_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_name, const char *attr_data) { @@ -1393,7 +1392,7 @@ H5LTset_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_na hid_t attr_space_id; hid_t attr_id; hid_t obj_id; - int has_attr; + htri_t has_attr; size_t attr_size; /* check the arguments */ @@ -1423,11 +1422,10 @@ H5LTset_attribute_string(hid_t loc_id, const char *obj_name, const char *attr_na if ((attr_space_id = H5Screate(H5S_SCALAR)) < 0) goto out; - /* Verify if the attribute already exists */ - has_attr = H5LT_find_attribute(obj_id, attr_name); - - /* The attribute already exists, delete it */ - if (has_attr == 1) + /* Delete the attribute if it already exists */ + if ((has_attr = H5Aexists(obj_id, attr_name)) < 0) + goto out; + if (has_attr > 0) if (H5Adelete(obj_id, attr_name) < 0) goto out; @@ -1483,7 +1481,7 @@ H5LT_set_attribute_numerical(hid_t loc_id, const char *obj_name, const char *att hid_t obj_id, sid, attr_id; hsize_t dim_size = size; - int has_attr; + htri_t has_attr; /* check the arguments */ if (obj_name == NULL) @@ -1499,11 +1497,10 @@ H5LT_set_attribute_numerical(hid_t loc_id, const char *obj_name, const char *att if ((sid = H5Screate_simple(1, &dim_size, NULL)) < 0) goto out; - /* Verify if the attribute already exists */ - has_attr = H5LT_find_attribute(obj_id, attr_name); - - /* The attribute already exists, delete it */ - if (has_attr == 1) + /* Delete the attribute if it already exists */ + if ((has_attr = H5Aexists(obj_id, attr_name)) < 0) + goto out; + if (has_attr > 0) if (H5Adelete(obj_id, attr_name) < 0) goto out; @@ -1858,49 +1855,24 @@ H5LTset_attribute_double(hid_t loc_id, const char *obj_name, const char *attr_na /*------------------------------------------------------------------------- * Function: H5LTfind_attribute * - * Purpose: Inquires if an attribute named attr_name exists attached to - * the object loc_id. - * - * Programmer: Pedro Vicente - * - * Date: May 17, 2006 + * Purpose: Checks if an attribute named attr_name exists attached to + * the object loc_id * - * Comments: - * Calls the private version of the function + * TODO: Overloading herr_t is not a great idea. This function either + * needs to be rewritten to take a Boolean out parameter in + * HDF5 2.0 or possibly even eliminated entirely as it simply + * wraps H5Aexists. * + * Return: An htri_t value cast to herr_t + * Exists: Positive + * Does not exist: 0 + * Error: Negative *------------------------------------------------------------------------- */ - herr_t H5LTfind_attribute(hid_t loc_id, const char *attr_name) { - return H5LT_find_attribute(loc_id, attr_name); -} - -/*------------------------------------------------------------------------- - * Function: H5LT_find_attribute - * - * Purpose: Inquires if an attribute named attr_name exists attached to the object loc_id. - * - * Programmer: Pedro Vicente - * - * Date: June 21, 2001 - * - * Return: - * Success: Positive if the attribute exists attached to the - * object loc_id. Zero if the attribute does not - * exist attached to the object loc_id. - * - * Failure: Negative if something goes wrong within the - * library. - * - *------------------------------------------------------------------------- - */ -herr_t -H5LT_find_attribute(hid_t loc_id, const char *attr_name) -{ - htri_t attr_exists = H5Aexists(loc_id, attr_name); - return (attr_exists < 0) ? (herr_t)-1 : (attr_exists) ? (herr_t)1 : (herr_t)0; + return (herr_t)H5Aexists(loc_id, attr_name); } /*------------------------------------------------------------------------- @@ -3539,14 +3511,13 @@ H5LT_set_attribute_string(hid_t dset_id, const char *name, const char *buf) hid_t tid; hid_t sid = -1; hid_t aid = -1; - int has_attr; + htri_t has_attr; size_t size; - /* verify if the attribute already exists */ - has_attr = H5LT_find_attribute(dset_id, name); - - /* the attribute already exists, delete it */ - if (has_attr == 1) + /* Delete the attribute if it already exists */ + if ((has_attr = H5Aexists(dset_id, name)) < 0) + return FAIL; + if (has_attr > 0) if (H5Adelete(dset_id, name) < 0) return FAIL; diff --git a/hl/src/H5LTprivate.h b/hl/src/H5LTprivate.h index 5a97d9c..e5c4e4e 100644 --- a/hl/src/H5LTprivate.h +++ b/hl/src/H5LTprivate.h @@ -20,23 +20,12 @@ /* public LT prototypes */ #include "H5LTpublic.h" -/*------------------------------------------------------------------------- - * Private functions - *------------------------------------------------------------------------- - */ - H5_HLDLL herr_t H5LT_get_attribute_disk(hid_t obj_id, const char *attr_name, void *data); - H5_HLDLL herr_t H5LT_set_attribute_numerical(hid_t loc_id, const char *obj_name, const char *attr_name, size_t size, hid_t type_id, const void *data); - H5_HLDLL herr_t H5LT_set_attribute_string(hid_t dset_id, const char *name, const char *buf); - -H5_HLDLL herr_t H5LT_find_attribute(hid_t loc_id, const char *name); - -H5_HLDLL char *H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *slen, - hbool_t no_user_buf); - -H5_HLDLL hid_t H5LTyyparse(void); +H5_HLDLL char * H5LT_dtype_to_text(hid_t dtype, char *dt_str, H5LT_lang_t lang, size_t *slen, + hbool_t no_user_buf); +H5_HLDLL hid_t H5LTyyparse(void); #endif diff --git a/hl/src/H5TB.c b/hl/src/H5TB.c index efa61a3..eda3a35 100644 --- a/hl/src/H5TB.c +++ b/hl/src/H5TB.c @@ -2585,11 +2585,11 @@ H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); /* check if we have the _FILL attribute */ - if ((has_fill = H5LT_find_attribute(did_1, attr_name)) < 0) + if ((has_fill = H5Aexists(did_1, attr_name)) < 0) goto out; /* get it */ - if (has_fill) + if (has_fill > 0) if (H5LT_get_attribute_disk(did_1, attr_name, tmp_fill_buf + curr_offset) < 0) goto out; @@ -2747,7 +2747,7 @@ H5TBdelete_field(hid_t loc_id, const char *dset_name, const char *field_name) * attach the fill attributes from previous table *------------------------------------------------------------------------- */ - if (has_fill) { + if (has_fill > 0) { if ((sid_1 = H5Screate(H5S_SCALAR)) < 0) goto out; @@ -2918,15 +2918,15 @@ H5TBAget_fill(hid_t loc_id, const char *dset_name, hid_t dset_id, unsigned char for (i = 0; i < nfields; i++) { HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i); - /* check if we have the _FILL attribute */ - if ((has_fill = H5LT_find_attribute(dset_id, attr_name)) < 0) + /* Check if we have the _FILL attribute */ + if ((has_fill = H5Aexists(dset_id, attr_name)) < 0) goto out; /* get it */ - if (has_fill) + if (has_fill > 0) if (H5LT_get_attribute_disk(dset_id, attr_name, dst_buf + src_offset[i]) < 0) goto out; - } /* end for */ + } ret_val = has_fill; diff --git a/java/examples/datasets/CMakeLists.txt b/java/examples/datasets/CMakeLists.txt index 8198135..e63ead0 100644 --- a/java/examples/datasets/CMakeLists.txt +++ b/java/examples/datasets/CMakeLists.txt @@ -62,6 +62,13 @@ foreach (example ${HDF_JAVA_EXAMPLES}) # install_jar (${example} ${HJAVA_INSTALL_DATA_DIR}/examples examples) get_target_property (${example}_CLASSPATH ${example} CLASSDIR) add_dependencies (${example} ${HDF5_JAVA_HDF5_LIB_TARGET}) + + #----------------------------------------------------------------------------- + # Add Target to clang-format + #----------------------------------------------------------------------------- + if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_JAVA_${example}_SRC_FORMAT ${example}.java) + endif () endforeach () set (CMAKE_JAVA_INCLUDE_PATH "${HDF5_JAVA_JARS};${HDF5_JAVA_LOGGING_JAR};${HDF5_JAVA_LOGGING_NOP_JAR}") diff --git a/java/examples/datasets/H5Ex_D_Alloc.java b/java/examples/datasets/H5Ex_D_Alloc.java index 4e10c23..4853cc0 100644 --- a/java/examples/datasets/H5Ex_D_Alloc.java +++ b/java/examples/datasets/H5Ex_D_Alloc.java @@ -29,49 +29,47 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Alloc { - private static String FILENAME = "H5Ex_D_Alloc.h5"; + private static String FILENAME = "H5Ex_D_Alloc.h5"; private static String DATASETNAME1 = "DS1"; private static String DATASETNAME2 = "DS2"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int FILLVAL = 99; - private static final int RANK = 2; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int FILLVAL = 99; + private static final int RANK = 2; // Values for the status of space allocation enum H5D_space_status { - H5D_SPACE_STATUS_ERROR(-1), H5D_SPACE_STATUS_NOT_ALLOCATED(0), H5D_SPACE_STATUS_PART_ALLOCATED(1), H5D_SPACE_STATUS_ALLOCATED( - 2); + H5D_SPACE_STATUS_ERROR(-1), + H5D_SPACE_STATUS_NOT_ALLOCATED(0), + H5D_SPACE_STATUS_PART_ALLOCATED(1), + H5D_SPACE_STATUS_ALLOCATED(2); private static final Map lookup = new HashMap(); - static { + static + { for (H5D_space_status s : EnumSet.allOf(H5D_space_status.class)) lookup.put(s.getCode(), s); } private int code; - H5D_space_status(int space_status) { - this.code = space_status; - } + H5D_space_status(int space_status) { this.code = space_status; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5D_space_status get(int code) { - return lookup.get(code); - } + public static H5D_space_status get(int code) { return lookup.get(code); } } - private static void allocation() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void allocation() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id1 = HDF5Constants.H5I_INVALID_HID; - long dataset_id2 = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id1 = HDF5Constants.H5I_INVALID_HID; + long dataset_id2 = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; - int space_status = 0; + int space_status = 0; long storage_size = 0; // Initialize the dataset. @@ -82,7 +80,7 @@ public class H5Ex_D_Alloc { // Create a file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -125,7 +123,8 @@ public class H5Ex_D_Alloc { try { if ((file_id >= 0) && (filespace_id >= 0)) dataset_id1 = H5.H5Dcreate(file_id, DATASETNAME1, HDF5Constants.H5T_NATIVE_INT, filespace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -135,7 +134,7 @@ public class H5Ex_D_Alloc { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id2 = H5.H5Dcreate(file_id, DATASETNAME2, HDF5Constants.H5T_NATIVE_INT, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -190,16 +189,16 @@ public class H5Ex_D_Alloc { // Write the data to the datasets. try { if (dataset_id1 >= 0) - H5.H5Dwrite(dataset_id1, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data[0]); + H5.H5Dwrite(dataset_id1, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data[0]); } catch (Exception e) { e.printStackTrace(); } try { if (dataset_id2 >= 0) - H5.H5Dwrite(dataset_id2, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data[0]); + H5.H5Dwrite(dataset_id2, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data[0]); } catch (Exception e) { e.printStackTrace(); @@ -291,8 +290,5 @@ public class H5Ex_D_Alloc { } } - public static void main(String[] args) { - H5Ex_D_Alloc.allocation(); - } - + public static void main(String[] args) { H5Ex_D_Alloc.allocation(); } } diff --git a/java/examples/datasets/H5Ex_D_Checksum.java b/java/examples/datasets/H5Ex_D_Checksum.java index 781dd68..7b01176 100644 --- a/java/examples/datasets/H5Ex_D_Checksum.java +++ b/java/examples/datasets/H5Ex_D_Checksum.java @@ -30,42 +30,46 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Checksum { - private static String FILENAME = "H5Ex_D_Checksum.h5"; + private static String FILENAME = "H5Ex_D_Checksum.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(-1), H5Z_FILTER_NONE(0), H5Z_FILTER_DEFLATE(1), H5Z_FILTER_SHUFFLE(2), H5Z_FILTER_FLETCHER32(3), H5Z_FILTER_SZIP( - 4), H5Z_FILTER_NBIT(5), H5Z_FILTER_SCALEOFFSET(6), H5Z_FILTER_RESERVED(256), H5Z_FILTER_MAX(65535); + H5Z_FILTER_ERROR(-1), + H5Z_FILTER_NONE(0), + H5Z_FILTER_DEFLATE(1), + H5Z_FILTER_SHUFFLE(2), + H5Z_FILTER_FLETCHER32(3), + H5Z_FILTER_SZIP(4), + H5Z_FILTER_NBIT(5), + H5Z_FILTER_SCALEOFFSET(6), + H5Z_FILTER_RESERVED(256), + H5Z_FILTER_MAX(65535); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkFletcher32Filter() { + private static boolean checkFletcher32Filter() + { try { int available = H5.H5Zfilter_avail(H5Z_filter.H5Z_FILTER_FLETCHER32.getCode()); if (available == 0) { @@ -79,8 +83,8 @@ public class H5Ex_D_Checksum { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_FLETCHER32); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("N-Bit filter not available for encoding and decoding."); return false; } @@ -91,13 +95,14 @@ public class H5Ex_D_Checksum { return true; } - private static void writeChecksum() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeChecksum() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -108,7 +113,7 @@ public class H5Ex_D_Checksum { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -140,7 +145,7 @@ public class H5Ex_D_Checksum { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -149,8 +154,8 @@ public class H5Ex_D_Checksum { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -191,10 +196,11 @@ public class H5Ex_D_Checksum { } } - private static void readChecksum() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readChecksum() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -228,14 +234,14 @@ public class H5Ex_D_Checksum { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -264,7 +270,7 @@ public class H5Ex_D_Checksum { try { if (dataset_id >= 0) { int status = H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, - HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); // Check if the read was successful. Normally we do not perform // error checking in these examples for the sake of clarity, but in // this case we will make an exception because this is how the @@ -328,7 +334,8 @@ public class H5Ex_D_Checksum { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if the Fletcher32 filter is available and can be used for // both encoding and decoding. Normally we do not perform error // checking in these examples for the sake of clarity, but in this @@ -340,5 +347,4 @@ public class H5Ex_D_Checksum { H5Ex_D_Checksum.readChecksum(); } } - } diff --git a/java/examples/datasets/H5Ex_D_Chunk.java b/java/examples/datasets/H5Ex_D_Chunk.java index 2ddf293..fbfc148 100644 --- a/java/examples/datasets/H5Ex_D_Chunk.java +++ b/java/examples/datasets/H5Ex_D_Chunk.java @@ -30,47 +30,48 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Chunk { - private static String FILENAME = "H5Ex_D_Chunk.h5"; + private static String FILENAME = "H5Ex_D_Chunk.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 6; - private static final int DIM_Y = 8; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 4; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 6; + private static final int DIM_Y = 8; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 4; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5D_layout { - H5D_LAYOUT_ERROR(-1), H5D_COMPACT(0), H5D_CONTIGUOUS(1), H5D_CHUNKED(2), H5D_VIRTUAL(3), H5D_NLAYOUTS(4); + H5D_LAYOUT_ERROR(-1), + H5D_COMPACT(0), + H5D_CONTIGUOUS(1), + H5D_CHUNKED(2), + H5D_VIRTUAL(3), + H5D_NLAYOUTS(4); private static final Map lookup = new HashMap(); - static { + static + { for (H5D_layout s : EnumSet.allOf(H5D_layout.class)) lookup.put(s.getCode(), s); } private int code; - H5D_layout(int layout_type) { - this.code = layout_type; - } + H5D_layout(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5D_layout get(int code) { - return lookup.get(code); - } + public static H5D_layout get(int code) { return lookup.get(code); } } - private static void writeChunk() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeChunk() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data to "1", to make it easier to see the selections. @@ -91,7 +92,7 @@ public class H5Ex_D_Chunk { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -127,20 +128,21 @@ public class H5Ex_D_Chunk { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Define and select the first part of the hyperslab selection. - long[] start = { 0, 0 }; - long[] stride = { 3, 3 }; - long[] count = { 2, 3 }; - long[] block = { 2, 2 }; + long[] start = {0, 0}; + long[] stride = {3, 3}; + long[] count = {2, 3}; + long[] block = {2, 2}; try { if ((filespace_id >= 0)) - H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, block); + H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, + block); } catch (Exception e) { e.printStackTrace(); @@ -152,12 +154,13 @@ public class H5Ex_D_Chunk { block[1] = 1; try { if ((filespace_id >= 0)) { - H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_NOTB, start, stride, count, block); + H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_NOTB, start, stride, count, + block); // Write the data to the dataset. if (dataset_id >= 0) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, filespace_id, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } } catch (Exception e) { @@ -199,11 +202,12 @@ public class H5Ex_D_Chunk { } } - private static void readChunk() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void readChunk() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -267,8 +271,8 @@ public class H5Ex_D_Chunk { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -294,18 +298,19 @@ public class H5Ex_D_Chunk { if (dataset_id >= 0) { filespace_id = H5.H5Dget_space(dataset_id); - long[] start = { 0, 1 }; - long[] stride = { 4, 4 }; - long[] count = { 2, 2 }; - long[] block = { 2, 3 }; + long[] start = {0, 1}; + long[] stride = {4, 4}; + long[] count = {2, 2}; + long[] block = {2, 3}; if (filespace_id >= 0) { - H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, block); + H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, + block); // Read the data using the previously defined hyperslab. if ((dataset_id >= 0) && (filespace_id >= 0)) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, filespace_id, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + filespace_id, HDF5Constants.H5P_DEFAULT, dset_data); } } } @@ -358,9 +363,9 @@ public class H5Ex_D_Chunk { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_Chunk.writeChunk(); H5Ex_D_Chunk.readChunk(); } - } diff --git a/java/examples/datasets/H5Ex_D_Compact.java b/java/examples/datasets/H5Ex_D_Compact.java index 0abf8da..3a60283 100644 --- a/java/examples/datasets/H5Ex_D_Compact.java +++ b/java/examples/datasets/H5Ex_D_Compact.java @@ -27,43 +27,44 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Compact { - private static String FILENAME = "H5Ex_D_Compact.h5"; + private static String FILENAME = "H5Ex_D_Compact.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int RANK = 2; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int RANK = 2; // Values for the status of space allocation enum H5D_layout { - H5D_LAYOUT_ERROR(-1), H5D_COMPACT(0), H5D_CONTIGUOUS(1), H5D_CHUNKED(2), H5D_VIRTUAL(3), H5D_NLAYOUTS(4); + H5D_LAYOUT_ERROR(-1), + H5D_COMPACT(0), + H5D_CONTIGUOUS(1), + H5D_CHUNKED(2), + H5D_VIRTUAL(3), + H5D_NLAYOUTS(4); private static final Map lookup = new HashMap(); - static { + static + { for (H5D_layout s : EnumSet.allOf(H5D_layout.class)) lookup.put(s.getCode(), s); } private int code; - H5D_layout(int layout_type) { - this.code = layout_type; - } + H5D_layout(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5D_layout get(int code) { - return lookup.get(code); - } + public static H5D_layout get(int code) { return lookup.get(code); } } - private static void writeCompact() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeCompact() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -74,7 +75,7 @@ public class H5Ex_D_Compact { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -110,7 +111,7 @@ public class H5Ex_D_Compact { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -119,8 +120,8 @@ public class H5Ex_D_Compact { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -161,11 +162,12 @@ public class H5Ex_D_Compact { } } - private static void readCompact() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void readCompact() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open file and dataset using the default properties. @@ -229,8 +231,8 @@ public class H5Ex_D_Compact { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -281,9 +283,9 @@ public class H5Ex_D_Compact { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_Compact.writeCompact(); H5Ex_D_Compact.readCompact(); } - } diff --git a/java/examples/datasets/H5Ex_D_External.java b/java/examples/datasets/H5Ex_D_External.java index 9c3787f..d706fb7 100644 --- a/java/examples/datasets/H5Ex_D_External.java +++ b/java/examples/datasets/H5Ex_D_External.java @@ -24,20 +24,21 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_External { - private static String FILENAME = "H5Ex_D_External.h5"; - private static String EXTERNALNAME = "H5Ex_D_External.data"; - private static String DATASETNAME = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int RANK = 2; + private static String FILENAME = "H5Ex_D_External.h5"; + private static String EXTERNALNAME = "H5Ex_D_External.data"; + private static String DATASETNAME = "DS1"; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int RANK = 2; private static final int NAME_BUF_SIZE = 32; - private static void writeExternal() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void writeExternal() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize the dataset. @@ -48,7 +49,7 @@ public class H5Ex_D_External { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -84,7 +85,7 @@ public class H5Ex_D_External { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -92,8 +93,8 @@ public class H5Ex_D_External { // Write the dataset. try { - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -133,15 +134,15 @@ public class H5Ex_D_External { catch (Exception e) { e.printStackTrace(); } - } - private static void readExternal() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + private static void readExternal() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; - String[] Xname = new String[1]; + String[] Xname = new String[1]; // Open file using the default properties. try { @@ -183,8 +184,8 @@ public class H5Ex_D_External { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -227,9 +228,9 @@ public class H5Ex_D_External { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_External.writeExternal(); H5Ex_D_External.readExternal(); } - } diff --git a/java/examples/datasets/H5Ex_D_FillValue.java b/java/examples/datasets/H5Ex_D_FillValue.java index 3526993..db4dff7 100644 --- a/java/examples/datasets/H5Ex_D_FillValue.java +++ b/java/examples/datasets/H5Ex_D_FillValue.java @@ -26,29 +26,30 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_FillValue { - private static String FILENAME = "H5Ex_D_FillValue.h5"; + private static String FILENAME = "H5Ex_D_FillValue.h5"; private static String DATASETNAME = "ExtendibleArray"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int EDIM_X = 6; - private static final int EDIM_Y = 10; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 4; - private static final int RANK = 2; - private static final int NDIMS = 2; - private static final int FILLVAL = 99; - - private static void fillValue() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] extdims = { EDIM_X, EDIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; - long[] maxdims = { HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED }; - int[][] write_dset_data = new int[DIM_X][DIM_Y]; - int[][] read_dset_data = new int[DIM_X][DIM_Y]; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int EDIM_X = 6; + private static final int EDIM_Y = 10; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 4; + private static final int RANK = 2; + private static final int NDIMS = 2; + private static final int FILLVAL = 99; + + private static void fillValue() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] extdims = {EDIM_X, EDIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; + long[] maxdims = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED}; + int[][] write_dset_data = new int[DIM_X][DIM_Y]; + int[][] read_dset_data = new int[DIM_X][DIM_Y]; int[][] extend_dset_data = new int[EDIM_X][EDIM_Y]; // Initialize the dataset. @@ -59,7 +60,7 @@ public class H5Ex_D_FillValue { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -92,7 +93,7 @@ public class H5Ex_D_FillValue { // Set the fill value for the dataset try { - int[] fill_value = { FILLVAL }; + int[] fill_value = {FILLVAL}; if (dcpl_id >= 0) H5.H5Pset_fill_value(dcpl_id, HDF5Constants.H5T_NATIVE_INT, fill_value); } @@ -115,7 +116,7 @@ public class H5Ex_D_FillValue { try { if ((file_id >= 0) && (dataspace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -124,8 +125,8 @@ public class H5Ex_D_FillValue { // Read values from the dataset, which has not been written to yet. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, read_dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, read_dset_data); } catch (Exception e) { e.printStackTrace(); @@ -144,8 +145,8 @@ public class H5Ex_D_FillValue { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, write_dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, write_dset_data); } catch (Exception e) { e.printStackTrace(); @@ -154,8 +155,8 @@ public class H5Ex_D_FillValue { // Read the data back. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, read_dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, read_dset_data); } catch (Exception e) { e.printStackTrace(); @@ -183,8 +184,8 @@ public class H5Ex_D_FillValue { // Read from the extended dataset. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, extend_dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, extend_dset_data); } catch (Exception e) { e.printStackTrace(); @@ -233,11 +234,7 @@ public class H5Ex_D_FillValue { catch (Exception e) { e.printStackTrace(); } - - } - - public static void main(String[] args) { - H5Ex_D_FillValue.fillValue(); } + public static void main(String[] args) { H5Ex_D_FillValue.fillValue(); } } diff --git a/java/examples/datasets/H5Ex_D_Gzip.java b/java/examples/datasets/H5Ex_D_Gzip.java index 404ff05..0a94254 100644 --- a/java/examples/datasets/H5Ex_D_Gzip.java +++ b/java/examples/datasets/H5Ex_D_Gzip.java @@ -29,45 +29,46 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Gzip { - private static String FILENAME = "H5Ex_D_Gzip.h5"; + private static String FILENAME = "H5Ex_D_Gzip.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkGzipFilter() { + private static boolean checkGzipFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_DEFLATE); if (available == 0) { @@ -81,8 +82,8 @@ public class H5Ex_D_Gzip { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_DEFLATE); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("gzip filter not available for encoding and decoding."); return false; } @@ -93,13 +94,14 @@ public class H5Ex_D_Gzip { return true; } - private static void writeGzip() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeGzip() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -110,7 +112,7 @@ public class H5Ex_D_Gzip { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -143,7 +145,7 @@ public class H5Ex_D_Gzip { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -152,8 +154,8 @@ public class H5Ex_D_Gzip { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -194,10 +196,11 @@ public class H5Ex_D_Gzip { } } - private static void readGzip() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readGzip() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -231,14 +234,14 @@ public class H5Ex_D_Gzip { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -272,8 +275,8 @@ public class H5Ex_D_Gzip { // Read the data using the default properties. try { if (dataset_id >= 0) { - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } } catch (Exception e) { @@ -318,7 +321,8 @@ public class H5Ex_D_Gzip { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if gzip compression is available and can be used for both // compression and decompression. Normally we do not perform error // checking in these examples for the sake of clarity, but in this @@ -329,5 +333,4 @@ public class H5Ex_D_Gzip { H5Ex_D_Gzip.readGzip(); } } - } diff --git a/java/examples/datasets/H5Ex_D_Hyperslab.java b/java/examples/datasets/H5Ex_D_Hyperslab.java index fa3473f..0575d50 100644 --- a/java/examples/datasets/H5Ex_D_Hyperslab.java +++ b/java/examples/datasets/H5Ex_D_Hyperslab.java @@ -26,17 +26,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Hyperslab { - private static String FILENAME = "H5Ex_D_Hyperslab.h5"; + private static String FILENAME = "H5Ex_D_Hyperslab.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 6; - private static final int DIM_Y = 8; - private static final int RANK = 2; + private static final int DIM_X = 6; + private static final int DIM_Y = 8; + private static final int RANK = 2; - private static void writeHyperslab() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeHyperslab() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data to "1", to make it easier to see the selections. @@ -57,7 +58,7 @@ public class H5Ex_D_Hyperslab { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -76,20 +77,22 @@ public class H5Ex_D_Hyperslab { try { if ((file_id >= 0) && (filespace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Define and select the first part of the hyperslab selection. - long[] start = { 0, 0 }; - long[] stride = { 3, 3 }; - long[] count = { 2, 3 }; - long[] block = { 2, 2 }; + long[] start = {0, 0}; + long[] stride = {3, 3}; + long[] count = {2, 3}; + long[] block = {2, 2}; try { if ((filespace_id >= 0)) - H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, block); + H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, + block); } catch (Exception e) { e.printStackTrace(); @@ -101,12 +104,13 @@ public class H5Ex_D_Hyperslab { block[1] = 1; try { if ((filespace_id >= 0)) { - H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_NOTB, start, stride, count, block); + H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_NOTB, start, stride, count, + block); // Write the data to the dataset. if (dataset_id >= 0) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, filespace_id, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } } catch (Exception e) { @@ -140,11 +144,12 @@ public class H5Ex_D_Hyperslab { } } - private static void readHyperslab() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void readHyperslab() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -167,8 +172,8 @@ public class H5Ex_D_Hyperslab { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -194,18 +199,19 @@ public class H5Ex_D_Hyperslab { if (dataset_id >= 0) { filespace_id = H5.H5Dget_space(dataset_id); - long[] start = { 0, 1 }; - long[] stride = { 4, 4 }; - long[] count = { 2, 2 }; - long[] block = { 2, 3 }; + long[] start = {0, 1}; + long[] stride = {4, 4}; + long[] count = {2, 2}; + long[] block = {2, 3}; if (filespace_id >= 0) { - H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, block); + H5.H5Sselect_hyperslab(filespace_id, HDF5Constants.H5S_SELECT_SET, start, stride, count, + block); // Read the data using the previously defined hyperslab. if ((dataset_id >= 0) && (filespace_id >= 0)) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, filespace_id, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + filespace_id, HDF5Constants.H5P_DEFAULT, dset_data); } } } @@ -258,9 +264,9 @@ public class H5Ex_D_Hyperslab { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_Hyperslab.writeHyperslab(); H5Ex_D_Hyperslab.readHyperslab(); } - } diff --git a/java/examples/datasets/H5Ex_D_Nbit.java b/java/examples/datasets/H5Ex_D_Nbit.java index 35d23a9..d54ce21 100644 --- a/java/examples/datasets/H5Ex_D_Nbit.java +++ b/java/examples/datasets/H5Ex_D_Nbit.java @@ -29,45 +29,46 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Nbit { - private static String FILENAME = "H5Ex_D_Nbit.h5"; + private static String FILENAME = "H5Ex_D_Nbit.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkNbitFilter() { + private static boolean checkNbitFilter() + { try { // Check if N-Bit compression is available and can be used for both compression and decompression. int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_NBIT); @@ -82,8 +83,8 @@ public class H5Ex_D_Nbit { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_NBIT); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("N-Bit filter not available for encoding and decoding."); return false; } @@ -94,14 +95,15 @@ public class H5Ex_D_Nbit { return true; } - private static void writeData() throws Exception { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeData() throws Exception + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dtype_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dtype_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -112,7 +114,7 @@ public class H5Ex_D_Nbit { try { // Create a new file using the default properties. file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); // Create dataspace. Setting maximum size to NULL sets the maximum // size to be the current size. @@ -130,12 +132,12 @@ public class H5Ex_D_Nbit { H5.H5Pset_chunk(dcpl_id, NDIMS, chunk_dims); // Create the dataset. - dataset_id = H5.H5Dcreate(file_id, DATASETNAME, dtype_id, filespace_id, HDF5Constants.H5P_DEFAULT, dcpl_id, - HDF5Constants.H5P_DEFAULT); + dataset_id = H5.H5Dcreate(file_id, DATASETNAME, dtype_id, filespace_id, HDF5Constants.H5P_DEFAULT, + dcpl_id, HDF5Constants.H5P_DEFAULT); // Write the data to the dataset. - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -155,10 +157,11 @@ public class H5Ex_D_Nbit { } } - private static void readData() throws Exception { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readData() throws Exception + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -192,14 +195,14 @@ public class H5Ex_D_Nbit { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -234,7 +237,7 @@ public class H5Ex_D_Nbit { try { if (dataset_id >= 0) { int status = H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, - HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); // Check if the read was successful. if (status < 0) System.out.print("Dataset read failed!"); @@ -280,14 +283,14 @@ public class H5Ex_D_Nbit { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { /* - * Check if N-Bit compression is available and can be used for both compression and decompression. Normally we - * do not perform error checking in these examples for the sake of clarity, but in this case we will make an - * exception because this filter is an optional part of the hdf5 library. + * Check if N-Bit compression is available and can be used for both compression and decompression. + * Normally we do not perform error checking in these examples for the sake of clarity, but in this + * case we will make an exception because this filter is an optional part of the hdf5 library. */ try { if (H5Ex_D_Nbit.checkNbitFilter()) { diff --git a/java/examples/datasets/H5Ex_D_ReadWrite.java b/java/examples/datasets/H5Ex_D_ReadWrite.java index db930d3..4b26a2c 100644 --- a/java/examples/datasets/H5Ex_D_ReadWrite.java +++ b/java/examples/datasets/H5Ex_D_ReadWrite.java @@ -24,17 +24,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_ReadWrite { - private static String FILENAME = "H5Ex_D_ReadWrite.h5"; + private static String FILENAME = "H5Ex_D_ReadWrite.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int RANK = 2; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int RANK = 2; - private static void WriteDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void WriteDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -45,7 +46,7 @@ public class H5Ex_D_ReadWrite { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -64,7 +65,8 @@ public class H5Ex_D_ReadWrite { try { if ((file_id >= 0) && (filespace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -73,8 +75,8 @@ public class H5Ex_D_ReadWrite { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -107,9 +109,10 @@ public class H5Ex_D_ReadWrite { } } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open file using the default properties. @@ -132,8 +135,8 @@ public class H5Ex_D_ReadWrite { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -168,9 +171,9 @@ public class H5Ex_D_ReadWrite { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_ReadWrite.WriteDataset(); H5Ex_D_ReadWrite.ReadDataset(); } - } diff --git a/java/examples/datasets/H5Ex_D_Shuffle.java b/java/examples/datasets/H5Ex_D_Shuffle.java index 1dd7c6a..54a77c7 100644 --- a/java/examples/datasets/H5Ex_D_Shuffle.java +++ b/java/examples/datasets/H5Ex_D_Shuffle.java @@ -30,45 +30,46 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Shuffle { - private static String FILENAME = "H5Ex_D_Shuffle.h5"; + private static String FILENAME = "H5Ex_D_Shuffle.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkGzipFilter() { + private static boolean checkGzipFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_DEFLATE); if (available == 0) { @@ -82,8 +83,8 @@ public class H5Ex_D_Shuffle { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_DEFLATE); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("gzip filter not available for encoding and decoding."); return false; } @@ -94,7 +95,8 @@ public class H5Ex_D_Shuffle { return true; } - private static boolean checkShuffleFilter() { + private static boolean checkShuffleFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SHUFFLE); if (available == 0) { @@ -108,8 +110,8 @@ public class H5Ex_D_Shuffle { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SHUFFLE); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("Shuffle filter not available for encoding and decoding."); return false; } @@ -120,13 +122,14 @@ public class H5Ex_D_Shuffle { return true; } - private static void writeShuffle() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeShuffle() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -137,7 +140,7 @@ public class H5Ex_D_Shuffle { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -176,7 +179,7 @@ public class H5Ex_D_Shuffle { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -185,8 +188,8 @@ public class H5Ex_D_Shuffle { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -227,10 +230,11 @@ public class H5Ex_D_Shuffle { } } - private static void readShuffle() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readShuffle() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -266,14 +270,14 @@ public class H5Ex_D_Shuffle { int nfilters = H5.H5Pget_nfilters(dcpl_id); for (int indx = 0; indx < nfilters; indx++) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - filter_type = H5.H5Pget_filter(dcpl_id, indx, flags, cd_nelmts, cd_values, 120, filter_name, - filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + filter_type = H5.H5Pget_filter(dcpl_id, indx, flags, cd_nelmts, cd_values, 120, + filter_name, filter_config); System.out.print("Filter " + indx + ": Type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -308,8 +312,8 @@ public class H5Ex_D_Shuffle { // Read the data using the default properties. try { if (dataset_id >= 0) { - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } } catch (Exception e) { @@ -354,7 +358,8 @@ public class H5Ex_D_Shuffle { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if gzip compression is available and can be used for both // compression and decompression. Normally we do not perform error // checking in these examples for the sake of clarity, but in this @@ -366,5 +371,4 @@ public class H5Ex_D_Shuffle { H5Ex_D_Shuffle.readShuffle(); } } - } diff --git a/java/examples/datasets/H5Ex_D_Sofloat.java b/java/examples/datasets/H5Ex_D_Sofloat.java index 8edde09..a5f5cd8 100644 --- a/java/examples/datasets/H5Ex_D_Sofloat.java +++ b/java/examples/datasets/H5Ex_D_Sofloat.java @@ -23,9 +23,9 @@ package examples.datasets; import java.text.DecimalFormat; import java.text.DecimalFormatSymbols; -import java.util.Locale; import java.util.EnumSet; import java.util.HashMap; +import java.util.Locale; import java.util.Map; import hdf.hdf5lib.H5; @@ -33,45 +33,46 @@ import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Sofloat { - private static String FILENAME = "H5Ex_D_Sofloat.h5"; + private static String FILENAME = "H5Ex_D_Sofloat.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkScaleoffsetFilter() { + private static boolean checkScaleoffsetFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SCALEOFFSET); if (available == 0) { @@ -85,8 +86,8 @@ public class H5Ex_D_Sofloat { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SCALEOFFSET); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("Scale-Offset filter not available for encoding and decoding."); return false; } @@ -97,20 +98,21 @@ public class H5Ex_D_Sofloat { return true; } - private static void writeData() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + private static void writeData() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long filespace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; double[][] dset_data = new double[DIM_X][DIM_Y]; // Initialize data. for (int indx = 0; indx < DIM_X; indx++) for (int jndx = 0; jndx < DIM_Y; jndx++) { - double x = indx; - double y = jndx; + double x = indx; + double y = jndx; dset_data[indx][jndx] = (x + 1) / (y + 0.3) + y; } @@ -133,7 +135,7 @@ public class H5Ex_D_Sofloat { // Create a new file using the default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -164,7 +166,7 @@ public class H5Ex_D_Sofloat { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_IEEE_F64LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -173,8 +175,8 @@ public class H5Ex_D_Sofloat { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -215,10 +217,11 @@ public class H5Ex_D_Sofloat { } } - private static void readData() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readData() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; double[][] dset_data = new double[DIM_X][DIM_Y]; // Open file using the default properties. @@ -251,15 +254,15 @@ public class H5Ex_D_Sofloat { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -293,8 +296,8 @@ public class H5Ex_D_Sofloat { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -343,7 +346,8 @@ public class H5Ex_D_Sofloat { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if Scale-Offset compression is available and can be used // for both compression and decompression. Normally we do not diff --git a/java/examples/datasets/H5Ex_D_Soint.java b/java/examples/datasets/H5Ex_D_Soint.java index dd7664f..3eb8e37 100644 --- a/java/examples/datasets/H5Ex_D_Soint.java +++ b/java/examples/datasets/H5Ex_D_Soint.java @@ -30,45 +30,46 @@ import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Soint { - private static String FILENAME = "H5Ex_D_Soint.h5"; + private static String FILENAME = "H5Ex_D_Soint.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkScaleoffsetFilter() { + private static boolean checkScaleoffsetFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SCALEOFFSET); if (available == 0) { @@ -82,8 +83,8 @@ public class H5Ex_D_Soint { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SCALEOFFSET); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("Scale-Offset filter not available for encoding and decoding."); return false; } @@ -94,13 +95,14 @@ public class H5Ex_D_Soint { return true; } - private static void writeData() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeData() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -111,7 +113,7 @@ public class H5Ex_D_Soint { // Create a new file using the default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -130,7 +132,8 @@ public class H5Ex_D_Soint { try { dcpl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE); if (dcpl_id >= 0) { - H5.H5Pset_scaleoffset(dcpl_id, HDF5Constants.H5Z_SO_INT, HDF5Constants.H5Z_SO_INT_MINBITS_DEFAULT); + H5.H5Pset_scaleoffset(dcpl_id, HDF5Constants.H5Z_SO_INT, + HDF5Constants.H5Z_SO_INT_MINBITS_DEFAULT); H5.H5Pset_chunk(dcpl_id, NDIMS, chunk_dims); } } @@ -142,7 +145,7 @@ public class H5Ex_D_Soint { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -151,8 +154,8 @@ public class H5Ex_D_Soint { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -193,10 +196,11 @@ public class H5Ex_D_Soint { } } - private static void readData() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readData() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open file using the default properties. @@ -229,15 +233,15 @@ public class H5Ex_D_Soint { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -271,8 +275,8 @@ public class H5Ex_D_Soint { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -316,7 +320,8 @@ public class H5Ex_D_Soint { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if Scale-Offset compression is available and can be used // for both compression and decompression. Normally we do not @@ -328,5 +333,4 @@ public class H5Ex_D_Soint { H5Ex_D_Soint.readData(); } } - } diff --git a/java/examples/datasets/H5Ex_D_Szip.java b/java/examples/datasets/H5Ex_D_Szip.java index 3fdc712..0426a87 100644 --- a/java/examples/datasets/H5Ex_D_Szip.java +++ b/java/examples/datasets/H5Ex_D_Szip.java @@ -29,45 +29,46 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Szip { - private static String FILENAME = "H5Ex_D_Szip.h5"; + private static String FILENAME = "H5Ex_D_Szip.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 32; - private static final int DIM_Y = 64; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 8; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 32; + private static final int DIM_Y = 64; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 8; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkSzipFilter() { + private static boolean checkSzipFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SZIP); if (available == 0) { @@ -81,8 +82,8 @@ public class H5Ex_D_Szip { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SZIP); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("szip filter not available for encoding and decoding."); return false; } @@ -93,13 +94,14 @@ public class H5Ex_D_Szip { return true; } - private static void writeSzip() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeSzip() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -110,7 +112,7 @@ public class H5Ex_D_Szip { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -143,7 +145,7 @@ public class H5Ex_D_Szip { try { if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -152,8 +154,8 @@ public class H5Ex_D_Szip { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -194,10 +196,11 @@ public class H5Ex_D_Szip { } } - private static void readSzip() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void readSzip() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file. @@ -231,15 +234,15 @@ public class H5Ex_D_Szip { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -273,8 +276,8 @@ public class H5Ex_D_Szip { // Read the data using the default properties. try { if (dataset_id >= 0) { - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } } catch (Exception e) { @@ -319,7 +322,8 @@ public class H5Ex_D_Szip { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if gzip compression is available and can be used for both // compression and decompression. Normally we do not perform error // checking in these examples for the sake of clarity, but in this @@ -330,5 +334,4 @@ public class H5Ex_D_Szip { H5Ex_D_Szip.readSzip(); } } - } diff --git a/java/examples/datasets/H5Ex_D_Transform.java b/java/examples/datasets/H5Ex_D_Transform.java index 069e80b..16ab423 100644 --- a/java/examples/datasets/H5Ex_D_Transform.java +++ b/java/examples/datasets/H5Ex_D_Transform.java @@ -27,20 +27,21 @@ import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_Transform { - private static String FILE = "H5Ex_D_Transform.h5"; - private static String DATASET = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static String TRANSFORM = "x+1"; + private static String FILE = "H5Ex_D_Transform.h5"; + private static String DATASET = "DS1"; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static String TRANSFORM = "x+1"; private static String RTRANSFORM = "x-1"; - private static void writeData() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void writeData() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filespace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dxpl_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dxpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize data. @@ -60,7 +61,7 @@ public class H5Ex_D_Transform { // Create a new file using the default properties. try { file_id = H5.H5Fcreate(FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -90,7 +91,8 @@ public class H5Ex_D_Transform { try { if ((file_id >= 0) && (filespace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASET, HDF5Constants.H5T_NATIVE_INT, filespace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -99,8 +101,8 @@ public class H5Ex_D_Transform { // Write the data to the dataset using the dataset transfer property list. try { if ((dataset_id >= 0) && (dxpl_id >= 0)) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - dxpl_id, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, dxpl_id, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -141,11 +143,12 @@ public class H5Ex_D_Transform { } } - private static void readData() { + private static void readData() + { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dxpl_id = HDF5Constants.H5I_INVALID_HID; + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dxpl_id = HDF5Constants.H5I_INVALID_HID; int[][] dset_data = new int[DIM_X][DIM_Y]; // Open an existing file using the default properties. @@ -168,8 +171,8 @@ public class H5Ex_D_Transform { // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -197,8 +200,8 @@ public class H5Ex_D_Transform { // Read the data using the dataset transfer property list. try { if ((dataset_id >= 0) && (dxpl_id >= 0)) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - dxpl_id, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, dxpl_id, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -206,8 +209,8 @@ public class H5Ex_D_Transform { // Output the data to the screen. - System.out.println("Data as written with transform '" + TRANSFORM + "' and read with transform '" - + RTRANSFORM + "'"); + System.out.println("Data as written with transform '" + TRANSFORM + "' and read with transform '" + + RTRANSFORM + "'"); for (int i = 0; i < DIM_X; i++) { System.out.print(" ["); for (int j = 0; j < DIM_Y; j++) @@ -239,9 +242,9 @@ public class H5Ex_D_Transform { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_Transform.writeData(); H5Ex_D_Transform.readData(); } - } diff --git a/java/examples/datasets/H5Ex_D_UnlimitedAdd.java b/java/examples/datasets/H5Ex_D_UnlimitedAdd.java index c82b2d6..4154cf3 100644 --- a/java/examples/datasets/H5Ex_D_UnlimitedAdd.java +++ b/java/examples/datasets/H5Ex_D_UnlimitedAdd.java @@ -26,25 +26,26 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_UnlimitedAdd { - private static String FILENAME = "H5Ex_D_UnlimitedAdd.h5"; + private static String FILENAME = "H5Ex_D_UnlimitedAdd.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int EDIM_X = 6; - private static final int EDIM_Y = 10; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 4; - private static final int RANK = 2; - private static final int NDIMS = 2; - - private static void writeUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int EDIM_X = 6; + private static final int EDIM_Y = 10; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 4; + private static final int RANK = 2; + private static final int NDIMS = 2; + + private static void writeUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; - long[] maxdims = { HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; + long[] maxdims = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize the dataset. @@ -55,7 +56,7 @@ public class H5Ex_D_UnlimitedAdd { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -90,7 +91,7 @@ public class H5Ex_D_UnlimitedAdd { try { if ((file_id >= 0) && (dataspace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -99,8 +100,8 @@ public class H5Ex_D_UnlimitedAdd { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -141,14 +142,15 @@ public class H5Ex_D_UnlimitedAdd { } } - private static void extendUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void extendUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] extdims = { EDIM_X, EDIM_Y }; - long[] start = { 0, 0 }; - long[] count = new long[2]; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] extdims = {EDIM_X, EDIM_Y}; + long[] start = {0, 0}; + long[] count = new long[2]; int[][] dset_data; int[][] extend_dset_data = new int[EDIM_X][EDIM_Y]; @@ -189,13 +191,13 @@ public class H5Ex_D_UnlimitedAdd { } // Allocate array of pointers to rows. - dset_data = new int[(int) dims[0]][(int) dims[1]]; + dset_data = new int[(int)dims[0]][(int)dims[1]]; // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -257,7 +259,7 @@ public class H5Ex_D_UnlimitedAdd { // Write the data to the selected portion of the dataset. if (dataset_id >= 0) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, dataspace_id, - HDF5Constants.H5P_DEFAULT, extend_dset_data); + HDF5Constants.H5P_DEFAULT, extend_dset_data); } } catch (Exception e) { @@ -291,11 +293,12 @@ public class H5Ex_D_UnlimitedAdd { } } - private static void readUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void readUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data; // Open an existing file. @@ -332,13 +335,13 @@ public class H5Ex_D_UnlimitedAdd { e.printStackTrace(); } // Allocate array of pointers to rows. - dset_data = new int[(int) dims[0]][(int) dims[1]]; + dset_data = new int[(int)dims[0]][(int)dims[1]]; // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -381,10 +384,10 @@ public class H5Ex_D_UnlimitedAdd { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_UnlimitedAdd.writeUnlimited(); H5Ex_D_UnlimitedAdd.extendUnlimited(); H5Ex_D_UnlimitedAdd.readUnlimited(); } - } diff --git a/java/examples/datasets/H5Ex_D_UnlimitedGzip.java b/java/examples/datasets/H5Ex_D_UnlimitedGzip.java index 675b1ba..e084641 100644 --- a/java/examples/datasets/H5Ex_D_UnlimitedGzip.java +++ b/java/examples/datasets/H5Ex_D_UnlimitedGzip.java @@ -31,47 +31,48 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_UnlimitedGzip { - private static String FILENAME = "H5Ex_D_UnlimitedGzip.h5"; + private static String FILENAME = "H5Ex_D_UnlimitedGzip.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int EDIM_X = 6; - private static final int EDIM_Y = 10; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 4; - private static final int RANK = 2; - private static final int NDIMS = 2; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int EDIM_X = 6; + private static final int EDIM_Y = 10; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 4; + private static final int RANK = 2; + private static final int NDIMS = 2; // Values for the status of space allocation enum H5Z_filter { - H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE( - HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32( - HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT( - HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED( - HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); + H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), + H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), + H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE), + H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), + H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32), + H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), + H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT), + H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), + H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED), + H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX); private static final Map lookup = new HashMap(); - static { + static + { for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class)) lookup.put(s.getCode(), s); } private int code; - H5Z_filter(int layout_type) { - this.code = layout_type; - } + H5Z_filter(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5Z_filter get(int code) { - return lookup.get(code); - } + public static H5Z_filter get(int code) { return lookup.get(code); } } - private static boolean checkGzipFilter() { + private static boolean checkGzipFilter() + { try { int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_DEFLATE); if (available == 0) { @@ -85,8 +86,8 @@ public class H5Ex_D_UnlimitedGzip { try { int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_DEFLATE); - if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) - || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { + if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) || + ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) { System.out.println("gzip filter not available for encoding and decoding."); return false; } @@ -97,14 +98,15 @@ public class H5Ex_D_UnlimitedGzip { return true; } - private static void writeUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static void writeUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; - long[] maxdims = { HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; + long[] maxdims = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize the dataset. @@ -115,7 +117,7 @@ public class H5Ex_D_UnlimitedGzip { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -147,7 +149,7 @@ public class H5Ex_D_UnlimitedGzip { try { if ((file_id >= 0) && (dataspace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -156,8 +158,8 @@ public class H5Ex_D_UnlimitedGzip { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -198,14 +200,15 @@ public class H5Ex_D_UnlimitedGzip { } } - private static void extendUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void extendUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] extdims = { EDIM_X, EDIM_Y }; - long[] start = { 0, 0 }; - long[] count = new long[2]; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] extdims = {EDIM_X, EDIM_Y}; + long[] start = {0, 0}; + long[] count = new long[2]; int[][] dset_data; int[][] extend_dset_data = new int[EDIM_X][EDIM_Y]; @@ -246,13 +249,13 @@ public class H5Ex_D_UnlimitedGzip { } // Allocate array of pointers to rows. - dset_data = new int[(int) dims[0]][(int) dims[1]]; + dset_data = new int[(int)dims[0]][(int)dims[1]]; // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -314,7 +317,7 @@ public class H5Ex_D_UnlimitedGzip { // Write the data to the selected portion of the dataset. if (dataset_id >= 0) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, dataspace_id, - HDF5Constants.H5P_DEFAULT, extend_dset_data); + HDF5Constants.H5P_DEFAULT, extend_dset_data); } } catch (Exception e) { @@ -348,12 +351,13 @@ public class H5Ex_D_UnlimitedGzip { } } - private static void readUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void readUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data; // Open an existing file. @@ -387,14 +391,14 @@ public class H5Ex_D_UnlimitedGzip { try { if (dcpl_id >= 0) { // Java lib requires a valid filter_name object and cd_values - int[] flags = { 0 }; - long[] cd_nelmts = { 1 }; - int[] cd_values = { 0 }; - String[] filter_name = { "" }; - int[] filter_config = { 0 }; - int filter_type = -1; - filter_type = H5 - .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config); + int[] flags = {0}; + long[] cd_nelmts = {1}; + int[] cd_values = {0}; + String[] filter_name = {""}; + int[] filter_config = {0}; + int filter_type = -1; + filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, + filter_config); System.out.print("Filter type is: "); switch (H5Z_filter.get(filter_type)) { case H5Z_FILTER_DEFLATE: @@ -436,13 +440,13 @@ public class H5Ex_D_UnlimitedGzip { e.printStackTrace(); } // Allocate array of pointers to rows. - dset_data = new int[(int) dims[0]][(int) dims[1]]; + dset_data = new int[(int)dims[0]][(int)dims[1]]; // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -485,7 +489,8 @@ public class H5Ex_D_UnlimitedGzip { } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if gzip compression is available and can be used for both // compression and decompression. Normally we do not perform error // checking in these examples for the sake of clarity, but in this @@ -497,5 +502,4 @@ public class H5Ex_D_UnlimitedGzip { H5Ex_D_UnlimitedGzip.readUnlimited(); } } - } diff --git a/java/examples/datasets/H5Ex_D_UnlimitedMod.java b/java/examples/datasets/H5Ex_D_UnlimitedMod.java index 0708898..ccabcdd 100644 --- a/java/examples/datasets/H5Ex_D_UnlimitedMod.java +++ b/java/examples/datasets/H5Ex_D_UnlimitedMod.java @@ -26,25 +26,26 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_D_UnlimitedMod { - private static String FILENAME = "H5Ex_D_UnlimitedMod.h5"; + private static String FILENAME = "H5Ex_D_UnlimitedMod.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM_X = 4; - private static final int DIM_Y = 7; - private static final int EDIM_X = 6; - private static final int EDIM_Y = 10; - private static final int CHUNK_X = 4; - private static final int CHUNK_Y = 4; - private static final int RANK = 2; - private static final int NDIMS = 2; - - private static void writeUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dcpl_id = HDF5Constants.H5I_INVALID_HID; + private static final int DIM_X = 4; + private static final int DIM_Y = 7; + private static final int EDIM_X = 6; + private static final int EDIM_Y = 10; + private static final int CHUNK_X = 4; + private static final int CHUNK_Y = 4; + private static final int RANK = 2; + private static final int NDIMS = 2; + + private static void writeUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dcpl_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] chunk_dims = { CHUNK_X, CHUNK_Y }; - long[] maxdims = { HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] chunk_dims = {CHUNK_X, CHUNK_Y}; + long[] maxdims = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize the dataset. @@ -55,7 +56,7 @@ public class H5Ex_D_UnlimitedMod { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -90,7 +91,7 @@ public class H5Ex_D_UnlimitedMod { try { if ((file_id >= 0) && (dataspace_id >= 0) && (dcpl_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -99,8 +100,8 @@ public class H5Ex_D_UnlimitedMod { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -141,12 +142,13 @@ public class H5Ex_D_UnlimitedMod { } } - private static void extendUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void extendUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; - long[] extdims = { EDIM_X, EDIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; + long[] extdims = {EDIM_X, EDIM_Y}; int[][] dset_data; int[][] extend_dset_data = new int[EDIM_X][EDIM_Y]; @@ -187,13 +189,13 @@ public class H5Ex_D_UnlimitedMod { } // Allocate array of pointers to rows. - dset_data = new int[(int) dims[0]][(int) dims[1]]; + dset_data = new int[(int)dims[0]][(int)dims[1]]; // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -244,7 +246,7 @@ public class H5Ex_D_UnlimitedMod { try { if ((dataspace_id >= 0) && (dataset_id >= 0)) H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, dataspace_id, - HDF5Constants.H5P_DEFAULT, extend_dset_data); + HDF5Constants.H5P_DEFAULT, extend_dset_data); } catch (Exception e) { e.printStackTrace(); @@ -277,11 +279,12 @@ public class H5Ex_D_UnlimitedMod { } } - private static void readUnlimited() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void readUnlimited() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data; // Open an existing file. @@ -318,13 +321,13 @@ public class H5Ex_D_UnlimitedMod { e.printStackTrace(); } // Allocate array of pointers to rows. - dset_data = new int[(int) dims[0]][(int) dims[1]]; + dset_data = new int[(int)dims[0]][(int)dims[1]]; // Read the data using the default properties. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -367,10 +370,10 @@ public class H5Ex_D_UnlimitedMod { } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_D_UnlimitedMod.writeUnlimited(); H5Ex_D_UnlimitedMod.extendUnlimited(); H5Ex_D_UnlimitedMod.readUnlimited(); } - } diff --git a/java/examples/datasets/JavaDatasetExample.sh.in b/java/examples/datasets/JavaDatasetExample.sh.in index 9a5ddd8..b299ff2 100644 --- a/java/examples/datasets/JavaDatasetExample.sh.in +++ b/java/examples/datasets/JavaDatasetExample.sh.in @@ -29,6 +29,7 @@ CMP='cmp' DIFF='diff -c' CP='cp' DIRNAME='dirname' +BASENAME='basename' LS='ls' AWK='awk' @@ -103,17 +104,21 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." # Comment out this to CREATE expected file exit $EXIT_FAILURE fi + BNAME=`$BASENAME $tstfile` + if [ "$BNAME" = "libhdf5_java.dylib" ]; then + COPIED_LIBHDF5_JAVA=1 + fi fi fi done - if [ "$IS_DARWIN" = "yes" ]; then + if [[ "$IS_DARWIN" = "yes" ]] && [[ $COPIED_LIBHDF5_JAVA -eq 1 ]]; then (cd $BLDLIBDIR; \ install_name_tool -add_rpath @loader_path libhdf5_java.dylib; \ exist_path=` otool -l libhdf5_java.dylib | grep libhdf5 | grep -v java | awk '{print $2}'`; \ @@ -134,7 +139,7 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." @@ -155,10 +160,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - for tstfile in $COPY_JARTESTFILES - do - $RM $BLDLIBDIR/tstfile - done + $RM -rf $BLDLIBDIR fi } diff --git a/java/examples/datatypes/CMakeLists.txt b/java/examples/datatypes/CMakeLists.txt index 6997b2e..4512221 100644 --- a/java/examples/datatypes/CMakeLists.txt +++ b/java/examples/datatypes/CMakeLists.txt @@ -47,6 +47,13 @@ foreach (example ${HDF_JAVA_EXAMPLES}) # install_jar (${example} ${HJAVA_INSTALL_DATA_DIR}/examples examples) get_target_property (${example}_CLASSPATH ${example} CLASSDIR) add_dependencies (${example} ${HDF5_JAVA_HDF5_LIB_TARGET}) + + #----------------------------------------------------------------------------- + # Add Target to clang-format + #----------------------------------------------------------------------------- + if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_JAVA_${example}_SRC_FORMAT ${example}.java) + endif () endforeach () set (CMAKE_JAVA_INCLUDE_PATH "${HDF5_JAVA_JARS};${HDF5_JAVA_LOGGING_JAR};${HDF5_JAVA_LOGGING_NOP_JAR}") diff --git a/java/examples/datatypes/H5Ex_T_Array.java b/java/examples/datatypes/H5Ex_T_Array.java index 3939b38..4e9de2a 100644 --- a/java/examples/datatypes/H5Ex_T_Array.java +++ b/java/examples/datatypes/H5Ex_T_Array.java @@ -24,22 +24,23 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_Array { - private static String FILENAME = "H5Ex_T_Array.h5"; + private static String FILENAME = "H5Ex_T_Array.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int ADIM0 = 3; - private static final int ADIM1 = 5; - private static final int RANK = 1; - private static final int NDIMS = 2; - - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - long[] adims = { ADIM0, ADIM1 }; + private static final int DIM0 = 4; + private static final int ADIM0 = 3; + private static final int ADIM1 = 5; + private static final int RANK = 1; + private static final int NDIMS = 2; + + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; + long[] adims = {ADIM0, ADIM1}; int[][][] dset_data = new int[DIM0][ADIM0][ADIM1]; // Initialize data. indx is the element in the dataspace, jndx and kndx the @@ -52,7 +53,7 @@ public class H5Ex_T_Array { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -86,8 +87,9 @@ public class H5Ex_T_Array { // Create the dataset. try { if ((file_id >= 0) && (dataspace_id >= 0) && (filetype_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, DATASETNAME, filetype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = + H5.H5Dcreate(file_id, DATASETNAME, filetype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -97,7 +99,7 @@ public class H5Ex_T_Array { try { if ((dataset_id >= 0) && (memtype_id >= 0)) H5.H5Dwrite(dataset_id, memtype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -147,16 +149,16 @@ public class H5Ex_T_Array { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long filetype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - long[] adims = { ADIM0, ADIM1 }; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; + long[] adims = {ADIM0, ADIM1}; int[][][] dset_data; // Open an existing file. @@ -196,7 +198,7 @@ public class H5Ex_T_Array { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new int[(int) dims[0]][(int) (adims[0])][(int) (adims[1])]; + dset_data = new int[(int)dims[0]][(int)(adims[0])][(int)(adims[1])]; // Create array datatypes for memory. try { @@ -210,7 +212,7 @@ public class H5Ex_T_Array { try { if ((dataset_id >= 0) && (memtype_id >= 0)) H5.H5Dread(dataset_id, memtype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -264,10 +266,10 @@ public class H5Ex_T_Array { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Array.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -275,5 +277,4 @@ public class H5Ex_T_Array { // data using malloc(). H5Ex_T_Array.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_ArrayAttribute.java b/java/examples/datatypes/H5Ex_T_ArrayAttribute.java index c4c4bc4..45b44c1 100644 --- a/java/examples/datatypes/H5Ex_T_ArrayAttribute.java +++ b/java/examples/datatypes/H5Ex_T_ArrayAttribute.java @@ -24,24 +24,25 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_ArrayAttribute { - private static String FILENAME = "H5Ex_T_ArrayAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_ArrayAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int ADIM0 = 3; - private static final int ADIM1 = 5; - private static final int RANK = 1; - private static final int NDIMS = 2; - - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - long[] adims = { ADIM0, ADIM1 }; + private static final int DIM0 = 4; + private static final int ADIM0 = 3; + private static final int ADIM1 = 5; + private static final int RANK = 1; + private static final int NDIMS = 2; + + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long attribute_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; + long[] adims = {ADIM0, ADIM1}; int[][][] dset_data = new int[DIM0][ADIM0][ADIM1]; // Initialize data. indx is the element in the dataspace, jndx and kndx the @@ -54,7 +55,7 @@ public class H5Ex_T_ArrayAttribute { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -81,7 +82,8 @@ public class H5Ex_T_ArrayAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -103,7 +105,7 @@ public class H5Ex_T_ArrayAttribute { try { if ((dataset_id >= 0) && (dataspace_id >= 0) && (filetype_id >= 0)) attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, filetype_id, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -170,17 +172,17 @@ public class H5Ex_T_ArrayAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - long[] adims = { ADIM0, ADIM1 }; + long[] dims = {DIM0}; + long[] adims = {ADIM0, ADIM1}; int[][][] dset_data; // Open an existing file. @@ -203,7 +205,7 @@ public class H5Ex_T_ArrayAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -229,7 +231,7 @@ public class H5Ex_T_ArrayAttribute { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new int[(int) dims[0]][(int) (adims[0])][(int) (adims[1])]; + dset_data = new int[(int)dims[0]][(int)(adims[0])][(int)(adims[1])]; // Create array datatypes for memory. try { @@ -304,10 +306,10 @@ public class H5Ex_T_ArrayAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_ArrayAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -315,5 +317,4 @@ public class H5Ex_T_ArrayAttribute { // data using malloc(). H5Ex_T_ArrayAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_Bit.java b/java/examples/datatypes/H5Ex_T_Bit.java index 45d4e8a..6d1a253 100644 --- a/java/examples/datatypes/H5Ex_T_Bit.java +++ b/java/examples/datatypes/H5Ex_T_Bit.java @@ -24,17 +24,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_Bit { - private static String FILENAME = "H5Ex_T_Bit.h5"; + private static String FILENAME = "H5Ex_T_Bit.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int DIM1 = 7; - private static final int RANK = 2; + private static final int DIM0 = 4; + private static final int DIM1 = 7; + private static final int RANK = 2; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; int[][] dset_data = new int[DIM0][DIM1]; // Initialize data. @@ -42,15 +43,15 @@ public class H5Ex_T_Bit { for (int jndx = 0; jndx < DIM1; jndx++) { dset_data[indx][jndx] = 0; dset_data[indx][jndx] |= (indx * jndx - jndx) & 0x03; /* Field "A" */ - dset_data[indx][jndx] |= (indx & 0x03) << 2; /* Field "B" */ - dset_data[indx][jndx] |= (jndx & 0x03) << 4; /* Field "C" */ + dset_data[indx][jndx] |= (indx & 0x03) << 2; /* Field "B" */ + dset_data[indx][jndx] |= (jndx & 0x03) << 4; /* Field "C" */ dset_data[indx][jndx] |= ((indx + jndx) & 0x03) << 6; /* Field "D" */ } // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -69,7 +70,8 @@ public class H5Ex_T_Bit { try { if ((file_id >= 0) && (dataspace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_B8BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -78,8 +80,8 @@ public class H5Ex_T_Bit { // Write the bitfield data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_B8, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_B8, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -111,14 +113,14 @@ public class H5Ex_T_Bit { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; int[][] dset_data; // Open an existing file. @@ -157,13 +159,13 @@ public class H5Ex_T_Bit { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new int[(int) dims[0]][(int) (dims[1])]; + dset_data = new int[(int)dims[0]][(int)(dims[1])]; // Read data. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_B8, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_B8, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -209,10 +211,10 @@ public class H5Ex_T_Bit { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Bit.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -220,5 +222,4 @@ public class H5Ex_T_Bit { // data using malloc(). H5Ex_T_Bit.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_BitAttribute.java b/java/examples/datatypes/H5Ex_T_BitAttribute.java index 9b33ca5..3ad643a 100644 --- a/java/examples/datatypes/H5Ex_T_BitAttribute.java +++ b/java/examples/datatypes/H5Ex_T_BitAttribute.java @@ -24,19 +24,20 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_BitAttribute { - private static String FILENAME = "H5Ex_T_BitAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_BitAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int DIM1 = 7; - private static final int RANK = 2; + private static final int DIM0 = 4; + private static final int DIM1 = 7; + private static final int RANK = 2; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long[] dims = {DIM0, DIM1}; int[][] dset_data = new int[DIM0][DIM1]; // Initialize data. @@ -44,15 +45,15 @@ public class H5Ex_T_BitAttribute { for (int jndx = 0; jndx < DIM1; jndx++) { dset_data[indx][jndx] = 0; dset_data[indx][jndx] |= (indx * jndx - jndx) & 0x03; /* Field "A" */ - dset_data[indx][jndx] |= (indx & 0x03) << 2; /* Field "B" */ - dset_data[indx][jndx] |= (jndx & 0x03) << 4; /* Field "C" */ + dset_data[indx][jndx] |= (indx & 0x03) << 2; /* Field "B" */ + dset_data[indx][jndx] |= (jndx & 0x03) << 4; /* Field "C" */ dset_data[indx][jndx] |= ((indx + jndx) & 0x03) << 6; /* Field "D" */ } // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -63,7 +64,8 @@ public class H5Ex_T_BitAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -84,8 +86,9 @@ public class H5Ex_T_BitAttribute { // Create the attribute and write the array data to it. try { if ((dataset_id >= 0) && (dataspace_id >= 0)) - attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_STD_B8BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + attribute_id = + H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_STD_B8BE, dataspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -134,15 +137,15 @@ public class H5Ex_T_BitAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long[] dims = {DIM0, DIM1}; int[][] dset_data; // Open an existing file. @@ -165,7 +168,7 @@ public class H5Ex_T_BitAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -190,7 +193,7 @@ public class H5Ex_T_BitAttribute { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new int[(int) dims[0]][(int) (dims[1])]; + dset_data = new int[(int)dims[0]][(int)(dims[1])]; // Read data. try { @@ -249,10 +252,10 @@ public class H5Ex_T_BitAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_BitAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -260,5 +263,4 @@ public class H5Ex_T_BitAttribute { // data using malloc(). H5Ex_T_BitAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_Commit.java b/java/examples/datatypes/H5Ex_T_Commit.java index 62db5ea..44586ef 100644 --- a/java/examples/datatypes/H5Ex_T_Commit.java +++ b/java/examples/datatypes/H5Ex_T_Commit.java @@ -21,77 +21,74 @@ package examples.datatypes; -import hdf.hdf5lib.H5; -import hdf.hdf5lib.HDF5Constants; - import java.util.EnumSet; import java.util.HashMap; import java.util.Map; +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; + public class H5Ex_T_Commit { - private static String FILENAME = "H5Ex_T_Commit.h5"; - private static String DATATYPENAME = "Sensor_Type"; - protected static final int INTEGERSIZE = 4; - protected static final int DOUBLESIZE = 8; + private static String FILENAME = "H5Ex_T_Commit.h5"; + private static String DATATYPENAME = "Sensor_Type"; + protected static final int INTEGERSIZE = 4; + protected static final int DOUBLESIZE = 8; protected final static int MAXSTRINGSIZE = 80; // Values for the various classes of datatypes enum H5T_class { - H5T_NO_CLASS(HDF5Constants.H5T_NO_CLASS), // error - H5T_INTEGER(HDF5Constants.H5T_INTEGER), // integer types - H5T_FLOAT(HDF5Constants.H5T_FLOAT), // floating-point types - H5T_TIME(HDF5Constants.H5T_TIME), // date and time types - H5T_STRING(HDF5Constants.H5T_STRING), // character string types - H5T_BITFIELD(HDF5Constants.H5T_BITFIELD), // bit field types - H5T_OPAQUE(HDF5Constants.H5T_OPAQUE), // opaque types - H5T_COMPOUND(HDF5Constants.H5T_COMPOUND), // compound types + H5T_NO_CLASS(HDF5Constants.H5T_NO_CLASS), // error + H5T_INTEGER(HDF5Constants.H5T_INTEGER), // integer types + H5T_FLOAT(HDF5Constants.H5T_FLOAT), // floating-point types + H5T_TIME(HDF5Constants.H5T_TIME), // date and time types + H5T_STRING(HDF5Constants.H5T_STRING), // character string types + H5T_BITFIELD(HDF5Constants.H5T_BITFIELD), // bit field types + H5T_OPAQUE(HDF5Constants.H5T_OPAQUE), // opaque types + H5T_COMPOUND(HDF5Constants.H5T_COMPOUND), // compound types H5T_REFERENCE(HDF5Constants.H5T_REFERENCE), // reference types - H5T_ENUM(HDF5Constants.H5T_ENUM), // enumeration types - H5T_VLEN(HDF5Constants.H5T_VLEN), // Variable-Length types - H5T_ARRAY(HDF5Constants.H5T_ARRAY), // Array types - H5T_NCLASSES(11); // this must be last + H5T_ENUM(HDF5Constants.H5T_ENUM), // enumeration types + H5T_VLEN(HDF5Constants.H5T_VLEN), // Variable-Length types + H5T_ARRAY(HDF5Constants.H5T_ARRAY), // Array types + H5T_NCLASSES(11); // this must be last private static final Map lookup = new HashMap(); - static { + static + { for (H5T_class s : EnumSet.allOf(H5T_class.class)) lookup.put(s.getCode(), s); } private long code; - H5T_class(long layout_type) { - this.code = layout_type; - } + H5T_class(long layout_type) { this.code = layout_type; } - public long getCode() { - return this.code; - } + public long getCode() { return this.code; } - public static H5T_class get(long typeclass_id) { - return lookup.get(typeclass_id); - } + public static H5T_class get(long typeclass_id) { return lookup.get(typeclass_id); } } // The supporting Sensor_Datatype class. private static class Sensor_Datatype { static int numberMembers = 4; - static int[] memberDims = { 1, 1, 1, 1 }; + static int[] memberDims = {1, 1, 1, 1}; - String[] memberNames = { "Serial number", "Location", "Temperature (F)", "Pressure (inHg)" }; - long[] memberFileTypes = { HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1, HDF5Constants.H5T_IEEE_F64BE, - HDF5Constants.H5T_IEEE_F64BE }; - static int[] memberStorage = { INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE }; + String[] memberNames = {"Serial number", "Location", "Temperature (F)", "Pressure (inHg)"}; + long[] memberFileTypes = {HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1, + HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE}; + static int[] memberStorage = {INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE}; // Data size is the storage size for the members not the object. - static long getDataSize() { + static long getDataSize() + { long data_size = 0; for (int indx = 0; indx < numberMembers; indx++) data_size += memberStorage[indx] * memberDims[indx]; return data_size; } - static int getOffset(int memberItem) { + static int getOffset(int memberItem) + { int data_offset = 0; for (int indx = 0; indx < memberItem; indx++) data_offset += memberStorage[indx]; @@ -99,15 +96,16 @@ public class H5Ex_T_Commit { } } - private static void CreateDataType() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long strtype_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataType() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long strtype_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; Sensor_Datatype datatypes = new Sensor_Datatype(); // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -134,7 +132,8 @@ public class H5Ex_T_Commit { long type_id = datatypes.memberFileTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(filetype_id, datatypes.memberNames[indx], Sensor_Datatype.getOffset(indx), type_id); + H5.H5Tinsert(filetype_id, datatypes.memberNames[indx], Sensor_Datatype.getOffset(indx), + type_id); } } } @@ -145,8 +144,8 @@ public class H5Ex_T_Commit { // Commit the compound datatype to the file, creating a named datatype. try { if ((file_id >= 0) && (filetype_id >= 0)) - H5.H5Tcommit(file_id, DATATYPENAME, filetype_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + H5.H5Tcommit(file_id, DATATYPENAME, filetype_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -178,13 +177,13 @@ public class H5Ex_T_Commit { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataType() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataType() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long typeclass_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; // Open an existing file. try { @@ -247,10 +246,10 @@ public class H5Ex_T_Commit { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Commit.CreateDataType(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -258,5 +257,4 @@ public class H5Ex_T_Commit { // data using malloc(). H5Ex_T_Commit.ReadDataType(); } - } diff --git a/java/examples/datatypes/H5Ex_T_Compound.java b/java/examples/datatypes/H5Ex_T_Compound.java index 8c83ebb..a78d0e3 100644 --- a/java/examples/datatypes/H5Ex_T_Compound.java +++ b/java/examples/datatypes/H5Ex_T_Compound.java @@ -20,49 +20,52 @@ package examples.datatypes; -import hdf.hdf5lib.H5; -import hdf.hdf5lib.HDF5Constants; - import java.nio.ByteBuffer; import java.nio.ByteOrder; import java.nio.charset.Charset; +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; + public class H5Ex_T_Compound { - private static String FILENAME = "H5Ex_T_Compound.h5"; - private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int RANK = 1; - protected static final int INTEGERSIZE = 4; - protected static final int DOUBLESIZE = 8; + private static String FILENAME = "H5Ex_T_Compound.h5"; + private static String DATASETNAME = "DS1"; + private static final int DIM0 = 4; + private static final int RANK = 1; + protected static final int INTEGERSIZE = 4; + protected static final int DOUBLESIZE = 8; protected final static int MAXSTRINGSIZE = 80; static class Sensor_Datatype { static int numberMembers = 4; - static int[] memberDims = { 1, 1, 1, 1 }; + static int[] memberDims = {1, 1, 1, 1}; - static String[] memberNames = { "Serial number", "Location", "Temperature (F)", "Pressure (inHg)" }; - static long[] memberMemTypes = { HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5T_C_S1, - HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE }; - static long[] memberFileTypes = { HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1, - HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE }; - static int[] memberStorage = { INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE }; + static String[] memberNames = {"Serial number", "Location", "Temperature (F)", "Pressure (inHg)"}; + static long[] memberMemTypes = {HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5T_C_S1, + HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE}; + static long[] memberFileTypes = {HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1, + HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE}; + static int[] memberStorage = {INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE}; // Data size is the storage size for the members. - static long getTotalDataSize() { + static long getTotalDataSize() + { long data_size = 0; for (int indx = 0; indx < numberMembers; indx++) data_size += memberStorage[indx] * memberDims[indx]; return DIM0 * data_size; } - static long getDataSize() { + static long getDataSize() + { long data_size = 0; for (int indx = 0; indx < numberMembers; indx++) data_size += memberStorage[indx] * memberDims[indx]; return data_size; } - static int getOffset(int memberItem) { + static int getOffset(int memberItem) + { int data_offset = 0; for (int indx = 0; indx < memberItem; indx++) data_offset += memberStorage[indx]; @@ -76,60 +79,63 @@ public class H5Ex_T_Compound { public double temperature; public double pressure; - Sensor(int serial_no, String location, double temperature, double pressure) { - this.serial_no = serial_no; - this.location = location; + Sensor(int serial_no, String location, double temperature, double pressure) + { + this.serial_no = serial_no; + this.location = location; this.temperature = temperature; - this.pressure = pressure; + this.pressure = pressure; } - Sensor(ByteBuffer databuf, int dbposition) { - readBuffer(databuf, dbposition); - } + Sensor(ByteBuffer databuf, int dbposition) { readBuffer(databuf, dbposition); } - void writeBuffer(ByteBuffer databuf, int dbposition) { + void writeBuffer(ByteBuffer databuf, int dbposition) + { databuf.putInt(dbposition + Sensor_Datatype.getOffset(0), serial_no); byte[] temp_str = location.getBytes(Charset.forName("UTF-8")); - int arraylen = (temp_str.length > MAXSTRINGSIZE) ? MAXSTRINGSIZE : temp_str.length; + int arraylen = (temp_str.length > MAXSTRINGSIZE) ? MAXSTRINGSIZE : temp_str.length; for (int ndx = 0; ndx < arraylen; ndx++) databuf.put(dbposition + Sensor_Datatype.getOffset(1) + ndx, temp_str[ndx]); for (int ndx = arraylen; ndx < MAXSTRINGSIZE; ndx++) - databuf.put(dbposition + Sensor_Datatype.getOffset(1) + arraylen, (byte) 0); + databuf.put(dbposition + Sensor_Datatype.getOffset(1) + arraylen, (byte)0); databuf.putDouble(dbposition + Sensor_Datatype.getOffset(2), temperature); databuf.putDouble(dbposition + Sensor_Datatype.getOffset(3), pressure); } - void readBuffer(ByteBuffer databuf, int dbposition) { - this.serial_no = databuf.getInt(dbposition + Sensor_Datatype.getOffset(0)); + void readBuffer(ByteBuffer databuf, int dbposition) + { + this.serial_no = databuf.getInt(dbposition + Sensor_Datatype.getOffset(0)); ByteBuffer stringbuf = databuf.duplicate(); stringbuf.position(dbposition + Sensor_Datatype.getOffset(1)); stringbuf.limit(dbposition + Sensor_Datatype.getOffset(1) + MAXSTRINGSIZE); byte[] bytearr = new byte[stringbuf.remaining()]; stringbuf.get(bytearr); - this.location = new String(bytearr, Charset.forName("UTF-8")).trim(); + this.location = new String(bytearr, Charset.forName("UTF-8")).trim(); this.temperature = databuf.getDouble(dbposition + Sensor_Datatype.getOffset(2)); - this.pressure = databuf.getDouble(dbposition + Sensor_Datatype.getOffset(3)); + this.pressure = databuf.getDouble(dbposition + Sensor_Datatype.getOffset(3)); } @Override - public String toString() { - return String.format("Serial number : " + serial_no + "%n" + - "Location : " + location + "%n" + - "Temperature (F) : " + temperature + "%n" + - "Pressure (inHg) : " + pressure + "%n"); + public String toString() + { + return String.format("Serial number : " + serial_no + "%n" + + "Location : " + location + "%n" + + "Temperature (F) : " + temperature + "%n" + + "Pressure (inHg) : " + pressure + "%n"); } } - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long strtype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long strtype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; Sensor[] object_data = new Sensor[DIM0]; - byte[] dset_data = null; + byte[] dset_data = null; // Initialize data. object_data[0] = new Sensor(1153, new String("Exterior (static)"), 53.23, 24.57); @@ -140,7 +146,7 @@ public class H5Ex_T_Compound { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -164,8 +170,8 @@ public class H5Ex_T_Compound { long type_id = Sensor_Datatype.memberMemTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], Sensor_Datatype.getOffset(indx), - type_id); + H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], + Sensor_Datatype.getOffset(indx), type_id); } } } @@ -184,8 +190,8 @@ public class H5Ex_T_Compound { long type_id = Sensor_Datatype.memberFileTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(filetype_id, Sensor_Datatype.memberNames[indx], Sensor_Datatype.getOffset(indx), - type_id); + H5.H5Tinsert(filetype_id, Sensor_Datatype.memberNames[indx], + Sensor_Datatype.getOffset(indx), type_id); } } } @@ -205,8 +211,9 @@ public class H5Ex_T_Compound { // Create the dataset. try { if ((file_id >= 0) && (dataspace_id >= 0) && (filetype_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, DATASETNAME, filetype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = + H5.H5Dcreate(file_id, DATASETNAME, filetype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -214,16 +221,16 @@ public class H5Ex_T_Compound { // Write the compound data to the dataset. // allocate memory for read buffer. - dset_data = new byte[(int)dims[0] * (int)Sensor_Datatype.getDataSize()]; + dset_data = new byte[(int)dims[0] * (int)Sensor_Datatype.getDataSize()]; ByteBuffer outBuf = ByteBuffer.wrap(dset_data); outBuf.order(ByteOrder.nativeOrder()); - for (int indx = 0; indx < (int) dims[0]; indx++) { + for (int indx = 0; indx < (int)dims[0]; indx++) { object_data[indx].writeBuffer(outBuf, indx * (int)Sensor_Datatype.getDataSize()); } try { if ((dataset_id >= 0) && (memtype_id >= 0)) H5.H5Dwrite(dataset_id, memtype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -281,16 +288,16 @@ public class H5Ex_T_Compound { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long strtype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long strtype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; Sensor[] object_data2; byte[] dset_data; @@ -346,8 +353,8 @@ public class H5Ex_T_Compound { long type_id = Sensor_Datatype.memberMemTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], Sensor_Datatype.getOffset(indx), - type_id); + H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], + Sensor_Datatype.getOffset(indx), type_id); } } } @@ -356,19 +363,19 @@ public class H5Ex_T_Compound { } // allocate memory for read buffer. - dset_data = new byte[(int) dims[0] * (int)Sensor_Datatype.getDataSize()]; + dset_data = new byte[(int)dims[0] * (int)Sensor_Datatype.getDataSize()]; - object_data2 = new Sensor[(int) dims[0]]; + object_data2 = new Sensor[(int)dims[0]]; // Read data. try { if ((dataset_id >= 0) && (memtype_id >= 0)) H5.H5Dread(dataset_id, memtype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); ByteBuffer inBuf = ByteBuffer.wrap(dset_data); inBuf.order(ByteOrder.nativeOrder()); - for (int indx = 0; indx < (int) dims[0]; indx++) { + for (int indx = 0; indx < (int)dims[0]; indx++) { object_data2[indx] = new Sensor(inBuf, indx * (int)Sensor_Datatype.getDataSize()); } } @@ -425,10 +432,10 @@ public class H5Ex_T_Compound { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Compound.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -436,5 +443,4 @@ public class H5Ex_T_Compound { // data using malloc(). H5Ex_T_Compound.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_CompoundAttribute.java b/java/examples/datatypes/H5Ex_T_CompoundAttribute.java index 58d2fb7..f331a1e 100644 --- a/java/examples/datatypes/H5Ex_T_CompoundAttribute.java +++ b/java/examples/datatypes/H5Ex_T_CompoundAttribute.java @@ -20,52 +20,55 @@ package examples.datatypes; -import hdf.hdf5lib.H5; -import hdf.hdf5lib.HDF5Constants; - import java.nio.ByteBuffer; import java.nio.ByteOrder; import java.nio.charset.Charset; +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; + public class H5Ex_T_CompoundAttribute { - private static String FILENAME = "H5Ex_T_CompoundAttribute.h5"; - private static String DATASETNAME = "DS1"; - private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int RANK = 1; - protected static final int INTEGERSIZE = 4; - protected static final int DOUBLESIZE = 8; + private static String FILENAME = "H5Ex_T_CompoundAttribute.h5"; + private static String DATASETNAME = "DS1"; + private static String ATTRIBUTENAME = "A1"; + private static final int DIM0 = 4; + private static final int RANK = 1; + protected static final int INTEGERSIZE = 4; + protected static final int DOUBLESIZE = 8; protected final static int MAXSTRINGSIZE = 80; // Using Java Externalization will add a two-byte object header in // the stream, which needs to be called out in the datatypes. static class Sensor_Datatype { static int numberMembers = 4; - static int[] memberDims = { 1, 1, 1, 1 }; + static int[] memberDims = {1, 1, 1, 1}; - static String[] memberNames = { "Serial number", "Location", "Temperature (F)", "Pressure (inHg)" }; - static long[] memberMemTypes = { HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5T_C_S1, - HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE }; - static long[] memberFileTypes = { HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1, - HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE }; - static int[] memberStorage = { INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE }; + static String[] memberNames = {"Serial number", "Location", "Temperature (F)", "Pressure (inHg)"}; + static long[] memberMemTypes = {HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5T_C_S1, + HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE}; + static long[] memberFileTypes = {HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1, + HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE}; + static int[] memberStorage = {INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE}; // Data size is the storage size for the members not the object. - static long getTotalDataSize() { + static long getTotalDataSize() + { long data_size = 0; for (int indx = 0; indx < numberMembers; indx++) data_size += memberStorage[indx] * memberDims[indx]; return DIM0 * data_size; } - static long getDataSize() { + static long getDataSize() + { long data_size = 0; for (int indx = 0; indx < numberMembers; indx++) data_size += memberStorage[indx] * memberDims[indx]; return data_size; } - static int getOffset(int memberItem) { + static int getOffset(int memberItem) + { int data_offset = 0; for (int indx = 0; indx < memberItem; indx++) data_offset += memberStorage[indx]; @@ -79,61 +82,64 @@ public class H5Ex_T_CompoundAttribute { public double temperature; public double pressure; - Sensor(int serial_no, String location, double temperature, double pressure) { - this.serial_no = serial_no; - this.location = location; + Sensor(int serial_no, String location, double temperature, double pressure) + { + this.serial_no = serial_no; + this.location = location; this.temperature = temperature; - this.pressure = pressure; + this.pressure = pressure; } - Sensor(ByteBuffer databuf, int dbposition) { - readBuffer(databuf, dbposition); - } + Sensor(ByteBuffer databuf, int dbposition) { readBuffer(databuf, dbposition); } - void writeBuffer(ByteBuffer databuf, int dbposition) { + void writeBuffer(ByteBuffer databuf, int dbposition) + { databuf.putInt(dbposition + Sensor_Datatype.getOffset(0), serial_no); byte[] temp_str = location.getBytes(Charset.forName("UTF-8")); - int arraylen = (temp_str.length > MAXSTRINGSIZE) ? MAXSTRINGSIZE : temp_str.length; + int arraylen = (temp_str.length > MAXSTRINGSIZE) ? MAXSTRINGSIZE : temp_str.length; for (int ndx = 0; ndx < arraylen; ndx++) databuf.put(dbposition + Sensor_Datatype.getOffset(1) + ndx, temp_str[ndx]); for (int ndx = arraylen; ndx < MAXSTRINGSIZE; ndx++) - databuf.put(dbposition + Sensor_Datatype.getOffset(1) + arraylen, (byte) 0); + databuf.put(dbposition + Sensor_Datatype.getOffset(1) + arraylen, (byte)0); databuf.putDouble(dbposition + Sensor_Datatype.getOffset(2), temperature); databuf.putDouble(dbposition + Sensor_Datatype.getOffset(3), pressure); } - void readBuffer(ByteBuffer databuf, int dbposition) { - this.serial_no = databuf.getInt(dbposition + Sensor_Datatype.getOffset(0)); + void readBuffer(ByteBuffer databuf, int dbposition) + { + this.serial_no = databuf.getInt(dbposition + Sensor_Datatype.getOffset(0)); ByteBuffer stringbuf = databuf.duplicate(); stringbuf.position(dbposition + Sensor_Datatype.getOffset(1)); stringbuf.limit(dbposition + Sensor_Datatype.getOffset(1) + MAXSTRINGSIZE); byte[] bytearr = new byte[stringbuf.remaining()]; stringbuf.get(bytearr); - this.location = new String(bytearr, Charset.forName("UTF-8")).trim(); + this.location = new String(bytearr, Charset.forName("UTF-8")).trim(); this.temperature = databuf.getDouble(dbposition + Sensor_Datatype.getOffset(2)); - this.pressure = databuf.getDouble(dbposition + Sensor_Datatype.getOffset(3)); + this.pressure = databuf.getDouble(dbposition + Sensor_Datatype.getOffset(3)); } @Override - public String toString() { - return String.format("Serial number : " + serial_no + "%n" + - "Location : " + location + "%n" + - "Temperature (F) : " + temperature + "%n" + - "Pressure (inHg) : " + pressure + "%n"); + public String toString() + { + return String.format("Serial number : " + serial_no + "%n" + + "Location : " + location + "%n" + + "Temperature (F) : " + temperature + "%n" + + "Pressure (inHg) : " + pressure + "%n"); } } - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long strtype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long strtype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long attribute_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; Sensor[] object_data = new Sensor[DIM0]; - byte[] dset_data = null; + byte[] dset_data = null; // Initialize data. object_data[0] = new Sensor(1153, new String("Exterior (static)"), 53.23, 24.57); @@ -144,7 +150,7 @@ public class H5Ex_T_CompoundAttribute { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -168,8 +174,8 @@ public class H5Ex_T_CompoundAttribute { long type_id = Sensor_Datatype.memberMemTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], Sensor_Datatype.getOffset(indx), - type_id); + H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], + Sensor_Datatype.getOffset(indx), type_id); } } } @@ -188,8 +194,8 @@ public class H5Ex_T_CompoundAttribute { long type_id = Sensor_Datatype.memberFileTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(filetype_id, Sensor_Datatype.memberNames[indx], Sensor_Datatype.getOffset(indx), - type_id); + H5.H5Tinsert(filetype_id, Sensor_Datatype.memberNames[indx], + Sensor_Datatype.getOffset(indx), type_id); } } } @@ -202,7 +208,8 @@ public class H5Ex_T_CompoundAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -224,17 +231,17 @@ public class H5Ex_T_CompoundAttribute { try { if ((dataset_id >= 0) && (dataspace_id >= 0) && (filetype_id >= 0)) attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, filetype_id, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Write the compound data. - dset_data = new byte[(int) dims[0] * (int)Sensor_Datatype.getDataSize()]; + dset_data = new byte[(int)dims[0] * (int)Sensor_Datatype.getDataSize()]; ByteBuffer outBuf = ByteBuffer.wrap(dset_data); outBuf.order(ByteOrder.nativeOrder()); - for (int indx = 0; indx < (int) dims[0]; indx++) { + for (int indx = 0; indx < (int)dims[0]; indx++) { object_data[indx].writeBuffer(outBuf, indx * (int)Sensor_Datatype.getDataSize()); } try { @@ -305,17 +312,17 @@ public class H5Ex_T_CompoundAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long strtype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long strtype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + long[] dims = {DIM0}; Sensor[] object_data2; byte[] dset_data; @@ -339,7 +346,7 @@ public class H5Ex_T_CompoundAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -382,8 +389,8 @@ public class H5Ex_T_CompoundAttribute { long type_id = Sensor_Datatype.memberMemTypes[indx]; if (type_id == HDF5Constants.H5T_C_S1) type_id = strtype_id; - H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], Sensor_Datatype.getOffset(indx), - type_id); + H5.H5Tinsert(memtype_id, Sensor_Datatype.memberNames[indx], + Sensor_Datatype.getOffset(indx), type_id); } } } @@ -392,9 +399,9 @@ public class H5Ex_T_CompoundAttribute { } // allocate memory for read buffer. - dset_data = new byte[(int) dims[0] * (int)Sensor_Datatype.getDataSize()]; + dset_data = new byte[(int)dims[0] * (int)Sensor_Datatype.getDataSize()]; - object_data2 = new Sensor[(int) dims[0]]; + object_data2 = new Sensor[(int)dims[0]]; // Read data. try { @@ -403,7 +410,7 @@ public class H5Ex_T_CompoundAttribute { ByteBuffer inBuf = ByteBuffer.wrap(dset_data); inBuf.order(ByteOrder.nativeOrder()); - for (int indx = 0; indx < (int) dims[0]; indx++) { + for (int indx = 0; indx < (int)dims[0]; indx++) { object_data2[indx] = new Sensor(inBuf, indx * (int)Sensor_Datatype.getDataSize()); } } @@ -468,10 +475,10 @@ public class H5Ex_T_CompoundAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_CompoundAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -479,5 +486,4 @@ public class H5Ex_T_CompoundAttribute { // data using malloc(). H5Ex_T_CompoundAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_Float.java b/java/examples/datatypes/H5Ex_T_Float.java index e8da7f6..9ca099e 100644 --- a/java/examples/datatypes/H5Ex_T_Float.java +++ b/java/examples/datatypes/H5Ex_T_Float.java @@ -28,17 +28,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_Float { - private static String FILENAME = "H5Ex_T_Float.h5"; + private static String FILENAME = "H5Ex_T_Float.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int DIM1 = 7; - private static final int RANK = 2; - - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + private static final int DIM0 = 4; + private static final int DIM1 = 7; + private static final int RANK = 2; + + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; double[][] dset_data = new double[DIM0][DIM1]; // Initialize data. @@ -50,7 +51,7 @@ public class H5Ex_T_Float { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -73,7 +74,8 @@ public class H5Ex_T_Float { try { if ((file_id >= 0) && (dataspace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_IEEE_F64LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -82,8 +84,8 @@ public class H5Ex_T_Float { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -115,14 +117,14 @@ public class H5Ex_T_Float { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; double[][] dset_data; // Open an existing file. @@ -161,13 +163,13 @@ public class H5Ex_T_Float { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new double[(int) dims[0]][(int) (dims[1])]; + dset_data = new double[(int)dims[0]][(int)(dims[1])]; // Read data. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -211,10 +213,10 @@ public class H5Ex_T_Float { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Float.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -222,5 +224,4 @@ public class H5Ex_T_Float { // data using malloc(). H5Ex_T_Float.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_FloatAttribute.java b/java/examples/datatypes/H5Ex_T_FloatAttribute.java index eb8e1f8..426c4dd 100644 --- a/java/examples/datatypes/H5Ex_T_FloatAttribute.java +++ b/java/examples/datatypes/H5Ex_T_FloatAttribute.java @@ -28,19 +28,20 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_FloatAttribute { - private static String FILENAME = "H5Ex_T_FloatAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_FloatAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int DIM1 = 7; - private static final int RANK = 2; - - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + private static final int DIM0 = 4; + private static final int DIM1 = 7; + private static final int RANK = 2; + + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long attribute_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; double[][] dset_data = new double[DIM0][DIM1]; // Initialize data. @@ -52,7 +53,7 @@ public class H5Ex_T_FloatAttribute { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -63,7 +64,8 @@ public class H5Ex_T_FloatAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -84,8 +86,9 @@ public class H5Ex_T_FloatAttribute { // Create the attribute and write the array data to it. try { if ((dataset_id >= 0) && (dataspace_id >= 0)) - attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_IEEE_F64LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + attribute_id = + H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_IEEE_F64LE, dataspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -134,15 +137,15 @@ public class H5Ex_T_FloatAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long[] dims = {DIM0, DIM1}; double[][] dset_data; // Open an existing file. @@ -165,7 +168,7 @@ public class H5Ex_T_FloatAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -190,7 +193,7 @@ public class H5Ex_T_FloatAttribute { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new double[(int) dims[0]][(int) (dims[1])]; + dset_data = new double[(int)dims[0]][(int)(dims[1])]; // Read data. try { @@ -247,10 +250,10 @@ public class H5Ex_T_FloatAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_FloatAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -258,5 +261,4 @@ public class H5Ex_T_FloatAttribute { // data using malloc(). H5Ex_T_FloatAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_Integer.java b/java/examples/datatypes/H5Ex_T_Integer.java index bb8e0cb..919ea7e 100644 --- a/java/examples/datatypes/H5Ex_T_Integer.java +++ b/java/examples/datatypes/H5Ex_T_Integer.java @@ -26,17 +26,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_Integer { - private static String FILENAME = "H5Ex_T_Integer.h5"; + private static String FILENAME = "H5Ex_T_Integer.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int DIM1 = 7; - private static final int RANK = 2; + private static final int DIM0 = 4; + private static final int DIM1 = 7; + private static final int RANK = 2; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; int[][] dset_data = new int[DIM0][DIM1]; // Initialize data. @@ -48,7 +49,7 @@ public class H5Ex_T_Integer { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -70,7 +71,8 @@ public class H5Ex_T_Integer { try { if ((file_id >= 0) && (dataspace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I64BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -79,8 +81,8 @@ public class H5Ex_T_Integer { // Write the data to the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -112,14 +114,14 @@ public class H5Ex_T_Integer { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0, DIM1}; int[][] dset_data; // Open an existing file. @@ -158,13 +160,13 @@ public class H5Ex_T_Integer { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new int[(int) dims[0]][(int) (dims[1])]; + dset_data = new int[(int)dims[0]][(int)(dims[1])]; // Read data. try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -208,10 +210,10 @@ public class H5Ex_T_Integer { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Integer.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -219,5 +221,4 @@ public class H5Ex_T_Integer { // data using malloc(). H5Ex_T_Integer.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_IntegerAttribute.java b/java/examples/datatypes/H5Ex_T_IntegerAttribute.java index b0df5e4..4ec98c4 100644 --- a/java/examples/datatypes/H5Ex_T_IntegerAttribute.java +++ b/java/examples/datatypes/H5Ex_T_IntegerAttribute.java @@ -26,19 +26,20 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_IntegerAttribute { - private static String FILENAME = "H5Ex_T_IntegerAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_IntegerAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int DIM1 = 7; - private static final int RANK = 2; + private static final int DIM0 = 4; + private static final int DIM1 = 7; + private static final int RANK = 2; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long[] dims = {DIM0, DIM1}; int[][] dset_data = new int[DIM0][DIM1]; // Initialize data. @@ -50,7 +51,7 @@ public class H5Ex_T_IntegerAttribute { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -61,7 +62,8 @@ public class H5Ex_T_IntegerAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -82,8 +84,9 @@ public class H5Ex_T_IntegerAttribute { // Create the attribute and write the array data to it. try { if ((dataset_id >= 0) && (dataspace_id >= 0)) - attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_STD_I64BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + attribute_id = + H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_STD_I64BE, dataspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -132,15 +135,15 @@ public class H5Ex_T_IntegerAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0, DIM1 }; + long[] dims = {DIM0, DIM1}; int[][] dset_data; // Open an existing file. @@ -163,7 +166,7 @@ public class H5Ex_T_IntegerAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -188,7 +191,7 @@ public class H5Ex_T_IntegerAttribute { // Allocate array of pointers to two-dimensional arrays (the // elements of the dataset. - dset_data = new int[(int) dims[0]][(int) (dims[1])]; + dset_data = new int[(int)dims[0]][(int)(dims[1])]; // Read data. try { @@ -245,10 +248,10 @@ public class H5Ex_T_IntegerAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_IntegerAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -256,5 +259,4 @@ public class H5Ex_T_IntegerAttribute { // data using malloc(). H5Ex_T_IntegerAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_ObjectReference.java b/java/examples/datatypes/H5Ex_T_ObjectReference.java index b0f98de..9220d8f 100644 --- a/java/examples/datatypes/H5Ex_T_ObjectReference.java +++ b/java/examples/datatypes/H5Ex_T_ObjectReference.java @@ -28,54 +28,50 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_ObjectReference { - private static String FILENAME = "H5Ex_T_ObjectReference.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_ObjectReference.h5"; + private static String DATASETNAME = "DS1"; private static String DATASETNAME2 = "DS2"; - private static String GROUPNAME = "G1"; - private static final int DIM0 = 2; - private static final int RANK = 1; + private static String GROUPNAME = "G1"; + private static final int DIM0 = 2; + private static final int RANK = 1; // Values for the status of space allocation enum H5G_obj { - H5G_UNKNOWN(HDF5Constants.H5O_TYPE_UNKNOWN), /* Unknown object type */ - H5G_GROUP(HDF5Constants.H5O_TYPE_GROUP), /* Object is a group */ - H5G_DATASET(HDF5Constants.H5O_TYPE_DATASET), /* Object is a dataset */ + H5G_UNKNOWN(HDF5Constants.H5O_TYPE_UNKNOWN), /* Unknown object type */ + H5G_GROUP(HDF5Constants.H5O_TYPE_GROUP), /* Object is a group */ + H5G_DATASET(HDF5Constants.H5O_TYPE_DATASET), /* Object is a dataset */ H5G_TYPE(HDF5Constants.H5O_TYPE_NAMED_DATATYPE); /* Object is a named data type */ private static final Map lookup = new HashMap(); - static { + static + { for (H5G_obj s : EnumSet.allOf(H5G_obj.class)) lookup.put(s.getCode(), s); } private int code; - H5G_obj(int layout_type) { - this.code = layout_type; - } + H5G_obj(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5G_obj get(int code) { - return lookup.get(code); - } + public static H5G_obj get(int code) { return lookup.get(code); } } - private static void writeObjRef() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long filespace_id = HDF5Constants.H5I_INVALID_HID; - long group_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + private static void writeObjRef() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long filespace_id = HDF5Constants.H5I_INVALID_HID; + long group_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; byte[][] dset_data = new byte[DIM0][HDF5Constants.H5R_REF_BUF_SIZE]; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -86,7 +82,8 @@ public class H5Ex_T_ObjectReference { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if ((file_id >= 0) && (dataspace_id >= 0)) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME2, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); if (dataset_id >= 0) H5.H5Dclose(dataset_id); dataset_id = HDF5Constants.H5I_INVALID_HID; @@ -101,8 +98,8 @@ public class H5Ex_T_ObjectReference { // Create a group in the file. try { if (file_id >= 0) - group_id = H5.H5Gcreate(file_id, GROUPNAME, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + group_id = H5.H5Gcreate(file_id, GROUPNAME, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (group_id >= 0) H5.H5Gclose(group_id); group_id = HDF5Constants.H5I_INVALID_HID; @@ -119,7 +116,7 @@ public class H5Ex_T_ObjectReference { catch (Throwable err) { err.printStackTrace(); } - + try { dset_data[1] = H5.H5Rcreate_object(file_id, DATASETNAME2, HDF5Constants.H5P_DEFAULT); } @@ -127,7 +124,7 @@ public class H5Ex_T_ObjectReference { err.printStackTrace(); } } - + // Create dataspace. Setting maximum size to NULL sets the maximum // size to be the current size. try { @@ -136,22 +133,23 @@ public class H5Ex_T_ObjectReference { catch (Exception e) { e.printStackTrace(); } - + // Create the dataset. try { if ((file_id >= 0) && (filespace_id >= 0)) dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_REF, filespace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } - + // Write the object references to it. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -161,8 +159,16 @@ public class H5Ex_T_ObjectReference { ex.printStackTrace(); } finally { - try {H5.H5Rdestroy(dset_data[1]);} catch (Exception ex) {} - try {H5.H5Rdestroy(dset_data[0]);} catch (Exception ex) {} + try { + H5.H5Rdestroy(dset_data[1]); + } + catch (Exception ex) { + } + try { + H5.H5Rdestroy(dset_data[0]); + } + catch (Exception ex) { + } } // End access to the dataset and release resources used by it. @@ -193,13 +199,14 @@ public class H5Ex_T_ObjectReference { } } - private static void readObjRef() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - int object_type = -1; - long object_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + private static void readObjRef() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + int object_type = -1; + long object_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; byte[][] dset_data = new byte[DIM0][HDF5Constants.H5R_REF_BUF_SIZE]; // Open an existing file. @@ -209,23 +216,24 @@ public class H5Ex_T_ObjectReference { // Open an existing dataset. try { dataset_id = H5.H5Dopen(file_id, DATASETNAME, HDF5Constants.H5P_DEFAULT); - + try { // Get dataspace and allocate memory for read buffer. dataspace_id = H5.H5Dget_space(dataset_id); H5.H5Sget_simple_extent_dims(dataspace_id, dims, null); - + // Read data. - H5.H5Dread(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); - + H5.H5Dread(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); + // Output the data to the screen. for (int indx = 0; indx < dims[0]; indx++) { System.out.println(DATASETNAME + "[" + indx + "]:"); System.out.print(" ->"); // Open the referenced object, get its name and type. try { - object_id = H5.H5Ropen_object(dset_data[indx], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + object_id = H5.H5Ropen_object(dset_data[indx], HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); try { object_type = H5.H5Rget_obj_type3(dset_data[indx], HDF5Constants.H5R_OBJECT); String obj_name = null; @@ -255,14 +263,22 @@ public class H5Ex_T_ObjectReference { e.printStackTrace(); } finally { - try {H5.H5Oclose(object_id);} catch (Exception e) {} + try { + H5.H5Oclose(object_id); + } + catch (Exception e) { + } } } catch (Exception e4) { e4.printStackTrace(); } finally { - try {H5.H5Rdestroy(dset_data[indx]);} catch (Exception e4) {} + try { + H5.H5Rdestroy(dset_data[indx]); + } + catch (Exception e4) { + } } } // end for } @@ -270,25 +286,38 @@ public class H5Ex_T_ObjectReference { e3.printStackTrace(); } finally { - try {H5.H5Sclose(dataspace_id);} catch (Exception e3) {} + try { + H5.H5Sclose(dataspace_id); + } + catch (Exception e3) { + } } } catch (Exception e2) { e2.printStackTrace(); } finally { - try {H5.H5Dclose(dataset_id);} catch (Exception e2) {} + try { + H5.H5Dclose(dataset_id); + } + catch (Exception e2) { + } } } catch (Exception e1) { e1.printStackTrace(); } finally { - try {H5.H5Fclose(file_id);} catch (Exception e1) {} + try { + H5.H5Fclose(file_id); + } + catch (Exception e1) { + } } } - public static void main(String[] args) { + public static void main(String[] args) + { // Check if gzip compression is available and can be used for both // compression and decompression. Normally we do not perform error // checking in these examples for the sake of clarity, but in this @@ -297,5 +326,4 @@ public class H5Ex_T_ObjectReference { H5Ex_T_ObjectReference.writeObjRef(); H5Ex_T_ObjectReference.readObjRef(); } - } diff --git a/java/examples/datatypes/H5Ex_T_ObjectReferenceAttribute.java b/java/examples/datatypes/H5Ex_T_ObjectReferenceAttribute.java index f61ae0d..be84e51 100644 --- a/java/examples/datatypes/H5Ex_T_ObjectReferenceAttribute.java +++ b/java/examples/datatypes/H5Ex_T_ObjectReferenceAttribute.java @@ -28,55 +28,51 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_ObjectReferenceAttribute { - private static String FILENAME = "H5Ex_T_ObjectReferenceAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_ObjectReferenceAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static String DATASETNAME2 = "DS2"; - private static String GROUPNAME = "G1"; - private static final int DIM0 = 2; - private static final int RANK = 1; + private static String DATASETNAME2 = "DS2"; + private static String GROUPNAME = "G1"; + private static final int DIM0 = 2; + private static final int RANK = 1; // Values for the status of space allocation enum H5G_obj { - H5G_UNKNOWN(HDF5Constants.H5O_TYPE_UNKNOWN), /* Unknown object type */ - H5G_GROUP(HDF5Constants.H5O_TYPE_GROUP), /* Object is a group */ - H5G_DATASET(HDF5Constants.H5O_TYPE_DATASET), /* Object is a dataset */ + H5G_UNKNOWN(HDF5Constants.H5O_TYPE_UNKNOWN), /* Unknown object type */ + H5G_GROUP(HDF5Constants.H5O_TYPE_GROUP), /* Object is a group */ + H5G_DATASET(HDF5Constants.H5O_TYPE_DATASET), /* Object is a dataset */ H5G_TYPE(HDF5Constants.H5O_TYPE_NAMED_DATATYPE); /* Object is a named data type */ private static final Map lookup = new HashMap(); - static { + static + { for (H5G_obj s : EnumSet.allOf(H5G_obj.class)) lookup.put(s.getCode(), s); } private int code; - H5G_obj(int layout_type) { - this.code = layout_type; - } + H5G_obj(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5G_obj get(int code) { - return lookup.get(code); - } + public static H5G_obj get(int code) { return lookup.get(code); } } - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long group_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long group_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long attribute_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; byte[][] dset_data = new byte[DIM0][HDF5Constants.H5R_REF_BUF_SIZE]; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -87,7 +83,8 @@ public class H5Ex_T_ObjectReferenceAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if ((file_id >= 0) && (dataspace_id >= 0)) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME2, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); if (dataset_id >= 0) H5.H5Dclose(dataset_id); dataset_id = HDF5Constants.H5I_INVALID_HID; @@ -102,8 +99,8 @@ public class H5Ex_T_ObjectReferenceAttribute { // Create a group in the file. try { if (file_id >= 0) - group_id = H5.H5Gcreate(file_id, GROUPNAME, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + group_id = H5.H5Gcreate(file_id, GROUPNAME, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (group_id >= 0) H5.H5Gclose(group_id); group_id = HDF5Constants.H5I_INVALID_HID; @@ -120,7 +117,7 @@ public class H5Ex_T_ObjectReferenceAttribute { catch (Throwable err) { err.printStackTrace(); } - + try { dset_data[1] = H5.H5Rcreate_object(file_id, DATASETNAME2, HDF5Constants.H5P_DEFAULT); } @@ -135,7 +132,8 @@ public class H5Ex_T_ObjectReferenceAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -143,7 +141,7 @@ public class H5Ex_T_ObjectReferenceAttribute { catch (Exception e) { e.printStackTrace(); } - + // Create dataspace. Setting maximum size to NULL sets the maximum // size to be the current size. try { @@ -152,17 +150,18 @@ public class H5Ex_T_ObjectReferenceAttribute { catch (Exception e) { e.printStackTrace(); } - + // Create the attribute and write the array data to it. try { if ((dataset_id >= 0) && (dataspace_id >= 0)) - attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_STD_REF, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + attribute_id = + H5.H5Acreate(dataset_id, ATTRIBUTENAME, HDF5Constants.H5T_STD_REF, dataspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } - + // Write the dataset. try { if (attribute_id >= 0) @@ -176,8 +175,16 @@ public class H5Ex_T_ObjectReferenceAttribute { ex.printStackTrace(); } finally { - try {H5.H5Rdestroy(dset_data[1]);} catch (Exception ex) {} - try {H5.H5Rdestroy(dset_data[0]);} catch (Exception ex) {} + try { + H5.H5Rdestroy(dset_data[1]); + } + catch (Exception ex) { + } + try { + H5.H5Rdestroy(dset_data[0]); + } + catch (Exception ex) { + } } // End access to the dataset and release resources used by it. @@ -215,14 +222,15 @@ public class H5Ex_T_ObjectReferenceAttribute { } } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long attribute_id = HDF5Constants.H5I_INVALID_HID; - int object_type = -1; - long object_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long attribute_id = HDF5Constants.H5I_INVALID_HID; + int object_type = -1; + long object_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; byte[][] dset_data = new byte[DIM0][HDF5Constants.H5R_REF_BUF_SIZE]; // Open an existing file. @@ -232,28 +240,30 @@ public class H5Ex_T_ObjectReferenceAttribute { // Open an existing dataset. try { dataset_id = H5.H5Dopen(file_id, DATASETNAME, HDF5Constants.H5P_DEFAULT); - + try { - attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); - + attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + // Get dataspace and allocate memory for read buffer. try { dataspace_id = H5.H5Aget_space(attribute_id); H5.H5Sget_simple_extent_dims(dataspace_id, dims, null); - + // Read data. H5.H5Aread(attribute_id, HDF5Constants.H5T_STD_REF, dset_data); - + // Output the data to the screen. for (int indx = 0; indx < dims[0]; indx++) { System.out.println(ATTRIBUTENAME + "[" + indx + "]:"); System.out.print(" ->"); // Open the referenced object, get its name and type. try { - object_id = H5.H5Ropen_object(dset_data[indx], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + object_id = H5.H5Ropen_object(dset_data[indx], HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); try { - object_type = H5.H5Rget_obj_type3(dset_data[indx], HDF5Constants.H5R_OBJECT); + object_type = + H5.H5Rget_obj_type3(dset_data[indx], HDF5Constants.H5R_OBJECT); String obj_name = null; if (object_type >= 0) { // Get the name. @@ -281,14 +291,22 @@ public class H5Ex_T_ObjectReferenceAttribute { e.printStackTrace(); } finally { - try {H5.H5Oclose(object_id);} catch (Exception e) {} + try { + H5.H5Oclose(object_id); + } + catch (Exception e) { + } } } catch (Exception e5) { e5.printStackTrace(); } finally { - try {H5.H5Rdestroy(dset_data[indx]);} catch (Exception e5) {} + try { + H5.H5Rdestroy(dset_data[indx]); + } + catch (Exception e5) { + } } } // end for } @@ -296,32 +314,49 @@ public class H5Ex_T_ObjectReferenceAttribute { e4.printStackTrace(); } finally { - try {H5.H5Sclose(dataspace_id);} catch (Exception e3) {} + try { + H5.H5Sclose(dataspace_id); + } + catch (Exception e3) { + } } } catch (Exception e3) { e3.printStackTrace(); } finally { - try {H5.H5Aclose(attribute_id);} catch (Exception e4) {} + try { + H5.H5Aclose(attribute_id); + } + catch (Exception e4) { + } } } catch (Exception e2) { e2.printStackTrace(); } finally { - try {H5.H5Dclose(dataset_id);} catch (Exception e2) {} + try { + H5.H5Dclose(dataset_id); + } + catch (Exception e2) { + } } } catch (Exception e1) { e1.printStackTrace(); } finally { - try {H5.H5Fclose(file_id);} catch (Exception e1) {} + try { + H5.H5Fclose(file_id); + } + catch (Exception e1) { + } } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_ObjectReferenceAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -329,5 +364,4 @@ public class H5Ex_T_ObjectReferenceAttribute { // data using malloc(). H5Ex_T_ObjectReferenceAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_Opaque.java b/java/examples/datatypes/H5Ex_T_Opaque.java index e851fb2..419a5c8 100644 --- a/java/examples/datatypes/H5Ex_T_Opaque.java +++ b/java/examples/datatypes/H5Ex_T_Opaque.java @@ -24,32 +24,33 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_Opaque { - private static String FILENAME = "H5Ex_T_Opaque.h5"; + private static String FILENAME = "H5Ex_T_Opaque.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int LEN = 7; - private static final int RANK = 1; + private static final int DIM0 = 4; + private static final int LEN = 7; + private static final int RANK = 1; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long datatype_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - byte[] dset_data = new byte[DIM0 * LEN]; - byte[] str_data = { 'O', 'P', 'A', 'Q', 'U', 'E' }; + long datatype_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; + byte[] dset_data = new byte[DIM0 * LEN]; + byte[] str_data = {'O', 'P', 'A', 'Q', 'U', 'E'}; // Initialize data. for (int indx = 0; indx < DIM0; indx++) { for (int jndx = 0; jndx < LEN - 1; jndx++) dset_data[jndx + indx * LEN] = str_data[jndx]; - dset_data[LEN - 1 + indx * LEN] = (byte) (indx + '0'); + dset_data[LEN - 1 + indx * LEN] = (byte)(indx + '0'); } // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -82,8 +83,9 @@ public class H5Ex_T_Opaque { // automatically converts between different integer types. try { if ((file_id >= 0) && (datatype_id >= 0) && (dataspace_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, DATASETNAME, datatype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = + H5.H5Dcreate(file_id, DATASETNAME, datatype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -93,7 +95,7 @@ public class H5Ex_T_Opaque { try { if ((dataset_id >= 0) && (datatype_id >= 0)) H5.H5Dwrite(dataset_id, datatype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -133,16 +135,16 @@ public class H5Ex_T_Opaque { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long datatype_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long datatype_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long type_len = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long type_len = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; byte[] dset_data; String tag_name = null; @@ -194,13 +196,13 @@ public class H5Ex_T_Opaque { } // Allocate buffer. - dset_data = new byte[(int) (dims[0] * type_len)]; + dset_data = new byte[(int)(dims[0] * type_len)]; // Read data. try { if ((dataset_id >= 0) && (datatype_id >= 0)) H5.H5Dread(dataset_id, datatype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -211,7 +213,7 @@ public class H5Ex_T_Opaque { for (int indx = 0; indx < dims[0]; indx++) { System.out.print(DATASETNAME + "[" + indx + "]: "); for (int jndx = 0; jndx < type_len; jndx++) { - char temp = (char) dset_data[jndx + indx * (int)type_len]; + char temp = (char)dset_data[jndx + indx * (int)type_len]; System.out.print(temp); } System.out.println(""); @@ -252,10 +254,10 @@ public class H5Ex_T_Opaque { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_Opaque.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -263,5 +265,4 @@ public class H5Ex_T_Opaque { // data using malloc(). H5Ex_T_Opaque.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_OpaqueAttribute.java b/java/examples/datatypes/H5Ex_T_OpaqueAttribute.java index 3e16ab4..b8a15a6 100644 --- a/java/examples/datatypes/H5Ex_T_OpaqueAttribute.java +++ b/java/examples/datatypes/H5Ex_T_OpaqueAttribute.java @@ -24,34 +24,35 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_OpaqueAttribute { - private static String FILENAME = "H5Ex_T_OpaqueAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_OpaqueAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int LEN = 7; - private static final int RANK = 1; + private static final int DIM0 = 4; + private static final int LEN = 7; + private static final int RANK = 1; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long datatype_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long datatype_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - byte[] dset_data = new byte[DIM0 * LEN]; - byte[] str_data = { 'O', 'P', 'A', 'Q', 'U', 'E' }; + long[] dims = {DIM0}; + byte[] dset_data = new byte[DIM0 * LEN]; + byte[] str_data = {'O', 'P', 'A', 'Q', 'U', 'E'}; // Initialize data. for (int indx = 0; indx < DIM0; indx++) { for (int jndx = 0; jndx < LEN - 1; jndx++) dset_data[jndx + indx * LEN] = str_data[jndx]; - dset_data[LEN - 1 + indx * LEN] = (byte) (indx + '0'); + dset_data[LEN - 1 + indx * LEN] = (byte)(indx + '0'); } // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -62,7 +63,8 @@ public class H5Ex_T_OpaqueAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -96,7 +98,7 @@ public class H5Ex_T_OpaqueAttribute { try { if ((dataset_id >= 0) && (datatype_id >= 0) && (dataspace_id >= 0)) attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, datatype_id, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -153,17 +155,17 @@ public class H5Ex_T_OpaqueAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long datatype_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long datatype_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long type_len = -1; - long[] dims = { DIM0 }; + long type_len = -1; + long[] dims = {DIM0}; byte[] dset_data; String tag_name = null; @@ -187,7 +189,7 @@ public class H5Ex_T_OpaqueAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -224,7 +226,7 @@ public class H5Ex_T_OpaqueAttribute { } // Allocate buffer. - dset_data = new byte[(int) (dims[0] * type_len)]; + dset_data = new byte[(int)(dims[0] * type_len)]; // Read data. try { @@ -240,7 +242,7 @@ public class H5Ex_T_OpaqueAttribute { for (int indx = 0; indx < dims[0]; indx++) { System.out.print(ATTRIBUTENAME + "[" + indx + "]: "); for (int jndx = 0; jndx < type_len; jndx++) { - char temp = (char) dset_data[jndx + indx * (int)type_len]; + char temp = (char)dset_data[jndx + indx * (int)type_len]; System.out.print(temp); } System.out.println(""); @@ -289,10 +291,10 @@ public class H5Ex_T_OpaqueAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_OpaqueAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -300,5 +302,4 @@ public class H5Ex_T_OpaqueAttribute { // data using malloc(). H5Ex_T_OpaqueAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_String.java b/java/examples/datatypes/H5Ex_T_String.java index e497bd8..a69a70b 100644 --- a/java/examples/datatypes/H5Ex_T_String.java +++ b/java/examples/datatypes/H5Ex_T_String.java @@ -24,27 +24,28 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_String { - private static String FILENAME = "H5Ex_T_String.h5"; + private static String FILENAME = "H5Ex_T_String.h5"; private static String DATASETNAME = "DS1"; - private static final int DIM0 = 4; - private static final int SDIM = 8; - private static final int RANK = 1; - - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - byte[][] dset_data = new byte[DIM0][SDIM]; - StringBuffer[] str_data = { new StringBuffer("Parting"), new StringBuffer("is such"), - new StringBuffer("sweet"), new StringBuffer("sorrow.") }; + private static final int DIM0 = 4; + private static final int SDIM = 8; + private static final int RANK = 1; + + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; + byte[][] dset_data = new byte[DIM0][SDIM]; + StringBuffer[] str_data = {new StringBuffer("Parting"), new StringBuffer("is such"), + new StringBuffer("sweet"), new StringBuffer("sorrow.")}; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -82,8 +83,9 @@ public class H5Ex_T_String { // Create the dataset and write the string data to it. try { if ((file_id >= 0) && (filetype_id >= 0) && (dataspace_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, DATASETNAME, filetype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = + H5.H5Dcreate(file_id, DATASETNAME, filetype_id, dataspace_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -94,14 +96,14 @@ public class H5Ex_T_String { for (int indx = 0; indx < DIM0; indx++) { for (int jndx = 0; jndx < SDIM; jndx++) { if (jndx < str_data[indx].length()) - dset_data[indx][jndx] = (byte) str_data[indx].charAt(jndx); + dset_data[indx][jndx] = (byte)str_data[indx].charAt(jndx); else dset_data[indx][jndx] = 0; } } if ((dataset_id >= 0) && (memtype_id >= 0)) H5.H5Dwrite(dataset_id, memtype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -151,17 +153,17 @@ public class H5Ex_T_String { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long sdim = 0; - long[] dims = { DIM0 }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long sdim = 0; + long[] dims = {DIM0}; byte[][] dset_data; StringBuffer[] str_data; @@ -213,8 +215,8 @@ public class H5Ex_T_String { } // Allocate space for data. - dset_data = new byte[(int) dims[0]][(int)sdim]; - str_data = new StringBuffer[(int) dims[0]]; + dset_data = new byte[(int)dims[0]][(int)sdim]; + str_data = new StringBuffer[(int)dims[0]]; // Create the memory datatype. try { @@ -230,9 +232,9 @@ public class H5Ex_T_String { try { if ((dataset_id >= 0) && (memtype_id >= 0)) H5.H5Dread(dataset_id, memtype_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + HDF5Constants.H5P_DEFAULT, dset_data); byte[] tempbuf = new byte[(int)sdim]; - for (int indx = 0; indx < (int) dims[0]; indx++) { + for (int indx = 0; indx < (int)dims[0]; indx++) { for (int jndx = 0; jndx < sdim; jndx++) { tempbuf[jndx] = dset_data[indx][jndx]; } @@ -293,10 +295,10 @@ public class H5Ex_T_String { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_String.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -304,5 +306,4 @@ public class H5Ex_T_String { // data using malloc(). H5Ex_T_String.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_StringAttribute.java b/java/examples/datatypes/H5Ex_T_StringAttribute.java index 700f6a9..46c1038 100644 --- a/java/examples/datatypes/H5Ex_T_StringAttribute.java +++ b/java/examples/datatypes/H5Ex_T_StringAttribute.java @@ -24,29 +24,30 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_T_StringAttribute { - private static String FILENAME = "H5Ex_T_StringAttribute.h5"; - private static String DATASETNAME = "DS1"; + private static String FILENAME = "H5Ex_T_StringAttribute.h5"; + private static String DATASETNAME = "DS1"; private static String ATTRIBUTENAME = "A1"; - private static final int DIM0 = 4; - private static final int SDIM = 8; - private static final int RANK = 1; - - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM0 }; - byte[][] dset_data = new byte[DIM0][SDIM]; - StringBuffer[] str_data = { new StringBuffer("Parting"), new StringBuffer("is such"), - new StringBuffer("sweet"), new StringBuffer("sorrow.") }; + private static final int DIM0 = 4; + private static final int SDIM = 8; + private static final int RANK = 1; + + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long attribute_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM0}; + byte[][] dset_data = new byte[DIM0][SDIM]; + StringBuffer[] str_data = {new StringBuffer("Parting"), new StringBuffer("is such"), + new StringBuffer("sweet"), new StringBuffer("sorrow.")}; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -77,7 +78,8 @@ public class H5Ex_T_StringAttribute { dataspace_id = H5.H5Screate(HDF5Constants.H5S_SCALAR); if (dataspace_id >= 0) { dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); H5.H5Sclose(dataspace_id); dataspace_id = HDF5Constants.H5I_INVALID_HID; } @@ -99,7 +101,7 @@ public class H5Ex_T_StringAttribute { try { if ((dataset_id >= 0) && (dataspace_id >= 0) && (filetype_id >= 0)) attribute_id = H5.H5Acreate(dataset_id, ATTRIBUTENAME, filetype_id, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -110,7 +112,7 @@ public class H5Ex_T_StringAttribute { for (int indx = 0; indx < DIM0; indx++) { for (int jndx = 0; jndx < SDIM; jndx++) { if (jndx < str_data[indx].length()) - dset_data[indx][jndx] = (byte) str_data[indx].charAt(jndx); + dset_data[indx][jndx] = (byte)str_data[indx].charAt(jndx); else dset_data[indx][jndx] = 0; } @@ -174,18 +176,18 @@ public class H5Ex_T_StringAttribute { catch (Exception e) { e.printStackTrace(); } - } - private static void ReadDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long filetype_id = HDF5Constants.H5I_INVALID_HID; - long memtype_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long filetype_id = HDF5Constants.H5I_INVALID_HID; + long memtype_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long sdim = 0; - long[] dims = { DIM0 }; + long sdim = 0; + long[] dims = {DIM0}; byte[][] dset_data; StringBuffer[] str_data; @@ -209,7 +211,7 @@ public class H5Ex_T_StringAttribute { try { if (dataset_id >= 0) attribute_id = H5.H5Aopen_by_name(dataset_id, ".", ATTRIBUTENAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -246,8 +248,8 @@ public class H5Ex_T_StringAttribute { } // Allocate space for data. - dset_data = new byte[(int) dims[0]][(int)sdim]; - str_data = new StringBuffer[(int) dims[0]]; + dset_data = new byte[(int)dims[0]][(int)sdim]; + str_data = new StringBuffer[(int)dims[0]]; // Create the memory datatype. try { @@ -264,7 +266,7 @@ public class H5Ex_T_StringAttribute { if ((attribute_id >= 0) && (memtype_id >= 0)) H5.H5Aread(attribute_id, memtype_id, dset_data); byte[] tempbuf = new byte[(int)sdim]; - for (int indx = 0; indx < (int) dims[0]; indx++) { + for (int indx = 0; indx < (int)dims[0]; indx++) { for (int jndx = 0; jndx < sdim; jndx++) { tempbuf[jndx] = dset_data[indx][jndx]; } @@ -333,10 +335,10 @@ public class H5Ex_T_StringAttribute { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_StringAttribute.CreateDataset(); // Now we begin the read section of this example. Here we assume // the dataset and array have the same name and rank, but can have @@ -344,5 +346,4 @@ public class H5Ex_T_StringAttribute { // data using malloc(). H5Ex_T_StringAttribute.ReadDataset(); } - } diff --git a/java/examples/datatypes/H5Ex_T_VLString.java b/java/examples/datatypes/H5Ex_T_VLString.java index 8a29e60..1d4c2c4 100644 --- a/java/examples/datatypes/H5Ex_T_VLString.java +++ b/java/examples/datatypes/H5Ex_T_VLString.java @@ -19,24 +19,24 @@ package examples.datatypes; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -public class H5Ex_T_VLString -{ - private static String FILENAME = "H5Ex_T_VLString.h5"; +public class H5Ex_T_VLString { + private static String FILENAME = "H5Ex_T_VLString.h5"; private static String DATASETNAME = "DS1"; - private static void createDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long type_id = HDF5Constants.H5I_INVALID_HID; + private static void createDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long type_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - int rank = 1; - String[] str_data = { "Parting", "is such", "sweet", "sorrow." }; - long[] dims = { str_data.length }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + int rank = 1; + String[] str_data = {"Parting", "is such", "sweet", "sorrow."}; + long[] dims = {str_data.length}; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -62,8 +62,9 @@ public class H5Ex_T_VLString // Create the dataset and write the string data to it. try { if ((file_id >= 0) && (type_id >= 0) && (dataspace_id >= 0)) { - dataset_id = H5.H5Dcreate(file_id, DATASETNAME, type_id, dataspace_id, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = + H5.H5Dcreate(file_id, DATASETNAME, type_id, dataspace_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } } catch (Exception e) { @@ -74,7 +75,7 @@ public class H5Ex_T_VLString try { if (dataset_id >= 0) H5.H5Dwrite_VLStrings(dataset_id, type_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, str_data); + HDF5Constants.H5P_DEFAULT, str_data); } catch (Exception e) { e.printStackTrace(); @@ -91,11 +92,12 @@ public class H5Ex_T_VLString } } - private static void readDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long type_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - String[] str_data = { "", "", "", "" }; + private static void readDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long type_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + String[] str_data = {"", "", "", ""}; try { file_id = H5.H5Fopen(FILENAME, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT); @@ -106,9 +108,9 @@ public class H5Ex_T_VLString try { dataset_id = H5.H5Dopen(file_id, DATASETNAME, HDF5Constants.H5P_DEFAULT); - type_id = H5.H5Dget_type(dataset_id); - H5.H5Dread_VLStrings(dataset_id, type_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, - str_data); + type_id = H5.H5Dget_type(dataset_id); + H5.H5Dread_VLStrings(dataset_id, type_id, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, + HDF5Constants.H5P_DEFAULT, str_data); } catch (Exception e) { e.printStackTrace(); @@ -127,9 +129,9 @@ public class H5Ex_T_VLString } } - public static void main(String[] args) { + public static void main(String[] args) + { H5Ex_T_VLString.createDataset(); H5Ex_T_VLString.readDataset(); } - } diff --git a/java/examples/datatypes/JavaDatatypeExample.sh.in b/java/examples/datatypes/JavaDatatypeExample.sh.in index c6f5dbc..a82d883 100644 --- a/java/examples/datatypes/JavaDatatypeExample.sh.in +++ b/java/examples/datatypes/JavaDatatypeExample.sh.in @@ -26,6 +26,7 @@ CMP='cmp' DIFF='diff -c' CP='cp' DIRNAME='dirname' +BASENAME='basename' LS='ls' AWK='awk' @@ -100,17 +101,21 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." # Comment out this to CREATE expected file exit $EXIT_FAILURE fi + BNAME=`$BASENAME $tstfile` + if [ "$BNAME" = "libhdf5_java.dylib" ]; then + COPIED_LIBHDF5_JAVA=1 + fi fi fi done - if [ "$IS_DARWIN" = "yes" ]; then + if [[ "$IS_DARWIN" = "yes" ]] && [[ $COPIED_LIBHDF5_JAVA -eq 1 ]]; then (cd $BLDLIBDIR; \ install_name_tool -add_rpath @loader_path libhdf5_java.dylib; \ exist_path=` otool -l libhdf5_java.dylib | grep libhdf5 | grep -v java | awk '{print $2}'`; \ @@ -131,7 +136,7 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." @@ -152,10 +157,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - for tstfile in $COPY_JARTESTFILES - do - $RM $BLDLIBDIR/tstfile - done + $RM -rf $BLDLIBDIR fi } diff --git a/java/examples/groups/CMakeLists.txt b/java/examples/groups/CMakeLists.txt index 6483f91..9f20abf 100644 --- a/java/examples/groups/CMakeLists.txt +++ b/java/examples/groups/CMakeLists.txt @@ -36,6 +36,13 @@ foreach (example ${HDF_JAVA_EXAMPLES}) # install_jar (${example} ${HJAVA_INSTALL_DATA_DIR}/examples examples) get_target_property (${example}_CLASSPATH ${example} CLASSDIR) add_dependencies (${example} ${HDF5_JAVA_HDF5_LIB_TARGET}) + + #----------------------------------------------------------------------------- + # Add Target to clang-format + #----------------------------------------------------------------------------- + if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_JAVA_${example}_SRC_FORMAT ${example}.java) + endif () endforeach () set (CMAKE_JAVA_INCLUDE_PATH "${HDF5_JAVA_JARS};${HDF5_JAVA_LOGGING_JAR};${HDF5_JAVA_LOGGING_NOP_JAR}") diff --git a/java/examples/groups/H5Ex_G_Compact.java b/java/examples/groups/H5Ex_G_Compact.java index 313c9c7..2c6535a 100644 --- a/java/examples/groups/H5Ex_G_Compact.java +++ b/java/examples/groups/H5Ex_G_Compact.java @@ -16,14 +16,14 @@ package examples.groups; -import hdf.hdf5lib.H5; -import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.structs.H5G_info_t; - import java.util.EnumSet; import java.util.HashMap; import java.util.Map; +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; +import hdf.hdf5lib.structs.H5G_info_t; + public class H5Ex_G_Compact { private static final String FILE1 = "H5Ex_G_Compact1.h5"; @@ -38,44 +38,42 @@ public class H5Ex_G_Compact { private static final Map lookup = new HashMap(); - static { + static + { for (H5G_storage s : EnumSet.allOf(H5G_storage.class)) lookup.put(s.getCode(), s); } private int code; - H5G_storage(int layout_type) { - this.code = layout_type; - } + H5G_storage(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5G_storage get(int code) { - return lookup.get(code); - } + public static H5G_storage get(int code) { return lookup.get(code); } } - public static void CreateGroup() { - long file_id = HDF5Constants.H5I_INVALID_HID; + public static void CreateGroup() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long group_id = HDF5Constants.H5I_INVALID_HID; - long fapl_id = HDF5Constants.H5I_INVALID_HID; + long fapl_id = HDF5Constants.H5I_INVALID_HID; H5G_info_t ginfo; long size; // Create file 1. This file will use original format groups. try { - file_id = H5.H5Fcreate (FILE1, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + file_id = H5.H5Fcreate(FILE1, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Create a group in the file1. try { - if(file_id >= 0) - group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + if (file_id >= 0) + group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -83,7 +81,7 @@ public class H5Ex_G_Compact { // Obtain the group info and print the group storage type. try { - if(group_id >= 0) { + if (group_id >= 0) { ginfo = H5.H5Gget_info(group_id); System.out.print("Group storage type for " + FILE1 + " is: "); switch (H5G_storage.get(ginfo.storage_type)) { @@ -160,7 +158,8 @@ public class H5Ex_G_Compact { try { fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS); if (fapl_id >= 0) - H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST); + H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, + HDF5Constants.H5F_LIBVER_LATEST); } catch (Exception e) { e.printStackTrace(); @@ -175,8 +174,9 @@ public class H5Ex_G_Compact { } // Create group in file2. try { - if(file_id >= 0) - group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + if (file_id >= 0) + group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -257,7 +257,5 @@ public class H5Ex_G_Compact { } } - public static void main(String[] args) { - H5Ex_G_Compact.CreateGroup(); - } + public static void main(String[] args) { H5Ex_G_Compact.CreateGroup(); } } diff --git a/java/examples/groups/H5Ex_G_Corder.java b/java/examples/groups/H5Ex_G_Corder.java index 4fa5aa2..86a790d 100644 --- a/java/examples/groups/H5Ex_G_Corder.java +++ b/java/examples/groups/H5Ex_G_Corder.java @@ -23,11 +23,12 @@ import hdf.hdf5lib.structs.H5G_info_t; public class H5Ex_G_Corder { private static String FILE = "H5Ex_G_Corder.h5"; - private static void CreateGroup() throws Exception { - long file_id = HDF5Constants.H5I_INVALID_HID; - long group_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateGroup() throws Exception + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long group_id = HDF5Constants.H5I_INVALID_HID; long subgroup_id = HDF5Constants.H5I_INVALID_HID; - long gcpl_id = HDF5Constants.H5I_INVALID_HID; + long gcpl_id = HDF5Constants.H5I_INVALID_HID; int status; H5G_info_t ginfo; int i; @@ -36,35 +37,35 @@ public class H5Ex_G_Corder { try { // Create a new file using default properties. file_id = H5.H5Fcreate(FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); // Create group creation property list and enable link creation order tracking. gcpl_id = H5.H5Pcreate(HDF5Constants.H5P_GROUP_CREATE); - status = H5.H5Pset_link_creation_order(gcpl_id, HDF5Constants.H5P_CRT_ORDER_TRACKED - + HDF5Constants.H5P_CRT_ORDER_INDEXED); + status = H5.H5Pset_link_creation_order(gcpl_id, HDF5Constants.H5P_CRT_ORDER_TRACKED + + HDF5Constants.H5P_CRT_ORDER_INDEXED); // Create primary group using the property list. if (status >= 0) group_id = H5.H5Gcreate(file_id, "index_group", HDF5Constants.H5P_DEFAULT, gcpl_id, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); try { /* - * Create subgroups in the primary group. These will be tracked by creation order. Note that these - * groups do not have to have the creation order tracking property set. + * Create subgroups in the primary group. These will be tracked by creation order. Note that + * these groups do not have to have the creation order tracking property set. */ - subgroup_id = H5.H5Gcreate(group_id, "H", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); - status = H5.H5Gclose(subgroup_id); - subgroup_id = H5.H5Gcreate(group_id, "D", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); - status = H5.H5Gclose(subgroup_id); - subgroup_id = H5.H5Gcreate(group_id, "F", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); - status = H5.H5Gclose(subgroup_id); - subgroup_id = H5.H5Gcreate(group_id, "5", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); - status = H5.H5Gclose(subgroup_id); + subgroup_id = H5.H5Gcreate(group_id, "H", HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + status = H5.H5Gclose(subgroup_id); + subgroup_id = H5.H5Gcreate(group_id, "D", HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + status = H5.H5Gclose(subgroup_id); + subgroup_id = H5.H5Gcreate(group_id, "F", HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + status = H5.H5Gclose(subgroup_id); + subgroup_id = H5.H5Gcreate(group_id, "5", HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + status = H5.H5Gclose(subgroup_id); // Get group info. ginfo = H5.H5Gget_info(group_id); @@ -73,8 +74,8 @@ public class H5Ex_G_Corder { System.out.println("Traversing group using alphabetical indices:"); for (i = 0; i < ginfo.nlinks; i++) { // Retrieve the name of the ith link in a group - name = H5.H5Lget_name_by_idx(group_id, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, - i, HDF5Constants.H5P_DEFAULT); + name = H5.H5Lget_name_by_idx(group_id, ".", HDF5Constants.H5_INDEX_NAME, + HDF5Constants.H5_ITER_INC, i, HDF5Constants.H5P_DEFAULT); System.out.println("Index " + i + ": " + name); } @@ -83,10 +84,9 @@ public class H5Ex_G_Corder { for (i = 0; i < ginfo.nlinks; i++) { // Retrieve the name of the ith link in a group name = H5.H5Lget_name_by_idx(group_id, ".", HDF5Constants.H5_INDEX_CRT_ORDER, - HDF5Constants.H5_ITER_INC, i, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5_ITER_INC, i, HDF5Constants.H5P_DEFAULT); System.out.println("Index " + i + ": " + name); } - } catch (Exception e) { e.printStackTrace(); @@ -106,7 +106,8 @@ public class H5Ex_G_Corder { } } - public static void main(String[] args) { + public static void main(String[] args) + { try { H5Ex_G_Corder.CreateGroup(); } @@ -114,5 +115,4 @@ public class H5Ex_G_Corder { ex.printStackTrace(); } } - } diff --git a/java/examples/groups/H5Ex_G_Create.java b/java/examples/groups/H5Ex_G_Create.java index 9304538..51804b9 100644 --- a/java/examples/groups/H5Ex_G_Create.java +++ b/java/examples/groups/H5Ex_G_Create.java @@ -20,17 +20,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5Ex_G_Create { - private static String FILENAME = "H5Ex_G_Create.h5"; + private static String FILENAME = "H5Ex_G_Create.h5"; private static String GROUPNAME = "G1"; - private static void CreateGroup() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateGroup() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long group_id = HDF5Constants.H5I_INVALID_HID; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -39,8 +40,8 @@ public class H5Ex_G_Create { // Create a group in the file. try { if (file_id >= 0) - group_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + group_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -81,11 +82,7 @@ public class H5Ex_G_Create { catch (Exception e) { e.printStackTrace(); } - - } - - public static void main(String[] args) { - H5Ex_G_Create.CreateGroup(); } + public static void main(String[] args) { H5Ex_G_Create.CreateGroup(); } } diff --git a/java/examples/groups/H5Ex_G_Intermediate.java b/java/examples/groups/H5Ex_G_Intermediate.java index ad0290c..e638fd0 100644 --- a/java/examples/groups/H5Ex_G_Intermediate.java +++ b/java/examples/groups/H5Ex_G_Intermediate.java @@ -16,47 +16,49 @@ ************************************************************/ package examples.groups; +import java.util.ArrayList; + import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.callbacks.H5O_iterate_t; import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t; +import hdf.hdf5lib.callbacks.H5O_iterate_t; import hdf.hdf5lib.structs.H5O_info_t; -import java.util.ArrayList; - public class H5Ex_G_Intermediate { private static String FILE = "H5Ex_G_Intermediate.h5"; - private void CreateGroup() throws Exception { + private void CreateGroup() throws Exception + { - long file_id = HDF5Constants.H5I_INVALID_HID; + long file_id = HDF5Constants.H5I_INVALID_HID; long group_id = HDF5Constants.H5I_INVALID_HID; - long gcpl_id = HDF5Constants.H5I_INVALID_HID; + long gcpl_id = HDF5Constants.H5I_INVALID_HID; try { // Create a new file_id using the default properties. file_id = H5.H5Fcreate(FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); // Create group_id creation property list and set it to allow creation of intermediate group_ids. gcpl_id = H5.H5Pcreate(HDF5Constants.H5P_LINK_CREATE); H5.H5Pset_create_intermediate_group(gcpl_id, true); /* - * Create the group_id /G1/G2/G3. Note that /G1 and /G1/G2 do not exist yet. This call would cause an error - * if we did not use the previously created property list. + * Create the group_id /G1/G2/G3. Note that /G1 and /G1/G2 do not exist yet. This call would cause + * an error if we did not use the previously created property list. */ - group_id = H5 - .H5Gcreate(file_id, "/G1/G2/G3", gcpl_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + group_id = H5.H5Gcreate(file_id, "/G1/G2/G3", gcpl_id, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); // Print all the objects in the file_ids to show that intermediate group_ids have been created. System.out.println("Objects in the file_id:"); // H5O_iterate_opdata_t iter_data = null; H5O_iterate_opdata_t iter_data = new H5O_iter_data(); - H5O_iterate_t iter_cb = new H5O_iter_callback(); + H5O_iterate_t iter_cb = new H5O_iter_callback(); - H5.H5Ovisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb, iter_data); + H5.H5Ovisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb, + iter_data); } catch (Exception e) { e.printStackTrace(); @@ -72,7 +74,8 @@ public class H5Ex_G_Intermediate { } } - public static void main(String[] args) { + public static void main(String[] args) + { try { (new H5Ex_G_Intermediate()).CreateGroup(); } @@ -83,9 +86,10 @@ public class H5Ex_G_Intermediate { private class idata { public String link_name = null; - public int link_type = -1; + public int link_type = -1; - idata(String name, int type) { + idata(String name, int type) + { this.link_name = name; this.link_type = type; } @@ -96,9 +100,10 @@ public class H5Ex_G_Intermediate { } private class H5O_iter_callback implements H5O_iterate_t { - public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) { + public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) + { idata id = new idata(name, info.type); - ((H5O_iter_data) op_data).iterdata.add(id); + ((H5O_iter_data)op_data).iterdata.add(id); System.out.print("/"); /* Print root group in object path */ @@ -118,5 +123,4 @@ public class H5Ex_G_Intermediate { return 0; } } - } diff --git a/java/examples/groups/H5Ex_G_Iterate.java b/java/examples/groups/H5Ex_G_Iterate.java index 6caecac..24cbb0a 100644 --- a/java/examples/groups/H5Ex_G_Iterate.java +++ b/java/examples/groups/H5Ex_G_Iterate.java @@ -16,47 +16,43 @@ ************************************************************/ package examples.groups; -import hdf.hdf5lib.H5; -import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.structs.H5O_token_t; - import java.util.EnumSet; import java.util.HashMap; import java.util.Map; +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; +import hdf.hdf5lib.structs.H5O_token_t; + public class H5Ex_G_Iterate { - private static String FILENAME = "groups/h5ex_g_iterate.h5"; + private static String FILENAME = "groups/h5ex_g_iterate.h5"; private static String DATASETNAME = "/"; enum H5O_type { - H5O_TYPE_UNKNOWN(-1), // Unknown object type - H5O_TYPE_GROUP(0), // Object is a group - H5O_TYPE_DATASET(1), // Object is a dataset + H5O_TYPE_UNKNOWN(-1), // Unknown object type + H5O_TYPE_GROUP(0), // Object is a group + H5O_TYPE_DATASET(1), // Object is a dataset H5O_TYPE_NAMED_DATATYPE(2), // Object is a named data type - H5O_TYPE_NTYPES(3); // Number of different object types + H5O_TYPE_NTYPES(3); // Number of different object types private static final Map lookup = new HashMap(); - static { + static + { for (H5O_type s : EnumSet.allOf(H5O_type.class)) lookup.put(s.getCode(), s); } private int code; - H5O_type(int layout_type) { - this.code = layout_type; - } + H5O_type(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5O_type get(int code) { - return lookup.get(code); - } + public static H5O_type get(int code) { return lookup.get(code); } } - private static void do_iterate() { + private static void do_iterate() + { long file_id = HDF5Constants.H5I_INVALID_HID; // Open a file using default properties. @@ -71,12 +67,13 @@ public class H5Ex_G_Iterate { System.out.println("Objects in root group:"); try { if (file_id >= 0) { - int count = (int) H5.H5Gn_members(file_id, DATASETNAME); - String[] oname = new String[count]; - int[] otype = new int[count]; - int[] ltype = new int[count]; + int count = (int)H5.H5Gn_members(file_id, DATASETNAME); + String[] oname = new String[count]; + int[] otype = new int[count]; + int[] ltype = new int[count]; H5O_token_t[] otokens = new H5O_token_t[count]; - H5.H5Gget_obj_info_all(file_id, DATASETNAME, oname, otype, ltype, otokens, HDF5Constants.H5_INDEX_NAME); + H5.H5Gget_obj_info_all(file_id, DATASETNAME, oname, otype, ltype, otokens, + HDF5Constants.H5_INDEX_NAME); // Get type of the object and display its name and type. for (int indx = 0; indx < otype.length; indx++) { @@ -110,8 +107,5 @@ public class H5Ex_G_Iterate { } } - public static void main(String[] args) { - H5Ex_G_Iterate.do_iterate(); - } - + public static void main(String[] args) { H5Ex_G_Iterate.do_iterate(); } } diff --git a/java/examples/groups/H5Ex_G_Phase.java b/java/examples/groups/H5Ex_G_Phase.java index 67a2f53..7a3fba3 100644 --- a/java/examples/groups/H5Ex_G_Phase.java +++ b/java/examples/groups/H5Ex_G_Phase.java @@ -16,19 +16,19 @@ ************************************************************/ package examples.groups; -import hdf.hdf5lib.H5; -import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.structs.H5G_info_t; - import java.util.EnumSet; import java.util.HashMap; import java.util.Map; +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; +import hdf.hdf5lib.structs.H5G_info_t; + public class H5Ex_G_Phase { - private static String FILE = "H5Ex_G_Phase.h5"; - private static int MAX_GROUPS = 7; + private static String FILE = "H5Ex_G_Phase.h5"; + private static int MAX_GROUPS = 7; private static int MAX_COMPACT = 5; - private static int MIN_DENSE = 3; + private static int MIN_DENSE = 3; enum H5G_storage { H5G_STORAGE_TYPE_UNKNOWN(-1), @@ -38,42 +38,39 @@ public class H5Ex_G_Phase { private static final Map lookup = new HashMap(); - static { + static + { for (H5G_storage s : EnumSet.allOf(H5G_storage.class)) lookup.put(s.getCode(), s); } private int code; - H5G_storage(int layout_type) { - this.code = layout_type; - } + H5G_storage(int layout_type) { this.code = layout_type; } - public int getCode() { - return this.code; - } + public int getCode() { return this.code; } - public static H5G_storage get(int code) { - return lookup.get(code); - } + public static H5G_storage get(int code) { return lookup.get(code); } } - private static void CreateGroup() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long group_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateGroup() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long group_id = HDF5Constants.H5I_INVALID_HID; long subgroup_id = HDF5Constants.H5I_INVALID_HID; - long fapl_id = HDF5Constants.H5I_INVALID_HID; - long gcpl_id = HDF5Constants.H5I_INVALID_HID; + long fapl_id = HDF5Constants.H5I_INVALID_HID; + long gcpl_id = HDF5Constants.H5I_INVALID_HID; H5G_info_t ginfo; String name = "G0"; // Name of subgroup_id int i; - // Set file access property list to allow the latest file format.This will allow the library to create new - // format groups. + // Set file access property list to allow the latest file format.This will allow the library to create + // new format groups. try { fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS); if (fapl_id >= 0) - H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST); + H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, + HDF5Constants.H5F_LIBVER_LATEST); } catch (Exception e) { e.printStackTrace(); @@ -101,21 +98,23 @@ public class H5Ex_G_Phase { // Create primary group. try { if ((file_id >= 0) && (gcpl_id >= 0)) - group_id = H5.H5Gcreate(file_id, name, HDF5Constants.H5P_DEFAULT, gcpl_id, HDF5Constants.H5P_DEFAULT); + group_id = H5.H5Gcreate(file_id, name, HDF5Constants.H5P_DEFAULT, gcpl_id, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } - // Add subgroups to "group" one at a time, print the storage type for "group" after each subgroup is created. + // Add subgroups to "group" one at a time, print the storage type for "group" after each subgroup is + // created. for (i = 1; i <= MAX_GROUPS; i++) { // Define the subgroup name and create the subgroup. - char append = (char) (((char) i) + '0'); - name = name + append; /* G1, G2, G3 etc. */ + char append = (char)(((char)i) + '0'); + name = name + append; /* G1, G2, G3 etc. */ try { if (group_id >= 0) { - subgroup_id = H5.H5Gcreate(group_id, name, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + subgroup_id = H5.H5Gcreate(group_id, name, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); H5.H5Gclose(subgroup_id); } } @@ -127,7 +126,8 @@ public class H5Ex_G_Phase { try { if (group_id >= 0) { ginfo = H5.H5Gget_info(group_id); - System.out.print(ginfo.nlinks + " Group" + (ginfo.nlinks == 1 ? " " : "s") + ": Storage type is "); + System.out.print(ginfo.nlinks + " Group" + (ginfo.nlinks == 1 ? " " : "s") + + ": Storage type is "); switch (H5G_storage.get(ginfo.storage_type)) { case H5G_STORAGE_TYPE_COMPACT: System.out.println("H5G_STORAGE_TYPE_COMPACT"); // New compact format @@ -169,7 +169,8 @@ public class H5Ex_G_Phase { try { if (group_id >= 0) { ginfo = H5.H5Gget_info(group_id); - System.out.print(ginfo.nlinks + " Group" + (ginfo.nlinks == 1 ? " " : "s") + ": Storage type is "); + System.out.print(ginfo.nlinks + " Group" + (ginfo.nlinks == 1 ? " " : "s") + + ": Storage type is "); switch (H5G_storage.get(ginfo.storage_type)) { case H5G_STORAGE_TYPE_COMPACT: System.out.println("H5G_STORAGE_TYPE_COMPACT"); // New compact format @@ -228,11 +229,7 @@ public class H5Ex_G_Phase { catch (Exception e) { e.printStackTrace(); } - - } - - public static void main(String[] args) { - H5Ex_G_Phase.CreateGroup(); } + public static void main(String[] args) { H5Ex_G_Phase.CreateGroup(); } } diff --git a/java/examples/groups/H5Ex_G_Traverse.java b/java/examples/groups/H5Ex_G_Traverse.java index c5b6373..cd60f6b 100644 --- a/java/examples/groups/H5Ex_G_Traverse.java +++ b/java/examples/groups/H5Ex_G_Traverse.java @@ -24,10 +24,11 @@ package examples.groups; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t; +import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.structs.H5L_info_t; import hdf.hdf5lib.structs.H5O_info_t; + import examples.groups.H5Ex_G_Iterate.H5O_type; class opdata implements H5L_iterate_opdata_t { @@ -38,10 +39,11 @@ class opdata implements H5L_iterate_opdata_t { public class H5Ex_G_Traverse { - private static String FILE = "h5ex_g_traverse.h5"; + private static String FILE = "h5ex_g_traverse.h5"; public static H5L_iterate_t iter_cb = new H5L_iter_callbackT(); - private static void OpenGroup() { + private static void OpenGroup() + { long file_id = HDF5Constants.H5I_INVALID_HID; H5O_info_t infobuf; opdata od = new opdata(); @@ -50,9 +52,9 @@ public class H5Ex_G_Traverse { try { file_id = H5.H5Fopen(FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT); if (file_id >= 0) { - infobuf = H5.H5Oget_info(file_id); - od.recurs = 0; - od.prev = null; + infobuf = H5.H5Oget_info(file_id); + od.recurs = 0; + od.prev = null; od.obj_token = infobuf.token; } } @@ -64,7 +66,8 @@ public class H5Ex_G_Traverse { try { System.out.println("/ {"); // H5L_iterate_t iter_cb = new H5L_iter_callbackT(); - H5.H5Literate(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, 0L, iter_cb, od); + H5.H5Literate(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, 0L, iter_cb, + od); System.out.println("}"); } catch (Exception e) { @@ -81,18 +84,17 @@ public class H5Ex_G_Traverse { } } - public static void main(String[] args) { - H5Ex_G_Traverse.OpenGroup(); - } + public static void main(String[] args) { H5Ex_G_Traverse.OpenGroup(); } } class H5L_iter_callbackT implements H5L_iterate_t { - public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { + public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) + { H5O_info_t infobuf; int return_val = 0; - opdata od = (opdata) op_data; // Type conversion - int spaces = 2 * (od.recurs + 1); // Number of white spaces to prepend to output. + opdata od = (opdata)op_data; // Type conversion + int spaces = 2 * (od.recurs + 1); // Number of white spaces to prepend to output. // Get type of the object and display its name and type. // The name of the object is passed to this function by the Library. @@ -123,13 +125,14 @@ class H5L_iter_callbackT implements H5L_iterate_t { // recursive iteration on the discovered // group. The new opdata is given a pointer to the // current one. - opdata nextod = new opdata(); - nextod.recurs = od.recurs + 1; - nextod.prev = od; - nextod.obj_token = infobuf.token; + opdata nextod = new opdata(); + nextod.recurs = od.recurs + 1; + nextod.prev = od; + nextod.obj_token = infobuf.token; H5L_iterate_t iter_cb2 = new H5L_iter_callbackT(); - return_val = H5.H5Literate_by_name(group, name, HDF5Constants.H5_INDEX_NAME, - HDF5Constants.H5_ITER_NATIVE, 0L, iter_cb2, nextod, HDF5Constants.H5P_DEFAULT); + return_val = H5.H5Literate_by_name(group, name, HDF5Constants.H5_INDEX_NAME, + HDF5Constants.H5_ITER_NATIVE, 0L, iter_cb2, nextod, + HDF5Constants.H5P_DEFAULT); } for (int i = 0; i < spaces; i++) System.out.print(" "); @@ -152,7 +155,8 @@ class H5L_iter_callbackT implements H5L_iterate_t { return return_val; } - public boolean group_check(opdata od, H5O_token_t target_token) { + public boolean group_check(opdata od, H5O_token_t target_token) + { if (od.obj_token.equals(target_token)) return true; // Object tokens match else if (od.recurs == 0) @@ -160,5 +164,4 @@ class H5L_iter_callbackT implements H5L_iterate_t { else return group_check(od.prev, target_token); // Recursively examine the next node } - } diff --git a/java/examples/groups/H5Ex_G_Visit.java b/java/examples/groups/H5Ex_G_Visit.java index 790be80..d14ded6 100644 --- a/java/examples/groups/H5Ex_G_Visit.java +++ b/java/examples/groups/H5Ex_G_Visit.java @@ -20,22 +20,23 @@ ************************************************************/ package examples.groups; +import java.util.ArrayList; + import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; -import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t; -import hdf.hdf5lib.callbacks.H5O_iterate_t; +import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t; +import hdf.hdf5lib.callbacks.H5O_iterate_t; import hdf.hdf5lib.structs.H5L_info_t; import hdf.hdf5lib.structs.H5O_info_t; -import java.util.ArrayList; - public class H5Ex_G_Visit { private static String FILE = "groups/h5ex_g_visit.h5"; - public static void main(String[] args) { + public static void main(String[] args) + { try { (new H5Ex_G_Visit()).VisitGroup(); } @@ -44,7 +45,8 @@ public class H5Ex_G_Visit { } } - private void VisitGroup() throws Exception { + private void VisitGroup() throws Exception + { long file_id = HDF5Constants.H5I_INVALID_HID; @@ -55,15 +57,16 @@ public class H5Ex_G_Visit { // Begin iteration using H5Ovisit System.out.println("Objects in the file:"); H5O_iterate_opdata_t iter_data = new H5O_iter_data(); - H5O_iterate_t iter_cb = new H5O_iter_callback(); - H5.H5Ovisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb, iter_data); + H5O_iterate_t iter_cb = new H5O_iter_callback(); + H5.H5Ovisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb, + iter_data); System.out.println(); // Repeat the same process using H5Lvisit H5L_iterate_opdata_t iter_data2 = new H5L_iter_data(); - H5L_iterate_t iter_cb2 = new H5L_iter_callback(); + H5L_iterate_t iter_cb2 = new H5L_iter_callback(); System.out.println("Links in the file:"); - H5.H5Lvisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb2, iter_data2); - + H5.H5Lvisit(file_id, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_NATIVE, iter_cb2, + iter_data2); } catch (Exception e) { e.printStackTrace(); @@ -76,15 +79,16 @@ public class H5Ex_G_Visit { } /************************************************************ - * Operator function for H5Lvisit. This function simply retrieves the info for the object the current link points - * to, and calls the operator function for H5Ovisit. + * Operator function for H5Lvisit. This function simply retrieves the info for the object the current link + *points to, and calls the operator function for H5Ovisit. ************************************************************/ private class idata { public String link_name = null; - public int link_type = -1; + public int link_type = -1; - idata(String name, int type) { + idata(String name, int type) + { this.link_name = name; this.link_type = type; } @@ -95,20 +99,21 @@ public class H5Ex_G_Visit { } private class H5L_iter_callback implements H5L_iterate_t { - public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { + public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) + { idata id = new idata(name, info.type); - ((H5L_iter_data) op_data).iterdata.add(id); + ((H5L_iter_data)op_data).iterdata.add(id); H5O_info_t infobuf; int ret = 0; try { - // Get type of the object and display its name and type. The name of the object is passed to this - // function by the Library. - infobuf = H5.H5Oget_info_by_name(group, name, HDF5Constants.H5P_DEFAULT); + // Get type of the object and display its name and type. The name of the object is passed to + // this function by the Library. + infobuf = H5.H5Oget_info_by_name(group, name, HDF5Constants.H5P_DEFAULT); H5O_iterate_t iter_cbO = new H5O_iter_callback(); H5O_iterate_opdata_t iter_dataO = new H5O_iter_data(); - ret = iter_cbO.callback(group, name, infobuf, iter_dataO); + ret = iter_cbO.callback(group, name, infobuf, iter_dataO); } catch (Exception e) { e.printStackTrace(); @@ -123,9 +128,10 @@ public class H5Ex_G_Visit { } private class H5O_iter_callback implements H5O_iterate_t { - public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) { + public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) + { idata id = new idata(name, info.type); - ((H5O_iter_data) op_data).iterdata.add(id); + ((H5O_iter_data)op_data).iterdata.add(id); System.out.print("/"); /* Print root group in object path */ @@ -145,5 +151,4 @@ public class H5Ex_G_Visit { return 0; } } - } diff --git a/java/examples/groups/JavaGroupExample.sh.in b/java/examples/groups/JavaGroupExample.sh.in index 86f90bf..1b84ed3 100644 --- a/java/examples/groups/JavaGroupExample.sh.in +++ b/java/examples/groups/JavaGroupExample.sh.in @@ -26,6 +26,7 @@ CMP='cmp' DIFF='diff -c' CP='cp' DIRNAME='dirname' +BASENAME='basename' LS='ls' AWK='awk' @@ -95,17 +96,21 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." # Comment out this to CREATE expected file exit $EXIT_FAILURE fi + BNAME=`$BASENAME $tstfile` + if [ "$BNAME" = "libhdf5_java.dylib" ]; then + COPIED_LIBHDF5_JAVA=1 + fi fi fi done - if [ "$IS_DARWIN" = "yes" ]; then + if [[ "$IS_DARWIN" = "yes" ]] && [[ $COPIED_LIBHDF5_JAVA -eq 1 ]]; then (cd $BLDLIBDIR; \ install_name_tool -add_rpath @loader_path libhdf5_java.dylib; \ exist_path=` otool -l libhdf5_java.dylib | grep libhdf5 | grep -v java | awk '{print $2}'`; \ @@ -126,7 +131,7 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." @@ -147,10 +152,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - for tstfile in $COPY_JARTESTFILES - do - $RM $BLDLIBDIR/tstfile - done + $RM -rf $BLDLIBDIR fi } diff --git a/java/examples/intro/CMakeLists.txt b/java/examples/intro/CMakeLists.txt index 867740b..a5e2a67 100644 --- a/java/examples/intro/CMakeLists.txt +++ b/java/examples/intro/CMakeLists.txt @@ -36,6 +36,13 @@ foreach (example ${HDF_JAVA_EXAMPLES}) # install_jar (${example} ${HJAVA_INSTALL_DATA_DIR}/examples examples) get_target_property (${example}_CLASSPATH ${example} CLASSDIR) add_dependencies (${example} ${HDF5_JAVA_HDF5_LIB_TARGET}) + + #----------------------------------------------------------------------------- + # Add Target to clang-format + #----------------------------------------------------------------------------- + if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_JAVA_${example}_SRC_FORMAT ${example}.java) + endif () endforeach () set (CMAKE_JAVA_INCLUDE_PATH "${HDF5_JAVA_JARS};${HDF5_JAVA_LOGGING_JAR};${HDF5_JAVA_LOGGING_NOP_JAR}") diff --git a/java/examples/intro/H5_CreateAttribute.java b/java/examples/intro/H5_CreateAttribute.java index 949a770..22ecdae 100644 --- a/java/examples/intro/H5_CreateAttribute.java +++ b/java/examples/intro/H5_CreateAttribute.java @@ -20,25 +20,26 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_CreateAttribute { - private static String FILENAME = "H5_CreateAttribute.h5"; - private static String DATASETNAME = "dset"; - private static final int DIM_X = 4; - private static final int DIM_Y = 6; + private static String FILENAME = "H5_CreateAttribute.h5"; + private static String DATASETNAME = "dset"; + private static final int DIM_X = 4; + private static final int DIM_Y = 6; private static String DATASETATTRIBUTE = "Units"; - private static void CreateDatasetAttribute() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDatasetAttribute() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; long attribute_id = HDF5Constants.H5I_INVALID_HID; - long[] dims1 = { DIM_X, DIM_Y }; - long[] dims = { 2 }; - int[] attr_data = { 100, 200 }; + long[] dims1 = {DIM_X, DIM_Y}; + long[] dims = {2}; + int[] attr_data = {100, 200}; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -55,8 +56,9 @@ public class H5_CreateAttribute { // Create the dataset. try { if ((file_id >= 0) && (dataspace_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, "/" + DATASETNAME, HDF5Constants.H5T_STD_I32BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = H5.H5Dcreate(file_id, "/" + DATASETNAME, HDF5Constants.H5T_STD_I32BE, + dataspace_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -82,8 +84,9 @@ public class H5_CreateAttribute { // Create a dataset attribute. try { if ((dataset_id >= 0) && (dataspace_id >= 0)) - attribute_id = H5.H5Acreate(dataset_id, DATASETATTRIBUTE, HDF5Constants.H5T_STD_I32BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + attribute_id = + H5.H5Acreate(dataset_id, DATASETATTRIBUTE, HDF5Constants.H5T_STD_I32BE, dataspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -135,8 +138,5 @@ public class H5_CreateAttribute { } } - public static void main(String[] args) { - H5_CreateAttribute.CreateDatasetAttribute(); - } - + public static void main(String[] args) { H5_CreateAttribute.CreateDatasetAttribute(); } } diff --git a/java/examples/intro/H5_CreateDataset.java b/java/examples/intro/H5_CreateDataset.java index f938be2..20683e8 100644 --- a/java/examples/intro/H5_CreateDataset.java +++ b/java/examples/intro/H5_CreateDataset.java @@ -20,21 +20,22 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_CreateDataset { - private static String FILENAME = "H5_CreateDataset.h5"; + private static String FILENAME = "H5_CreateDataset.h5"; private static String DATASETNAME = "dset"; - private static final int DIM_X = 4; - private static final int DIM_Y = 6; + private static final int DIM_X = 4; + private static final int DIM_Y = 6; - private static void CreateDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -51,8 +52,9 @@ public class H5_CreateDataset { // Create the dataset. try { if ((file_id >= 0) && (dataspace_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, "/" + DATASETNAME, HDF5Constants.H5T_STD_I32BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = H5.H5Dcreate(file_id, "/" + DATASETNAME, HDF5Constants.H5T_STD_I32BE, + dataspace_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -84,11 +86,7 @@ public class H5_CreateDataset { catch (Exception e) { e.printStackTrace(); } - - } - - public static void main(String[] args) { - H5_CreateDataset.CreateDataset(); } + public static void main(String[] args) { H5_CreateDataset.CreateDataset(); } } diff --git a/java/examples/intro/H5_CreateFile.java b/java/examples/intro/H5_CreateFile.java index d48ba6c..4323581 100644 --- a/java/examples/intro/H5_CreateFile.java +++ b/java/examples/intro/H5_CreateFile.java @@ -22,13 +22,14 @@ import hdf.hdf5lib.HDF5Constants; public class H5_CreateFile { static final String FILENAME = "H5_CreateFile.h5"; - private static void CreateFile() { + private static void CreateFile() + { long file_id = HDF5Constants.H5I_INVALID_HID; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -42,11 +43,7 @@ public class H5_CreateFile { catch (Exception e) { e.printStackTrace(); } - - } - - public static void main(String[] args) { - H5_CreateFile.CreateFile(); } + public static void main(String[] args) { H5_CreateFile.CreateFile(); } } diff --git a/java/examples/intro/H5_CreateGroup.java b/java/examples/intro/H5_CreateGroup.java index c0bb954..a276cbd 100644 --- a/java/examples/intro/H5_CreateGroup.java +++ b/java/examples/intro/H5_CreateGroup.java @@ -20,17 +20,18 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_CreateGroup { - private static String FILENAME = "H5_CreateGroup.h5"; + private static String FILENAME = "H5_CreateGroup.h5"; private static String GROUPNAME = "MyGroup"; - private static void CreateGroup() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateGroup() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long group_id = HDF5Constants.H5I_INVALID_HID; // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -39,8 +40,8 @@ public class H5_CreateGroup { // Create a group in the file. try { if (file_id >= 0) - group_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + group_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -63,11 +64,7 @@ public class H5_CreateGroup { catch (Exception e) { e.printStackTrace(); } - - } - - public static void main(String[] args) { - H5_CreateGroup.CreateGroup(); } + public static void main(String[] args) { H5_CreateGroup.CreateGroup(); } } diff --git a/java/examples/intro/H5_CreateGroupAbsoluteRelative.java b/java/examples/intro/H5_CreateGroupAbsoluteRelative.java index f2c6168..2fb9c3c 100644 --- a/java/examples/intro/H5_CreateGroupAbsoluteRelative.java +++ b/java/examples/intro/H5_CreateGroupAbsoluteRelative.java @@ -20,13 +20,14 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_CreateGroupAbsoluteRelative { - private static String FILENAME = "H5_CreateGroupAbsoluteRelative.h5"; - private static String GROUPNAME = "MyGroup"; + private static String FILENAME = "H5_CreateGroupAbsoluteRelative.h5"; + private static String GROUPNAME = "MyGroup"; private static String GROUPNAME_A = "GroupA"; private static String GROUPNAME_B = "GroupB"; - private static void CreateGroupAbsoluteAndRelative() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void CreateGroupAbsoluteAndRelative() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long group1_id = HDF5Constants.H5I_INVALID_HID; long group2_id = HDF5Constants.H5I_INVALID_HID; long group3_id = HDF5Constants.H5I_INVALID_HID; @@ -34,7 +35,7 @@ public class H5_CreateGroupAbsoluteRelative { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -44,7 +45,7 @@ public class H5_CreateGroupAbsoluteRelative { try { if (file_id >= 0) group1_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -53,8 +54,9 @@ public class H5_CreateGroupAbsoluteRelative { // Create group "Group_A" in group "MyGroup" using absolute name. try { if (file_id >= 0) - group2_id = H5.H5Gcreate(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + group2_id = + H5.H5Gcreate(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -63,8 +65,8 @@ public class H5_CreateGroupAbsoluteRelative { // Create group "Group_B" in group "MyGroup" using relative name. try { if (group1_id >= 0) - group3_id = H5.H5Gcreate(group1_id, GROUPNAME_B, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + group3_id = H5.H5Gcreate(group1_id, GROUPNAME_B, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -105,11 +107,10 @@ public class H5_CreateGroupAbsoluteRelative { catch (Exception e) { e.printStackTrace(); } - } - public static void main(String[] args) { + public static void main(String[] args) + { H5_CreateGroupAbsoluteRelative.CreateGroupAbsoluteAndRelative(); } - } diff --git a/java/examples/intro/H5_CreateGroupDataset.java b/java/examples/intro/H5_CreateGroupDataset.java index f1d1cba..1d7cf99 100644 --- a/java/examples/intro/H5_CreateGroupDataset.java +++ b/java/examples/intro/H5_CreateGroupDataset.java @@ -20,27 +20,28 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_CreateGroupDataset { - private static String FILENAME = "H5_CreateGroupDataset.h5"; - private static String GROUPNAME = "MyGroup"; - private static String GROUPNAME_A = "GroupA"; + private static String FILENAME = "H5_CreateGroupDataset.h5"; + private static String GROUPNAME = "MyGroup"; + private static String GROUPNAME_A = "GroupA"; private static String DATASETNAME1 = "dset1"; private static String DATASETNAME2 = "dset2"; - private static final int DIM1_X = 3; - private static final int DIM1_Y = 3; - private static final int DIM2_X = 2; - private static final int DIM2_Y = 10; - - private static void h5_crtgrpd() { - long file_id = HDF5Constants.H5I_INVALID_HID; - long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long group_id = HDF5Constants.H5I_INVALID_HID; - long group1_id = HDF5Constants.H5I_INVALID_HID; - long group2_id = HDF5Constants.H5I_INVALID_HID; + private static final int DIM1_X = 3; + private static final int DIM1_Y = 3; + private static final int DIM2_X = 2; + private static final int DIM2_Y = 10; + + private static void h5_crtgrpd() + { + long file_id = HDF5Constants.H5I_INVALID_HID; + long dataspace_id = HDF5Constants.H5I_INVALID_HID; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long group_id = HDF5Constants.H5I_INVALID_HID; + long group1_id = HDF5Constants.H5I_INVALID_HID; + long group2_id = HDF5Constants.H5I_INVALID_HID; int[][] dset1_data = new int[DIM1_X][DIM1_Y]; int[][] dset2_data = new int[DIM2_X][DIM2_Y]; - long[] dims1 = { DIM1_X, DIM1_Y }; - long[] dims2 = { DIM2_X, DIM2_Y }; + long[] dims1 = {DIM1_X, DIM1_Y}; + long[] dims2 = {DIM2_X, DIM2_Y}; // Initialize the first dataset. for (int indx = 0; indx < DIM1_X; indx++) @@ -55,15 +56,16 @@ public class H5_CreateGroupDataset { // Create a file. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); // Create a group named "/MyGroup" in the file. if (file_id >= 0) { group1_id = H5.H5Gcreate(file_id, "/" + GROUPNAME, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); // Create group "Group_A" in group "MyGroup" using absolute name. if (group1_id >= 0) { - group2_id = H5.H5Gcreate(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + group2_id = + H5.H5Gcreate(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (group2_id >= 0) H5.H5Gclose(group2_id); } @@ -86,8 +88,9 @@ public class H5_CreateGroupDataset { // Create the dataset in group "MyGroup". try { if ((file_id >= 0) && (dataspace_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, "/" + GROUPNAME + "/" + DATASETNAME1, HDF5Constants.H5T_STD_I32BE, - dataspace_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = H5.H5Dcreate( + file_id, "/" + GROUPNAME + "/" + DATASETNAME1, HDF5Constants.H5T_STD_I32BE, dataspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -96,8 +99,8 @@ public class H5_CreateGroupDataset { // Write the first dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset1_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset1_data); } catch (Exception e) { e.printStackTrace(); @@ -126,7 +129,8 @@ public class H5_CreateGroupDataset { // Open an existing group of the specified file. try { if (file_id >= 0) - group_id = H5.H5Gopen(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT); + group_id = + H5.H5Gopen(file_id, "/" + GROUPNAME + "/" + GROUPNAME_A, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -144,7 +148,8 @@ public class H5_CreateGroupDataset { try { if ((group_id >= 0) && (dataspace_id >= 0)) dataset_id = H5.H5Dcreate(group_id, DATASETNAME2, HDF5Constants.H5T_STD_I32BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -153,8 +158,8 @@ public class H5_CreateGroupDataset { // Write the second dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset2_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset2_data); } catch (Exception e) { e.printStackTrace(); @@ -197,8 +202,5 @@ public class H5_CreateGroupDataset { } } - public static void main(String[] args) { - H5_CreateGroupDataset.h5_crtgrpd(); - } - + public static void main(String[] args) { H5_CreateGroupDataset.h5_crtgrpd(); } } diff --git a/java/examples/intro/H5_ReadWrite.java b/java/examples/intro/H5_ReadWrite.java index 67e1ac5..379fe20 100644 --- a/java/examples/intro/H5_ReadWrite.java +++ b/java/examples/intro/H5_ReadWrite.java @@ -20,16 +20,17 @@ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; public class H5_ReadWrite { - private static String FILENAME = "H5_ReadWrite.h5"; + private static String FILENAME = "H5_ReadWrite.h5"; private static String DATASETNAME = "dset"; - private static final int DIM_X = 4; - private static final int DIM_Y = 6; + private static final int DIM_X = 4; + private static final int DIM_Y = 6; - private static void ReadWriteDataset() { - long file_id = HDF5Constants.H5I_INVALID_HID; + private static void ReadWriteDataset() + { + long file_id = HDF5Constants.H5I_INVALID_HID; long dataspace_id = HDF5Constants.H5I_INVALID_HID; - long dataset_id = HDF5Constants.H5I_INVALID_HID; - long[] dims = { DIM_X, DIM_Y }; + long dataset_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {DIM_X, DIM_Y}; int[][] dset_data = new int[DIM_X][DIM_Y]; // Initialize the dataset. @@ -40,7 +41,7 @@ public class H5_ReadWrite { // Create a new file using default properties. try { file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, - HDF5Constants.H5P_DEFAULT); + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -57,8 +58,9 @@ public class H5_ReadWrite { // Create the dataset. try { if ((file_id >= 0) && (dataspace_id >= 0)) - dataset_id = H5.H5Dcreate(file_id, "/" + DATASETNAME, HDF5Constants.H5T_STD_I32BE, dataspace_id, - HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + dataset_id = H5.H5Dcreate(file_id, "/" + DATASETNAME, HDF5Constants.H5T_STD_I32BE, + dataspace_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, + HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); @@ -67,8 +69,8 @@ public class H5_ReadWrite { // Write the dataset. try { if (dataset_id >= 0) - H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -76,8 +78,8 @@ public class H5_ReadWrite { try { if (dataset_id >= 0) - H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, - HDF5Constants.H5P_DEFAULT, dset_data); + H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, + HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data); } catch (Exception e) { e.printStackTrace(); @@ -102,8 +104,5 @@ public class H5_ReadWrite { } } - public static void main(String[] args) { - H5_ReadWrite.ReadWriteDataset(); - } - + public static void main(String[] args) { H5_ReadWrite.ReadWriteDataset(); } } diff --git a/java/examples/intro/JavaIntroExample.sh.in b/java/examples/intro/JavaIntroExample.sh.in index a095f27..41ed694 100644 --- a/java/examples/intro/JavaIntroExample.sh.in +++ b/java/examples/intro/JavaIntroExample.sh.in @@ -26,6 +26,7 @@ CMP='cmp' DIFF='diff -c' CP='cp' DIRNAME='dirname' +BASENAME='basename' LS='ls' AWK='awk' @@ -89,17 +90,21 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." # Comment out this to CREATE expected file exit $EXIT_FAILURE fi + BNAME=`$BASENAME $tstfile` + if [ "$BNAME" = "libhdf5_java.dylib" ]; then + COPIED_LIBHDF5_JAVA=1 + fi fi fi done - if [ "$IS_DARWIN" = "yes" ]; then + if [[ "$IS_DARWIN" = "yes" ]] && [[ $COPIED_LIBHDF5_JAVA -eq 1 ]]; then (cd $BLDLIBDIR; \ install_name_tool -add_rpath @loader_path libhdf5_java.dylib; \ exist_path=` otool -l libhdf5_java.dylib | grep libhdf5 | grep -v java | awk '{print $2}'`; \ @@ -120,7 +125,7 @@ COPY_LIBFILES_TO_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $BLDLIBDIR + $CP -fR $tstfile $BLDLIBDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." @@ -141,10 +146,7 @@ CLEAN_LIBFILES_AND_BLDLIBDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - for tstfile in $COPY_JARTESTFILES - do - $RM $BLDLIBDIR/tstfile - done + $RM -rf $BLDLIBDIR fi } diff --git a/java/src/hdf/hdf5lib/CMakeLists.txt b/java/src/hdf/hdf5lib/CMakeLists.txt index a26e117..0b716f7 100644 --- a/java/src/hdf/hdf5lib/CMakeLists.txt +++ b/java/src/hdf/hdf5lib/CMakeLists.txt @@ -132,6 +132,9 @@ SET_GLOBAL_VARIABLE (HDF5_JAVA_JARS ${${HDF5_JAVA_HDF5_LIB_TARGET}_JAR_FILE}) add_dependencies (${HDF5_JAVA_HDF5_LIB_TARGET} ${HDF5_JAVA_JNI_LIB_TARGET}) set_target_properties (${HDF5_JAVA_HDF5_LIB_TARGET} PROPERTIES FOLDER libraries/java) +if (HDF5_ENABLE_FORMATTERS) + clang_format (HDF5_JAVA_SRC_FORMAT ${HDF5_JAVA_HDF_HDF5_CALLBACKS_SOURCES} ${HDF5_JAVA_HDF_HDF5_EXCEPTIONS_SOURCES} ${HDF5_JAVA_HDF_HDF5_STRUCTS_SOURCES} ${HDF5_JAVA_HDF_HDF5_SOURCES}) +endif () create_javadoc(hdf5_java_doc FILES ${HDF5_JAVADOC_HDF_HDF5_CALLBACKS_SOURCES} ${HDF5_JAVADOC_HDF_HDF5_EXCEPTIONS_SOURCES} ${HDF5_JAVADOC_HDF_HDF5_STRUCTS_SOURCES} ${HDF5_JAVADOC_HDF_HDF5_SOURCES} diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java index 3180ede..9fac20c 100644 --- a/java/src/hdf/hdf5lib/H5.java +++ b/java/src/hdf/hdf5lib/H5.java @@ -11,47 +11,47 @@ * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ - package hdf.hdf5lib; import java.io.File; import java.nio.ByteBuffer; import java.util.Collection; import java.util.LinkedHashSet; + import hdf.hdf5lib.callbacks.H5A_iterate_cb; import hdf.hdf5lib.callbacks.H5A_iterate_t; import hdf.hdf5lib.callbacks.H5D_iterate_cb; import hdf.hdf5lib.callbacks.H5D_iterate_t; import hdf.hdf5lib.callbacks.H5E_walk_cb; import hdf.hdf5lib.callbacks.H5E_walk_t; -import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t; -import hdf.hdf5lib.callbacks.H5O_iterate_t; +import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t; +import hdf.hdf5lib.callbacks.H5O_iterate_t; import hdf.hdf5lib.callbacks.H5P_cls_close_func_cb; import hdf.hdf5lib.callbacks.H5P_cls_close_func_t; import hdf.hdf5lib.callbacks.H5P_cls_copy_func_cb; import hdf.hdf5lib.callbacks.H5P_cls_copy_func_t; import hdf.hdf5lib.callbacks.H5P_cls_create_func_cb; import hdf.hdf5lib.callbacks.H5P_cls_create_func_t; -import hdf.hdf5lib.callbacks.H5P_prp_set_func_cb; -import hdf.hdf5lib.callbacks.H5P_prp_get_func_cb; -import hdf.hdf5lib.callbacks.H5P_prp_delete_func_cb; -import hdf.hdf5lib.callbacks.H5P_prp_copy_func_cb; -import hdf.hdf5lib.callbacks.H5P_prp_compare_func_cb; -import hdf.hdf5lib.callbacks.H5P_prp_close_func_cb; -import hdf.hdf5lib.callbacks.H5P_prp_create_func_cb; import hdf.hdf5lib.callbacks.H5P_iterate_cb; import hdf.hdf5lib.callbacks.H5P_iterate_t; +import hdf.hdf5lib.callbacks.H5P_prp_close_func_cb; +import hdf.hdf5lib.callbacks.H5P_prp_compare_func_cb; +import hdf.hdf5lib.callbacks.H5P_prp_copy_func_cb; +import hdf.hdf5lib.callbacks.H5P_prp_create_func_cb; +import hdf.hdf5lib.callbacks.H5P_prp_delete_func_cb; +import hdf.hdf5lib.callbacks.H5P_prp_get_func_cb; +import hdf.hdf5lib.callbacks.H5P_prp_set_func_cb; import hdf.hdf5lib.exceptions.HDF5Exception; import hdf.hdf5lib.exceptions.HDF5JavaException; import hdf.hdf5lib.exceptions.HDF5LibraryException; import hdf.hdf5lib.structs.H5AC_cache_config_t; import hdf.hdf5lib.structs.H5A_info_t; import hdf.hdf5lib.structs.H5E_error2_t; -import hdf.hdf5lib.structs.H5F_info2_t; import hdf.hdf5lib.structs.H5FD_hdfs_fapl_t; import hdf.hdf5lib.structs.H5FD_ros3_fapl_t; +import hdf.hdf5lib.structs.H5F_info2_t; import hdf.hdf5lib.structs.H5G_info_t; import hdf.hdf5lib.structs.H5L_info_t; import hdf.hdf5lib.structs.H5O_info_t; @@ -61,8 +61,8 @@ import hdf.hdf5lib.structs.H5O_token_t; /** * This class is the Java interface for the HDF5 library. *

- * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps a single - * HDF5 entry point, generally with the arguments and return codes analogous to the C interface. + * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps + * a single HDF5 entry point, generally with the arguments and return codes analogous to the C interface. *

* For details of the HDF5 library, see the HDF5 Documentation at: * http://hdfgroup.org/HDF5/ @@ -71,8 +71,8 @@ import hdf.hdf5lib.structs.H5O_token_t; * Mapping of arguments for Java * *

- * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in the HDF - * Reference Manual. + * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in + * the HDF Reference Manual. * * * @@ -112,17 +112,19 @@ import hdf.hdf5lib.structs.H5O_token_t; *
HDF-5 C types to Java types
* General Rules for Passing Arguments and Results *

- * In general, arguments passed IN to Java are the analogous basic types, as above. The exception is for arrays, - * which are discussed below. + * In general, arguments passed IN to Java are the analogous basic types, as above. The exception is + * for arrays, which are discussed below. *

- * The return value of Java methods is also the analogous type, as above. A major exception to that rule is that - * all HDF functions that return SUCCEED/FAIL are declared boolean in the Java version, rather than int as - * in the C. Functions that return a value or else FAIL are declared the equivalent to the C function. However, in most - * cases the Java method will raise an exception instead of returning an error code. See Errors and - * Exceptions below. + * The return value of Java methods is also the analogous type, as above. A major exception to that + * rule is that all HDF functions that return SUCCEED/FAIL are declared boolean in the Java version, + * rather than int as in the C. Functions that return a value or else FAIL are declared the + * equivalent to the C function. + * However, in most cases the Java method will raise an exception instead of returning an error code. + * See Errors and Exceptions below. *

- * Java does not support pass by reference of arguments, so arguments that are returned through OUT parameters - * must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in arrays. + * Java does not support pass by reference of arguments, so arguments that are returned through OUT + * parameters must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in + * arrays. *

* For instance, a function that returns two integers is declared: * @@ -143,53 +145,57 @@ import hdf.hdf5lib.structs.H5O_token_t; * * *

- * All the routines where this convention is used will have specific documentation of the details, given below. + * All the routines where this convention is used will have specific documentation of the details, given + * below. *

* Arrays *

- * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API describes the - * layout of the source and destination, and the data for the array passed as a block of bytes, for instance, + * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API + * describes the layout of the source and destination, and the data for the array passed as a block of + * bytes, for instance, * * 

- *      herr_t H5Dread(long fid, long filetype, long memtype, long memspace,
- *      void * data);
+ *      herr_t H5Dread(long fid, long filetype, long memtype, long memspace, void * data);
  *
* *

- * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that is the - * data for a multi-dimensional array. The other parameters describe the dimensions, rank, and datatype of the array on - * disk (source) and in memory (destination). + * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that + * is the data for a multi-dimensional array. The other parameters describe the dimensions, rank, and datatype + * of the array ondisk (source) and in memory (destination). *

- * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore, multidimensional - * arrays are definitely not laid out contiguously in memory. It would be infeasible to declare a separate - * routine for every combination of number type and dimensionality. For that reason, the - * HDFArray class is used to discover the type, shape, and size of the - * data array at run time, and to convert to and from a contiguous array of bytes in synchronized static native C order. + * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore, + * multidimensional arrays are definitely not laid out contiguously in memory. It would be infeasible + * to declare a separate routine for every combination of number type and dimensionality. For that reason, the + * HDFArray class is used to discover the type, shape, and + * size of the data array at run time, and to convert to and from a contiguous array of bytes in synchronized + * static native C order. *

- * The upshot is that any Java array of numbers (either primitive or sub-classes of type Number) can be passed as - * an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes needed by the C - * library. So the function above would be declared: + * The upshot is that any Java array of numbers (either primitive or sub-classes of type Number) can be + * passed as an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes + * needed by the C library. So the function above would be declared: * * 

- * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace, Object data);
+ * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace,
+ * Object data);
  *
* OPEN_IDS.addElement(id); - * and the parameter data can be any multi-dimensional array of numbers, such as float[][], or int[][][], or - * Double[][]. + * and the parameter data can be any multi-dimensional array of numbers, such as float[][], or + * int[][][], or Double[][]. *

* HDF-5 Constants *

- * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java programs - * via the class HDF5Constants. For example, the parameters for - * the h5open() call include two numeric values, HDFConstants.H5F_ACC_RDWR and - * HDF5Constants.H5P_DEFAULT. As would be expected, these numbers correspond to the C constants + * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java + * programs via the class HDF5Constants. For example, + * the parameters for the h5open() call include two numeric values, HDFConstants.H5F_ACC_RDWR + * and HDF5Constants.H5P_DEFAULT. + * As would be expected, these numbers correspond to the C constants * H5F_ACC_RDWR and H5P_DEFAULT. *

- * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and "hsize_t". - * These values are determined at run time by the HDF-5 C library. To support these parameters, the Java class - * HDF5CDataTypes looks up the values when initiated. The values - * can be accessed as public variables of the Java class, such as: + * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and + * "hsize_t". These values are determined at run time by the HDF-5 C library. To support these parameters, + * the Java class HDF5CDataTypes looks up the values + * when initiated. The values can be accessed as public variables of the Java class, such as: * * 

  * long data_type = HDF5CDataTypes.JH5T_NATIVE_INT;
@@ -200,20 +206,22 @@ import hdf.hdf5lib.structs.H5O_token_t;
  * 

  * Error handling and Exceptions
  * 

- * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is omitted from the
- * JHI5. Errors are converted into Java exceptions. This is totally different from the C interface, but is very natural
- * for Java programming.
+ * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is omitted
+ * from the JHI5. Errors are converted into Java exceptions. This is totally different from the C interface,
+ * but is very natural for Java programming.
  * 

  * The exceptions of the JHI5 are organized as sub-classes of the class
- *  HDF5Exception. There are two subclasses of
- * HDF5Exception,  HDF5LibraryException
- * and  HDF5JavaException. The sub-classes of the
- * former represent errors from the HDF-5 C library, while sub-classes of the latter represent errors in the JHI5
- * wrapper and support code.
+ *  HDF5Exception. There are two subclasses
+ * of
+ * HDF5Exception, 
+ HDF5LibraryException
+ * and  HDF5JavaException. The
+ * sub-classes of the former represent errors from the HDF-5 C library, while sub-classes of the latter
+ * represent errors in the JHI5 wrapper and support code.
  * 

- * The super-class HDF5LibraryException implements the method 'printStackTrace()', which
- * prints out the HDF-5 error stack, as described in the HDF-5 C API H5Eprint(). This may be used by Java
- * exception handlers to print out the HDF-5 error stack.
+ * The super-class HDF5LibraryException implements the method 'printStackTrace()',
+ * which prints out the HDF-5 error stack, as described in the HDF-5 C API H5Eprint(). This may
+ * be used by Java exception handlers to print out the HDF-5 error stack.
  * 

  *
  * @version HDF5 1.13.2 

@@ -222,7 +230,8 @@ import hdf.hdf5lib.structs.H5O_token_t;
  *           hdf.hdf5lib.HDF5CDataTypes

  *           hdf.hdf5lib.HDF5Exception

  *           http://hdfgroup.org/HDF5"
- **/
+ *
+ */
 public class H5 implements java.io.Serializable {
     /**
      *
@@ -239,38 +248,36 @@ public class H5 implements java.io.Serializable {
      *
      * Make sure to update the versions number when a different library is used.
      */
-    public final static int LIB_VERSION[] = { 1, 13, 2 };
+    public final static int LIB_VERSION[] = {1, 13, 2};
 
     /**
-    *  add system property to load library by path
-    */
+     *  add system property to load library by path
+     */
     public final static String H5PATH_PROPERTY_KEY = "hdf.hdf5lib.H5.hdf5lib";
 
     /**
-    *  add system property to load library by name from library path, via System.loadLibrary()
-    */
+     *  add system property to load library by name from library path, via System.loadLibrary()
+     */
     public final static String H5_LIBRARY_NAME_PROPERTY_KEY = "hdf.hdf5lib.H5.loadLibraryName";
     private static String s_libraryName;
     private static boolean isLibraryLoaded = false;
 
-    private final static boolean IS_CRITICAL_PINNING = true;
-    // change from Vector to LinkedHashSet - jp 6-Oct-2014
+    private final static boolean IS_CRITICAL_PINNING  = true;
     private final static LinkedHashSet OPEN_IDS = new LinkedHashSet();
 
-    static {
-        loadH5Lib();
-    }
+    static { loadH5Lib(); }
 
     /**
-    *  load native library
-    */
-    public static void loadH5Lib() {
+     *  load native library
+     */
+    public static void loadH5Lib()
+    {
         // Make sure that the library is loaded only once
         if (isLibraryLoaded)
             return;
 
         // first try loading library by name from user supplied library path
-        s_libraryName = System.getProperty(H5_LIBRARY_NAME_PROPERTY_KEY, null);
+        s_libraryName     = System.getProperty(H5_LIBRARY_NAME_PROPERTY_KEY, null);
         String mappedName = null;
         if ((s_libraryName != null) && (s_libraryName.length() > 0)) {
             try {
@@ -311,7 +318,7 @@ public class H5 implements java.io.Serializable {
                 }
                 else {
                     isLibraryLoaded = false;
-                    throw (new UnsatisfiedLinkError("Invalid HDF5 library, " + filename));
+                    throw(new UnsatisfiedLinkError("Invalid HDF5 library, " + filename));
                 }
             }
         }
@@ -320,7 +327,7 @@ public class H5 implements java.io.Serializable {
         if (!isLibraryLoaded) {
             try {
                 s_libraryName = "hdf5_java";
-                mappedName = System.mapLibraryName(s_libraryName);
+                mappedName    = System.mapLibraryName(s_libraryName);
                 System.loadLibrary("hdf5_java");
                 isLibraryLoaded = true;
             }
@@ -369,18 +376,14 @@ public class H5 implements java.io.Serializable {
      *
      * @return Returns a count of open IDs
      */
-    public final static int getOpenIDCount() {
-        return OPEN_IDS.size();
-    }
+    public final static int getOpenIDCount() { return OPEN_IDS.size(); }
 
     /**
      * Get the open IDs
      *
      * @return Returns a collection of open IDs
      */
-    public final static Collection getOpenIDs() {
-        return OPEN_IDS;
-    }
+    public final static Collection getOpenIDs() { return OPEN_IDS; }
 
     /**
      * H5check_version verifies that the arguments match the version numbers compiled into the library.
@@ -391,20 +394,21 @@ public class H5 implements java.io.Serializable {
      *            The minor version of the library.
      * @param relnum
      *            The release number of the library.
-     * @return a non-negative value if successful. Upon failure (when the versions do not match), this function causes
-     *         the application to abort (i.e., crash)
+     * @return a non-negative value if successful. Upon failure (when the versions do not match), this
+     *            function causes the application to abort (i.e., crash)
      *
-     *         See C API function: herr_t H5check_version()
+     * See C API function: herr_t H5check_version()
      **/
     public synchronized static native int H5check_version(int majnum, int minnum, int relnum);
 
     /**
-     * H5close flushes all data to disk, closes all file identifiers, and cleans up all memory used by the library.
+     * H5close flushes all data to disk, closes all file identifiers, and cleans up all memory used by the
+     * library.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5close() throws HDF5LibraryException;
 
@@ -414,35 +418,35 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5open() throws HDF5LibraryException;
 
     /**
-     * H5dont_atexit indicates to the library that an atexit() cleanup routine should not be installed. In order to be
-     * effective, this routine must be called before any other HDF function calls, and must be called each time the
-     * library is loaded/linked into the application (the first time and after it's been unloaded).
-     * 

-     * This is called by the static initializer, so this should never need to be explicitly called by a Java program.
+     * H5dont_atexit indicates to the library that an atexit() cleanup routine should not be installed. In
+     * order to be effective, this routine must be called before any other HDF function calls, and must be
+     * called each time the library is loaded/linked into the application (the first time and after it's been
+     * unloaded). 
 This is called by the static initializer, so this should never need to be explicitly
+     * called by a Java program.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     private synchronized static native int H5dont_atexit() throws HDF5LibraryException;
 
     /**
-     * Turn off error handling. By default, the C library prints the error stack of the HDF-5 C library on stdout. This
-     * behavior may be disabled by calling H5error_off().
+     * Turn off error handling. By default, the C library prints the error stack of the HDF-5 C library on
+     * stdout. This behavior may be disabled by calling H5error_off().
      *
      * @return a non-negative value if successful
      */
     public synchronized static native int H5error_off();
 
     /**
-     * Turn on error handling. By default, the C library prints the error stack of the HDF-5 C library on stdout. This
-     * behavior may be re-enabled by calling H5error_on().
+     * Turn on error handling. By default, the C library prints the error stack of the HDF-5 C library on
+     * stdout. This behavior may be re-enabled by calling H5error_on().
      */
     public synchronized static native void H5error_on();
 
@@ -452,13 +456,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5garbage_collect() throws HDF5LibraryException;
 
     /**
-     * H5get_libversion retrieves the major, minor, and release numbers of the version of the HDF library which is
-     * linked to the application.
+     * H5get_libversion retrieves the major, minor, and release numbers of the version of the HDF library
+     * which is linked to the application.
      *
      * @param libversion
      *            The version information of the HDF library.
@@ -471,7 +475,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful, along with the version information.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5get_libversion(int[] libversion) throws HDF5LibraryException;
 
@@ -502,10 +506,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful, along with the version information.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
-    */
+     *            Error from the HDF-5 Library.
+     */
     public synchronized static native int H5set_free_list_limits(int reg_global_lim, int reg_list_lim,
-            int arr_global_lim, int arr_list_lim, int blk_global_lim, int blk_list_lim) throws HDF5LibraryException;
+                                                                 int arr_global_lim, int arr_list_lim,
+                                                                 int blk_global_lim, int blk_list_lim)
+        throws HDF5LibraryException;
 
     /**
      * H5export_dataset is a utility function to save data in a file.
@@ -523,10 +529,11 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5export_dataset(String file_export_name, long file_id,
-            String object_path, int binary_order) throws HDF5LibraryException;
+                                                            String object_path, int binary_order)
+        throws HDF5LibraryException;
 
     /**
      * H5export_attribute is a utility function to save data in a file.
@@ -544,10 +551,11 @@ public class H5 implements java.io.Serializable {
      *            3 - export data as binary Big Endian.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5export_attribute(String file_export_name, long dataset_id,
-            String attribute_name, int binary_order) throws HDF5LibraryException;
+                                                              String attribute_name, int binary_order)
+        throws HDF5LibraryException;
 
     /**
      * H5is_library_threadsafe Checks to see if the library was built with thread-safety enabled.
@@ -577,9 +585,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Aclose(long attr_id) throws HDF5LibraryException {
+    public static int H5Aclose(long attr_id) throws HDF5LibraryException
+    {
         if (attr_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -602,12 +611,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Acopy(long src_aid, long dst_aid) throws HDF5LibraryException;
 
     /**
-     * H5Acreate creates an attribute, attr_name, which is attached to the object specified by the identifier loc_id.
+     * H5Acreate creates an attribute, attr_name, which is attached to the object specified by the identifier
+     * loc_id.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -625,12 +635,13 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - Name is null.
+     *            Name is null.
      **/
-    public static long H5Acreate(long loc_id, String attr_name, long type_id, long space_id, long acpl_id, long aapl_id)
-            throws HDF5LibraryException, NullPointerException {
+    public static long H5Acreate(long loc_id, String attr_name, long type_id, long space_id, long acpl_id,
+                                 long aapl_id) throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Acreate2(loc_id, attr_name, type_id, space_id, acpl_id, aapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5A create add {}", id);
@@ -643,15 +654,16 @@ public class H5 implements java.io.Serializable {
     /**
      * H5Acreate2 an attribute, attr_name, which is attached to the object specified by the identifier loc_id.
      *
-     * @see public static long H5Acreate( long loc_id, String attr_name, long type_id, long space_id, long acpl_id, long
-     *      aapl_id )
+     * @see public static long H5Acreate( long loc_id, String attr_name, long type_id, long space_id, long
+     *                                    acpl_id, long aapl_id )
      **/
-    private synchronized static native long _H5Acreate2(long loc_id, String attr_name, long type_id, long space_id,
-            long acpl_id, long aapl_id) throws HDF5LibraryException, NullPointerException;
+    private synchronized static native long _H5Acreate2(long loc_id, String attr_name, long type_id,
+                                                        long space_id, long acpl_id, long aapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Acreate_by_name creates an attribute, attr_name, which is attached to the object specified by loc_id and
-     * obj_name.
+     * H5Acreate_by_name creates an attribute, attr_name, which is attached to the object specified by loc_id
+     * and obj_name.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -673,13 +685,16 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Acreate_by_name(long loc_id, String obj_name, String attr_name, long type_id, long space_id,
-            long acpl_id, long aapl_id, long lapl_id) throws HDF5LibraryException, NullPointerException {
-        long id = _H5Acreate_by_name(loc_id, obj_name, attr_name, type_id, space_id, acpl_id, aapl_id, lapl_id);
+    public static long H5Acreate_by_name(long loc_id, String obj_name, String attr_name, long type_id,
+                                         long space_id, long acpl_id, long aapl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        long id =
+            _H5Acreate_by_name(loc_id, obj_name, attr_name, type_id, space_id, acpl_id, aapl_id, lapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Acreate_by_name add {}", id);
             OPEN_IDS.add(id);
@@ -689,8 +704,9 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Acreate_by_name(long loc_id, String obj_name, String attr_name,
-            long type_id, long space_id, long acpl_id, long aapl_id, long lapl_id) throws HDF5LibraryException,
-            NullPointerException;
+                                                               long type_id, long space_id, long acpl_id,
+                                                               long aapl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Adelete removes the attribute specified by its name, name, from a dataset, group, or named datatype.
@@ -703,12 +719,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Adelete(long loc_id, String name) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native int H5Adelete(long loc_id, String name)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Adelete_by_idx removes an attribute, specified by its location in an index, from an object.
@@ -727,16 +743,17 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - obj_name is null.
+     *            obj_name is null.
      **/
-    public synchronized static native void H5Adelete_by_idx(long loc_id, String obj_name, int idx_type, int order,
-            long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Adelete_by_idx(long loc_id, String obj_name, int idx_type,
+                                                            int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Adelete_by_name removes the attribute attr_name from an object specified by location and name, loc_id and
-     * obj_name, respectively.
+     * H5Adelete_by_name removes the attribute attr_name from an object specified by location and name, loc_id
+     * and obj_name, respectively.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -750,12 +767,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Adelete_by_name(long loc_id, String obj_name, String attr_name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Adelete_by_name(long loc_id, String obj_name, String attr_name,
+                                                            long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aexists determines whether the attribute attr_name exists on the object specified by obj_id.
@@ -768,16 +786,16 @@ public class H5 implements java.io.Serializable {
      * @return boolean true if an attribute with a given name exists.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - attr_name is null.
+     *            attr_name is null.
      **/
-    public synchronized static native boolean H5Aexists(long obj_id, String attr_name) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native boolean H5Aexists(long obj_id, String attr_name)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Aexists_by_name determines whether the attribute attr_name exists on an object. That object is specified by its
-     * location and name, loc_id and obj_name, respectively.
+     * H5Aexists_by_name determines whether the attribute attr_name exists on an object. That object is
+     * specified by its location and name, loc_id and obj_name, respectively.
      *
      * @param loc_id
      *            IN: Location of object to which attribute is attached .
@@ -791,12 +809,13 @@ public class H5 implements java.io.Serializable {
      * @return boolean true if an attribute with a given name exists, otherwise returns false.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native boolean H5Aexists_by_name(long loc_id, String obj_name, String attr_name,
-            long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native boolean H5Aexists_by_name(long loc_id, String obj_name,
+                                                                String attr_name, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aget_info retrieves attribute information, by attribute identifier.
@@ -807,7 +826,7 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native H5A_info_t H5Aget_info(long attr_id) throws HDF5LibraryException;
 
@@ -830,12 +849,14 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - obj_name is null.
+     *            obj_name is null.
      **/
-    public synchronized static native H5A_info_t H5Aget_info_by_idx(long loc_id, String obj_name, int idx_type,
-            int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5A_info_t H5Aget_info_by_idx(long loc_id, String obj_name,
+                                                                    int idx_type, int order, long n,
+                                                                    long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aget_info_by_name Retrieves attribute information, by attribute name.
@@ -852,12 +873,13 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5A_info_t) for Attribute information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - obj_name is null.
+     *            obj_name is null.
      **/
-    public synchronized static native H5A_info_t H5Aget_info_by_name(long loc_id, String obj_name, String attr_name,
-            long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5A_info_t H5Aget_info_by_name(long loc_id, String obj_name,
+                                                                     String attr_name, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aget_name retrieves the name of an attribute specified by the identifier, attr_id.
@@ -868,14 +890,13 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native String H5Aget_name(long attr_id)
-            throws HDF5LibraryException;
+    public synchronized static native String H5Aget_name(long attr_id) throws HDF5LibraryException;
 
     /**
-     * H5Aget_name_by_idx retrieves the name of an attribute that is attached to an object, which is specified by its
-     * location and name, loc_id and obj_name, respectively.
+     * H5Aget_name_by_idx retrieves the name of an attribute that is attached to an object, which is specified
+     * by its location and name, loc_id and obj_name, respectively.
      *
      * @param attr_id
      *            IN: Attribute identifier
@@ -893,12 +914,13 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF5 Library.
+     *            Error from the HDF5 Library.
      * @exception NullPointerException
-     *                - obj_name is null.
+     *            obj_name is null.
      **/
-    public synchronized static native String H5Aget_name_by_idx(long attr_id, String obj_name, int idx_type, int order,
-            long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native String H5Aget_name_by_idx(long attr_id, String obj_name, int idx_type,
+                                                                int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aget_space retrieves a copy of the dataspace for an attribute.
@@ -909,7 +931,7 @@ public class H5 implements java.io.Serializable {
      * @return attribute dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public static long H5Aget_space(long attr_id) throws HDF5LibraryException
     {
@@ -925,7 +947,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_space(long attr_id) throws HDF5LibraryException;
 
     /**
-     * H5Aget_storage_size returns the amount of storage that is required for the specified attribute, attr_id.
+     * H5Aget_storage_size returns the amount of storage that is required for the specified attribute,
+     * attr_id.
      *
      * @param attr_id
      *            IN: Identifier of the attribute to query.
@@ -933,7 +956,7 @@ public class H5 implements java.io.Serializable {
      * @return the amount of storage size allocated for the attribute; otherwise returns 0 (zero)
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Aget_storage_size(long attr_id) throws HDF5LibraryException;
 
@@ -946,7 +969,7 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public static long H5Aget_type(long attr_id) throws HDF5LibraryException
     {
@@ -962,8 +985,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Aget_type(long attr_id) throws HDF5LibraryException;
 
     /**
-     * H5Aopen opens an existing attribute, attr_name, that is attached to an object specified an object identifier,
-     * object_id.
+     * H5Aopen opens an existing attribute, attr_name, that is attached to an object specified an object
+     * identifier, object_id.
      *
      * @param obj_id
      *            IN: Identifier for object to which attribute is attached
@@ -975,12 +998,12 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - Name is null.
+     *            Name is null.
      **/
     public static long H5Aopen(long obj_id, String attr_name, long aapl_id)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         long id = _H5Aopen(obj_id, attr_name, aapl_id);
         if (id > 0) {
@@ -992,11 +1015,11 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Aopen(long obj_id, String attr_name, long aapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Aopen_by_idx opens an existing attribute that is attached to an object specified by location and name, loc_id
-     * and obj_name, respectively
+     * H5Aopen_by_idx opens an existing attribute that is attached to an object specified by location and
+     * name, loc_id and obj_name, respectively
      *
      * @param loc_id
      *            IN: Location of object to which attribute is attached
@@ -1016,12 +1039,13 @@ public class H5 implements java.io.Serializable {
      * @return An attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - Name is null.
+     *            Name is null.
      **/
-    public static long H5Aopen_by_idx(long loc_id, String obj_name, int idx_type, int order, long n, long aapl_id,
-            long lapl_id) throws HDF5LibraryException, NullPointerException
+    public static long H5Aopen_by_idx(long loc_id, String obj_name, int idx_type, int order, long n,
+                                      long aapl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
     {
         long id = _H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n, aapl_id, lapl_id);
         if (id > 0) {
@@ -1032,8 +1056,9 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Aopen_by_idx(long loc_id, String obj_name, int idx_type, int order,
-            long n, long aapl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    private synchronized static native long _H5Aopen_by_idx(long loc_id, String obj_name, int idx_type,
+                                                            int order, long n, long aapl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aopen_by_name Opens an attribute for an object by object name and attribute name
@@ -1052,12 +1077,12 @@ public class H5 implements java.io.Serializable {
      * @return Returns an attribute identifier if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - obj_name is null.
+     *            obj_name is null.
      **/
-    public static long H5Aopen_by_name(long loc_id, String obj_name, String attr_name, long aapl_id, long lapl_id)
-            throws HDF5LibraryException, NullPointerException
+    public static long H5Aopen_by_name(long loc_id, String obj_name, String attr_name, long aapl_id,
+                                       long lapl_id) throws HDF5LibraryException, NullPointerException
     {
         long id = _H5Aopen_by_name(loc_id, obj_name, attr_name, aapl_id, lapl_id);
         if (id > 0) {
@@ -1069,7 +1094,8 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Aopen_by_name(long loc_id, String obj_name, String attr_name,
-            long aapl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+                                                             long aapl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1087,12 +1113,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Aread(long attr_id, long mem_type_id, byte[] obj, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aread(long attr_id, long mem_type_id, byte[] obj,
+                                                  boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1108,11 +1135,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static int H5Aread(long attr_id, long mem_type_id, byte[] buf) throws HDF5LibraryException, NullPointerException
+    public synchronized static int H5Aread(long attr_id, long mem_type_id, byte[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Aread(attr_id, mem_type_id, buf, true);
     }
@@ -1131,11 +1159,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException
+    public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
         return H5Aread(attr_id, mem_type_id, obj, true);
     }
@@ -1156,66 +1185,67 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Failure in the data conversion.
+     *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null. See public synchronized static native int H5Aread( )
+     *            data buffer is null. See public synchronized static native int H5Aread( )
      **/
-    public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj, boolean isCriticalPinning)
-            throws HDF5Exception, HDF5LibraryException, NullPointerException
+    public synchronized static int H5Aread(long attr_id, long mem_type_id, Object obj,
+                                           boolean isCriticalPinning)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
-        int status = -1;
+        int status   = -1;
         boolean is1D = false;
 
         Class dataClass = obj.getClass();
         if (!dataClass.isArray()) {
-            throw (new HDF5JavaException("H5Aread: data is not an array"));
+            throw(new HDF5JavaException("H5Aread: data is not an array"));
         }
 
         String cname = dataClass.getName();
-        is1D = (cname.lastIndexOf('[') == cname.indexOf('['));
-        char dname = cname.charAt(cname.lastIndexOf("[") + 1);
+        is1D         = (cname.lastIndexOf('[') == cname.indexOf('['));
+        char dname   = cname.charAt(cname.lastIndexOf("[") + 1);
         log.trace("H5Aread: cname={} is1D={} dname={}", cname, is1D, dname);
 
         if (is1D && (dname == 'B')) {
             log.trace("H5Aread_dname_B");
-            status = H5Aread(attr_id, mem_type_id, (byte[]) obj, isCriticalPinning);
+            status = H5Aread(attr_id, mem_type_id, (byte[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'S')) {
             log.trace("H5Aread_dname_S");
-            status = H5Aread_short(attr_id, mem_type_id, (short[]) obj, isCriticalPinning);
+            status = H5Aread_short(attr_id, mem_type_id, (short[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'I')) {
             log.trace("H5Aread_dname_I");
-            status = H5Aread_int(attr_id, mem_type_id, (int[]) obj, isCriticalPinning);
+            status = H5Aread_int(attr_id, mem_type_id, (int[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'J')) {
             log.trace("H5Aread_dname_J");
-            status = H5Aread_long(attr_id, mem_type_id, (long[]) obj, isCriticalPinning);
+            status = H5Aread_long(attr_id, mem_type_id, (long[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'F')) {
             log.trace("H5Aread_dname_F");
-            status = H5Aread_float(attr_id, mem_type_id, (float[]) obj, isCriticalPinning);
+            status = H5Aread_float(attr_id, mem_type_id, (float[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'D')) {
             log.trace("H5Aread_dname_D");
-            status = H5Aread_double(attr_id, mem_type_id, (double[]) obj, isCriticalPinning);
+            status = H5Aread_double(attr_id, mem_type_id, (double[])obj, isCriticalPinning);
         }
         else if ((H5.H5Tdetect_class(mem_type_id, HDF5Constants.H5T_REFERENCE) &&
-                (is1D && (dataClass.getComponentType() == String.class))) ||
-                H5.H5Tequal(mem_type_id, HDF5Constants.H5T_STD_REF_DSETREG)) {
+                  (is1D && (dataClass.getComponentType() == String.class))) ||
+                 H5.H5Tequal(mem_type_id, HDF5Constants.H5T_STD_REF_DSETREG)) {
             log.trace("H5Aread_reg_ref");
-            status = H5Aread_reg_ref(attr_id, mem_type_id, (String[]) obj);
+            status = H5Aread_reg_ref(attr_id, mem_type_id, (String[])obj);
         }
         else if (is1D && (dataClass.getComponentType() == String.class)) {
             log.trace("H5Aread_string type");
-            status = H5Aread_string(attr_id, mem_type_id, (String[]) obj);
+            status = H5Aread_string(attr_id, mem_type_id, (String[])obj);
         }
         else {
             // Create a data buffer to hold the data into a Java Array
             HDFArray theArray = new HDFArray(obj);
-            byte[] buf = theArray.emptyBytes();
+            byte[] buf        = theArray.emptyBytes();
             log.trace("H5Aread_else");
 
             // This will raise an exception if there is an error
@@ -1227,7 +1257,7 @@ public class H5 implements java.io.Serializable {
             }
 
             // clean up these: assign 'null' as hint to gc()
-            buf = null;
+            buf      = null;
             theArray = null;
         }
 
@@ -1250,12 +1280,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Aread_double(long attr_id, long mem_type_id, double[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aread_double(long attr_id, long mem_type_id, double[] buf,
+                                                         boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1271,12 +1302,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Aread_double(long attr_id, long mem_type_id, double[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Aread_double(attr_id, mem_type_id, buf, true);
     }
@@ -1297,12 +1328,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Aread_float(long attr_id, long mem_type_id, float[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aread_float(long attr_id, long mem_type_id, float[] buf,
+                                                        boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1318,12 +1350,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Aread_float(long attr_id, long mem_type_id, float[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Aread_float(attr_id, mem_type_id, buf, true);
     }
@@ -1344,12 +1376,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Aread_int(long attr_id, long mem_type_id, int[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aread_int(long attr_id, long mem_type_id, int[] buf,
+                                                      boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1365,12 +1398,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Aread_int(long attr_id, long mem_type_id, int[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Aread_int(attr_id, mem_type_id, buf, true);
     }
@@ -1391,12 +1424,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Aread_long(long attr_id, long mem_type_id, long[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aread_long(long attr_id, long mem_type_id, long[] buf,
+                                                       boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1412,12 +1446,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Aread_long(long attr_id, long mem_type_id, long[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Aread_long(attr_id, mem_type_id, buf, true);
     }
@@ -1436,12 +1470,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Aread_reg_ref(long attr_id, long mem_type_id, String[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1459,12 +1493,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Aread_short(long attr_id, long mem_type_id, short[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aread_short(long attr_id, long mem_type_id, short[] buf,
+                                                        boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1480,12 +1515,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Aread_short(long attr_id, long mem_type_id, short[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Aread_short(attr_id, mem_type_id, buf, true);
     }
@@ -1504,12 +1539,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5AreadVL(long attr_id, long mem_type_id, Object[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1525,12 +1560,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Aread_string(long attr_id, long mem_type_id, String[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1546,12 +1581,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *             data buffer is null.
      **/
     public synchronized static native int H5Aread_VLStrings(long attr_id, long mem_type_id, Object[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aread reads an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1567,16 +1602,16 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5AreadComplex(long attr_id, long mem_type_id, String[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Arename changes the name of attribute that is attached to the object specified by loc_id. The attribute named
-     * old_attr_name is renamed new_attr_name.
+     * H5Arename changes the name of attribute that is attached to the object specified by loc_id. The
+     *attribute named old_attr_name is renamed new_attr_name.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -1588,16 +1623,16 @@ public class H5 implements java.io.Serializable {
      * @return A non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - Name is null.
+     *            Name is null.
      **/
     public synchronized static native int H5Arename(long loc_id, String old_attr_name, String new_attr_name)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Arename_by_name changes the name of attribute that is attached to the object specified by loc_id and obj_name.
-     * The attribute named old_attr_name is renamed new_attr_name.
+     * H5Arename_by_name changes the name of attribute that is attached to the object specified by loc_id and
+     * obj_name. The attribute named old_attr_name is renamed new_attr_name.
      *
      * @param loc_id
      *            IN: Location or object identifier; may be dataset or group
@@ -1613,12 +1648,13 @@ public class H5 implements java.io.Serializable {
      * @return A non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - Name is null.
+     *            Name is null.
      **/
-    public synchronized static native int H5Arename_by_name(long loc_id, String obj_name, String old_attr_name,
-            String new_attr_name, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int
+    H5Arename_by_name(long loc_id, String obj_name, String old_attr_name, String new_attr_name, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1636,12 +1672,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
-    public synchronized static native int H5Awrite(long attr_id, long mem_type_id, byte[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Awrite(long attr_id, long mem_type_id, byte[] buf,
+                                                   boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1657,12 +1694,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite(long attr_id, long mem_type_id, byte[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Awrite(attr_id, mem_type_id, buf, true);
     }
@@ -1681,12 +1718,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite(long attr_id, long mem_type_id, Object obj)
-            throws HDF5Exception, HDF5LibraryException, NullPointerException
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
         return H5Awrite(attr_id, mem_type_id, obj, true);
     }
@@ -1707,55 +1744,56 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Failure in the data conversion.
+     *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data object is null
+     *            data object is null
      **/
-    public synchronized static int H5Awrite(long attr_id, long mem_type_id, Object obj, boolean isCriticalPinning)
-            throws HDF5Exception, HDF5LibraryException, NullPointerException
+    public synchronized static int H5Awrite(long attr_id, long mem_type_id, Object obj,
+                                            boolean isCriticalPinning)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
-        int status = -1;
+        int status   = -1;
         boolean is1D = false;
 
         Class dataClass = obj.getClass();
         if (!dataClass.isArray()) {
-            throw (new HDF5JavaException("H5Dwrite: data is not an array"));
+            throw(new HDF5JavaException("H5Dwrite: data is not an array"));
         }
 
         String cname = dataClass.getName();
-        is1D = (cname.lastIndexOf('[') == cname.indexOf('['));
-        char dname = cname.charAt(cname.lastIndexOf("[") + 1);
+        is1D         = (cname.lastIndexOf('[') == cname.indexOf('['));
+        char dname   = cname.charAt(cname.lastIndexOf("[") + 1);
 
         if (is1D && (dname == 'B')) {
-            status = H5Awrite(attr_id, mem_type_id, (byte[]) obj, isCriticalPinning);
+            status = H5Awrite(attr_id, mem_type_id, (byte[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'S')) {
-            status = H5Awrite_short(attr_id, mem_type_id, (short[]) obj, isCriticalPinning);
+            status = H5Awrite_short(attr_id, mem_type_id, (short[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'I')) {
-            status = H5Awrite_int(attr_id, mem_type_id, (int[]) obj, isCriticalPinning);
+            status = H5Awrite_int(attr_id, mem_type_id, (int[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'J')) {
-            status = H5Awrite_long(attr_id, mem_type_id, (long[]) obj, isCriticalPinning);
+            status = H5Awrite_long(attr_id, mem_type_id, (long[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'F')) {
-            status = H5Awrite_float(attr_id, mem_type_id, (float[]) obj, isCriticalPinning);
+            status = H5Awrite_float(attr_id, mem_type_id, (float[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'D')) {
-            status = H5Awrite_double(attr_id, mem_type_id, (double[]) obj, isCriticalPinning);
+            status = H5Awrite_double(attr_id, mem_type_id, (double[])obj, isCriticalPinning);
         }
         else if (is1D && (dataClass.getComponentType() == String.class)) {
             log.trace("H5Dwrite_string type");
-            status = H5Awrite_string(attr_id, mem_type_id, (String[]) obj);
+            status = H5Awrite_string(attr_id, mem_type_id, (String[])obj);
         }
         else {
             HDFArray theArray = new HDFArray(obj);
-            byte[] buf = theArray.byteify();
+            byte[] buf        = theArray.byteify();
 
-            status = H5Awrite(attr_id, mem_type_id, buf);
-            buf = null;
+            status   = H5Awrite(attr_id, mem_type_id, buf);
+            buf      = null;
             theArray = null;
         }
 
@@ -1778,12 +1816,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *             Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
-    public synchronized static native int H5Awrite_double(long attr_id, long mem_type_id, double[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Awrite_double(long attr_id, long mem_type_id, double[] buf,
+                                                          boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1799,12 +1838,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite_double(long attr_id, long mem_type_id, double[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Awrite_double(attr_id, mem_type_id, buf, true);
     }
@@ -1825,12 +1864,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
-    public synchronized static native int H5Awrite_float(long attr_id, long mem_type_id, float[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Awrite_float(long attr_id, long mem_type_id, float[] buf,
+                                                         boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1846,12 +1886,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite_float(long attr_id, long mem_type_id, float[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Awrite_float(attr_id, mem_type_id, buf, true);
     }
@@ -1872,12 +1912,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
-    public synchronized static native int H5Awrite_int(long attr_id, long mem_type_id, int[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Awrite_int(long attr_id, long mem_type_id, int[] buf,
+                                                       boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1893,12 +1934,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite_int(long attr_id, long mem_type_id, int[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Awrite_int(attr_id, mem_type_id, buf, true);
     }
@@ -1919,12 +1960,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
-    public synchronized static native int H5Awrite_long(long attr_id, long mem_type_id, long[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Awrite_long(long attr_id, long mem_type_id, long[] buf,
+                                                        boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1940,12 +1982,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite_long(long attr_id, long mem_type_id, long[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Awrite_long(attr_id, mem_type_id, buf, true);
     }
@@ -1966,12 +2008,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
-    public synchronized static native int H5Awrite_short(long attr_id, long mem_type_id, short[] buf, boolean isCriticalPinning)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Awrite_short(long attr_id, long mem_type_id, short[] buf,
+                                                         boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -1987,12 +2030,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static int H5Awrite_short(long attr_id, long mem_type_id, short[] buf)
-            throws HDF5LibraryException, NullPointerException
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Awrite_short(attr_id, mem_type_id, buf, true);
     }
@@ -2011,12 +2054,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static native int H5Awrite_string(long attr_id, long mem_type_id, String[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite writes an attribute, specified with attr_id. The attribute's memory datatype is specified with
@@ -2032,12 +2075,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data is null.
+     *            data is null.
      **/
     public synchronized static native int H5AwriteVL(long attr_id, long mem_type_id, Object[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Awrite_VLStrings writes a variable length String dataset, specified by its identifier attr_id, from
@@ -2055,13 +2098,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
 
     public synchronized static native int H5Awrite_VLStrings(long attr_id, long mem_type_id, Object[] buf)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aget_create_plist retrieves a copy of the attribute creation property list identifier.
@@ -2072,10 +2115,9 @@ public class H5 implements java.io.Serializable {
      * @return identifier for the attribute's creation property list if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Aget_create_plist(long attr_id)
-            throws HDF5LibraryException
+    public static long H5Aget_create_plist(long attr_id) throws HDF5LibraryException
     {
         long id = _H5Aget_create_plist(attr_id);
         if (id > 0) {
@@ -2094,20 +2136,22 @@ public class H5 implements java.io.Serializable {
      * as defined below, is passed to a user-defined function, op, which operates on that attribute.
      *
      * @param loc_id
-     *            IN: Identifier for object to which attributes are attached; may be group, dataset, or named datatype.
+     *            IN: Identifier for object to which attributes are attached; may be group, dataset, or named
+     *                datatype.
      * @param idx_type
      *            IN: The type of index specified by idx_type can be one of the following:
      *                      H5_INDEX_NAME             An alphanumeric index by attribute name.
      *                      H5_INDEX_CRT_ORDER        An index by creation order.
      * @param order
-     *            IN: The order in which the index is to be traversed, as specified by order, can be one of the following:
+     *            IN: The order in which the index is to be traversed, as specified by order, can be one of
+     *                the following:
      *                      H5_ITER_INC     Iteration is from beginning to end, i.e., a top-down iteration
      *                                      incrementing the index position at each step.
-     *                      H5_ITER_DEC     Iteration starts at the end of the index, i.e., a bottom-up iteration
-     *                                      decrementing the index position at each step.
-     *                      H5_ITER_NATIVE  HDF5 iterates in the fastest-available order. No information is provided
-     *                                      as to the order, but HDF5 ensures that each element in the index will be
-     *                                      visited if the iteration completes successfully.
+     *                      H5_ITER_DEC     Iteration starts at the end of the index, i.e., a bottom-up
+     *                                      iteration decrementing the index position at each step.
+     *                      H5_ITER_NATIVE  HDF5 iterates in the fastest-available order. No information is
+     *                                      provided as to the order, but HDF5 ensures that each element in
+     *                                      the index will be visited if the iteration completes successfully.
      * @param idx
      *            IN/OUT: Initial and returned offset within index.
      * @param op
@@ -2115,16 +2159,17 @@ public class H5 implements java.io.Serializable {
      * @param op_data
      *            IN/OUT: Pointer to any user-efined data for use by operator function.
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-     public synchronized static native int H5Aiterate(long loc_id, int idx_type, int order, long idx,
-                 H5A_iterate_cb op, H5A_iterate_t op_data) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aiterate(long loc_id, int idx_type, int order, long idx,
+                                                     H5A_iterate_cb op, H5A_iterate_t op_data)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Aiterate_by_name iterates over the attributes attached to the dataset or group specified with loc_id
@@ -2132,7 +2177,8 @@ public class H5 implements java.io.Serializable {
      * below, is passed to a user-defined function, op, which operates on that attribute.
      *
      * @param loc_id
-     *            IN: Identifier for object to which attributes are attached; may be group, dataset, or named datatype.
+     *            IN: Identifier for object to which attributes are attached; may be group, dataset, or named
+     *                datatype.
      * @param obj_name
      *            IN: Name of object, relative to location.
      * @param idx_type
@@ -2140,14 +2186,15 @@ public class H5 implements java.io.Serializable {
      *                      H5_INDEX_NAME             An alphanumeric index by attribute name.
      *                      H5_INDEX_CRT_ORDER        An index by creation order.
      * @param order
-     *            IN: The order in which the index is to be traversed, as specified by order, can be one of the following:
-     *                      H5_ITER_INC     Iteration is from beginning to end, i.e., a top-down iteration
-     *                                      incrementing the index position at each step.
-     *                      H5_ITER_DEC     Iteration starts at the end of the index, i.e., a bottom-up iteration
-     *                                      decrementing the index position at each step.
-     *                      H5_ITER_NATIVE  HDF5 iterates in the fastest-available order. No information is provided
-     *                                      as to the order, but HDF5 ensures that each element in the index will be
-     *                                      visited if the iteration completes successfully.
+     *            IN: The order in which the index is to be traversed, as specified by order, can be one of
+     *                the following:
+     *                H5_ITER_INC     Iteration is from beginning to end, i.e., a top-down
+     *                iteration incrementing the index position at each step.
+     *                H5_ITER_DEC     Iteration starts at the end of the index, i.e., a bottom-up iteration
+     *                                decrementing the index position at each step.
+     *                H5_ITER_NATIVE  HDF5 iterates in the fastest-available order. No information is provided
+     *                                as to the order, but HDF5 ensures that each element in the index will be
+     *                                visited if the iteration completes successfully.
      * @param idx
      *            IN/OUT: Initial and returned offset within index.
      * @param op
@@ -2157,16 +2204,18 @@ public class H5 implements java.io.Serializable {
      * @param lapl_id
      *            IN: Link access property list
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-     public synchronized static native int H5Aiterate_by_name(long loc_id, String obj_name, int idx_type,
-                        int order, long idx, H5A_iterate_cb op, H5A_iterate_t op_data, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Aiterate_by_name(long loc_id, String obj_name, int idx_type,
+                                                             int order, long idx, H5A_iterate_cb op,
+                                                             H5A_iterate_t op_data, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     // ////////////////////////////////////////////////////////////
     // //
@@ -2217,7 +2266,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Dcopy(long src_did, long dst_did) throws HDF5LibraryException;
 
@@ -2230,9 +2279,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Dclose(long dataset_id) throws HDF5LibraryException {
+    public static int H5Dclose(long dataset_id) throws HDF5LibraryException
+    {
         if (dataset_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");
 
@@ -2265,12 +2315,13 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Dcreate(long loc_id, String name, long type_id, long space_id, long lcpl_id, long dcpl_id,
-            long dapl_id) throws HDF5LibraryException, NullPointerException {
+    public static long H5Dcreate(long loc_id, String name, long type_id, long space_id, long lcpl_id,
+                                 long dcpl_id, long dapl_id) throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Dcreate2(loc_id, name, type_id, space_id, lcpl_id, dcpl_id, dapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Dcreate add {}", id);
@@ -2283,11 +2334,12 @@ public class H5 implements java.io.Serializable {
     /**
      * H5Dcreate2 creates a new dataset named name at the location specified by loc_id.
      *
-     * @see public static int H5Dcreate(int loc_id, String name, int type_id, int space_id, int lcpl_id, int dcpl_id,
-     *      int dapl_id)
+     * @see public static int H5Dcreate(int loc_id, String name, int type_id, int space_id, int lcpl_id, int
+     *                                  dcpl_id, int dapl_id)
      **/
     private synchronized static native long _H5Dcreate2(long loc_id, String name, long type_id, long space_id,
-            long lcpl_id, long dcpl_id, long dapl_id) throws HDF5LibraryException, NullPointerException;
+                                                        long lcpl_id, long dcpl_id, long dapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Dcreate_anon creates a dataset in the file specified by loc_id.
@@ -2306,10 +2358,11 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public static long H5Dcreate_anon(long loc_id, long type_id, long space_id, long dcpl_id, long dapl_id)
-            throws HDF5LibraryException {
+        throws HDF5LibraryException
+    {
         long id = _H5Dcreate_anon(loc_id, type_id, space_id, dcpl_id, dapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Dcreate_anon add {}", id);
@@ -2319,11 +2372,13 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Dcreate_anon(long loc_id, long type_id, long space_id, long dcpl_id,
-            long dapl_id) throws HDF5LibraryException;
+    private synchronized static native long _H5Dcreate_anon(long loc_id, long type_id, long space_id,
+                                                            long dcpl_id, long dapl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Dfill explicitly fills the dataspace selection in memory, space_id, with the fill value specified in fill.
+     * H5Dfill explicitly fills the dataspace selection in memory, space_id, with the fill value specified in
+     * fill.
      *
      * @param fill
      *            IN: Pointer to the fill value to be used.
@@ -2337,12 +2392,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Dataspace describing memory buffer and containing the selection to be filled.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native void H5Dfill(byte[] fill, long fill_type, byte[] buf, long buf_type, long space_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Dfill(byte[] fill, long fill_type, byte[] buf, long buf_type,
+                                                   long space_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Dget_access_plist returns an identifier for a copy of the dataset access property list for a dataset.
@@ -2353,21 +2409,23 @@ public class H5 implements java.io.Serializable {
      * @return a dataset access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Dget_access_plist(long dset_id) throws HDF5LibraryException;
 
     /**
-     * H5Dget_create_plist returns an identifier for a copy of the dataset creation property list for a dataset.
+     * H5Dget_create_plist returns an identifier for a copy of the dataset creation property list for a
+     * dataset.
      *
      * @param dataset_id
      *            Identifier of the dataset to query.
      * @return a dataset creation property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Dget_create_plist(long dataset_id) throws HDF5LibraryException {
+    public static long H5Dget_create_plist(long dataset_id) throws HDF5LibraryException
+    {
         long id = _H5Dget_create_plist(dataset_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Dget_create_plist add {}", id);
@@ -2388,7 +2446,7 @@ public class H5 implements java.io.Serializable {
      * @return the offset in bytes.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Dget_offset(long dset_id) throws HDF5LibraryException;
 
@@ -2401,9 +2459,10 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Dget_space(long dataset_id) throws HDF5LibraryException {
+    public static long H5Dget_space(long dataset_id) throws HDF5LibraryException
+    {
         long id = _H5Dget_space(dataset_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Dget_space add {}", id);
@@ -2424,7 +2483,7 @@ public class H5 implements java.io.Serializable {
      * @return the space allocation status
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Dget_space_status(long dset_id) throws HDF5LibraryException;
 
@@ -2437,10 +2496,10 @@ public class H5 implements java.io.Serializable {
      * @return he amount of storage space allocated for the dataset.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Dget_storage_size(long dataset_id) throws HDF5LibraryException,
-            IllegalArgumentException;
+    public synchronized static native long H5Dget_storage_size(long dataset_id)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Dget_type returns an identifier for a copy of the datatype for a dataset.
@@ -2451,9 +2510,10 @@ public class H5 implements java.io.Serializable {
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Dget_type(long dataset_id) throws HDF5LibraryException {
+    public static long H5Dget_type(long dataset_id) throws HDF5LibraryException
+    {
         long id = _H5Dget_type(dataset_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Dget_type add {}", id);
@@ -2466,8 +2526,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Dget_type(long dataset_id) throws HDF5LibraryException;
 
     /**
-     * H5Diterate iterates over all the data elements in the memory buffer buf, executing the callback function operator
-     * once for each such data element.
+     * H5Diterate iterates over all the data elements in the memory buffer buf, executing the callback
+     * function operator once for each such data element.
      *
      * @param buf
      *            IN/OUT: Pointer to the memory containing the elements to iterate over.
@@ -2480,19 +2540,21 @@ public class H5 implements java.io.Serializable {
      * @param op_data
      *            IN/OUT: Pointer to any user-efined data for use by operator function.
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native int H5Diterate(byte[] buf, long buf_type, long space_id, H5D_iterate_cb op,
-            H5D_iterate_t op_data) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Diterate(byte[] buf, long buf_type, long space_id,
+                                                     H5D_iterate_cb op, H5D_iterate_t op_data)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dopen opens the existing dataset specified by a location identifier and name, loc_id and name, respectively.
+     * H5Dopen opens the existing dataset specified by a location identifier and name, loc_id and name,
+     * respectively.
      *
      * @param loc_id
      *            IN: Location identifier
@@ -2504,11 +2566,12 @@ public class H5 implements java.io.Serializable {
      * @return a dataset identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Dopen(long loc_id, String name, long dapl_id) throws HDF5LibraryException,  NullPointerException
+    public static long H5Dopen(long loc_id, String name, long dapl_id)
+        throws HDF5LibraryException, NullPointerException
     {
         long id = _H5Dopen2(loc_id, name, dapl_id);
         if (id > 0) {
@@ -2520,16 +2583,17 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
-     * H5Dopen2 opens the existing dataset specified by a location identifier and name, loc_id and name, respectively.
+     * H5Dopen2 opens the existing dataset specified by a location identifier and name, loc_id and name,
+     * respectively.
      *
      * @see public static int H5Dopen(int loc_id, String name, int dapl_id)
      **/
     private synchronized static native long _H5Dopen2(long loc_id, String name, long dapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer buf.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer buf.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2549,17 +2613,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, byte[] obj, boolean isCriticalPinning) throws HDF5LibraryException,
-            NullPointerException;
+                                                  long file_space_id, long xfer_plist_id, byte[] obj,
+                                                  boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer buf.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer buf.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2577,19 +2642,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
-            long xfer_plist_id, byte[] buf) throws HDF5LibraryException, NullPointerException
+    public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id,
+                                           long file_space_id, long xfer_plist_id, byte[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer buf.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer buf.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2607,19 +2673,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
-            long xfer_plist_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException
+    public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id,
+                                           long file_space_id, long xfer_plist_id, Object obj)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
         return H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, obj, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * data object.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application data object.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2639,87 +2706,88 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Failure in the data conversion.
+     *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data object is null.
+     *            data object is null.
      **/
-    public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
-            long xfer_plist_id, Object obj, boolean isCriticalPinning) throws HDF5Exception, HDF5LibraryException,
-            NullPointerException
+    public synchronized static int H5Dread(long dataset_id, long mem_type_id, long mem_space_id,
+                                           long file_space_id, long xfer_plist_id, Object obj,
+                                           boolean isCriticalPinning)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
-        int status = -1;
+        int status   = -1;
         boolean is1D = false;
 
         Class dataClass = obj.getClass();
         if (!dataClass.isArray()) {
-            throw (new HDF5JavaException("H5Dread: data is not an array"));
+            throw(new HDF5JavaException("H5Dread: data is not an array"));
         }
 
         String cname = dataClass.getName();
-        is1D = (cname.lastIndexOf('[') == cname.indexOf('['));
-        char dname = cname.charAt(cname.lastIndexOf("[") + 1);
+        is1D         = (cname.lastIndexOf('[') == cname.indexOf('['));
+        char dname   = cname.charAt(cname.lastIndexOf("[") + 1);
         log.trace("H5Dread: cname={} is1D={} dname={}", cname, is1D, dname);
 
         if (is1D && (dname == 'B')) {
             log.trace("H5Dread_dname_B");
-            status = H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (byte[]) obj,
-                    isCriticalPinning);
+            status = H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (byte[])obj,
+                             isCriticalPinning);
         }
         else if (is1D && (dname == 'S')) {
             log.trace("H5Dread_dname_S");
-            status = H5Dread_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (short[]) obj,
-                    isCriticalPinning);
+            status = H5Dread_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                   (short[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'I')) {
             log.trace("H5Dread_dname_I");
-            status = H5Dread_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (int[]) obj,
-                    isCriticalPinning);
+            status = H5Dread_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                 (int[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'J')) {
             log.trace("H5Dread_dname_J");
-            status = H5Dread_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (long[]) obj,
-                    isCriticalPinning);
+            status = H5Dread_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                  (long[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'F')) {
             log.trace("H5Dread_dname_F");
-            status = H5Dread_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (float[]) obj,
-                    isCriticalPinning);
+            status = H5Dread_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                   (float[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'D')) {
             log.trace("H5Dread_dname_D");
             status = H5Dread_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
-                    (double[]) obj, isCriticalPinning);
+                                    (double[])obj, isCriticalPinning);
         }
         else if ((H5.H5Tdetect_class(mem_type_id, HDF5Constants.H5T_REFERENCE) &&
-                (is1D && (dataClass.getComponentType() == String.class))) ||
-                H5.H5Tequal(mem_type_id, HDF5Constants.H5T_STD_REF_DSETREG)) {
+                  (is1D && (dataClass.getComponentType() == String.class))) ||
+                 H5.H5Tequal(mem_type_id, HDF5Constants.H5T_STD_REF_DSETREG)) {
             log.trace("H5Dread_reg_ref");
             status = H5Dread_reg_ref(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
-                    (String[]) obj);
+                                     (String[])obj);
         }
         else if (is1D && (dataClass.getComponentType() == String.class)) {
             log.trace("H5Dread_string type");
             status = H5Dread_string(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
-                        (String[]) obj);
+                                    (String[])obj);
         }
         else {
             // Create a data buffer to hold the data into a Java Array
             HDFArray theArray = new HDFArray(obj);
-            byte[] buf = theArray.emptyBytes();
+            byte[] buf        = theArray.emptyBytes();
             log.trace("H5Dread_else");
 
             // will raise exception if read fails
             status = H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf,
-                    isCriticalPinning);
+                             isCriticalPinning);
             if (status >= 0) {
                 // convert the data into a Java Array
                 obj = theArray.arrayify(buf);
             }
 
             // clean up these: assign 'null' as hint to gc()
-            buf = null;
+            buf      = null;
             theArray = null;
         }
 
@@ -2727,8 +2795,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of type double.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of type double.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2748,17 +2816,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread_double(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, double[] buf, boolean isCriticalPinning)
-                    throws HDF5LibraryException, NullPointerException;
+                                                         long file_space_id, long xfer_plist_id, double[] buf,
+                                                         boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of type double.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of type double.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2776,19 +2845,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Dread_double(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, double[] buf) throws HDF5LibraryException, NullPointerException
+                                                  long file_space_id, long xfer_plist_id, double[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dread_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of float.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of float.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2808,17 +2878,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread_float(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, float[] buf, boolean isCriticalPinning)
-                    throws HDF5LibraryException, NullPointerException;
+                                                        long file_space_id, long xfer_plist_id, float[] buf,
+                                                        boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of float.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of float.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2836,19 +2907,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Dread_float(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, float[] buf) throws HDF5LibraryException, NullPointerException
+                                                 long file_space_id, long xfer_plist_id, float[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dread_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of int.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of int.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2868,17 +2940,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread_int(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, int[] buf, boolean isCriticalPinning) throws HDF5LibraryException,
-            NullPointerException;
+                                                      long file_space_id, long xfer_plist_id, int[] buf,
+                                                      boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of int.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of int.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2896,19 +2969,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Dread_int(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, int[] buf) throws HDF5LibraryException, NullPointerException
+                                               long file_space_id, long xfer_plist_id, int[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dread_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of long.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of long.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2928,17 +3002,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread_long(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, long[] buf, boolean isCriticalPinning) throws HDF5LibraryException,
-            NullPointerException;
+                                                       long file_space_id, long xfer_plist_id, long[] buf,
+                                                       boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of long.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of long.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2956,19 +3031,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Dread_long(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, long[] buf) throws HDF5LibraryException, NullPointerException
+                                                long file_space_id, long xfer_plist_id, long[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dread_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of string.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of string.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -2986,16 +3062,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Dread_reg_ref(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, String[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Dread_reg_ref(long dataset_id, long mem_type_id,
+                                                          long mem_space_id, long file_space_id,
+                                                          long xfer_plist_id, String[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of short.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of short.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3015,17 +3093,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread_short(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, short[] buf, boolean isCriticalPinning)
-                    throws HDF5LibraryException, NullPointerException;
+                                                        long file_space_id, long xfer_plist_id, short[] buf,
+                                                        boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of short.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of short.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3043,19 +3122,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static int H5Dread_short(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, short[] buf) throws HDF5LibraryException, NullPointerException
+                                                 long file_space_id, long xfer_plist_id, short[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dread_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of variable-lenght.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of variable-lenght.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3073,16 +3153,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5DreadVL(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, Object[] buf) throws HDF5LibraryException, NullPointerException;
+                                                    long file_space_id, long xfer_plist_id, Object[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of string.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of string.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3100,16 +3181,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
     public synchronized static native int H5Dread_string(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, String[] buf) throws HDF5LibraryException, NullPointerException;
+                                                         long file_space_id, long xfer_plist_id, String[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the application
-     * memory buffer of variable-lenght strings.
+     * H5Dread reads a (partial) dataset, specified by its identifier dataset_id, from the file into the
+     * application memory buffer of variable-lenght strings.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3127,15 +3209,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data buffer is null.
+     *            data buffer is null.
      **/
-    public synchronized static native int H5Dread_VLStrings(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, Object[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Dread_VLStrings(long dataset_id, long mem_type_id,
+                                                            long mem_space_id, long file_space_id,
+                                                            long xfer_plist_id, Object[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dset_extent sets the current dimensions of the chunked dataset dset_id to the sizes specified in size.
+     * H5Dset_extent sets the current dimensions of the chunked dataset dset_id to the sizes specified in
+     * size.
      *
      * @param dset_id
      *            IN: Chunked dataset identifier.
@@ -3143,17 +3228,17 @@ public class H5 implements java.io.Serializable {
      *            IN: Array containing the new magnitude of each dimension of the dataset.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      **/
-    public synchronized static native void H5Dset_extent(long dset_id, long size[]) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native void H5Dset_extent(long dset_id, long size[])
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dvlen_get_buf_size determines the number of bytes required to store the VL data from the dataset, using the
-     * space_id for the selection in the dataset on disk and the type_id for the memory representation of the VL data in
-     * memory.
+     * H5Dvlen_get_buf_size determines the number of bytes required to store the VL data from the dataset,
+     * using the space_id for the selection in the dataset on disk and the type_id for the memory
+     * representation of the VL data in memory.
      *
      * @param dset_id
      *            IN: Identifier of the dataset read from.
@@ -3165,12 +3250,12 @@ public class H5 implements java.io.Serializable {
      * @return the size in bytes of the memory buffer required to store the VL data.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
     public synchronized static native long H5Dvlen_get_buf_size(long dset_id, long type_id, long space_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Dvlen_reclaim reclaims buffer used for VL data.
@@ -3187,19 +3272,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      *
      * @deprecated As of HDF5 1.12.0 in favor of H5Treclaim
      **/
     @Deprecated
-    public synchronized static native int H5Dvlen_reclaim(long type_id, long space_id, long xfer_plist_id, byte[] buf)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Dvlen_reclaim(long type_id, long space_id, long xfer_plist_id,
+                                                          byte[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3219,17 +3305,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, byte[] buf, boolean isCriticalPinning) throws HDF5LibraryException,
-            NullPointerException;
+                                                   long file_space_id, long xfer_plist_id, byte[] buf,
+                                                   boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3247,19 +3334,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
-            long xfer_plist_id, byte[] buf) throws HDF5LibraryException, NullPointerException
+    public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id,
+                                            long file_space_id, long xfer_plist_id, byte[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3277,19 +3365,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
-            long xfer_plist_id, Object obj) throws HDF5Exception, HDF5LibraryException, NullPointerException
+    public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id,
+                                            long file_space_id, long xfer_plist_id, Object obj)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
         return H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, obj, true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory data
-     * object into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory data object into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3309,67 +3398,68 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Failure in the data conversion.
+     *            Failure in the data conversion.
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - data object is null.
+     *            data object is null.
      **/
-    public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
-            long xfer_plist_id, Object obj, boolean isCriticalPinning) throws HDF5Exception, HDF5LibraryException,
-            NullPointerException
+    public synchronized static int H5Dwrite(long dataset_id, long mem_type_id, long mem_space_id,
+                                            long file_space_id, long xfer_plist_id, Object obj,
+                                            boolean isCriticalPinning)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
     {
-        int status = -1;
+        int status   = -1;
         boolean is1D = false;
 
         Class dataClass = obj.getClass();
         if (!dataClass.isArray()) {
-            throw (new HDF5JavaException("H5Dwrite: data is not an array"));
+            throw(new HDF5JavaException("H5Dwrite: data is not an array"));
         }
 
         String cname = dataClass.getName();
-        is1D = (cname.lastIndexOf('[') == cname.indexOf('['));
-        char dname = cname.charAt(cname.lastIndexOf("[") + 1);
+        is1D         = (cname.lastIndexOf('[') == cname.indexOf('['));
+        char dname   = cname.charAt(cname.lastIndexOf("[") + 1);
 
         if (is1D && (dname == 'B')) {
-            status = H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (byte[]) obj,
-                    isCriticalPinning);
+            status = H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                              (byte[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'S')) {
-            status = H5Dwrite_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (short[]) obj,
-                    isCriticalPinning);
+            status = H5Dwrite_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                    (short[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'I')) {
-            status = H5Dwrite_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (int[]) obj,
-                    isCriticalPinning);
+            status = H5Dwrite_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                  (int[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'J')) {
-            status = H5Dwrite_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (long[]) obj,
-                    isCriticalPinning);
+            status = H5Dwrite_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                   (long[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'F')) {
-            status = H5Dwrite_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, (float[]) obj,
-                    isCriticalPinning);
+            status = H5Dwrite_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
+                                    (float[])obj, isCriticalPinning);
         }
         else if (is1D && (dname == 'D')) {
             status = H5Dwrite_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
-                    (double[]) obj, isCriticalPinning);
+                                     (double[])obj, isCriticalPinning);
         }
         else if (is1D && (dataClass.getComponentType() == String.class)) {
             log.trace("H5Dwrite_string type");
             status = H5Dwrite_string(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id,
-                        (String[]) obj);
+                                     (String[])obj);
         }
         else {
             HDFArray theArray = new HDFArray(obj);
-            byte[] buf = theArray.byteify();
+            byte[] buf        = theArray.byteify();
 
             // will raise exception on error
             status = H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf,
-                    isCriticalPinning);
+                              isCriticalPinning);
 
             // clean up these: assign 'null' as hint to gc()
-            buf = null;
+            buf      = null;
             theArray = null;
         }
 
@@ -3377,8 +3467,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3398,17 +3488,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Dwrite_double(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, double[] buf, boolean isCriticalPinning)
-                    throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int
+    H5Dwrite_double(long dataset_id, long mem_type_id, long mem_space_id, long file_space_id,
+                    long xfer_plist_id, double[] buf, boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3426,19 +3517,21 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static int H5Dwrite_double(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, double[] buf) throws HDF5LibraryException, NullPointerException
+                                                   long file_space_id, long xfer_plist_id, double[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
-        return H5Dwrite_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
+        return H5Dwrite_double(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf,
+                               true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3458,17 +3551,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Dwrite_float(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, float[] buf, boolean isCriticalPinning)
-                    throws HDF5LibraryException, NullPointerException;
+                                                         long file_space_id, long xfer_plist_id, float[] buf,
+                                                         boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3486,19 +3580,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static int H5Dwrite_float(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, float[] buf) throws HDF5LibraryException, NullPointerException
+                                                  long file_space_id, long xfer_plist_id, float[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dwrite_float(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3518,17 +3613,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Dwrite_int(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, int[] buf, boolean isCriticalPinning) throws HDF5LibraryException,
-            NullPointerException;
+                                                       long file_space_id, long xfer_plist_id, int[] buf,
+                                                       boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3546,19 +3642,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static int H5Dwrite_int(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, int[] buf) throws HDF5LibraryException, NullPointerException
+                                                long file_space_id, long xfer_plist_id, int[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dwrite_int(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3578,17 +3675,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Dwrite_long(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, long[] buf, boolean isCriticalPinning) throws HDF5LibraryException,
-            NullPointerException;
+                                                        long file_space_id, long xfer_plist_id, long[] buf,
+                                                        boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3606,19 +3704,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static int H5Dwrite_long(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, long[] buf) throws HDF5LibraryException, NullPointerException
+                                                 long file_space_id, long xfer_plist_id, long[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dwrite_long(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3638,17 +3737,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Dwrite_short(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, short[] buf, boolean isCriticalPinning)
-                    throws HDF5LibraryException, NullPointerException;
+                                                         long file_space_id, long xfer_plist_id, short[] buf,
+                                                         boolean isCriticalPinning)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3666,19 +3766,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static int H5Dwrite_short(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, short[] buf) throws HDF5LibraryException, NullPointerException
+                                                  long file_space_id, long xfer_plist_id, short[] buf)
+        throws HDF5LibraryException, NullPointerException
     {
         return H5Dwrite_short(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf, true);
     }
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3696,16 +3797,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Dwrite_string(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, String[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Dwrite_string(long dataset_id, long mem_type_id,
+                                                          long mem_space_id, long file_space_id,
+                                                          long xfer_plist_id, String[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application memory buffer
-     * into the file.
+     * H5Dwrite writes a (partial) dataset, specified by its identifier dataset_id, from the application
+     * memory buffer into the file.
      *
      * @param dataset_id
      *            Identifier of the dataset read from.
@@ -3723,16 +3826,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5DwriteVL(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, Object[] buf) throws HDF5LibraryException, NullPointerException;
+                                                     long file_space_id, long xfer_plist_id, Object[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dwrite_VLStrings writes a (partial) variable length String dataset, specified by its identifier dataset_id, from
-     * the application memory buffer buf into the file.
+     * H5Dwrite_VLStrings writes a (partial) variable length String dataset, specified by its identifier
+     * dataset_id, from the application memory buffer buf into the file.
      *
      * ---- contributed by Rosetta Biosoftware
      *
@@ -3752,48 +3856,52 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
 
-    public synchronized static native int H5Dwrite_VLStrings(long dataset_id, long mem_type_id, long mem_space_id,
-            long file_space_id, long xfer_plist_id, Object[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Dwrite_VLStrings(long dataset_id, long mem_type_id,
+                                                             long mem_space_id, long file_space_id,
+                                                             long xfer_plist_id, Object[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Dflush causes all buffers associated with a dataset to be immediately flushed to disk without removing the
-     * data from the cache.
+     * H5Dflush causes all buffers associated with a dataset to be immediately flushed to disk without
+     * removing the data from the cache.
      *
      * @param dset_id
      *            IN: Identifier of the dataset to be flushed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Dflush(long dset_id) throws HDF5LibraryException;
 
     /**
-     * H5Drefresh causes all buffers associated with a dataset to be cleared and immediately re-loaded with updated
-     * contents from disk. This function essentially closes the dataset, evicts all metadata associated with it
-     * from the cache, and then re-opens the dataset. The reopened dataset is automatically re-registered with the same ID.
+     * H5Drefresh causes all buffers associated with a dataset to be cleared and immediately re-loaded with
+     * updated contents from disk. This function essentially closes the dataset, evicts all metadata
+     * associated with it from the cache, and then re-opens the dataset. The reopened dataset is automatically
+     * re-registered with the same ID.
      *
      * @param dset_id
      *            IN: Identifier of the dataset to be refreshed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Drefresh(long dset_id) throws HDF5LibraryException;
 
     // /////// unimplemented ////////
-    //  herr_t H5Ddebug(hid_t dset_id);
-    //  herr_t H5Dget_chunk_storage_size(hid_t dset_id, const hsize_t *offset, hsize_t *chunk_bytes);
-    //  herr_t H5Dformat_convert(hid_t dset_id);
-    //  herr_t H5Dget_chunk_index_type(hid_t did, H5D_chunk_index_t *idx_type);
+    // herr_t H5Ddebug(hid_t dset_id);
+    // herr_t H5Dget_chunk_storage_size(hid_t dset_id, const hsize_t *offset, hsize_t *chunk_bytes);
+    // herr_t H5Dformat_convert(hid_t dset_id);
+    // herr_t H5Dget_chunk_index_type(hid_t did, H5D_chunk_index_t *idx_type);
 
     // herr_t H5Dgather(hid_t src_space_id, const void *src_buf, hid_t type_id,
     //                  size_t dst_buf_size, void *dst_buf, H5D_gather_func_t op, void *op_data);
-    // herr_t H5Dscatter(H5D_scatter_func_t op, void *op_data, hid_t type_id, hid_t dst_space_id, void *dst_buf);
+    // herr_t H5Dscatter(H5D_scatter_func_t op, void *op_data, hid_t type_id, hid_t dst_space_id, void
+    // *dst_buf);
 
     // ////////////////////////////////////////////////////////////
     // //
@@ -3802,58 +3910,57 @@ public class H5 implements java.io.Serializable {
     // ////////////////////////////////////////////////////////////
 
     /**
-     * H5Eauto_is_v2 determines whether the error auto reporting function for an error stack conforms to the H5E_auto2_t
-     * typedef or the H5E_auto1_t typedef.
+     * H5Eauto_is_v2 determines whether the error auto reporting function for an error stack conforms to the
+     * H5E_auto2_t typedef or the H5E_auto1_t typedef.
      *
      * @param stack_id
      *            IN: Error stack identifier.
      *
-     * @return boolean true if the error stack conforms to H5E_auto2_t and false if it conforms to H5E_auto1_t.
+     * @return boolean true if the error stack conforms to H5E_auto2_t and false if it conforms to
+     *            H5E_auto1_t.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Eauto_is_v2(long stack_id) throws HDF5LibraryException;
 
     /**
-     * H5Eclear clears the error stack for the current thread. H5Eclear can fail if there are problems initializing the
-     * library.
-     * 

-     * This may be used by exception handlers to assure that the error condition in the HDF-5 library has been reset.
+     * H5Eclear clears the error stack for the current thread. H5Eclear can fail if there are problems
+     * initializing the library. 
 This may be used by exception handlers to assure that the error condition
+     * in the HDF-5 library has been reset.
      *
      * @return Returns a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Eclear() throws HDF5LibraryException {
+    public static int H5Eclear() throws HDF5LibraryException
+    {
         H5Eclear2(HDF5Constants.H5E_DEFAULT);
         return 0;
     }
 
     /**
-     * H5Eclear clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the error stack
-     * for the current thread.
+     * H5Eclear clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the
+     * error stack for the current thread.
      *
      * @param stack_id
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static void H5Eclear(long stack_id) throws HDF5LibraryException {
-        H5Eclear2(stack_id);
-    }
+    public static void H5Eclear(long stack_id) throws HDF5LibraryException { H5Eclear2(stack_id); }
 
     /**
-     * H5Eclear2 clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the error stack
-     * for the current thread.
+     * H5Eclear2 clears the error stack specified by estack_id, or, if estack_id is set to H5E_DEFAULT, the
+     * error stack for the current thread.
      *
      * @param stack_id
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Eclear2(long stack_id) throws HDF5LibraryException;
 
@@ -3864,7 +3971,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error message identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Eclose_msg(long err_id) throws HDF5LibraryException;
 
@@ -3875,7 +3982,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Eclose_stack(long stack_id) throws HDF5LibraryException;
 
@@ -3892,12 +3999,12 @@ public class H5 implements java.io.Serializable {
      * @return a message identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - msg is null.
+     *            msg is null.
      **/
     public synchronized static native long H5Ecreate_msg(long cls_id, int msg_type, String msg)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Ecreate_stack creates a new empty error stack and returns the new stack's identifier.
@@ -3905,7 +4012,7 @@ public class H5 implements java.io.Serializable {
      * @return an error stack identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Ecreate_stack() throws HDF5LibraryException;
 
@@ -3918,30 +4025,31 @@ public class H5 implements java.io.Serializable {
      * @return the name of the error class
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native String H5Eget_class_name(long class_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Eget_current_stack copies the current error stack and returns an error stack identifier for the new copy.
+     * H5Eget_current_stack copies the current error stack and returns an error stack identifier for the new
+     * copy.
      *
      * @return an error stack identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Eget_current_stack() throws HDF5LibraryException;
 
     /**
-     * H5Eset_current_stack replaces the content of the current error stack with a copy of the content of the error
-     * stack specified by estack_id.
+     * H5Eset_current_stack replaces the content of the current error stack with a copy of the content of the
+     * error stack specified by estack_id.
      *
      * @param stack_id
      *            IN: Error stack identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Eset_current_stack(long stack_id) throws HDF5LibraryException;
 
@@ -3956,13 +4064,14 @@ public class H5 implements java.io.Serializable {
      * @return the error message
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native String H5Eget_msg(long msg_id, int[] type_list) throws HDF5LibraryException;
+    public synchronized static native String H5Eget_msg(long msg_id, int[] type_list)
+        throws HDF5LibraryException;
 
     /**
-     * H5Eget_num retrieves the number of error records in the error stack specified by estack_id (including major,
-     * minor messages and description).
+     * H5Eget_num retrieves the number of error records in the error stack specified by estack_id (including
+     * major, minor messages and description).
      *
      * @param stack_id
      *            IN: Error stack identifier.
@@ -3970,26 +4079,29 @@ public class H5 implements java.io.Serializable {
      * @return the number of error messages
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Eget_num(long stack_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native long H5Eget_num(long stack_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Eprint2 prints the error stack specified by estack_id on the specified stream, stream.
      *
      * @param stack_id
-     *            IN: Error stack identifier.If the identifier is H5E_DEFAULT, the current error stack will be printed.
+     *            IN: Error stack identifier.If the identifier is H5E_DEFAULT, the current error stack will be
+     *                printed.
      * @param stream
      *            IN: File pointer, or stderr if null.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Eprint2(long stack_id, Object stream) throws HDF5LibraryException;
+    public synchronized static native void H5Eprint2(long stack_id, Object stream)
+        throws HDF5LibraryException;
 
     /**
-     * H5Epop deletes the number of error records specified in count from the top of the error stack specified by
-     * estack_id (including major, minor messages and description).
+     * H5Epop deletes the number of error records specified in count from the top of the error stack specified
+     * by estack_id (including major, minor messages and description).
      *
      * @param stack_id
      *            IN: Error stack identifier.
@@ -3997,11 +4109,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Version of the client library or application to which the error class belongs.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Epop(long stack_id, long count) throws HDF5LibraryException;
 
-
     /**
      * H5Epush pushes a new error record onto the error stack specified by estack_id.
      *
@@ -4023,14 +4134,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Error description string.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - file, func, or msg is null.
-      **/
-    public static void H5Epush(long stack_id, String file, String func, int line,
-                long cls_id, long maj_id, long min_id, String msg) throws HDF5LibraryException, NullPointerException
+     *            file, func, or msg is null.
+     **/
+    public static void H5Epush(long stack_id, String file, String func, int line, long cls_id, long maj_id,
+                               long min_id, String msg) throws HDF5LibraryException, NullPointerException
     {
-             H5Epush2(stack_id, file, func, line, cls_id, maj_id, min_id, msg);
+        H5Epush2(stack_id, file, func, line, cls_id, maj_id, min_id, msg);
     }
     /**
      * H5Epush2 pushes a new error record onto the error stack specified by estack_id.
@@ -4053,16 +4164,17 @@ public class H5 implements java.io.Serializable {
      *            IN: Error description string.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - file, func, or msg is null.
-      **/
+     *            file, func, or msg is null.
+     **/
     public synchronized static native void H5Epush2(long stack_id, String file, String func, int line,
-                long cls_id, long maj_id, long min_id, String msg) throws HDF5LibraryException, NullPointerException;
+                                                    long cls_id, long maj_id, long min_id, String msg)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Eregister_class registers a client library or application program to the HDF5 error API so that the client
-     * library or application program can report errors together with HDF5 library.
+     * H5Eregister_class registers a client library or application program to the HDF5 error API so that the
+     * client library or application program can report errors together with HDF5 library.
      *
      * @param cls_name
      *            IN: Name of the error class.
@@ -4074,12 +4186,12 @@ public class H5 implements java.io.Serializable {
      * @return a class identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native long H5Eregister_class(String cls_name, String lib_name, String version)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Eunregister_class removes the error class specified by class_id.
@@ -4088,7 +4200,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Error class identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Eunregister_class(long class_id) throws HDF5LibraryException;
 
@@ -4106,13 +4218,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Data to be passed with func.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - func is null.
+     *            func is null.
      **/
-    public static void H5Ewalk(long stack_id, long direction, H5E_walk_cb func, H5E_walk_t client_data) throws HDF5LibraryException, NullPointerException
+    public static void H5Ewalk(long stack_id, long direction, H5E_walk_cb func, H5E_walk_t client_data)
+        throws HDF5LibraryException, NullPointerException
     {
-            H5Ewalk2(stack_id, direction, func, client_data);
+        H5Ewalk2(stack_id, direction, func, client_data);
     }
     /**
      * H5Ewalk2 walks the error stack specified by estack_id for the current thread and calls the
@@ -4128,12 +4241,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Data to be passed with func.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - func is null.
+     *            func is null.
      **/
-    public synchronized static native void H5Ewalk2(long stack_id, long direction, H5E_walk_cb func, H5E_walk_t client_data)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Ewalk2(long stack_id, long direction, H5E_walk_cb func,
+                                                    H5E_walk_t client_data)
+        throws HDF5LibraryException, NullPointerException;
 
     // /////// unimplemented ////////
     // public interface H5E_auto2_t extends Callback
@@ -4176,9 +4290,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Fclose(long file_id) throws HDF5LibraryException {
+    public static int H5Fclose(long file_id) throws HDF5LibraryException
+    {
         if (file_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -4203,12 +4318,13 @@ public class H5 implements java.io.Serializable {
      * @return a file identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Fopen(String name, int flags, long access_id) throws HDF5LibraryException,
-            NullPointerException {
+    public static long H5Fopen(String name, int flags, long access_id)
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Fopen(name, flags, access_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Fopen add {}", id);
@@ -4219,7 +4335,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Fopen(String name, int flags, long access_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Freopen reopens an HDF5 file.
@@ -4227,11 +4343,13 @@ public class H5 implements java.io.Serializable {
      * @param file_id
      *            Identifier of a file to terminate and reopen access to.
      *
-     * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
      * @return a new file identifier if successful
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Freopen(long file_id) throws HDF5LibraryException {
+    public static long H5Freopen(long file_id) throws HDF5LibraryException
+    {
         long id = _H5Freopen(file_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Freopen add {}", id);
@@ -4256,7 +4374,8 @@ public class H5 implements java.io.Serializable {
      *            
  • 
      *            H5F_ACC_RDONLY Allow read-only access to file.
    • 
      *            
  • 
-     *            H5F_ACC_TRUNC Truncate file, if it already exists, erasing all data previously stored in the file.
    • 
+     *            H5F_ACC_TRUNC Truncate file, if it already exists, erasing all data previously stored in the
+     *                          file.
      *            
  • 
      *            H5F_ACC_EXCL Fail if file already exists.
    • 
      *            
  • 
@@ -4264,22 +4383,23 @@ public class H5 implements java.io.Serializable {
      *            
      *
      * @param create_id
-     *            File creation property list identifier, used when modifying default file meta-data. Use H5P_DEFAULT
-     *            for default access properties.
+     *            File creation property list identifier, used when modifying default file meta-data. Use
+     *            H5P_DEFAULT for default access properties.
      * @param access_id
-     *            File access property list identifier. If parallel file access is desired, this is a collective call
-     *            according to the communicator stored in the access_id (not supported in Java). Use H5P_DEFAULT for
-     *            default access properties.
+     *            File access property list identifier. If parallel file access is desired, this is a
+     *            collective call according to the communicator stored in the access_id (not supported
+     *            in Java). Use H5P_DEFAULT for default access properties.
      *
      * @return a file identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Fcreate(String name, int flags, long create_id, long access_id) throws HDF5LibraryException,
-            NullPointerException {
+    public static long H5Fcreate(String name, int flags, long create_id, long access_id)
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Fcreate(name, flags, create_id, access_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Fcreate add {}", id);
@@ -4290,34 +4410,30 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Fcreate(String name, int flags, long create_id, long access_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Fflush causes all buffers associated with a file or object to be immediately flushed (written) to disk without
-     * removing the data from the (memory) cache.
-     * 
    
-     * After this call completes, the file (or object) is in a consistent state and all data written to date is assured
-     * to be permanent.
+     * H5Fflush causes all buffers associated with a file or object to be immediately flushed (written) to
+     * disk without removing the data from the (memory) cache. 
     After this call completes, the file (or
+     * object) is in a consistent state and all data written to date is assured to be permanent.
      *
      * @param object_id
-     *            Identifier of object used to identify the file. object_id can be any object associated with the
-     *            file, including the file itself, a dataset, a group, an attribute, or a named data type.
+     *            Identifier of object used to identify the file. object_id can be any object
+     *            associated with the file, including the file itself, a dataset, a group, an attribute,
+     *            or a named data type.
      * @param scope
-     *            specifies the scope of the flushing action, in the case that the HDF-5 file is not a single physical
-     *            file.
-     *            
    
-     *            Valid values are:
+     *            specifies the scope of the flushing action, in the case that the HDF-5 file is not a single
+     *            physical file.
+     *            
     Valid values are:
      *            
      
-     *            
    • 
-     *            H5F_SCOPE_GLOBAL Flushes the entire virtual file.
      • 
-     *            
    • 
-     *            H5F_SCOPE_LOCAL Flushes only the specified file.
      • 
+     *            
    •  H5F_SCOPE_GLOBAL Flushes the entire virtual file.
      • 
+     *            
    •  H5F_SCOPE_LOCAL Flushes only the specified file.
      • 
      *            
    
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Fflush(long object_id, int scope) throws HDF5LibraryException;
 
@@ -4330,9 +4446,10 @@ public class H5 implements java.io.Serializable {
      * @return a file access property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Fget_access_plist(long file_id) throws HDF5LibraryException {
+    public static long H5Fget_access_plist(long file_id) throws HDF5LibraryException
+    {
         long id = _H5Fget_access_plist(file_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Fget_access_plist add {}", id);
@@ -4345,8 +4462,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Fget_access_plist(long file_id) throws HDF5LibraryException;
 
     /**
-     * H5Fget_create_plist returns a file creation property list identifier identifying the creation properties used to
-     * create this file.
+     * H5Fget_create_plist returns a file creation property list identifier identifying the creation
+     * properties used to create this file.
      *
      * @param file_id
      *            Identifier of the file to get creation property list
@@ -4354,9 +4471,10 @@ public class H5 implements java.io.Serializable {
      * @return a file creation property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Fget_create_plist(long file_id) throws HDF5LibraryException {
+    public static long H5Fget_create_plist(long file_id) throws HDF5LibraryException
+    {
         long id = _H5Fget_create_plist(file_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Fget_create_plist add {}", id);
@@ -4379,7 +4497,7 @@ public class H5 implements java.io.Serializable {
      * @return the file size of the HDF5 file
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Fget_filesize(long file_id) throws HDF5LibraryException;
 
@@ -4392,7 +4510,7 @@ public class H5 implements java.io.Serializable {
      * @return the amount of free space in the file
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Fget_freespace(long file_id) throws HDF5LibraryException;
 
@@ -4405,7 +4523,7 @@ public class H5 implements java.io.Serializable {
      * @return the intended access mode flag, as originally passed with H5Fopen.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Fget_intent(long file_id) throws HDF5LibraryException;
 
@@ -4418,13 +4536,13 @@ public class H5 implements java.io.Serializable {
      * @return the unique file number for the file.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Fget_fileno(long file_id) throws HDF5LibraryException;
 
     /**
-     * H5Fget_mdc_hit_rate queries the metadata cache of the target file to obtain its hit rate (cache hits / (cache
-     * hits + cache misses)) since the last time hit rate statistics were reset.
+     * H5Fget_mdc_hit_rate queries the metadata cache of the target file to obtain its hit rate (cache hits /
+     * (cache hits + cache misses)) since the last time hit rate statistics were reset.
      *
      * @param file_id
      *            IN: Identifier of the target file.
@@ -4432,7 +4550,7 @@ public class H5 implements java.io.Serializable {
      * @return the double in which the hit rate is returned.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native double H5Fget_mdc_hit_rate(long file_id) throws HDF5LibraryException;
 
@@ -4452,12 +4570,12 @@ public class H5 implements java.io.Serializable {
      * @return current number of entries in the cache
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - metadata_cache is null.
+     *            metadata_cache is null.
      **/
     public synchronized static native int H5Fget_mdc_size(long file_id, long[] metadata_cache)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Fget_name retrieves the name of the file to which the object obj_id belongs.
@@ -4468,7 +4586,7 @@ public class H5 implements java.io.Serializable {
      * @return the filename.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native String H5Fget_name(long obj_id) throws HDF5LibraryException;
 
@@ -4492,12 +4610,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of open objects.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Fget_obj_count(long file_id, int types) throws HDF5LibraryException;
+    public synchronized static native long H5Fget_obj_count(long file_id, int types)
+        throws HDF5LibraryException;
 
     /**
-     * H5Fget_obj_ids returns the list of identifiers for all open HDF5 objects fitting the specified criteria.
+     * H5Fget_obj_ids returns the list of identifiers for all open HDF5 objects fitting the specified
+     * criteria.
      *
      * @param file_id
      *            IN: File identifier for a currently-open HDF5 file
@@ -4511,12 +4631,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of objects placed into obj_id_list.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - obj_id_list is null.
+     *            obj_id_list is null.
      **/
-    public synchronized static native long H5Fget_obj_ids(long file_id, int types, long max_objs, long[] obj_id_list)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native long H5Fget_obj_ids(long file_id, int types, long max_objs,
+                                                          long[] obj_id_list)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Fis_hdf5 determines whether a file is in the HDF5 format.
@@ -4527,14 +4648,15 @@ public class H5 implements java.io.Serializable {
      * @return true if is HDF-5, false if not.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      *
      * @deprecated As of HDF5 1.10.5 in favor of H5Fis_accessible.
      **/
     @Deprecated
-    public synchronized static native boolean H5Fis_hdf5(String name) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native boolean H5Fis_hdf5(String name)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Fis_accessible determines if the file can be opened with the given fapl.
@@ -4547,15 +4669,16 @@ public class H5 implements java.io.Serializable {
      * @return true if file is accessible, false if not.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native boolean H5Fis_accessible(String name, long file_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native boolean H5Fis_accessible(String name, long file_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Fmount mounts the file specified by child_id onto the group specified by loc_id and name using the mount
-     * properties plist_id.
+     * H5Fmount mounts the file specified by child_id onto the group specified by loc_id and name using the
+     * mount properties plist_id.
      *
      * @param loc_id
      *            The identifier for the group onto which the file specified by child_id is to be mounted.
@@ -4569,12 +4692,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Fmount(long loc_id, String name, long child_id, long plist_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * Given a mount point, H5Funmount disassociates the mount point's file from the file mounted there.
@@ -4587,24 +4710,25 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Funmount(long loc_id, String name) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Funmount(long loc_id, String name)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Freset_mdc_hit_rate_stats resets the hit rate statistics counters in the metadata cache associated with the
-     * specified file.
+     * H5Freset_mdc_hit_rate_stats resets the hit rate statistics counters in the metadata cache associated
+     * with the specified file.
      *
      * @param file_id
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Freset_mdc_hit_rate_stats(long file_id) throws HDF5LibraryException;
+    public synchronized static native void H5Freset_mdc_hit_rate_stats(long file_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Fget_info returns global information for the file associated with the
@@ -4614,7 +4738,8 @@ public class H5 implements java.io.Serializable {
      *
      * @return A buffer(H5F_info2_t) for current "global" information about file
      *
-     * @exception HDF5LibraryException - Error from the HDF-5 Library.
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native H5F_info2_t H5Fget_info(long obj_id) throws HDF5LibraryException;
 
@@ -4626,19 +4751,20 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Fclear_elink_file_cache(long file_id) throws HDF5LibraryException;
+    public synchronized static native void H5Fclear_elink_file_cache(long file_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Fstart_swmr_write will activate SWMR writing mode for a file associated with file_id. This routine will
-     * prepare and ensure the file is safe for SWMR writing.
+     * H5Fstart_swmr_write will activate SWMR writing mode for a file associated with file_id. This routine
+     * will prepare and ensure the file is safe for SWMR writing.
      *
      * @param file_id
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Fstart_swmr_write(long file_id) throws HDF5LibraryException;
 
@@ -4649,18 +4775,19 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Fstart_mdc_logging(long file_id) throws HDF5LibraryException;
 
     /**
-     * H5Fstop_mdc_logging stops logging metadata cache events if logging was previously enabled and is currently ongoing.
+     * H5Fstop_mdc_logging stops logging metadata cache events if logging was previously enabled and is
+     * currently ongoing.
      *
      * @param file_id
      *            IN: Identifier of the target file.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Fstop_mdc_logging(long file_id) throws HDF5LibraryException;
 
@@ -4676,12 +4803,13 @@ public class H5 implements java.io.Serializable {
      *             mdc_logging_status[1] = is_currently_logging, whether events are currently being logged
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *             Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - mdc_logging_status is null.
+     *            mdc_logging_status is null.
      **/
-    public synchronized static native void H5Fget_mdc_logging_status(long file_id, boolean[] mdc_logging_status)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Fget_mdc_logging_status(long file_id,
+                                                                     boolean[] mdc_logging_status)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Fget_dset_no_attrs_hint gets the file-level setting to create minimized dataset object headers.
@@ -4692,11 +4820,10 @@ public class H5 implements java.io.Serializable {
      * @return true if the file-level is set to create minimized dataset object headers, false if not.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Fget_dset_no_attrs_hint(long file_id)
-            throws HDF5LibraryException;
-
+        throws HDF5LibraryException;
 
     /**
      * H5Fset_dset_no_attrs_hint sets the file-level setting to create minimized dataset object headers.
@@ -4704,14 +4831,13 @@ public class H5 implements java.io.Serializable {
      * @param file_id
      *            IN: Identifier of the target file.
      * @param minimize
-     *          the minimize hint setting
+     *            the minimize hint setting
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Fset_dset_no_attrs_hint(long file_id, boolean minimize)
-            throws HDF5LibraryException;
-
+        throws HDF5LibraryException;
 
     /**
      * H5Fset_libver_bounds sets a different low and high bounds while a file is open.
@@ -4724,17 +4850,18 @@ public class H5 implements java.io.Serializable {
      *            IN: The latest version of the library that will be used for writing objects.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Fset_libver_bounds(long file_id, int low, int high)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     // /////// unimplemented ////////
     //  herr_t H5Fget_eoa(hid_t file_id, haddr_t *eoa);
     //  herr_t H5Fincrement_filesize(hid_t file_id, hsize_t increment);
     // ssize_t H5Fget_file_image(hid_t file_id, void * buf_ptr, size_t buf_len);
     // herr_t H5Fget_metadata_read_retry_info(hid_t file_id, H5F_retry_info_t *info);
-    // ssize_t H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects, H5F_sect_info_t *sect_info/*out*/);
+    // ssize_t H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects, H5F_sect_info_t
+    // *sect_info/*out*/);
     //  herr_t H5Fformat_convert(hid_t fid);
     //  herr_t H5Freset_page_buffering_stats(hid_t file_id);
     //  herr_t H5Fget_page_buffering_stats(hid_t file_id, unsigned accesses[2],
@@ -4814,11 +4941,10 @@ public class H5 implements java.io.Serializable {
     //  herr_t H5FDset_eoa(H5FD_t *file, H5FD_mem_t type, haddr_t eoa);
     //  haddr_t H5FDget_eof(H5FD_t *file, H5FD_mem_t type);
     //  herr_t H5FDget_vfd_handle(H5FD_t *file, hid_t fapl, void**file_handle);
-    //  herr_t H5FDread(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, void *buf/*out*/);
-    //  herr_t H5FDwrite(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, const void *buf);
-    //  herr_t H5FDflush(H5FD_t *file, hid_t dxpl_id, hbool_t closing);
-    //  herr_t H5FDtruncate(H5FD_t *file, hid_t dxpl_id, hbool_t closing);
-    //  herr_t H5FDlock(H5FD_t *file, hbool_t rw);
+    //  herr_t H5FDread(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t size, void
+    //  *buf/*out*/); herr_t H5FDwrite(H5FD_t *file, H5FD_mem_t type, hid_t dxpl_id, haddr_t addr, size_t
+    //  size, const void *buf); herr_t H5FDflush(H5FD_t *file, hid_t dxpl_id, hbool_t closing); herr_t
+    //  H5FDtruncate(H5FD_t *file, hid_t dxpl_id, hbool_t closing); herr_t H5FDlock(H5FD_t *file, hbool_t rw);
     //  herr_t H5FDunlock(H5FD_t *file);
     //  herr_t H5FDdriver_query(hid_t driver_id, unsigned long *flags/*out*/);
 
@@ -4845,9 +4971,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Gclose(long group_id) throws HDF5LibraryException {
+    public static int H5Gclose(long group_id) throws HDF5LibraryException
+    {
         if (group_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -4871,18 +4998,19 @@ public class H5 implements java.io.Serializable {
      * @param gcpl_id
      *            IN: Identifier of group creation property list.
      * @param gapl_id
-     *            IN: Identifier of group access property list. (No group access properties have been implemented at
-     *            this time; use H5P_DEFAULT.)
+     *            IN: Identifier of group access property list. (No group access properties have been
+     *implemented at this time; use H5P_DEFAULT.)
      *
      * @return a valid group identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public static long H5Gcreate(long loc_id, String name, long lcpl_id, long gcpl_id, long gapl_id)
-            throws HDF5LibraryException, NullPointerException {
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Gcreate2(loc_id, name, lcpl_id, gcpl_id, gapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Gcreate add {}", id);
@@ -4893,7 +5021,8 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Gcreate2(long loc_id, String name, long lcpl_id, long gcpl_id,
-            long gapl_id) throws HDF5LibraryException, NullPointerException;
+                                                        long gapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Gcreate_anon creates a new empty group in the file specified by loc_id.
@@ -4903,15 +5032,16 @@ public class H5 implements java.io.Serializable {
      * @param gcpl_id
      *            IN: Identifier of group creation property list.
      * @param gapl_id
-     *            IN: Identifier of group access property list. (No group access properties have been implemented at
-     *            this time; use H5P_DEFAULT.)
+     *            IN: Identifier of group access property list. (No group access properties have been
+     *                implemented at this time; use H5P_DEFAULT.)
      *
      * @return a valid group identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Gcreate_anon(long loc_id, long gcpl_id, long gapl_id) throws HDF5LibraryException {
+    public static long H5Gcreate_anon(long loc_id, long gcpl_id, long gapl_id) throws HDF5LibraryException
+    {
         long id = _H5Gcreate_anon(loc_id, gcpl_id, gapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Gcreate_anon add {}", id);
@@ -4922,11 +5052,11 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Gcreate_anon(long loc_id, long gcpl_id, long gapl_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Gget_create_plist returns an identifier for the group creation property list associated with the group
-     * specified by group_id.
+     * H5Gget_create_plist returns an identifier for the group creation property list associated with the
+     * group specified by group_id.
      *
      * @param group_id
      *            IN: Identifier of the group.
@@ -4934,13 +5064,13 @@ public class H5 implements java.io.Serializable {
      * @return an identifier for the group's creation property list
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Gget_create_plist(long group_id) throws HDF5LibraryException;
 
     /**
-     * H5Gget_info retrieves information about the group specified by group_id. The information is returned in the
-     * group_info struct.
+     * H5Gget_info retrieves information about the group specified by group_id. The information is returned in
+     * the group_info struct.
      *
      * @param group_id
      *            IN: Identifier of the group.
@@ -4948,12 +5078,13 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native H5G_info_t H5Gget_info(long group_id) throws HDF5LibraryException;
 
     /**
-     * H5Gget_info_by_idx retrieves information about a group, according to the group's position within an index.
+     * H5Gget_info_by_idx retrieves information about a group, according to the group's position within an
+     * index.
      *
      * @param group_id
      *            IN: File or group identifier.
@@ -4971,16 +5102,18 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5G_info_t H5Gget_info_by_idx(long group_id, String group_name, int idx_type,
-            int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5G_info_t H5Gget_info_by_idx(long group_id, String group_name,
+                                                                    int idx_type, int order, long n,
+                                                                    long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Gget_info_by_name retrieves information about the group group_name located in the file or group specified by
-     * loc_id.
+     * H5Gget_info_by_name retrieves information about the group group_name located in the file or group
+     * specified by loc_id.
      *
      * @param group_id
      *            IN: File or group identifier.
@@ -4992,15 +5125,16 @@ public class H5 implements java.io.Serializable {
      * @return a structure in which group information is returned
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native H5G_info_t H5Gget_info_by_name(long group_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * retrieves information of all objects under the group (name) located in the file or group specified by loc_id.
+     * retrieves information of all objects under the group (name) located in the file or group specified by
+     * loc_id.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -5016,21 +5150,25 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static int H5Gget_obj_info_all(long loc_id, String name, String[] objNames, int[] objTypes,
-            H5O_token_t[] tokens) throws HDF5LibraryException, NullPointerException {
+    public synchronized static int H5Gget_obj_info_all(long loc_id, String name, String[] objNames,
+                                                       int[] objTypes, H5O_token_t[] tokens)
+        throws HDF5LibraryException, NullPointerException
+    {
         if (objNames == null) {
             throw new NullPointerException("H5Gget_obj_info_all(): name array is null");
         }
 
-        return H5Gget_obj_info_all(loc_id, name, objNames, objTypes, null, null, tokens, HDF5Constants.H5_INDEX_NAME);
+        return H5Gget_obj_info_all(loc_id, name, objNames, objTypes, null, null, tokens,
+                                   HDF5Constants.H5_INDEX_NAME);
     }
 
     /**
-     * retrieves information of all objects under the group (name) located in the file or group specified by loc_id.
+     * retrieves information of all objects under the group (name) located in the file or group specified by
+     * loc_id.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -5050,17 +5188,21 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static int H5Gget_obj_info_all(long loc_id, String name, String[] objNames, int[] objTypes,
-            int[] ltype, H5O_token_t[] tokens, int indx_type) throws HDF5LibraryException, NullPointerException {
+    public synchronized static int H5Gget_obj_info_all(long loc_id, String name, String[] objNames,
+                                                       int[] objTypes, int[] ltype, H5O_token_t[] tokens,
+                                                       int indx_type)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Gget_obj_info_full(loc_id, name, objNames, objTypes, ltype, null, tokens, indx_type, -1);
     }
 
     /**
-     * retrieves information of all objects under the group (name) located in the file or group specified by loc_id.
+     * retrieves information of all objects under the group (name) located in the file or group specified by
+     * loc_id.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -5082,17 +5224,21 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static int H5Gget_obj_info_all(long loc_id, String name, String[] objNames, int[] objTypes,
-            int[] ltype, long[] fno, H5O_token_t[] tokens, int indx_type) throws HDF5LibraryException, NullPointerException {
+    public synchronized static int H5Gget_obj_info_all(long loc_id, String name, String[] objNames,
+                                                       int[] objTypes, int[] ltype, long[] fno,
+                                                       H5O_token_t[] tokens, int indx_type)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Gget_obj_info_full(loc_id, name, objNames, objTypes, ltype, fno, tokens, indx_type, -1);
     }
 
     /**
-     * retrieves information of all objects under the group (name) located in the file or group specified by loc_id.
+     * retrieves information of all objects under the group (name) located in the file or group specified by
+     * loc_id.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -5116,13 +5262,15 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static int H5Gget_obj_info_full(long loc_id, String name, String[] objNames, int[] objTypes,
-            int[] ltype, long[] fno, H5O_token_t[] tokens, int indx_type, int indx_order) throws HDF5LibraryException,
-            NullPointerException {
+    public synchronized static int H5Gget_obj_info_full(long loc_id, String name, String[] objNames,
+                                                        int[] objTypes, int[] ltype, long[] fno,
+                                                        H5O_token_t[] tokens, int indx_type, int indx_order)
+        throws HDF5LibraryException, NullPointerException
+    {
         if (objNames == null) {
             throw new NullPointerException("H5Gget_obj_info_full(): name array is null");
         }
@@ -5152,21 +5300,22 @@ public class H5 implements java.io.Serializable {
             indx_order = HDF5Constants.H5_ITER_INC;
 
         log.trace("H5Gget_obj_info_full: objNames_len={}", objNames.length);
-        int status = H5Gget_obj_info_full(loc_id, name, objNames, objTypes, ltype, fno, tokens, objNames.length, indx_type,
-                indx_order);
+        int status = H5Gget_obj_info_full(loc_id, name, objNames, objTypes, ltype, fno, tokens,
+                                          objNames.length, indx_type, indx_order);
         for (int indx = 0; indx < objNames.length; indx++)
             log.trace("H5Gget_obj_info_full: objNames={}", objNames[indx]);
         return status;
     }
 
-    private synchronized static native int H5Gget_obj_info_full(long loc_id, String name, String[] objNames, int[] objTypes,
-            int[] ltype, long[] fno, H5O_token_t[] tokens, int n, int indx_type, int indx_order) throws HDF5LibraryException,
-            NullPointerException;
+    private synchronized static native int
+    H5Gget_obj_info_full(long loc_id, String name, String[] objNames, int[] objTypes, int[] ltype, long[] fno,
+                         H5O_token_t[] tokens, int n, int indx_type, int indx_order)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Gget_obj_info_idx report the name and type of object with index 'idx' in a Group. The 'idx' corresponds to the
-     * index maintained by H5Giterate. Each link is returned, so objects with multiple links will be counted once for
-     * each link.
+     * H5Gget_obj_info_idx report the name and type of object with index 'idx' in a Group. The 'idx'
+     * corresponds to the index maintained by H5Giterate. Each link is returned, so objects with multiple
+     * links will be counted once for each link.
      *
      * @param loc_id
      *            IN: file or group ID.
@@ -5182,19 +5331,21 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful, -1 if not.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static int H5Gget_obj_info_idx(long loc_id, String name, int idx, String[] oname, int[] type)
-            throws HDF5LibraryException, NullPointerException {
+    public synchronized static int H5Gget_obj_info_idx(long loc_id, String name, int idx, String[] oname,
+                                                       int[] type)
+        throws HDF5LibraryException, NullPointerException
+    {
         String n[] = new String[1];
-        n[0] = new String("");
-        oname[0] = H5Lget_name_by_idx(loc_id, name, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, idx,
-                HDF5Constants.H5P_DEFAULT);
-        H5L_info_t info = H5Lget_info_by_idx(loc_id, name, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, idx,
-                HDF5Constants.H5P_DEFAULT);
-        type[0] = info.type;
+        n[0]       = new String("");
+        oname[0]   = H5Lget_name_by_idx(loc_id, name, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC,
+                                      idx, HDF5Constants.H5P_DEFAULT);
+        H5L_info_t info = H5Lget_info_by_idx(loc_id, name, HDF5Constants.H5_INDEX_NAME,
+                                             HDF5Constants.H5_ITER_INC, idx, HDF5Constants.H5P_DEFAULT);
+        type[0]         = info.type;
         return 0;
     }
 
@@ -5204,8 +5355,8 @@ public class H5 implements java.io.Serializable {
      * a lot of time to finish if the number of objects is more than 10,000
      */
     /**
-     * retrieves information of all objects (recurvisely) under the group (name) located in the file or group specified
-     * by loc_id up to maximum specified by objMax.
+     * retrieves information of all objects (recurvisely) under the group (name) located in the file or group
+     * specified by loc_id up to maximum specified by objMax.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -5223,12 +5374,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of items found
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static int H5Gget_obj_info_max(long loc_id, String[] objNames, int[] objTypes, int[] lnkTypes,
-            H5O_token_t[] objToken, long objMax) throws HDF5LibraryException, NullPointerException {
+    public synchronized static int H5Gget_obj_info_max(long loc_id, String[] objNames, int[] objTypes,
+                                                       int[] lnkTypes, H5O_token_t[] objToken, long objMax)
+        throws HDF5LibraryException, NullPointerException
+    {
         if (objNames == null) {
             throw new NullPointerException("H5Gget_obj_info_max(): name array is null");
         }
@@ -5256,12 +5409,15 @@ public class H5 implements java.io.Serializable {
         return H5Gget_obj_info_max(loc_id, objNames, objTypes, lnkTypes, objToken, objMax, objNames.length);
     }
 
-    private synchronized static native int H5Gget_obj_info_max(long loc_id, String[] oname, int[] otype, int[] ltype,
-            H5O_token_t[] tokens, long amax, int n) throws HDF5LibraryException, NullPointerException;
+    private synchronized static native int H5Gget_obj_info_max(long loc_id, String[] oname, int[] otype,
+                                                               int[] ltype, H5O_token_t[] tokens, long amax,
+                                                               int n)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Gn_members report the number of objects in a Group. The 'objects' include everything that will be visited by
-     * H5Giterate. Each link is returned, so objects with multiple links will be counted once for each link.
+     * H5Gn_members report the number of objects in a Group. The 'objects' include everything that will be
+     * visited by H5Giterate. Each link is returned, so objects with multiple links will be counted once for
+     * each link.
      *
      * @param loc_id
      *            file or group ID.
@@ -5271,18 +5427,19 @@ public class H5 implements java.io.Serializable {
      * @return the number of members in the group or -1 if error.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      */
-    public synchronized static long H5Gn_members(long loc_id, String name) throws HDF5LibraryException,
-            NullPointerException {
+    public synchronized static long H5Gn_members(long loc_id, String name)
+        throws HDF5LibraryException, NullPointerException
+    {
         long grp_id = H5Gopen(loc_id, name, HDF5Constants.H5P_DEFAULT);
-        long n = -1;
+        long n      = -1;
 
         try {
             H5G_info_t info = H5.H5Gget_info(grp_id);
-            n = info.nlinks;
+            n               = info.nlinks;
         }
         finally {
             H5Gclose(grp_id);
@@ -5304,12 +5461,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid group identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Gopen(long loc_id, String name, long gapl_id) throws HDF5LibraryException,
-    NullPointerException {
+    public static long H5Gopen(long loc_id, String name, long gapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Gopen2(loc_id, name, gapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Gopen add {}", id);
@@ -5320,7 +5478,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Gopen2(long loc_id, String name, long gapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Gflush causes all buffers associated with a group to be immediately flushed to disk without
@@ -5330,7 +5488,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the group to be flushed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Gflush(long group_id) throws HDF5LibraryException;
 
@@ -5344,7 +5502,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the group to be refreshed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Grefresh(long group_id) throws HDF5LibraryException;
 
@@ -5387,7 +5545,7 @@ public class H5 implements java.io.Serializable {
      * @return the file ID.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Iget_file_id(long obj_id) throws HDF5LibraryException;
 
@@ -5405,11 +5563,11 @@ public class H5 implements java.io.Serializable {
      * @return the length of the name retrieved.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     @Deprecated
     public synchronized static native long H5Iget_name_long(long obj_id, String[] name, long size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
     /**
      * H5Iget_name retrieves the name of an object specified by the identifier, obj_id.
      *
@@ -5419,10 +5577,9 @@ public class H5 implements java.io.Serializable {
      * @return String for Attribute name.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native String H5Iget_name(long obj_id)
-            throws HDF5LibraryException;
+    public synchronized static native String H5Iget_name(long obj_id) throws HDF5LibraryException;
 
     /**
      * H5Iget_ref obtains the number of references outstanding specified by the identifier, obj_id.
@@ -5433,13 +5590,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Iget_ref(long obj_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Iget_ref(long obj_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Idec_ref decrements the reference count specified by the identifier, obj_id.
-     *            If the reference count for an ID reaches zero, the object will be closed.
+     * If the reference count for an ID reaches zero, the object will be closed.
      *
      * @param obj_id
      *            IN: Identifier of the object.
@@ -5447,9 +5605,10 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Idec_ref(long obj_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Idec_ref(long obj_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Iinc_ref increments the reference count specified by the identifier, obj_id.
@@ -5460,9 +5619,10 @@ public class H5 implements java.io.Serializable {
      * @return the reference count.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Iinc_ref(long obj_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Iinc_ref(long obj_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Iget_type retrieves the type of the object identified by obj_id.
@@ -5473,13 +5633,13 @@ public class H5 implements java.io.Serializable {
      * @return the object type if successful; otherwise H5I_BADID.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Iget_type(long obj_id) throws HDF5LibraryException;
 
     /**
-     * H5Iget_type_ref retrieves the reference count on an ID type. The reference count is used by the library to
-     * indicate when an ID type can be destroyed.
+     * H5Iget_type_ref retrieves the reference count on an ID type. The reference count is used by the library
+     * to indicate when an ID type can be destroyed.
      *
      * @param type_id
      *            IN: The identifier of the type whose reference count is to be retrieved
@@ -5487,13 +5647,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Iget_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
-     * H5Idec_type_ref decrements the reference count on an identifier type. The reference count is used by the
-     * library to indicate when an identifier type can be destroyed. If the reference count reaches zero,
+     * H5Idec_type_ref decrements the reference count on an identifier type. The reference count is used by
+     * the library to indicate when an identifier type can be destroyed. If the reference count reaches zero,
      * this function will destroy it.
      *
      * @param type_id
@@ -5502,13 +5662,13 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Idec_type_ref(long type_id) throws HDF5LibraryException;
 
     /**
-     * H5Iinc_type_ref increments the reference count on an ID type. The reference count is used by the library
-     * to indicate when an ID type can be destroyed.
+     * H5Iinc_type_ref increments the reference count on an ID type. The reference count is used by the
+     * library to indicate when an ID type can be destroyed.
      *
      * @param type_id
      *            IN: The identifier of the type whose reference count is to be incremented
@@ -5516,7 +5676,7 @@ public class H5 implements java.io.Serializable {
      * @return The current reference count on success, negative on failure.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Iinc_type_ref(long type_id) throws HDF5LibraryException;
 
@@ -5529,7 +5689,7 @@ public class H5 implements java.io.Serializable {
      * @return Number of identifiers of the specified identifier type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Inmembers(long type_id) throws HDF5LibraryException;
 
@@ -5542,7 +5702,7 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the specified identifier id is valid
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Iis_valid(long obj_id) throws HDF5LibraryException;
 
@@ -5555,11 +5715,10 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the specified identifier type exists
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Itype_exists(int type_id) throws HDF5LibraryException;
 
-
     /**
      * H5Iclear_type deletes all identifiers of the type identified by the argument type.
      *
@@ -5569,9 +5728,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether or not to force deletion of all identifiers
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Iclear_type(int type_id, boolean force) throws HDF5LibraryException;
+    public synchronized static native void H5Iclear_type(int type_id, boolean force)
+        throws HDF5LibraryException;
 
     /**
      * H5Idestroy_type deletes an entire identifier type. All identifiers of this type are destroyed
@@ -5581,7 +5741,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of identifier type which is to be destroyed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Idestroy_type(int type_id) throws HDF5LibraryException;
 
@@ -5604,7 +5764,6 @@ public class H5 implements java.io.Serializable {
     // typedef herr_t (*H5I_iterate_func_t)(hid_t id, void *udata);
     // herr_t H5Iiterate(H5I_type_t type, H5I_iterate_func_t op, void *op_data);
 
-
     // //////////////////////////////////////////////////////////////////
     // H5L: Link Interface Functions //
     // //////////////////////////////////////////////////////////////////
@@ -5626,16 +5785,17 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native void H5Lcopy(long src_loc, String src_name, long dst_loc, String dst_name,
-            long lcpl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Lcopy(long src_loc, String src_name, long dst_loc,
+                                                   String dst_name, long lcpl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Lcreate_external creates a new soft link to an external object, which is an object in a different HDF5 file
-     * from the location of the link.
+     * H5Lcreate_external creates a new soft link to an external object, which is an object in a different
+     * HDF5 file from the location of the link.
      *
      * @param file_name
      *            IN: Name of the target file containing the target object.
@@ -5651,12 +5811,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native void H5Lcreate_external(String file_name, String obj_name, long link_loc_id,
-            String link_name, long lcpl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Lcreate_external(String file_name, String obj_name,
+                                                              long link_loc_id, String link_name,
+                                                              long lcpl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lcreate_hard creates a new hard link to a pre-existing object in an HDF5 file.
@@ -5675,12 +5837,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - cur_name or dst_name is null.
+     *            cur_name or dst_name is null.
      **/
-    public synchronized static native void H5Lcreate_hard(long cur_loc, String cur_name, long dst_loc, String dst_name,
-            long lcpl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Lcreate_hard(long cur_loc, String cur_name, long dst_loc,
+                                                          String dst_name, long lcpl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lcreate_soft creates a new soft link to an object in an HDF5 file.
@@ -5697,12 +5860,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - link_name is null.
+     *            link_name is null.
      **/
-    public synchronized static native void H5Lcreate_soft(String link_target, long link_loc_id, String link_name,
-            long lcpl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Lcreate_soft(String link_target, long link_loc_id,
+                                                          String link_name, long lcpl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Ldelete removes the link specified from a group.
@@ -5715,15 +5879,16 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native void H5Ldelete(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Ldelete_by_idx removes the nth link in a group according to the specified order and in the specified index.
+     * H5Ldelete_by_idx removes the nth link in a group according to the specified order and in the specified
+     * index.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of subject group
@@ -5739,12 +5904,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - group_name is null.
+     *            group_name is null.
      **/
-    public synchronized static native void H5Ldelete_by_idx(long loc_id, String group_name, int idx_type, int order,
-            long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Ldelete_by_idx(long loc_id, String group_name, int idx_type,
+                                                            int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lexists checks if a link with a particular name exists in a group.
@@ -5759,12 +5925,12 @@ public class H5 implements java.io.Serializable {
      * @return a boolean, true if the name exists, otherwise false.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native boolean H5Lexists(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lget_info returns information about the specified link.
@@ -5779,16 +5945,16 @@ public class H5 implements java.io.Serializable {
      * @return a buffer(H5L_info_t) for the link information.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native H5L_info_t H5Lget_info(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Lget_info_by_idx opens a named datatype at the location specified by loc_id and return an identifier for the
-     * datatype.
+     * H5Lget_info_by_idx opens a named datatype at the location specified by loc_id and return an identifier
+     * for the datatype.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of subject group
@@ -5806,16 +5972,18 @@ public class H5 implements java.io.Serializable {
      * @return a buffer(H5L_info_t) for the link information.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - group_name is null.
+     *            group_name is null.
      **/
-    public synchronized static native H5L_info_t H5Lget_info_by_idx(long loc_id, String group_name, int idx_type,
-            int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5L_info_t H5Lget_info_by_idx(long loc_id, String group_name,
+                                                                    int idx_type, int order, long n,
+                                                                    long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Lget_name_by_idx retrieves name of the nth link in a group, according to the order within a specified field or
-     * index.
+     * H5Lget_name_by_idx retrieves name of the nth link in a group, according to the order within a specified
+     * field or index.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of subject group
@@ -5833,12 +6001,13 @@ public class H5 implements java.io.Serializable {
      * @return a String for the link name.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - group_name is null.
+     *            group_name is null.
      **/
     public synchronized static native String H5Lget_name_by_idx(long loc_id, String group_name, int idx_type,
-            int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+                                                                int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lget_value returns the link value of a symbolic link. Note that this function is a combination
@@ -5856,12 +6025,13 @@ public class H5 implements java.io.Serializable {
      * @return the link type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Lget_value(long loc_id, String name, String[] link_value, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Lget_value(long loc_id, String name, String[] link_value,
+                                                       long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lget_value_by_idx retrieves value of the nth link in a group, according to the order within an index.
@@ -5886,12 +6056,14 @@ public class H5 implements java.io.Serializable {
      * @return the link type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - group_name is null.
+     *            group_name is null.
      **/
-    public synchronized static native int H5Lget_value_by_idx(long loc_id, String group_name, int idx_type, int order,
-            long n, String[] link_value, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Lget_value_by_idx(long loc_id, String group_name, int idx_type,
+                                                              int order, long n, String[] link_value,
+                                                              long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Literate iterates through links in a group.
@@ -5909,14 +6081,15 @@ public class H5 implements java.io.Serializable {
      * @param op_data
      *            IN: User-defined pointer to data required by the application for its processing of the link
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Literate(long grp_id, int idx_type, int order, long idx, H5L_iterate_t op,
-            H5L_iterate_opdata_t op_data) throws HDF5LibraryException;
+    public synchronized static native int H5Literate(long grp_id, int idx_type, int order, long idx,
+                                                     H5L_iterate_t op, H5L_iterate_opdata_t op_data)
+        throws HDF5LibraryException;
 
     /**
      * H5Literate_by_name iterates through links in a group.
@@ -5938,17 +6111,18 @@ public class H5 implements java.io.Serializable {
      * @param lapl_id
      *            IN: Link access property list identifier
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - group_name is null.
+     *            group_name is null.
      **/
-    public synchronized static native int H5Literate_by_name(long grp_id, String group_name, int idx_type, int order,
-            long idx, H5L_iterate_t op, H5L_iterate_opdata_t op_data, long lapl_id) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native int H5Literate_by_name(long grp_id, String group_name, int idx_type,
+                                                             int order, long idx, H5L_iterate_t op,
+                                                             H5L_iterate_opdata_t op_data, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lmove renames a link within an HDF5 file.
@@ -5967,12 +6141,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier to be associated with the new link.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native void H5Lmove(long src_loc, String src_name, long dst_loc, String dst_name,
-            long lcpl_id, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Lmove(long src_loc, String src_name, long dst_loc,
+                                                   String dst_name, long lcpl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lvisit recursively visits all links starting from a specified group.
@@ -5988,14 +6163,14 @@ public class H5 implements java.io.Serializable {
      * @param op_data
      *            IN: User-defined pointer to data required by the application for its processing of the link
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Lvisit(long grp_id, int idx_type, int order, H5L_iterate_t op,
-            H5L_iterate_opdata_t op_data) throws HDF5LibraryException;
+                                                   H5L_iterate_opdata_t op_data) throws HDF5LibraryException;
 
     /**
      * H5Lvisit_by_name recursively visits all links starting from a specified group.
@@ -6015,17 +6190,18 @@ public class H5 implements java.io.Serializable {
      * @param lapl_id
      *            IN: link access property
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - group_name is null.
+     *            group_name is null.
      **/
-    public synchronized static native int H5Lvisit_by_name(long loc_id, String group_name, int idx_type, int order,
-            H5L_iterate_t op, H5L_iterate_opdata_t op_data, long lapl_id) throws HDF5LibraryException, NullPointerException;
-
+    public synchronized static native int H5Lvisit_by_name(long loc_id, String group_name, int idx_type,
+                                                           int order, H5L_iterate_t op,
+                                                           H5L_iterate_opdata_t op_data, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Lis_registered tests whether a user-defined link class is currently registered,
@@ -6035,21 +6211,23 @@ public class H5 implements java.io.Serializable {
      *            IN: User-defined link class identifier
      *
      * @return Returns a positive value if the link class has been registered and zero if it is unregistered.
-     *         Otherwise returns a negative value; this may mean that the identifier is not a valid user-defined class identifier.
+     *            Otherwise returns a negative value; this may mean that the identifier is not a valid
+     *            user-defined class identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Lis_registered(int link_cls_id) throws HDF5LibraryException;
 
     /**
-     * H5Lunregister unregisters a class of user-defined links, preventing them from being traversed, queried, moved, etc.
+     * H5Lunregister unregisters a class of user-defined links, preventing them from being traversed, queried,
+     * moved, etc.
      *
      * @param link_cls_id
      *            IN: User-defined link class identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Lunregister(int link_cls_id) throws HDF5LibraryException;
 
@@ -6093,9 +6271,10 @@ public class H5 implements java.io.Serializable {
      * @return non-negative on success
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Oclose(long object_id) throws HDF5LibraryException {
+    public static int H5Oclose(long object_id) throws HDF5LibraryException
+    {
         if (object_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -6108,8 +6287,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native int _H5Oclose(long object_id) throws HDF5LibraryException;
 
     /**
-     * H5Ocopy copies the group, dataset or named datatype specified from the file or group specified by source location
-     * to the destination location.
+     * H5Ocopy copies the group, dataset or named datatype specified from the file or group specified by
+     * source location to the destination location.
      *
      * @param src_loc_id
      *            IN: Object identifier indicating the location of the source object to be copied
@@ -6125,12 +6304,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Link creation property list for the new hard link
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native void H5Ocopy(long src_loc_id, String src_name, long dst_loc_id, String dst_name,
-            long ocpypl_id, long lcpl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Ocopy(long src_loc_id, String src_name, long dst_loc_id,
+                                                   String dst_name, long ocpypl_id, long lcpl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Oget_comment retrieves the comment for the specified object.
@@ -6141,9 +6321,10 @@ public class H5 implements java.io.Serializable {
      * @return the comment
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native String H5Oget_comment(long obj_id) throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native String H5Oget_comment(long obj_id)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Oset_comment sets the comment for the specified object.
@@ -6154,12 +6335,13 @@ public class H5 implements java.io.Serializable {
      *            IN: The new comment.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      * @deprecated As of HDF5 1.8 in favor of object attributes.
      **/
     @Deprecated
-    public synchronized static native void H5Oset_comment(long obj_id, String comment) throws HDF5LibraryException;
+    public synchronized static native void H5Oset_comment(long obj_id, String comment)
+        throws HDF5LibraryException;
 
     /**
      * H5Oget_comment_by_name retrieves the comment for an object.
@@ -6174,12 +6356,12 @@ public class H5 implements java.io.Serializable {
      * @return the comment
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native String H5Oget_comment_by_name(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, IllegalArgumentException, NullPointerException;
+        throws HDF5LibraryException, IllegalArgumentException, NullPointerException;
 
     /**
      * H5Oset_comment_by_name sets the comment for the specified object.
@@ -6194,15 +6376,16 @@ public class H5 implements java.io.Serializable {
      *            IN: Link access property list identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      *
      * @deprecated As of HDF5 1.8 in favor of object attributes.
      **/
     @Deprecated
-    public synchronized static native void H5Oset_comment_by_name(long loc_id, String name, String comment, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Oset_comment_by_name(long loc_id, String name, String comment,
+                                                                  long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Oget_info retrieves the metadata for an object specified by an identifier.
@@ -6213,12 +6396,12 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static H5O_info_t H5Oget_info(long loc_id) throws HDF5LibraryException,
-            NullPointerException {
+    public static H5O_info_t H5Oget_info(long loc_id) throws HDF5LibraryException, NullPointerException
+    {
         return H5Oget_info(loc_id, HDF5Constants.H5O_INFO_ALL);
     }
 
@@ -6233,38 +6416,41 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5O_info_t H5Oget_info(long loc_id, int fields) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native H5O_info_t H5Oget_info(long loc_id, int fields)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and relative name.
+     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
+     * relative name.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of group in which object is located
      * @param name
      *            IN: Relative name of group
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public static H5O_info_t H5Oget_info_by_name(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException {
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Oget_info_by_name(loc_id, name, HDF5Constants.H5O_INFO_ALL, lapl_id);
     }
 
     /**
-     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and relative name.
+     * H5Oget_info_by_name retrieves the metadata for an object, identifying the object by location and
+     * relative name.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of group in which object is located
@@ -6273,18 +6459,19 @@ public class H5 implements java.io.Serializable {
      * @param fields
      *            IN: Object fields to select
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5O_info_t H5Oget_info_by_name(long loc_id, String name, int fields, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5O_info_t H5Oget_info_by_name(long loc_id, String name, int fields,
+                                                                     long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Oget_info_by_idx retrieves the metadata for an object, identifying the object by an index position.
@@ -6300,19 +6487,22 @@ public class H5 implements java.io.Serializable {
      * @param n
      *            IN: Object to open
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static H5O_info_t H5Oget_info_by_idx(long loc_id, String group_name, int idx_type,
-            int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException {
-        return H5Oget_info_by_idx(loc_id, group_name, idx_type, order, n, HDF5Constants.H5O_INFO_ALL, lapl_id);
+    public static H5O_info_t H5Oget_info_by_idx(long loc_id, String group_name, int idx_type, int order,
+                                                long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        return H5Oget_info_by_idx(loc_id, group_name, idx_type, order, n, HDF5Constants.H5O_INFO_ALL,
+                                  lapl_id);
     }
 
     /**
@@ -6331,22 +6521,25 @@ public class H5 implements java.io.Serializable {
      * @param fields
      *            IN: Object fields to select
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5O_info_t H5Oget_info_by_idx(long loc_id, String group_name, int idx_type,
-            int order, long n, int fields, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5O_info_t H5Oget_info_by_idx(long loc_id, String group_name,
+                                                                    int idx_type, int order, long n,
+                                                                    int fields, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an identifier.
-     * Native HDF5-specific metadata includes things like object header information and object storage layout information.
+     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an
+     * identifier. Native HDF5-specific metadata includes things like object header information and object
+     * storage layout information.
      *
      * @param loc_id
      *            IN: Identifier for target object
@@ -6354,18 +6547,20 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static H5O_native_info_t H5Oget_native_info(long loc_id) throws HDF5LibraryException,
-            NullPointerException {
+    public static H5O_native_info_t H5Oget_native_info(long loc_id)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Oget_native_info(loc_id, HDF5Constants.H5O_NATIVE_INFO_ALL);
     }
 
     /**
-     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an identifier.
-     * Native HDF5-specific metadata includes things like object header information and object storage layout information.
+     * H5Oget_native_info retrieves the native HDF5-specific metadata for an HDF5 object specified by an
+     * identifier. Native HDF5-specific metadata includes things like object header information and object
+     * storage layout information.
      *
      * @param loc_id
      *            IN: Identifier for target object
@@ -6375,42 +6570,43 @@ public class H5 implements java.io.Serializable {
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5O_native_info_t H5Oget_native_info(long loc_id, int fields) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native H5O_native_info_t H5Oget_native_info(long loc_id, int fields)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying the object
-     * by location and relative name. Native HDF5-specific metadata includes things like object header information and
-     * object storage layout information.
+     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by location and relative name. Native HDF5-specific metadata includes things like object
+     * header information and object storage layout information.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of group in which object is located
      * @param name
      *            IN: Relative name of group
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public static H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException {
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Oget_native_info_by_name(loc_id, name, HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
     }
 
     /**
-     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying the object
-     * by location and relative name. Native HDF5-specific metadata includes things like object header information and
-     * object storage layout information.
+     * H5Oget_native_info_by_name retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by location and relative name. Native HDF5-specific metadata includes things like object
+     * header information and object storage layout information.
      *
      * @param loc_id
      *            IN: File or group identifier specifying location of group in which object is located
@@ -6419,23 +6615,24 @@ public class H5 implements java.io.Serializable {
      * @param fields
      *            IN: Object fields to select
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name, int fields, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5O_native_info_t H5Oget_native_info_by_name(long loc_id, String name,
+                                                                                   int fields, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying the object
-     * by an index position. Native HDF5-specific metadata includes things like object header information and
-     * object storage layout information.
+     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by an index position. Native HDF5-specific metadata includes things like object header
+     * information and object storage layout information.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -6448,25 +6645,28 @@ public class H5 implements java.io.Serializable {
      * @param n
      *            IN: Object to open
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public static H5O_native_info_t H5Oget_native_info_by_idx(long loc_id, String group_name, int idx_type,
-            int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException {
-        return H5Oget_native_info_by_idx(loc_id, group_name, idx_type, order, n, HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
+                                                              int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        return H5Oget_native_info_by_idx(loc_id, group_name, idx_type, order, n,
+                                         HDF5Constants.H5O_NATIVE_INFO_ALL, lapl_id);
     }
 
     /**
-     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying the object
-     * by an index position. Native HDF5-specific metadata includes things like object header information and
-     * object storage layout information.
+     * H5Oget_native_info_by_idx retrieves the native HDF5-specific metadata for an HDF5 object, identifying
+     * the object by an index position. Native HDF5-specific metadata includes things like object header
+     * information and object storage layout information.
      *
      * @param loc_id
      *            IN: File or group identifier
@@ -6481,18 +6681,19 @@ public class H5 implements java.io.Serializable {
      * @param fields
      *            IN: Object fields to select
      * @param lapl_id
-     *            IN: Access property list identifier for the link pointing to the object (Not currently used; pass as
-     *            H5P_DEFAULT.)
+     *            IN: Access property list identifier for the link pointing to the object (Not currently used;
+     *                pass as H5P_DEFAULT.)
      *
      * @return object information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native H5O_native_info_t H5Oget_native_info_by_idx(long loc_id, String group_name, int idx_type,
-            int order, long n, int fields, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5O_native_info_t H5Oget_native_info_by_idx(
+        long loc_id, String group_name, int idx_type, int order, long n, int fields, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Olink creates a new hard link to an object in an HDF5 file.
@@ -6509,12 +6710,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Access property list identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native void H5Olink(long obj_id, long new_loc_id, String new_name, long lcpl_id,
-            long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Olink(long obj_id, long new_loc_id, String new_name,
+                                                   long lcpl_id, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Oopen opens a group, dataset, or named datatype specified by a location and a path name.
@@ -6529,11 +6731,13 @@ public class H5 implements java.io.Serializable {
      * @return an object identifier for the opened object
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Oopen(long loc_id, String name, long lapl_id) throws HDF5LibraryException, NullPointerException {
+    public static long H5Oopen(long loc_id, String name, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Oopen(loc_id, name, lapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Oopen add {}", id);
@@ -6544,7 +6748,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Oopen(long loc_id, String name, long lapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Ovisit recursively visits all objects accessible from a specified object.
@@ -6558,18 +6762,20 @@ public class H5 implements java.io.Serializable {
      * @param op
      *            IN: Callback function passing data regarding the object to the calling application
      * @param op_data
-     *            IN: User-defined pointer to data required by the application for its processing of the object
+     *            IN: User-defined pointer to data required by the application for its processing of the
+     *                object
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static int H5Ovisit(long obj_id, int idx_type, int order, H5O_iterate_t op, H5O_iterate_opdata_t op_data)
-            throws HDF5LibraryException, NullPointerException {
+    public static int H5Ovisit(long obj_id, int idx_type, int order, H5O_iterate_t op,
+                               H5O_iterate_opdata_t op_data) throws HDF5LibraryException, NullPointerException
+    {
         return H5Ovisit(obj_id, idx_type, order, op, op_data, HDF5Constants.H5O_INFO_ALL);
     }
 
@@ -6585,20 +6791,22 @@ public class H5 implements java.io.Serializable {
      * @param op
      *            IN: Callback function passing data regarding the object to the calling application
      * @param op_data
-     *            IN: User-defined pointer to data required by the application for its processing of the object
+     *            IN: User-defined pointer to data required by the application for its processing of the
+     *                object
      * @param fields
      *            IN: Object fields to select
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Ovisit(long obj_id, int idx_type, int order, H5O_iterate_t op,
-            H5O_iterate_opdata_t op_data, int fields) throws HDF5LibraryException, NullPointerException;
+                                                   H5O_iterate_opdata_t op_data, int fields)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Ovisit_by_name recursively visits all objects starting from a specified object.
@@ -6614,21 +6822,25 @@ public class H5 implements java.io.Serializable {
      * @param op
      *            IN: Callback function passing data regarding the object to the calling application
      * @param op_data
-     *            IN: User-defined pointer to data required by the application for its processing of the object
+     *            IN: User-defined pointer to data required by the application for its processing of the
+     *                object
      * @param lapl_id
      *            IN: Link access property list identifier
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public static int H5Ovisit_by_name(long loc_id, String obj_name, int idx_type, int order,
-            H5O_iterate_t op, H5O_iterate_opdata_t op_data, long lapl_id) throws HDF5LibraryException, NullPointerException {
-        return H5Ovisit_by_name(loc_id, obj_name, idx_type, order, op, op_data, HDF5Constants.H5O_INFO_ALL, lapl_id);
+                                       H5O_iterate_t op, H5O_iterate_opdata_t op_data, long lapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
+        return H5Ovisit_by_name(loc_id, obj_name, idx_type, order, op, op_data, HDF5Constants.H5O_INFO_ALL,
+                                lapl_id);
     }
 
     /**
@@ -6645,23 +6857,25 @@ public class H5 implements java.io.Serializable {
      * @param op
      *            IN: Callback function passing data regarding the object to the calling application
      * @param op_data
-     *            IN: User-defined pointer to data required by the application for its processing of the object
+     *            IN: User-defined pointer to data required by the application for its processing of the
+     *                object
      * @param fields
      *            IN: Object fields to select
      * @param lapl_id
      *            IN: Link access property list identifier
      *
-     * @return returns the return value of the first operator that returns a positive value, or zero if all members were
-     *         processed with no operator returning non-zero.
+     * @return returns the return value of the first operator that returns a positive value, or zero if all
+     *            members were processed with no operator returning non-zero.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native int H5Ovisit_by_name(long loc_id, String obj_name, int idx_type, int order,
-            H5O_iterate_t op, H5O_iterate_opdata_t op_data, int fields, long lapl_id) throws HDF5LibraryException, NullPointerException;
-
+    public synchronized static native int
+    H5Ovisit_by_name(long loc_id, String obj_name, int idx_type, int order, H5O_iterate_t op,
+                     H5O_iterate_opdata_t op_data, int fields, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Oexists_by_name is used by an application to check that an existing link resolves to an object.
@@ -6677,41 +6891,50 @@ public class H5 implements java.io.Serializable {
      * @return Returns TRUE or FALSE if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public synchronized static native boolean H5Oexists_by_name(long loc_id, String obj_name, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native boolean H5Oexists_by_name(long loc_id, String obj_name, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Odecr_refcount decrements the hard link reference count for an object.
      *
-     * @param object_id IN: Object identifier
+     * @param object_id
+     *            IN: Object identifier
      *
-     * @exception HDF5LibraryException - Error from the HDF-5 Library.
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Odecr_refcount(long object_id) throws HDF5LibraryException;
 
     /**
      * H5Oincr_refcount increments the hard link reference count for an object.
      *
-     * @param object_id IN: Object identifier
+     * @param object_id
+     *            IN: Object identifier
      *
-     * @exception HDF5LibraryException - Error from the HDF-5 Library.
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
      **/
-     public synchronized static native void H5Oincr_refcount(long object_id) throws HDF5LibraryException;
+    public synchronized static native void H5Oincr_refcount(long object_id) throws HDF5LibraryException;
 
     /**
      * H5Oopen_by_token opens a group, dataset, or named datatype using its object token within an HDF5 file.
      *
-     * @param loc_id IN: File or group identifier
-     * @param token IN: Object's token in the file
+     * @param loc_id
+     *            IN: File or group identifier
+     * @param token
+     *            IN: Object's token in the file
      *
      * @return an object identifier for the opened object
      *
-     * @exception HDF5LibraryException - Error from the HDF-5 Library.
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Oopen_by_token(long loc_id, H5O_token_t token) throws HDF5LibraryException {
+    public static long H5Oopen_by_token(long loc_id, H5O_token_t token) throws HDF5LibraryException
+    {
         long id = _H5Oopen_by_token(loc_id, token);
 
         if (id > 0) {
@@ -6724,25 +6947,34 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Oopen_by_token(long loc_id, H5O_token_t token)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Oopen_by_idx opens the nth object in the group specified.
      *
-     * @param loc_id IN: File or group identifier
-     * @param group_name IN: Name of group, relative to loc_id, in which object is located
-     * @param idx_type IN: Type of index by which objects are ordered
-     * @param order IN: Order of iteration within index
-     * @param n IN: Object to open
-     * @param lapl_id IN: Access property list identifier for the link pointing to the object
+     * @param loc_id
+     *            IN: File or group identifier
+     * @param group_name
+     *            IN: Name of group, relative to loc_id, in which object is located
+     * @param idx_type
+     *            IN: Type of index by which objects are ordered
+     * @param order
+     *            IN: Order of iteration within index
+     * @param n
+     *            IN: Object to open
+     * @param lapl_id
+     *            IN: Access property list identifier for the link pointing to the object
      *
      * @return an object identifier for the opened object
      *
-     * @exception HDF5LibraryException - Error from the HDF-5 Library.
-     * @exception NullPointerException - group_name is null.
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
+     * @exception NullPointerException
+     *            group_name is null.
      **/
-    public static long H5Oopen_by_idx(long loc_id, String group_name,
-            int idx_type, int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException {
+    public static long H5Oopen_by_idx(long loc_id, String group_name, int idx_type, int order, long n,
+                                      long lapl_id) throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Oopen_by_idx(loc_id, group_name, idx_type, order, n, lapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Oopen_by_idx add {}", id);
@@ -6752,51 +6984,54 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Oopen_by_idx(long loc_id, String group_name,
-            int idx_type, int order, long n, long lapl_id) throws HDF5LibraryException, NullPointerException;
+    private synchronized static native long _H5Oopen_by_idx(long loc_id, String group_name, int idx_type,
+                                                            int order, long n, long lapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Oflush causes all buffers associated with an object to be immediately flushed to disk without removing
-     * the data from the cache. object_id can be any named object associated with an HDF5 file including a
-     * dataset, a group, or a committed datatype.
+     * H5Oflush causes all buffers associated with an object to be immediately flushed to disk without
+     * removing the data from the cache. object_id can be any named object associated with an HDF5 file
+     * ncluding a dataset, a group, or a committed datatype.
      *
      * @param object_id
      *            IN: Identifier of the object to be flushed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Oflush(long object_id) throws HDF5LibraryException;
 
     /**
      * H5Orefresh causes all buffers associated with an object to be cleared and immediately re-loaded with
      * updated contents from disk. This function essentially closes the object, evicts all metadata associated
-     * with it from the cache, and then re-opens the object. The reopened object is automatically re-registered
-     * with the same ID. object_id can be any named object associated with an HDF5 file including a
-     * dataset, a group, or a committed datatype.
+     * with it from the cache, and then re-opens the object. The reopened object is automatically
+     * re-registered with the same ID. object_id can be any named object associated with an HDF5 file
+     * including a dataset, a group, or a committed datatype.
      *
      * @param object_id
      *            IN: Identifier of the object to be refreshed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Orefresh(long object_id) throws HDF5LibraryException;
 
     /**
-     * H5Odisable_mdc_flushes corks an object, keeping dirty entries associated with the object in the metadata cache.
+     * H5Odisable_mdc_flushes corks an object, keeping dirty entries associated with the object in the
+     * metadata cache.
      *
      * @param object_id
      *            IN: Identifier of the object to be corked.
      **/
-    public synchronized static native void  H5Odisable_mdc_flushes(long object_id);
+    public synchronized static native void H5Odisable_mdc_flushes(long object_id);
     /**
-     * H5Oenable_mdc_flushes uncorks an object, keeping dirty entries associated with the object in the metadata cache.
+     * H5Oenable_mdc_flushes uncorks an object, keeping dirty entries associated with the object in the
+     * metadata cache.
      *
      * @param object_id
      *            IN: Identifier of the object to be uncorked.
      **/
-    public synchronized static native void  H5Oenable_mdc_flushes(long object_id);
+    public synchronized static native void H5Oenable_mdc_flushes(long object_id);
     /**
      * H5Oare_mdc_flushes_disabled retrieve the object's "cork" status.
      *
@@ -6804,10 +7039,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the object to be flushed.
      *
      * @return the cork status
-     *             TRUE if mdc flushes for the object is disabled
-     *             FALSE if mdc flushes for the object is not disabled
+     *            TRUE if mdc flushes for the object is disabled
+     *            FALSE if mdc flushes for the object is not disabled
      **/
-    public synchronized static native boolean  H5Oare_mdc_flushes_disabled(long object_id);
+    public synchronized static native boolean H5Oare_mdc_flushes_disabled(long object_id);
 
     // /////// unimplemented ////////
     // herr_t H5Otoken_cmp(hid_t loc_id, const H5O_token_t *token1, const H5O_token_t *token2,
@@ -6831,7 +7066,7 @@ public class H5 implements java.io.Serializable {
      * @return name of a property list if successful; null if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native String H5Pget_class_name(long plid) throws HDF5LibraryException;
 
@@ -6844,9 +7079,10 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier (plist) if successful; otherwise Fail (-1).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Pcreate(long type) throws HDF5LibraryException {
+    public static long H5Pcreate(long type) throws HDF5LibraryException
+    {
         long id = _H5Pcreate(type);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Pcreate add {}", id);
@@ -6868,7 +7104,7 @@ public class H5 implements java.io.Serializable {
      * @return value for a property if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Pget(long plid, String name) throws HDF5LibraryException;
 
@@ -6884,9 +7120,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
-    public synchronized static native int H5Pset(long plid, String name, int value) throws HDF5LibraryException;
+    public synchronized static native int H5Pset(long plid, String name, int value)
+        throws HDF5LibraryException;
 
     /**
      * H5Pexist determines whether a property exists within a property list or class
@@ -6895,10 +7132,11 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier for the property to query
      * @param name
      *            IN: Name of property to check for
-     * @return a true value if the property exists in the property object; false if the property does not exist;
+     * @return a true value if the property exists in the property object; false if the property does not
+     *     exist;
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native boolean H5Pexist(long plid, String name) throws HDF5LibraryException;
 
@@ -6912,7 +7150,7 @@ public class H5 implements java.io.Serializable {
      * @return size of a property's value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native long H5Pget_size(long plid, String name) throws HDF5LibraryException;
 
@@ -6924,7 +7162,7 @@ public class H5 implements java.io.Serializable {
      * @return number of properties if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native long H5Pget_nprops(long plid) throws HDF5LibraryException;
 
@@ -6936,7 +7174,7 @@ public class H5 implements java.io.Serializable {
      * @return a property list class if successful. Otherwise returns H5P_ROOT (-1).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Pget_class(long plist) throws HDF5LibraryException;
 
@@ -6948,7 +7186,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid parent class object identifier if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native long H5Pget_class_parent(long plid) throws HDF5LibraryException;
 
@@ -6963,7 +7201,7 @@ public class H5 implements java.io.Serializable {
      * @return positive value if equal; zero if unequal, a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Pequal(long plid1, long plid2) throws HDF5LibraryException;
 
@@ -6978,9 +7216,10 @@ public class H5 implements java.io.Serializable {
      * @return TRUE if equal, FALSE if unequal
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
-    public static boolean H5P_equal(long plid1, long plid2) throws HDF5LibraryException {
+    public static boolean H5P_equal(long plid1, long plid2) throws HDF5LibraryException
+    {
         if (H5Pequal(plid1, plid2) == 1)
             return true;
         return false;
@@ -6996,7 +7235,7 @@ public class H5 implements java.io.Serializable {
      * @return a positive value if equal; zero if unequal; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Pisa_class(long plist, long pclass) throws HDF5LibraryException;
 
@@ -7012,10 +7251,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Pcopy_prop(long dst_id, long src_id, String name)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Premove removes a property from a property list
@@ -7027,7 +7266,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Premove(long plid, String name) throws HDF5LibraryException;
 
@@ -7041,7 +7280,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native int H5Punregister(long plid, String name) throws HDF5LibraryException;
 
@@ -7053,9 +7292,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
-    public static int H5Pclose_class(long plid) throws HDF5LibraryException {
+    public static int H5Pclose_class(long plid) throws HDF5LibraryException
+    {
         if (plid < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -7075,9 +7315,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Pclose(long plist) throws HDF5LibraryException {
+    public static int H5Pclose(long plist) throws HDF5LibraryException
+    {
         if (plist < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -7098,9 +7339,10 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Pcopy(long plist) throws HDF5LibraryException {
+    public static long H5Pcopy(long plist) throws HDF5LibraryException
+    {
         long id = _H5Pcopy(plist);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Pcopy add {}", id);
@@ -7144,11 +7386,12 @@ public class H5 implements java.io.Serializable {
      * @return a property list identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Pcreate_class_nocb(long parent_class, String name) throws HDF5LibraryException {
+    public static long H5Pcreate_class_nocb(long parent_class, String name) throws HDF5LibraryException
+    {
         long id = _H5Pcreate_class_nocb(parent_class, name);
-          if (id > 0) {
+        if (id > 0) {
             log.trace("OPEN_IDS: H5Pcreate_class_nocb add {}", id);
             OPEN_IDS.add(id);
             log.trace("OPEN_IDS: {}", OPEN_IDS.size());
@@ -7156,21 +7399,27 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Pcreate_class_nocb(long parent_class, String name) throws HDF5LibraryException;
-
-//    public static long H5Pcreate_class(long parent_class, String name, H5P_cls_create_func_cb create_op, H5P_cls_create_func_t create_data,
-//             H5P_cls_copy_func_cb copy_op, H5P_cls_copy_func_t copy_data, H5P_cls_close_func_cb close_op, H5P_cls_close_func_t close_data) throws HDF5LibraryException {
-//        long id = _H5Pcreate_class(parent_class, name, create_op, create_data, copy_op, copy_data, close_op, close_data);
-//          if (id > 0) {
-//            log.trace("OPEN_IDS: H5Pcreate_class add {}", id);
-//            OPEN_IDS.add(id);
-//            log.trace("OPEN_IDS: {}", OPEN_IDS.size());
-//        }
-//        return id;
-//    }
-//
-//    private synchronized static native long _H5Pcreate_class(long parent_class, String name, H5P_cls_create_func_cb create_op, H5P_cls_create_func_t create_data,
-//            H5P_cls_copy_func_cb copy_op, H5P_cls_copy_func_t copy_data, H5P_cls_close_func_cb close_op, H5P_cls_close_func_t close_data) throws HDF5LibraryException;
+    private synchronized static native long _H5Pcreate_class_nocb(long parent_class, String name)
+        throws HDF5LibraryException;
+
+    //    public static long H5Pcreate_class(long parent_class, String name, H5P_cls_create_func_cb create_op,
+    //    H5P_cls_create_func_t create_data,
+    //             H5P_cls_copy_func_cb copy_op, H5P_cls_copy_func_t copy_data, H5P_cls_close_func_cb
+    //             close_op, H5P_cls_close_func_t close_data) throws HDF5LibraryException {
+    //        long id = _H5Pcreate_class(parent_class, name, create_op, create_data, copy_op, copy_data,
+    //        close_op, close_data);
+    //          if (id > 0) {
+    //            log.trace("OPEN_IDS: H5Pcreate_class add {}", id);
+    //            OPEN_IDS.add(id);
+    //            log.trace("OPEN_IDS: {}", OPEN_IDS.size());
+    //        }
+    //        return id;
+    //    }
+    //
+    //    private synchronized static native long _H5Pcreate_class(long parent_class, String name,
+    //    H5P_cls_create_func_cb create_op, H5P_cls_create_func_t create_data,
+    //            H5P_cls_copy_func_cb copy_op, H5P_cls_copy_func_t copy_data, H5P_cls_close_func_cb close_op,
+    //            H5P_cls_close_func_t close_data) throws HDF5LibraryException;
 
     /**
      * H5Pregister2_nocb registers a property list with no callback functions.
@@ -7187,10 +7436,13 @@ public class H5 implements java.io.Serializable {
      * @exception HDF5LibraryException
      *                - Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Pregister2_nocb(long plist_class, String name, long size, byte[] def_value) throws HDF5LibraryException;
+    public synchronized static native void H5Pregister2_nocb(long plist_class, String name, long size,
+                                                             byte[] def_value) throws HDF5LibraryException;
 
-//    public synchronized static native void H5Pregister2(long plist_class, String name, long size, byte[] def_value, H5P_prp_create_func_cb prp_create, H5P_prp_set_func_cb prp_set,
-//          H5P_prp_get_func_cb prp_get, H5P_prp_delete_func_cb prp_delete, H5P_prp_copy_func_cb prp_copy, H5P_prp_compare_func_cb prp_cmp, H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
+    //    public synchronized static native void H5Pregister2(long plist_class, String name, long size, byte[]
+    //    def_value, H5P_prp_create_func_cb prp_create, H5P_prp_set_func_cb prp_set,
+    //          H5P_prp_get_func_cb prp_get, H5P_prp_delete_func_cb prp_delete, H5P_prp_copy_func_cb prp_copy,
+    //          H5P_prp_compare_func_cb prp_cmp, H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
 
     /**
      * H5Pinsert2_nocb inserts a property list with no callback functions.
@@ -7205,37 +7457,39 @@ public class H5 implements java.io.Serializable {
      *            IN: Default value of the property
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-     public synchronized static native void H5Pinsert2_nocb(long plist, String name, long size,  byte[] value) throws HDF5LibraryException;
+    public synchronized static native void H5Pinsert2_nocb(long plist, String name, long size, byte[] value)
+        throws HDF5LibraryException;
 
-
-    // public synchronized static native void H5Pinsert2(long plist, String name, long size,  byte[] value, H5P_prp_set_func_cb prp_set, H5P_prp_get_func_cb prp_get,
-    //      H5P_prp_delete_func_cb prp_delete, H5P_prp_copy_func_cb prp_copy, H5P_prp_compare_func_cb prp_cmp, H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
+    // public synchronized static native void H5Pinsert2(long plist, String name, long size,  byte[] value,
+    // H5P_prp_set_func_cb prp_set, H5P_prp_get_func_cb prp_get,
+    //      H5P_prp_delete_func_cb prp_delete, H5P_prp_copy_func_cb prp_copy, H5P_prp_compare_func_cb prp_cmp,
+    //      H5P_prp_close_func_cb prp_close) throws HDF5LibraryException;
 
     /**
      * H5Piterate iterates over the properties in a property list or class
      *
      * @param  plist
-     *             IN: ID of property object to iterate over
+     *            IN: ID of property object to iterate over
      * @param  idx
-     *             IN/OUT: index of the property to begin with
+     *            IN/OUT: index of the property to begin with
      * @param  op
-     *             IN: function to be called with each property iterated over.
+     *            IN: function to be called with each property iterated over.
      * @param  op_data
-     *             IN: iteration data from user
+     *            IN: iteration data from user
      *
-     * @return
-     *          the return value of the last call to op if it was non-zero,
-     *          zero if all properties have been processed
+     * @return    the return value of the last call to op if it was non-zero,
+     *            zero if all properties have been processed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      *
      **/
-    public synchronized static native int H5Piterate(long plist, int[] idx, H5P_iterate_cb op, H5P_iterate_t op_data) throws HDF5LibraryException;
+    public synchronized static native int H5Piterate(long plist, int[] idx, H5P_iterate_cb op,
+                                                     H5P_iterate_t op_data) throws HDF5LibraryException;
 
     // /////// Object creation property list (OCPL) routines ///////
 
@@ -7243,7 +7497,7 @@ public class H5 implements java.io.Serializable {
      * H5Pget_attr_phase_change retrieves attribute storage phase change thresholds.
      *
      * @param ocpl_id
-     *            IN: : Object (dataset or group) creation property list identifier
+     *            IN: Object (dataset or group) creation property list identifier
      * @param attributes
      *            The maximum and minimum no. of attributes to be stored.
      *
@@ -7255,13 +7509,13 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      *
      **/
     public synchronized static native int H5Pget_attr_phase_change(long ocpl_id, int[] attributes)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_attr_phase_change sets threshold values for attribute storage on an object. These
@@ -7277,14 +7531,16 @@ public class H5 implements java.io.Serializable {
      *            IN: Minimum number of attributes to be stored in dense storage (Default: 6)
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native void H5Pset_attr_phase_change(long ocpl_id, int max_compact, int min_dense)
-            throws HDF5LibraryException;
+    public synchronized static native void H5Pset_attr_phase_change(long ocpl_id, int max_compact,
+                                                                    int min_dense)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_attr_creation_order retrieves the settings for tracking and indexing attribute creation order on an object
+     * H5Pget_attr_creation_order retrieves the settings for tracking and indexing attribute creation order on
+     * an object.
      *
      * @param ocpl_id
      *            IN: Object (group or dataset) creation property list identifier
@@ -7292,14 +7548,15 @@ public class H5 implements java.io.Serializable {
      * @return Flags specifying whether to track and index attribute creation order
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_attr_creation_order(long ocpl_id) throws HDF5LibraryException;
+    public synchronized static native int H5Pget_attr_creation_order(long ocpl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_attr_creation_order sets flags specifying whether to track and index attribute creation order on an
-     * object.
+     * H5Pset_attr_creation_order sets flags specifying whether to track and index attribute creation order on
+     * an object.
      *
      * @param ocpl_id
      *            IN: Object creation property list identifier
@@ -7309,15 +7566,15 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_attr_creation_order(long ocpl_id, int crt_order_flags)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_obj_track_times queries the object creation property list, ocpl_id, to determine whether object times are
-     * being recorded.
+     * H5Pget_obj_track_times queries the object creation property list, ocpl_id, to determine whether object
+     * times are being recorded.
      *
      * @param ocpl_id
      *            IN: Object creation property list identifier
@@ -7325,14 +7582,15 @@ public class H5 implements java.io.Serializable {
      * @return TRUE or FALSE, specifying whether object times are being recorded
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native boolean H5Pget_obj_track_times(long ocpl_id) throws HDF5LibraryException;
+    public synchronized static native boolean H5Pget_obj_track_times(long ocpl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_obj_track_times sets a property in the object creation property list, ocpl_id, that governs the recording
-     * of times associated with an object.
+     * H5Pset_obj_track_times sets a property in the object creation property list, ocpl_id, that governs the
+     * recording of times associated with an object.
      *
      * @param ocpl_id
      *            IN: Object creation property list identifier
@@ -7341,11 +7599,11 @@ public class H5 implements java.io.Serializable {
      *            IN: TRUE or FALSE, specifying whether object times are to be tracked
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native void H5Pset_obj_track_times(long ocpl_id, boolean track_times)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pmodify_filter modifies the specified FILTER in the transient or permanent output filter pipeline
@@ -7387,16 +7645,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name or an array is null.
+     *            name or an array is null.
      *
      **/
     public synchronized static native int H5Pmodify_filter(long plist, long filter, int flags, long cd_nelmts,
-            int[] cd_values) throws HDF5LibraryException, NullPointerException;
+                                                           int[] cd_values)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_filter adds the specified filter and corresponding properties to the end of an output filter pipeline.
+     * H5Pset_filter adds the specified filter and corresponding properties to the end of an output filter
+     * pipeline.
      *
      * @param plist
      *            IN: Property list identifier.
@@ -7412,14 +7672,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_filter(long plist, int filter, int flags, long cd_nelmts,
-            int[] cd_values) throws HDF5LibraryException;
+                                                        int[] cd_values) throws HDF5LibraryException;
 
     /**
-     * H5Pget_nfilters returns the number of filters defined in the filter pipeline associated with the property list
-     * plist.
+     * H5Pget_nfilters returns the number of filters defined in the filter pipeline associated with the
+     * property list plist.
      *
      * @param plist
      *            IN: Property list identifier.
@@ -7427,18 +7687,19 @@ public class H5 implements java.io.Serializable {
      * @return the number of filters in the pipeline if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pget_nfilters(long plist) throws HDF5LibraryException;
 
     /**
-     * H5Pget_filter returns information about a filter, specified by its filter number, in a filter pipeline, specified
-     * by the property list with which it is associated.
+     * H5Pget_filter returns information about a filter, specified by its filter number, in a filter pipeline,
+     * specified by the property list with which it is associated.
      *
      * @param plist
      *            IN: Property list identifier.
      * @param filter_number
-     *            IN: Sequence number within the filter pipeline of the filter for which information is sought.
+     *            IN: Sequence number within the filter pipeline of the filter for which information is
+     *                sought.
      * @param flags
      *            OUT: Bit vector specifying certain general properties of the filter.
      * @param cd_nelmts
@@ -7455,44 +7716,49 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception ArrayIndexOutOfBoundsException
-     *                Fatal error on Copyback
+     *            Fatal error on Copyback
      * @exception ArrayStoreException
-     *                Fatal error on Copyback
+     *            Fatal error on Copyback
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name or an array is null.
+     *            name or an array is null.
      *
      **/
-    public static int H5Pget_filter(long plist, int filter_number, int[] flags, long[] cd_nelmts, int[] cd_values,
-            long namelen, String[] name, int[] filter_config) throws ArrayIndexOutOfBoundsException,
-            ArrayStoreException, HDF5LibraryException, NullPointerException {
-        return H5Pget_filter2(plist, filter_number, flags, cd_nelmts, cd_values, namelen, name, filter_config);
+    public static int H5Pget_filter(long plist, int filter_number, int[] flags, long[] cd_nelmts,
+                                    int[] cd_values, long namelen, String[] name, int[] filter_config)
+        throws ArrayIndexOutOfBoundsException, ArrayStoreException, HDF5LibraryException, NullPointerException
+    {
+        return H5Pget_filter2(plist, filter_number, flags, cd_nelmts, cd_values, namelen, name,
+                              filter_config);
     }
 
     /**
-     * H5Pget_filter2 returns information about a filter, specified by its filter number, in a filter pipeline,
-     * specified by the property list with which it is associated.
+     * H5Pget_filter2 returns information about a filter, specified by its filter number, in a filter
+     * pipeline, specified by the property list with which it is associated.
      *
-     * @see public static int H5Pget_filter(int plist, int filter_number, int[] flags, int[] cd_nelmts, int[] cd_values,
-     *      int namelen, String[] name, int[] filter_config)
+     * @see public static int H5Pget_filter(int plist, int filter_number, int[] flags, int[] cd_nelmts, int[]
+     *      cd_values, int namelen, String[] name, int[] filter_config)
      *
      **/
-    private synchronized static native int H5Pget_filter2(long plist, int filter_number, int[] flags, long[] cd_nelmts,
-            int[] cd_values, long namelen, String[] name, int[] filter_config) throws ArrayIndexOutOfBoundsException,
-            ArrayStoreException, HDF5LibraryException, NullPointerException;
+    private synchronized static native int H5Pget_filter2(long plist, int filter_number, int[] flags,
+                                                          long[] cd_nelmts, int[] cd_values, long namelen,
+                                                          String[] name, int[] filter_config)
+        throws ArrayIndexOutOfBoundsException, ArrayStoreException, HDF5LibraryException,
+               NullPointerException;
 
     /**
-     * H5Pget_filter_by_id returns information about the filter specified in filter_id, a filter identifier. plist_id
-     * must be a dataset or group creation property list and filter_id must be in the associated filter pipeline. The
-     * filter_id and flags parameters are used in the same manner as described in the discussion of H5Pset_filter. Aside
-     * from the fact that they are used for output, the parameters cd_nelmts and cd_values[] are used in the same manner
-     * as described in the discussion of H5Pset_filter. On input, the cd_nelmts parameter indicates the number of
-     * entries in the cd_values[] array allocated by the calling program; on exit it contains the number of values
-     * defined by the filter. On input, the namelen parameter indicates the number of characters allocated for the
-     * filter name by the calling program in the array name[]. On exit name[] contains the name of the filter with one
-     * character of the name in each element of the array. If the filter specified in filter_id is not set for the
-     * property list, an error will be returned and H5Pget_filter_by_id1 will fail.
+     * H5Pget_filter_by_id returns information about the filter specified in filter_id, a filter identifier.
+     * plist_id must be a dataset or group creation property list and filter_id must be in the associated
+     * filter pipeline. The filter_id and flags parameters are used in the same manner as described in the
+     * discussion of H5Pset_filter. Aside from the fact that they are used for output, the parameters
+     * cd_nelmts and cd_values[] are used in the same manner as described in the discussion of H5Pset_filter.
+     * On input, the cd_nelmts parameter indicates the number of entries in the cd_values[] array allocated by
+     * the calling program; on exit it contains the number of values defined by the filter. On input, the
+     * namelen parameter indicates the number of characters allocated for the filter name by the calling
+     * program in the array name[]. On exit name[] contains the name of the filter with one character of the
+     * name in each element of the array. If the filter specified in filter_id is not set for the property
+     * list, an error will be returned and H5Pget_filter_by_id1 will fail.
      *
      * @param plist_id
      *            IN: Property list identifier.
@@ -7514,24 +7780,26 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception ArrayIndexOutOfBoundsException
-     *                Fatal error on Copyback
+     *            Fatal error on Copyback
      * @exception ArrayStoreException
-     *                Fatal error on Copyback
+     *            Fatal error on Copyback
      * @exception NullPointerException
-     *                - name or an array is null.
+     *            name or an array is null.
      *
      **/
     public static int H5Pget_filter_by_id(long plist_id, long filter_id, int[] flags, long[] cd_nelmts,
-            int[] cd_values, long namelen, String[] name, int[] filter_config) throws ArrayIndexOutOfBoundsException,
-            ArrayStoreException, HDF5LibraryException, NullPointerException {
-        return H5Pget_filter_by_id2(plist_id, filter_id, flags, cd_nelmts, cd_values, namelen, name, filter_config);
+                                          int[] cd_values, long namelen, String[] name, int[] filter_config)
+        throws ArrayIndexOutOfBoundsException, ArrayStoreException, HDF5LibraryException, NullPointerException
+    {
+        return H5Pget_filter_by_id2(plist_id, filter_id, flags, cd_nelmts, cd_values, namelen, name,
+                                    filter_config);
     }
 
     /**
-     * H5Pget_filter_by_id2 returns information about a filter, specified by its filter id, in a filter pipeline,
-     * specified by the property list with which it is associated.
+     * H5Pget_filter_by_id2 returns information about a filter, specified by its filter id, in a filter
+     * pipeline, specified by the property list with which it is associated.
      *
      * @param plist_id
      *            IN: Property list identifier.
@@ -7553,15 +7821,15 @@ public class H5 implements java.io.Serializable {
      * @return the filter identification number if successful. Otherwise returns H5Z_FILTER_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name or an array is null.
+     *            name or an array is null.
      *
      **/
-    public synchronized static native int H5Pget_filter_by_id2(long plist_id, long filter_id, int[] flags,
-            long[] cd_nelmts, int[] cd_values, long namelen, String[] name, int[] filter_config)
-                    throws HDF5LibraryException, NullPointerException;
-
+    public synchronized static native int
+    H5Pget_filter_by_id2(long plist_id, long filter_id, int[] flags, long[] cd_nelmts, int[] cd_values,
+                         long namelen, String[] name, int[] filter_config)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pall_filters_avail query to verify that all the filters set
@@ -7575,10 +7843,10 @@ public class H5 implements java.io.Serializable {
      *            FALSE if one or more filters not currently available.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native boolean H5Pall_filters_avail(long dcpl_id) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native boolean H5Pall_filters_avail(long dcpl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Premove_filter deletes a filter from the dataset creation property list;
@@ -7592,9 +7860,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Premove_filter(long obj_id, long filter) throws HDF5LibraryException;
+    public synchronized static native int H5Premove_filter(long obj_id, long filter)
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_deflate sets the compression method for a dataset.
@@ -7607,7 +7876,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_deflate(long plist, int level) throws HDF5LibraryException;
 
@@ -7621,10 +7890,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Pset_fletcher32(long plist) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pset_fletcher32(long plist)
+        throws HDF5LibraryException, NullPointerException;
 
     // /////// File creation property list (FCPL) routines ///////
 
@@ -7639,12 +7908,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      **/
-    public synchronized static native int H5Pget_userblock(long plist, long[] size) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pget_userblock(long plist, long[] size)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_userblock sets the user block size of a file creation property list.
@@ -7657,13 +7926,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_userblock(long plist, long size) throws HDF5LibraryException;
 
     /**
-     * H5Pget_sizes retrieves the size of the offsets and lengths used in an HDF5 file. This function is only valid for
-     * file creation property lists.
+     * H5Pget_sizes retrieves the size of the offsets and lengths used in an HDF5 file. This function is only
+     * valid for file creation property lists.
      *
      * @param plist
      *            IN: Identifier of property list to query.
@@ -7677,14 +7946,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value with the sizes initialized; if successful;
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      * @exception IllegalArgumentException
-     *                - size is invalid.
+     *            size is invalid.
      **/
-    public synchronized static native int H5Pget_sizes(long plist, long[] size) throws HDF5LibraryException,
-    NullPointerException, IllegalArgumentException;
+    public synchronized static native int H5Pget_sizes(long plist, long[] size)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Pset_sizes sets the byte size of the offsets and lengths used to address objects in an HDF5 file.
@@ -7699,13 +7968,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_sizes(long plist, int sizeof_addr, int sizeof_size)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_sym_k retrieves the size of the symbol table B-tree 1/2 rank and the symbol table leaf node 1/2 size.
+     * H5Pget_sym_k retrieves the size of the symbol table B-tree 1/2 rank and the symbol table leaf node 1/2
+     * size.
      *
      * @param plist
      *            IN: Property list to query.
@@ -7720,14 +7990,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      * @exception IllegalArgumentException
-     *                - size is invalid.
+     *            size is invalid.
      **/
-    public synchronized static native int H5Pget_sym_k(long plist, int[] size) throws HDF5LibraryException,
-    NullPointerException, IllegalArgumentException;
+    public synchronized static native int H5Pget_sym_k(long plist, int[] size)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Pset_sym_k sets the size of parameters used to control the symbol table nodes.
@@ -7742,9 +8012,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Pset_sym_k(long plist, int ik, int lk) throws HDF5LibraryException;
+    public synchronized static native int H5Pset_sym_k(long plist, int ik, int lk)
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_istore_k queries the 1/2 rank of an indexed storage B-tree.
@@ -7757,15 +8028,16 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - ik array is null.
+     *            ik array is null.
      **/
-    public synchronized static native int H5Pget_istore_k(long plist, int[] ik) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pget_istore_k(long plist, int[] ik)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_istore_k sets the size of the parameter used to control the B-trees for indexing chunked datasets.
+     * H5Pset_istore_k sets the size of the parameter used to control the B-trees for indexing chunked
+     * datasets.
      *
      * @param plist
      *            IN: Identifier of property list to query.
@@ -7775,46 +8047,47 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_istore_k(long plist, int ik) throws HDF5LibraryException;
 
     /**
-     * H5Pget_shared_mesg_nindexes retrieves number of shared object header message indexes in file creation property
-     * list.
+     * H5Pget_shared_mesg_nindexes retrieves number of shared object header message indexes in file creation
+     * property list.
      *
      * @param fcpl_id
      *            IN: : File creation property list identifier
      *
-     * @return nindexes, the number of shared object header message indexes available in files created with this
-     *         property list
+     * @return nindexes, the number of shared object header message indexes available in files created with
+     *         this property list
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_shared_mesg_nindexes(long fcpl_id) throws HDF5LibraryException;
+    public synchronized static native int H5Pget_shared_mesg_nindexes(long fcpl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_shared_mesg_nindexes sets the number of shared object header message indexes in the specified file
-     * creation property list.
+     * H5Pset_shared_mesg_nindexes sets the number of shared object header message indexes in the specified
+     * file creation property list.
      *
      * @param plist_id
      *            IN: File creation property list
      * @param nindexes
-     *            IN: Number of shared object header message indexes to be available in files created with this property
-     *            list
+     *            IN: Number of shared object header message indexes to be available in files created with
+     *                this property list
      *
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid value of nindexes
+     *            Invalid value of nindexes
      *
      **/
     public synchronized static native int H5Pset_shared_mesg_nindexes(long plist_id, int nindexes)
-            throws HDF5LibraryException, IllegalArgumentException;
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_shared_mesg_index Retrieves the configuration settings for a shared message index.
@@ -7834,15 +8107,16 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - mesg_info is null.
+     *            mesg_info is null.
      * @exception IllegalArgumentException
-     *                - Invalid value of nindexes
+     *            Invalid value of nindexes
      *
      **/
-    public synchronized static native int H5Pget_shared_mesg_index(long fcpl_id, int index_num, int[] mesg_info)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    public synchronized static native int H5Pget_shared_mesg_index(long fcpl_id, int index_num,
+                                                                   int[] mesg_info)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Pset_shared_mesg_index Configures the specified shared object header message index
@@ -7859,13 +8133,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid value of nindexes
+     *            Invalid value of nindexes
      *
      **/
-    public synchronized static native int H5Pset_shared_mesg_index(long fcpl_id, int index_num, int mesg_type_flags,
-            int min_mesg_size) throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native int H5Pset_shared_mesg_index(long fcpl_id, int index_num,
+                                                                   int mesg_type_flags, int min_mesg_size)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_shared_mesg_phase_change retrieves shared object header message phase change information.
@@ -7876,20 +8151,21 @@ public class H5 implements java.io.Serializable {
      *            The threshold values for storage of shared object header message indexes in a file.
      *
      *            
    -     *      size[0] =  Threshold above which storage of a shared object header message index shifts from list to B-tree
-     *      size[1] =  Threshold below which storage of a shared object header message index reverts to list format
+     *      size[0] =  Threshold above which storage of a shared object header message index shifts from list
+     *      to B-tree size[1] =  Threshold below which storage of a shared object header message index reverts
+     *      to list format
      * 
    
      *
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      *
      **/
     public synchronized static native int H5Pget_shared_mesg_phase_change(long fcpl_id, int[] size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_shared_mesg_phase_change sets shared object header message storage phase change thresholds.
@@ -7897,24 +8173,28 @@ public class H5 implements java.io.Serializable {
      * @param fcpl_id
      *            IN: File creation property list identifier
      * @param max_list
-     *            IN: Threshold above which storage of a shared object header message index shifts from list to B-tree
+     *            IN: Threshold above which storage of a shared object header message index shifts from list
+     *                to B-tree
      * @param min_btree
-     *            IN: Threshold below which storage of a shared object header message index reverts to list format
+     *            IN: Threshold below which storage of a shared object header message index reverts to list
+     *                format
      *
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values of max_list and min_btree.
+     *            Invalid values of max_list and min_btree.
      *
      **/
-    public synchronized static native int H5Pset_shared_mesg_phase_change(long fcpl_id, int max_list, int min_btree)
-            throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native int H5Pset_shared_mesg_phase_change(long fcpl_id, int max_list,
+                                                                          int min_btree)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pset_file_space_strategy sets the file space management strategy for the file associated with fcpl_id to strategy.
-     * There are four strategies that applications can select and they are described in the Parameters section.
+     * H5Pset_file_space_strategy sets the file space management strategy for the file associated with fcpl_id
+     * to strategy. There are four strategies that applications can select and they are described in the
+     * Parameters section.
      *
      * @param fcpl_id
      *            IN: File creation property list identifier
@@ -7924,7 +8204,8 @@ public class H5 implements java.io.Serializable {
      *                        Mechanisms: free-space managers, aggregators, and virtual file drivers
      *                        This is the library default when not set.
      *                H5F_FSPACE_STRATEGY_PAGE
-     *                        Mechanisms: free-space managers with embedded paged aggregation and virtual file drivers
+     *                        Mechanisms: free-space managers with embedded paged aggregation and virtual file
+     *                                    drivers
      *                H5F_FSPACE_STRATEGY_AGGR
      *                        Mechanisms: aggregators and virtual file drivers
      *                H5F_FSPACE_STRATEGY_NONE
@@ -7932,20 +8213,23 @@ public class H5 implements java.io.Serializable {
      * @param persist
      *            IN: True to persist free-space.
      * @param threshold
-     *            IN: The free-space section threshold. The library default is 1, which is to track all free-space sections.
-     *                Passing a value of zero (0) indicates that the value of threshold is not to be modified.
+     *            IN: The free-space section threshold. The library default is 1, which is to track all
+     *                free-space sections. Passing a value of zero (0) indicates that the value of threshold
+     *                is not to be modified.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values of max_list and min_btree.
+     *            Invalid values of max_list and min_btree.
      *
      **/
-    public synchronized static native void H5Pset_file_space_strategy(long fcpl_id, int strategy, boolean persist, long threshold)
-            throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native void H5Pset_file_space_strategy(long fcpl_id, int strategy,
+                                                                      boolean persist, long threshold)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_file_space_strategy provides the means for applications to manage the HDF5 file's file space strategy for their specific needs.
+     * H5Pget_file_space_strategy provides the means for applications to manage the HDF5 file's file space
+     * strategy for their specific needs.
      *
      * @param fcpl_id
      *            IN: File creation property list identifier
@@ -7957,16 +8241,18 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space strategy.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values of max_list and min_btree.
+     *            Invalid values of max_list and min_btree.
      *
      **/
-    public synchronized static native int H5Pget_file_space_strategy(long fcpl_id, boolean[] persist, long[] threshold)
-            throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native int H5Pget_file_space_strategy(long fcpl_id, boolean[] persist,
+                                                                     long[] threshold)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_file_space_strategy_persist provides the means for applications to manage the HDF5 file's file space strategy for their specific needs.
+     * H5Pget_file_space_strategy_persist provides the means for applications to manage the HDF5 file's file
+     * space strategy for their specific needs.
      *
      * @param fcpl_id
      *            IN: File creation property list identifier
@@ -7974,16 +8260,17 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space persistence.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values of max_list and min_btree.
+     *            Invalid values of max_list and min_btree.
      *
      **/
     public synchronized static native boolean H5Pget_file_space_strategy_persist(long fcpl_id)
-            throws HDF5LibraryException, IllegalArgumentException;
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_file_space_strategy_threshold provides the means for applications to manage the HDF5 file's file space strategy for their specific needs.
+     * H5Pget_file_space_strategy_threshold provides the means for applications to manage the HDF5 file's file
+     * space strategy for their specific needs.
      *
      * @param fcpl_id
      *            IN: File creation property list identifier
@@ -7991,54 +8278,55 @@ public class H5 implements java.io.Serializable {
      * @return the current free-space section threshold.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values of max_list and min_btree.
-     *
-     **/
-   public synchronized static native long H5Pget_file_space_strategy_threshold(long fcpl_id)
-            throws HDF5LibraryException, IllegalArgumentException;
-
-   /**
-    * H5Pset_file_space_page_size retrieves the file space page size for aggregating small metadata or raw data.
-    *
-    * @param fcpl_id
-    *            IN: File creation property list identifier
-    * @param page_size
-    *            IN: the file space page size.
-    *
-    *
-    * @exception HDF5LibraryException
-    *                - Error from the HDF-5 Library.
-    * @exception IllegalArgumentException
-    *                - Invalid values of max_list and min_btree.
-    *
-    **/
-  public synchronized static native void H5Pset_file_space_page_size(long fcpl_id, long page_size)
-           throws HDF5LibraryException, IllegalArgumentException;
-
-   /**
-    * H5Pget_file_space_page_size Sets the file space page size for paged aggregation.
-    *
-    * @param fcpl_id
-    *            IN: File creation property list identifier
-    *
-    * @return the current file space page size.
-    *
-    * @exception HDF5LibraryException
-    *                - Error from the HDF-5 Library.
-    * @exception IllegalArgumentException
-    *                - Invalid values of max_list and min_btree.
-    *
-    **/
-  public synchronized static native long H5Pget_file_space_page_size(long fcpl_id)
-           throws HDF5LibraryException, IllegalArgumentException;
+     *            Invalid values of max_list and min_btree.
+     *
+     **/
+    public synchronized static native long H5Pget_file_space_strategy_threshold(long fcpl_id)
+        throws HDF5LibraryException, IllegalArgumentException;
 
+    /**
+     * H5Pset_file_space_page_size retrieves the file space page size for aggregating small metadata or raw
+     * data.
+     *
+     * @param fcpl_id
+     *            IN: File creation property list identifier
+     * @param page_size
+     *            IN: the file space page size.
+     *
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
+     * @exception IllegalArgumentException
+     *            Invalid values of max_list and min_btree.
+     *
+     **/
+    public synchronized static native void H5Pset_file_space_page_size(long fcpl_id, long page_size)
+        throws HDF5LibraryException, IllegalArgumentException;
+
+    /**
+     * H5Pget_file_space_page_size Sets the file space page size for paged aggregation.
+     *
+     * @param fcpl_id
+     *            IN: File creation property list identifier
+     *
+     * @return the current file space page size.
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
+     * @exception IllegalArgumentException
+     *            Invalid values of max_list and min_btree.
+     *
+     **/
+    public synchronized static native long H5Pget_file_space_page_size(long fcpl_id)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     // /////// File access property list (FAPL) routines ///////
 
     /**
-     * H5Pget_alignment retrieves the current settings for alignment properties from a file access property list.
+     * H5Pget_alignment retrieves the current settings for alignment properties from a file access property
+     * list.
      *
      * @param plist
      *            IN: Identifier of a file access property list.
@@ -8052,18 +8340,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - alignment array is null.
+     *            alignment array is null.
      * @exception IllegalArgumentException
-     *                - alignment array is invalid.
+     *            alignment array is invalid.
      **/
-    public synchronized static native int H5Pget_alignment(long plist, long[] alignment) throws HDF5LibraryException,
-    NullPointerException, IllegalArgumentException;
+    public synchronized static native int H5Pget_alignment(long plist, long[] alignment)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
-     * H5Pset_alignment sets the alignment properties of a file access property list so that any file object >=
-     * THRESHOLD bytes will be aligned on an address which is a multiple of ALIGNMENT.
+     * H5Pset_alignment sets the alignment properties of a file access property list so that any file object
+     * >= THRESHOLD bytes will be aligned on an address which is a multiple of ALIGNMENT.
      *
      * @param plist
      *            IN: Identifier for a file access property list.
@@ -8075,21 +8363,21 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_alignment(long plist, long threshold, long alignment)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_driver returns the identifier of the low-level file driver associated with the file access property list
-     * or data transfer property list plid.
+     * H5Pget_driver returns the identifier of the low-level file driver associated with the file access
+     * property list or data transfer property list plid.
      *
      * @param plid
      *            IN: File access or data transfer property list identifier.
      * @return a valid low-level driver identifier if successful; a negative value if failed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      */
     public synchronized static native long H5Pget_driver(long plid) throws HDF5LibraryException;
 
@@ -8102,7 +8390,7 @@ public class H5 implements java.io.Serializable {
      * @return the offset.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native long H5Pget_family_offset(long fapl_id) throws HDF5LibraryException;
@@ -8118,14 +8406,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_family_offset(long fapl_id, long offset) throws HDF5LibraryException;
+    public synchronized static native int H5Pset_family_offset(long fapl_id, long offset)
+        throws HDF5LibraryException;
 
     /**
-     * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible number of bytes
-     * and the RDCC_W0 value in the raw data chunk cache.
+     * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible
+     * number of bytes and the RDCC_W0 value in the raw data chunk cache.
      *
      * @param plist
      *            IN: Identifier of the file access property list.
@@ -8141,16 +8430,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an array is null.
+     *            an array is null.
      **/
     public synchronized static native int H5Pget_cache(long plist, int[] mdc_nelmts, long[] rdcc_nelmts,
-            long[] rdcc_nbytes, double[] rdcc_w0) throws HDF5LibraryException, NullPointerException;
+                                                       long[] rdcc_nbytes, double[] rdcc_w0)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_cache sets the number of elements (objects) in the meta data cache and the total number of bytes in the
-     * raw data chunk cache.
+     * H5Pset_cache sets the number of elements (objects) in the meta data cache and the total number of bytes
+     * in the raw data chunk cache.
      *
      * @param plist
      *            IN: Identifier of the file access property list.
@@ -8166,14 +8456,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Pset_cache(long plist, int mdc_nelmts, long rdcc_nelmts, long rdcc_nbytes,
-            double rdcc_w0) throws HDF5LibraryException;
+    public synchronized static native int H5Pset_cache(long plist, int mdc_nelmts, long rdcc_nelmts,
+                                                       long rdcc_nbytes, double rdcc_w0)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_mdc_config gets the initial metadata cache configuration contained in a file access property list.
-     *                   This configuration is used when the file is opened.
+     * H5Pget_mdc_config gets the initial metadata cache configuration contained in a file access property
+     * list. This configuration is used when the file is opened.
      *
      * @param plist_id
      *            IN: Identifier of the file access property list.
@@ -8181,14 +8472,15 @@ public class H5 implements java.io.Serializable {
      * @return A buffer(H5AC_cache_config_t) for the current metadata cache configuration information
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native H5AC_cache_config_t H5Pget_mdc_config(long plist_id) throws HDF5LibraryException;
+    public synchronized static native H5AC_cache_config_t H5Pget_mdc_config(long plist_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_mdc_config sets the initial metadata cache configuration contained in a file access property list and
-     * loads it into the instance of H5AC_cache_config_t pointed to by the config_ptr parameter. This configuration is
-     * used when the file is opened.
+     * H5Pset_mdc_config sets the initial metadata cache configuration contained in a file access property
+     * list and loads it into the instance of H5AC_cache_config_t pointed to by the config_ptr parameter. This
+     * configuration is used when the file is opened.
      *
      * @param plist_id
      *            IN: Identifier of the file access property list.
@@ -8196,14 +8488,14 @@ public class H5 implements java.io.Serializable {
      *            IN: H5AC_cache_config_t, the initial metadata cache configuration.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Pset_mdc_config(long plist_id, H5AC_cache_config_t config_ptr)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_gc_references Returns the current setting for the garbage collection references property from a file access
-     * property list.
+     * H5Pget_gc_references Returns the current setting for the garbage collection references property from a
+     * file access property list.
      *
      * @param fapl_id
      *            IN File access property list
@@ -8211,13 +8503,13 @@ public class H5 implements java.io.Serializable {
      * @return GC is on (true) or off (false)
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Pget_gc_references(long fapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Pset_gc_references Sets the flag for garbage collecting references for the file. Default value for garbage
-     * collecting references is off.
+     * H5Pset_gc_references Sets the flag for garbage collecting references for the file. Default value for
+     * garbage collecting references is off.
      *
      * @param fapl_id
      *            IN File access property list
@@ -8227,10 +8519,10 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_gc_references(long fapl_id, boolean gc_ref)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_fclose_degree returns the degree for the file close behavior for a file access
@@ -8242,10 +8534,10 @@ public class H5 implements java.io.Serializable {
      * @return the degree for the file close behavior
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Pget_fclose_degree(long fapl_id) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pget_fclose_degree(long fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fclose_degree sets the degree for the file close behavior.
@@ -8258,10 +8550,10 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Pset_fclose_degree(long fapl_id, int degree) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pset_fclose_degree(long fapl_id, int degree)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_meta_block_size the current metadata block size setting.
@@ -8272,7 +8564,7 @@ public class H5 implements java.io.Serializable {
      * @return the minimum size, in bytes, of metadata block allocations.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native long H5Pget_meta_block_size(long fapl_id) throws HDF5LibraryException;
@@ -8286,14 +8578,15 @@ public class H5 implements java.io.Serializable {
      *            IN: Minimum size, in bytes, of metadata block allocations.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native void H5Pset_meta_block_size(long fapl_id, long size) throws HDF5LibraryException;
+    public synchronized static native void H5Pset_meta_block_size(long fapl_id, long size)
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_sieve_buf_size retrieves the current settings for the data sieve buffer size
-     *      property from a file access property list.
+     * property from a file access property list.
      *
      * @param fapl_id
      *            IN: Identifier for property list to query.
@@ -8301,7 +8594,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Pget_sieve_buf_size(long fapl_id) throws HDF5LibraryException;
 
@@ -8323,12 +8616,14 @@ public class H5 implements java.io.Serializable {
      *            IN: maximum size of the data seive buffer.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Pset_sieve_buf_size(long fapl_id, long size) throws HDF5LibraryException;
+    public synchronized static native void H5Pset_sieve_buf_size(long fapl_id, long size)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_small_data_block_size retrieves the size of a block of small data in a file creation property list.
+     * H5Pget_small_data_block_size retrieves the size of a block of small data in a file creation property
+     * list.
      *
      * @param plist
      *            IN: Identifier for property list to query.
@@ -8336,13 +8631,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value and the size of the user block; if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Pget_small_data_block_size(long plist) throws HDF5LibraryException;
+    public synchronized static native long H5Pget_small_data_block_size(long plist)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_small_data_block_size reserves blocks of size bytes for the contiguous storage of the raw data portion of
-     * small datasets.
+     * H5Pset_small_data_block_size reserves blocks of size bytes for the contiguous storage of the raw data
+     * portion of small datasets.
      *
      * @param plist
      *            IN: Identifier of property list to modify.
@@ -8352,14 +8648,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_small_data_block_size(long plist, long size)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_libver_bounds retrieves the lower and upper bounds on the HDF5 Library versions that indirectly determine
-     * the object formats versions used when creating objects in the file.
+     * H5Pget_libver_bounds retrieves the lower and upper bounds on the HDF5 Library versions that indirectly
+     * determine the object formats versions used when creating objects in the file.
      *
      * @param fapl_id
      *            IN: File access property list identifier
@@ -8374,17 +8670,17 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      *
      **/
-    public synchronized static native int H5Pget_libver_bounds(long fapl_id, int[] libver) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pget_libver_bounds(long fapl_id, int[] libver)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_libver_bounds Sets bounds on library versions, and indirectly format versions, to be used when creating
-     * objects
+     * H5Pset_libver_bounds Sets bounds on library versions, and indirectly format versions, to be used when
+     * creating objects
      *
      * @param fapl_id
      *            IN: File access property list identifier
@@ -8397,13 +8693,13 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Argument is Illegal
+     *            Argument is Illegal
      *
      **/
     public synchronized static native int H5Pset_libver_bounds(long fapl_id, int low, int high)
-            throws HDF5LibraryException, IllegalArgumentException;
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_elink_file_cache_size retrieves the size of the external link open file cache.
@@ -8414,13 +8710,15 @@ public class H5 implements java.io.Serializable {
      * @return External link open file cache size in number of files.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_elink_file_cache_size(long fapl_id) throws HDF5LibraryException;
+    public synchronized static native int H5Pget_elink_file_cache_size(long fapl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_elink_file_cache_size sets the number of files that can be held open in an external link open file cache.
+     * H5Pset_elink_file_cache_size sets the number of files that can be held open in an external link open
+     * file cache.
      *
      * @param fapl_id
      *            IN: File access property list identifier
@@ -8428,11 +8726,11 @@ public class H5 implements java.io.Serializable {
      *            IN: External link open file cache size in number of files.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native void H5Pset_elink_file_cache_size(long fapl_id, int efc_size)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_mdc_log_options sets metadata cache logging options.
@@ -8447,13 +8745,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether the logging begins as soon as the file is opened or created.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - location is null.
+     *            location is null.
      *
      **/
-    public synchronized static native void H5Pset_mdc_log_options(long fapl_id, boolean is_enabled, String location, boolean start_on_access)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Pset_mdc_log_options(long fapl_id, boolean is_enabled,
+                                                                  String location, boolean start_on_access)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_mdc_log_options gets metadata cache logging options.
@@ -8463,19 +8762,21 @@ public class H5 implements java.io.Serializable {
      * @param mdc_log_options
      *         the options
      *             mdc_logging_options[0] = is_enabled, whether logging is enabled
-     *             mdc_logging_options[1] = start_on_access, whether the logging begins as soon as the file is opened or created
+     *             mdc_logging_options[1] = start_on_access, whether the logging begins as soon as the file is
+     *                                      opened or created
      *
      * @return the location of log in UTF-8/ASCII (file path/name) (On Windows, this must be ASCII).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native String H5Pget_mdc_log_options(long fapl_id, boolean[] mdc_log_options)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_metadata_read_attempts retrieves the number of read attempts that is set in the file access property list plist_id.
+     * H5Pget_metadata_read_attempts retrieves the number of read attempts that is set in the file access
+     * property list plist_id.
      *
      * @param plist_id
      *            IN: File access property list identifier
@@ -8483,18 +8784,20 @@ public class H5 implements java.io.Serializable {
      * @return The number of read attempts.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native long H5Pget_metadata_read_attempts(long plist_id) throws HDF5LibraryException;
+    public synchronized static native long H5Pget_metadata_read_attempts(long plist_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_metadata_read_attempts sets the number of reads that the library will try when reading checksummed
-     * metadata in an HDF5 file opened with SWMR access. When reading such metadata, the library will compare the
-     * checksum computed for the metadata just read with the checksum stored within the piece of checksum. When
-     * performing SWMR operations on a file, the checksum check might fail when the library reads data on a system
-     * that is not atomic. To remedy such situations, the library will repeatedly read the piece of metadata until
-     * the check passes or finally fails the read when the allowed number of attempts is reached.
+     * H5Pset_metadata_read_attempts sets the number of reads that the library will try when reading
+     * checksummed metadata in an HDF5 file opened with SWMR access. When reading such metadata, the library
+     * will compare the checksum computed for the metadata just read with the checksum stored within the piece
+     * of checksum. When performing SWMR operations on a file, the checksum check might fail when the library
+     * reads data on a system that is not atomic. To remedy such situations, the library will repeatedly read
+     * the piece of metadata until the check passes or finally fails the read when the allowed number of
+     * attempts is reached.
      *
      * @param plist_id
      *            IN: File access property list identifier
@@ -8502,15 +8805,15 @@ public class H5 implements java.io.Serializable {
      *            IN: The number of read attempts which is a value greater than 0.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native void H5Pset_metadata_read_attempts(long plist_id, long attempts)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_evict_on_close retrieves the file access property list setting that determines whether an HDF5 object
-     * will be evicted from the library's metadata cache when it is closed.
+     * H5Pget_evict_on_close retrieves the file access property list setting that determines whether an HDF5
+     * object will be evicted from the library's metadata cache when it is closed.
      *
      * @param fapl_id
      *            IN: File access property list identifier
@@ -8518,14 +8821,14 @@ public class H5 implements java.io.Serializable {
      * @return indication if the object will be evicted on close.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native boolean H5Pget_evict_on_close(long fapl_id)
-            throws HDF5LibraryException;
+    public synchronized static native boolean H5Pget_evict_on_close(long fapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Pset_evict_on_close controls the library's behavior of evicting metadata associated with a closed object.
+     * H5Pset_evict_on_close controls the library's behavior of evicting metadata associated with a closed
+     * object.
      *
      * @param fapl_id
      *            IN: File access property list identifier
@@ -8533,11 +8836,11 @@ public class H5 implements java.io.Serializable {
      *            IN: Whether the HDF5 object should be evicted on close.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native void H5Pset_evict_on_close(long fapl_id, boolean evict_on_close)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_use_file_locking retrieves whether we are using file locking.
@@ -8548,11 +8851,11 @@ public class H5 implements java.io.Serializable {
      * @return indication if file locking is used.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_use_file_locking(long fapl_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_use_file_locking retrieves whether we ignore file locks when they are disabled.
@@ -8563,11 +8866,11 @@ public class H5 implements java.io.Serializable {
      * @return indication if file locking is ignored.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_ignore_disabled_file_locking(long fapl_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_file_locking sets parameters related to file locking.
@@ -8576,17 +8879,19 @@ public class H5 implements java.io.Serializable {
      *            IN: File access property list identifier
      *
      * @param use_file_locking
-     *            IN: Whether the library will use file locking when opening files (mainly for SWMR semantics).
+     *            IN: Whether the library will use file locking when opening files (mainly for SWMR
+     *semantics).
      *
      * @param ignore_when_disabled
      *            IN: Whether file locking will be ignored when disabled on a file system (useful for Lustre).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native void H5Pset_file_locking(long fapl_id, boolean use_file_locking, boolean ignore_when_disabled)
-            throws HDF5LibraryException;
+    public synchronized static native void H5Pset_file_locking(long fapl_id, boolean use_file_locking,
+                                                               boolean ignore_when_disabled)
+        throws HDF5LibraryException;
 
     //  /////  unimplemented /////
     // herr_t H5Pset_vol(hid_t plist_id, hid_t new_vol_id, const void *new_vol_info);
@@ -8601,11 +8906,11 @@ public class H5 implements java.io.Serializable {
      * @param plist
      *            IN: Identifier for property list to query.
      *
-     * @return the layout type of a dataset creation property list if successful. Otherwise returns H5D_LAYOUT_ERROR
-     *         (-1).
+     * @return the layout type of a dataset creation property list if successful. Otherwise returns
+     *         H5D_LAYOUT_ERROR (-1).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pget_layout(long plist) throws HDF5LibraryException;
 
@@ -8620,7 +8925,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_layout(long plist, int layout) throws HDF5LibraryException;
 
@@ -8637,14 +8942,14 @@ public class H5 implements java.io.Serializable {
      * @return chunk dimensionality successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims array is null.
+     *            dims array is null.
      * @exception IllegalArgumentException
-     *                - max_ndims <=0
+     *            max_ndims <=0
      **/
     public synchronized static native int H5Pget_chunk(long plist, int max_ndims, long[] dims)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Pset_chunk sets the size of the chunks used to store a chunked layout dataset.
@@ -8659,14 +8964,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims array is null.
+     *            dims array is null.
      * @exception IllegalArgumentException
-     *                - dims <=0
+     *            dims <=0
      **/
-    public synchronized static native int H5Pset_chunk(long plist, int ndims, byte[] dim) throws HDF5LibraryException,
-    NullPointerException, IllegalArgumentException;
+    public synchronized static native int H5Pset_chunk(long plist, int ndims, byte[] dim)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Pset_chunk sets the size of the chunks used to store a chunked layout dataset.
@@ -8681,24 +8986,25 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims array is null.
+     *            dims array is null.
      * @exception IllegalArgumentException
-     *                - dims <=0
+     *            dims <=0
      **/
-    public synchronized static int H5Pset_chunk(long plist, int ndims, long[] dim) throws HDF5Exception,
-    NullPointerException, IllegalArgumentException {
+    public synchronized static int H5Pset_chunk(long plist, int ndims, long[] dim)
+        throws HDF5Exception, NullPointerException, IllegalArgumentException
+    {
         if (dim == null) {
             return -1;
         }
 
         HDFArray theArray = new HDFArray(dim);
-        byte[] thedims = theArray.byteify();
+        byte[] thedims    = theArray.byteify();
 
         int retVal = H5Pset_chunk(plist, ndims, thedims);
 
-        thedims = null;
+        thedims  = null;
         theArray = null;
         return retVal;
     }
@@ -8711,28 +9017,35 @@ public class H5 implements java.io.Serializable {
      * and the name of the dataset, src_dset_name.
      *
      * @param dcpl_id
-     *            IN: The identifier of the dataset creation property list that will be used when creating the virtual dataset.
+     *            IN: The identifier of the dataset creation property list that will be used when creating the
+     *                virtual dataset.
      * @param vspace_id
-     *            IN: The dataspace identifier with the selection within the virtual dataset applied, possibly an unlimited selection.
+     *            IN: The dataspace identifier with the selection within the virtual dataset applied, possibly
+     *                an unlimited selection.
      * @param src_file_name
-     *            IN: The name of the HDF5 file where the source dataset is located. The file might not exist yet. The name can be specified using a C-style printf statement.
+     *            IN: The name of the HDF5 file where the source dataset is located. The file might not exist
+     *                yet. The name can be specified using a C-style printf statement.
      * @param src_dset_name
-     *            IN: The path to the HDF5 dataset in the file specified by src_file_name. The dataset might not exist yet. The dataset name can be specified using a C-style printf statement.
+     *            IN: The path to the HDF5 dataset in the file specified by src_file_name. The dataset might
+     *                not exist yet. The dataset name can be specified using a C-style printf statement.
      * @param src_space_id
-     *            IN: The source dataset dataspace identifier with a selection applied, possibly an unlimited selection.
+     *            IN: The source dataset dataspace identifier with a selection applied, possibly an unlimited
+     *                selection.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an name string is null.
+     *            an name string is null.
      * @exception IllegalArgumentException
-     *                - An id is <=0
+     *            an id is <=0
      **/
-    public synchronized static native void H5Pset_virtual(long dcpl_id, long vspace_id, String src_file_name, String src_dset_name, long src_space_id) throws HDF5LibraryException,
-    NullPointerException, IllegalArgumentException;
+    public synchronized static native void H5Pset_virtual(long dcpl_id, long vspace_id, String src_file_name,
+                                                          String src_dset_name, long src_space_id)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
-     * H5Pget_virtual_count gets the number of mappings for a virtual dataset that has the creation property list specified by dcpl_id.
+     * H5Pget_virtual_count gets the number of mappings for a virtual dataset that has the creation property
+     * list specified by dcpl_id.
      *
      * @param dcpl_id
      *            IN: The identifier of the virtual dataset creation property list.
@@ -8740,15 +9053,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative number of mappings if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - An id is <=0
+     *            An id is <=0
      **/
-    public synchronized static native long H5Pget_virtual_count(long dcpl_id) throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native long H5Pget_virtual_count(long dcpl_id)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_virtual_vspace takes the dataset creation property list for the virtual dataset, dcpl_id, and the mapping index, index,
-     *     and returns a dataspace identifier for the selection within the virtual dataset used in the mapping.
+     * H5Pget_virtual_vspace takes the dataset creation property list for the virtual dataset, dcpl_id, and
+     * the mapping index, index, and returns a dataspace identifier for the selection within the virtual
+     * dataset used in the mapping.
      *
      * @param dcpl_id
      *            IN: The identifier of the virtual dataset creation property list.
@@ -8758,15 +9073,17 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - An id is <=0
+     *            An id is <=0
      **/
-    public synchronized static native long H5Pget_virtual_vspace(long dcpl_id, long index) throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native long H5Pget_virtual_vspace(long dcpl_id, long index)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_virtual_srcspace takes the dataset creation property list for the virtual dataset, dcpl_id, and the mapping index, index,
-     *    and returns a dataspace identifier for the selection within the source dataset used in the mapping.
+     * H5Pget_virtual_srcspace takes the dataset creation property list for the virtual dataset, dcpl_id, and
+     * the mapping index, index, and returns a dataspace identifier for the selection within the source
+     * dataset used in the mapping.
      *
      * @param dcpl_id
      *            IN: The identifier of the virtual dataset creation property list.
@@ -8776,15 +9093,17 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - An id is <=0
+     *            An id is <=0
      **/
-    public synchronized static native long H5Pget_virtual_srcspace(long dcpl_id, long index) throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native long H5Pget_virtual_srcspace(long dcpl_id, long index)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_virtual_filename takes the dataset creation property list for the virtual dataset, dcpl_id, the mapping index, index,
-     * the size of the filename for a source dataset, size, and retrieves the name of the file for a source dataset used in the mapping.
+     * H5Pget_virtual_filename takes the dataset creation property list for the virtual dataset, dcpl_id, the
+     * mapping index, index, the size of the filename for a source dataset, size, and retrieves the name of
+     * the file for a source dataset used in the mapping.
      *
      * @param dcpl_id
      *            IN: The identifier of the virtual dataset creation property list.
@@ -8794,15 +9113,17 @@ public class H5 implements java.io.Serializable {
      * @return the name of the file containing the source dataset if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - An id is <=0
+     *            An id is <=0
      **/
-    public synchronized static native String H5Pget_virtual_filename(long dcpl_id, long index) throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native String H5Pget_virtual_filename(long dcpl_id, long index)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_virtual_dsetname takes the dataset creation property list for the virtual dataset, dcpl_id, the mapping index, index, the
-     * size of the dataset name for a source dataset, size, and retrieves the name of the source dataset used in the mapping.
+     * H5Pget_virtual_dsetname takes the dataset creation property list for the virtual dataset, dcpl_id, the
+     * mapping index, index, the size of the dataset name for a source dataset, size, and retrieves the name
+     * of the source dataset used in the mapping.
      *
      * @param dcpl_id
      *            IN: The identifier of the virtual dataset creation property list.
@@ -8812,41 +9133,44 @@ public class H5 implements java.io.Serializable {
      * @return the name of the source dataset if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - An id is <=0
-     **/
-    public synchronized static native String H5Pget_virtual_dsetname(long dcpl_id, long index) throws HDF5LibraryException, IllegalArgumentException;
-
-//    /////  unimplemented /////
-//    /**
-//     * H5Pget_vds_file_cache_size retrieves the size of the vds link open file cache.
-//     *
-//     * @param fapl_id
-//     *            IN: File access property list identifier
-//     *
-//     * @return VDS link open file cache size in number of files.
-//     *
-//     * @exception HDF5LibraryException
-//     *                - Error from the HDF-5 Library.
-//     *
-//     **/
-//    public synchronized static native int H5Pget_vds_file_cache_size(long fapl_id) throws HDF5LibraryException;
-//
-//    /**
-//     * H5Pset_vds_file_cache_size sets the number of files that can be held open in an vds link open file cache.
-//     *
-//     * @param fapl_id
-//     *            IN: File access property list identifier
-//     * @param efc_size
-//     *            IN: VDS link open file cache size in number of files.
-//     *
-//     * @exception HDF5LibraryException
-//     *                - Error from the HDF-5 Library.
-//     *
-//     **/
-//    public synchronized static native void H5Pset_vds_file_cache_size(long fapl_id, int efc_size)
-//            throws HDF5LibraryException;
+     *            An id is <=0
+     **/
+    public synchronized static native String H5Pget_virtual_dsetname(long dcpl_id, long index)
+        throws HDF5LibraryException, IllegalArgumentException;
+
+    //    /////  unimplemented /////
+    //    /**
+    //     * H5Pget_vds_file_cache_size retrieves the size of the vds link open file cache.
+    //     *
+    //     * @param fapl_id
+    //     *            IN: File access property list identifier
+    //     *
+    //     * @return VDS link open file cache size in number of files.
+    //     *
+    //     * @exception HDF5LibraryException
+    //     *            Error from the HDF-5 Library.
+    //     *
+    //     **/
+    //    public synchronized static native int H5Pget_vds_file_cache_size(long fapl_id) throws
+    //    HDF5LibraryException;
+    //
+    //    /**
+    //     * H5Pset_vds_file_cache_size sets the number of files that can be held open in an vds link open
+    //     * file cache.
+    //     *
+    //     * @param fapl_id
+    //     *            IN: File access property list identifier
+    //     * @param efc_size
+    //     *            IN: VDS link open file cache size in number of files.
+    //     *
+    //     * @exception HDF5LibraryException
+    //     *            Error from the HDF-5 Library.
+    //     *
+    //     **/
+    //    public synchronized static native void H5Pset_vds_file_cache_size(long fapl_id, int efc_size)
+    //            throws HDF5LibraryException;
 
     /**
      * H5Pget_external returns information about an external file.
@@ -8871,20 +9195,21 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception ArrayIndexOutOfBoundsException
-     *                Fatal error on Copyback
+     *            Fatal error on Copyback
      * @exception ArrayStoreException
-     *                Fatal error on Copyback
+     *            Fatal error on Copyback
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name or size is null.
+     *            name or size is null.
      * @exception IllegalArgumentException
-     *                - name_size <= 0 .
+     *            name_size <= 0 .
      *
      **/
     public synchronized static native int H5Pget_external(long plist, int idx, long name_size, String[] name,
-            long[] size) throws ArrayIndexOutOfBoundsException, ArrayStoreException, HDF5LibraryException,
-            NullPointerException, IllegalArgumentException;
+                                                          long[] size)
+        throws ArrayIndexOutOfBoundsException, ArrayStoreException, HDF5LibraryException,
+               NullPointerException, IllegalArgumentException;
 
     /**
      * H5Pset_external adds an external file to the list of external files.
@@ -8894,20 +9219,20 @@ public class H5 implements java.io.Serializable {
      * @param name
      *            IN: Name of an external file.
      * @param offset
-     *            IN: Offset, in bytes, from the beginning of the file to the location in the file where the data
-     *            starts.
+     *            IN: Offset, in bytes, from the beginning of the file to the location in the file where the
+     *                data starts.
      * @param size
      *            IN: Number of bytes reserved in the file for the data.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Pset_external(long plist, String name, long offset, long size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_external_count returns the number of external files for the specified dataset.
@@ -8918,7 +9243,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of external files if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pget_external_count(long plist) throws HDF5LibraryException;
 
@@ -8935,11 +9260,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_szip(long plist, int options_mask, int pixels_per_block)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_shuffle Sets up the use of the shuffle filter.
@@ -8950,11 +9275,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_shuffle(long plist_id) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pset_shuffle(long plist_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_nbit Sets up the use of the N-Bit filter.
@@ -8965,7 +9290,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_nbit(long plist_id) throws HDF5LibraryException;
@@ -8983,13 +9308,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid arguments
+     *            Invalid arguments
      *
      **/
     public synchronized static native int H5Pset_scaleoffset(long plist_id, int scale_type, int scale_factor)
-            throws HDF5LibraryException, IllegalArgumentException;
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_fill_value queries the fill value property of a dataset creation property list.
@@ -9004,10 +9329,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error converting data array.
+     *            Error converting data array.
      **/
     public synchronized static native int H5Pget_fill_value(long plist_id, long type_id, byte[] value)
-            throws HDF5Exception;
+        throws HDF5Exception;
 
     /**
      * H5Pget_fill_value queries the fill value property of a dataset creation property list.
@@ -9022,11 +9347,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error converting data array.
+     *            Error converting data array.
      **/
-    public synchronized static int H5Pget_fill_value(long plist_id, long type_id, Object obj) throws HDF5Exception {
+    public synchronized static int H5Pget_fill_value(long plist_id, long type_id, Object obj)
+        throws HDF5Exception
+    {
         HDFArray theArray = new HDFArray(obj);
-        byte[] buf = theArray.emptyBytes();
+        byte[] buf        = theArray.emptyBytes();
 
         int status = H5Pget_fill_value(plist_id, type_id, buf);
         if (status >= 0) {
@@ -9049,10 +9376,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error converting data array
+     *            Error converting data array
      **/
     public synchronized static native int H5Pset_fill_value(long plist_id, long type_id, byte[] value)
-            throws HDF5Exception;
+        throws HDF5Exception;
 
     /**
      * H5Pset_fill_value sets the fill value for a dataset creation property list.
@@ -9067,15 +9394,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error converting data array
+     *            Error converting data array
      **/
-    public synchronized static int H5Pset_fill_value(long plist_id, long type_id, Object obj) throws HDF5Exception {
+    public synchronized static int H5Pset_fill_value(long plist_id, long type_id, Object obj)
+        throws HDF5Exception
+    {
         HDFArray theArray = new HDFArray(obj);
-        byte[] buf = theArray.byteify();
+        byte[] buf        = theArray.byteify();
 
         int retVal = H5Pset_fill_value(plist_id, type_id, buf);
 
-        buf = null;
+        buf      = null;
         theArray = null;
         return retVal;
     }
@@ -9095,10 +9424,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error converting data array
+     *            Error converting data array
      **/
     public synchronized static native int H5Pfill_value_defined(long plist_id, int[] status)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_alloc_time Gets space allocation time for dataset during creation.
@@ -9111,11 +9440,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pget_alloc_time(long plist_id, int[] alloc_time)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_alloc_time Sets space allocation time for dataset during creation.
@@ -9128,11 +9457,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_alloc_time(long plist_id, int alloc_time) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pset_alloc_time(long plist_id, int alloc_time)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fill_time Gets fill value writing time.
@@ -9145,10 +9474,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_fill_time(long plist_id, int[] fill_time) throws HDF5LibraryException;
+    public synchronized static native int H5Pget_fill_time(long plist_id, int[] fill_time)
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_fill_time Sets the fill value writing time.
@@ -9161,10 +9491,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fill_time(long plist_id, int fill_time) throws HDF5LibraryException;
+    public synchronized static native int H5Pset_fill_time(long plist_id, int fill_time)
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_chunk_opts Sets the edge chunk option in a dataset creation property list.
@@ -9177,12 +9508,13 @@ public class H5 implements java.io.Serializable {
      *                0 - Disables option; partial edge chunks will be compressed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library
+     *            Error from the HDF-5 Library
      **/
-    public synchronized static native void H5Pset_chunk_opts(long dcpl_id, int opts) throws HDF5LibraryException;
+    public synchronized static native void H5Pset_chunk_opts(long dcpl_id, int opts)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_chunk_opts retrieves the edge chunk option setting stored in the dataset creation property list .
+     * H5Pget_chunk_opts retrieves the edge chunk option setting stored in the dataset creation property list
      *
      * @param dcpl_id
      *            IN: Dataset creation property list
@@ -9190,13 +9522,14 @@ public class H5 implements java.io.Serializable {
      * @return The edge chunk option setting.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library
-     **/
+     *            Error from the HDF-5 Library
+     *
+   */
     public synchronized static native int H5Pget_chunk_opts(long dcpl_id) throws HDF5LibraryException;
 
     /**
      * H5Pget_dset_no_attrs_hint accesses the flag for whether or not datasets created by the given dcpl
-     *     will be created with a "minimized" object header.
+     * will be created with a "minimized" object header.
      *
      * @param dcpl_id
      *            IN: Dataset creation property list
@@ -9204,33 +9537,32 @@ public class H5 implements java.io.Serializable {
      * @return true if the given dcpl is set to create minimized dataset object headers, false if not.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Pget_dset_no_attrs_hint(long dcpl_id)
-            throws HDF5LibraryException;
-
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_dset_no_attrs_hint sets the dcpl to minimize (or explicitly to not minimized) dataset object
-     *     headers upon creation.
+     * headers upon creation.
      *
      * @param dcpl_id
      *            IN: Dataset creation property list
      *
      * @param minimize
-     *          the minimize hint setting
+     *            IN: the minimize hint setting
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Pset_dset_no_attrs_hint(long dcpl_id, boolean minimize)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     // /////// Dataset access property list (DAPL) routines ///////
 
     /**
-     * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible number of bytes
-     * and the RDCC_W0 value in the raw data chunk cache on a per-datset basis.
+     * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible
+     * number of bytes and the RDCC_W0 value in the raw data chunk cache on a per-datset basis.
      *
      * @param dapl_id
      *            IN: Identifier of the dataset access property list.
@@ -9242,16 +9574,17 @@ public class H5 implements java.io.Serializable {
      *            IN/OUT: Preemption policy.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an array is null.
+     *            an array is null.
      **/
-    public synchronized static native void H5Pget_chunk_cache(long dapl_id, long[] rdcc_nslots, long[] rdcc_nbytes,
-            double[] rdcc_w0) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Pget_chunk_cache(long dapl_id, long[] rdcc_nslots,
+                                                              long[] rdcc_nbytes, double[] rdcc_w0)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_chunk_cache sets the number of elements (objects) in the meta data cache and the total number of bytes in
-     * the raw data chunk cache on a per-datset basis.
+     * H5Pset_chunk_cache sets the number of elements (objects) in the meta data cache and the total number of
+     * bytes in the raw data chunk cache on a per-datset basis.
      *
      * @param dapl_id
      *            IN: Identifier of the dataset access property list.
@@ -9263,10 +9596,11 @@ public class H5 implements java.io.Serializable {
      *            IN: Preemption policy.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Pset_chunk_cache(long dapl_id, long rdcc_nslots, long rdcc_nbytes,
-            double rdcc_w0) throws HDF5LibraryException;
+    public synchronized static native void H5Pset_chunk_cache(long dapl_id, long rdcc_nslots,
+                                                              long rdcc_nbytes, double rdcc_w0)
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_virtual_view takes the access property list for the virtual dataset, dapl_id, and the flag,
@@ -9278,9 +9612,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Flag specifying the extent of the data to be included in the view.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library
+     *            Error from the HDF-5 Library
      **/
-    public synchronized static native void H5Pset_virtual_view(long dapl_id, int view) throws HDF5LibraryException;
+    public synchronized static native void H5Pset_virtual_view(long dapl_id, int view)
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_virtual_view takes the virtual dataset access property list, dapl_id, and retrieves the flag,
@@ -9292,26 +9627,28 @@ public class H5 implements java.io.Serializable {
      * @return The flag specifying the view of the virtual dataset.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library
-     **/
+     *            Error from the HDF-5 Library
+     *
+   */
     public synchronized static native int H5Pget_virtual_view(long dapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Pset_virtual_printf_gap sets the access property list for the virtual dataset, dapl_id, to instruct the
-     * library to stop looking for the mapped data stored in the files and/or datasets with the printf-style names
-     * after not finding gap_size files and/or datasets. The found source files and datasets will determine the
-     * extent of the unlimited virtual dataset with the printf-style mappings.
+     * H5Pset_virtual_printf_gap sets the access property list for the virtual dataset, dapl_id, to instruct
+     * the library to stop looking for the mapped data stored in the files and/or datasets with the
+     * printf-style names after not finding gap_size files and/or datasets. The found source files and
+     * datasets will determine the extent of the unlimited virtual dataset with the printf-style mappings.
      *
      * @param dapl_id
      *            IN: Dataset access property list identifier for the virtual dataset
      * @param gap_size
      *            IN: Maximum number of files and/or datasets allowed to be missing for determining
-     *            the extent of an unlimited virtual dataset with printf-style mappings.
+     *                the extent of an unlimited virtual dataset with printf-style mappings.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library
+     *            Error from the HDF-5 Library
      **/
-    public synchronized static native void H5Pset_virtual_printf_gap(long dapl_id, long gap_size) throws HDF5LibraryException;
+    public synchronized static native void H5Pset_virtual_printf_gap(long dapl_id, long gap_size)
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_virtual_printf_gap returns the maximum number of missing printf-style files and/or datasets for
@@ -9325,9 +9662,11 @@ public class H5 implements java.io.Serializable {
      *            the extent of an unlimited virtual dataset with printf-style mappings.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library
-     **/
-    public synchronized static native long H5Pget_virtual_printf_gap(long dapl_id) throws HDF5LibraryException;
+     *            Error from the HDF-5 Library
+     *
+   */
+    public synchronized static native long H5Pget_virtual_printf_gap(long dapl_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_virtual_prefix Retrieves prefix applied to virtual file paths.
@@ -9338,11 +9677,10 @@ public class H5 implements java.io.Serializable {
      * @return the prefix to be applied to virtual file paths.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native String H5Pget_virtual_prefix(long dapl_id)
-            throws HDF5LibraryException;
+    public synchronized static native String H5Pget_virtual_prefix(long dapl_id) throws HDF5LibraryException;
 
     /**
      * H5Pset_virtual_prefix Sets prefix to be applied to virtual file paths.
@@ -9353,13 +9691,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Prefix to be applied to virtual file paths
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - prefix is null.
+     *            prefix is null.
      *
      **/
     public synchronized static native void H5Pset_virtual_prefix(long dapl_id, String prefix)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_efile_prefix Retrieves prefix applied to external file paths.
@@ -9370,11 +9708,10 @@ public class H5 implements java.io.Serializable {
      * @return the prefix to be applied to external file paths.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native String H5Pget_efile_prefix(long dapl_id)
-            throws HDF5LibraryException;
+    public synchronized static native String H5Pget_efile_prefix(long dapl_id) throws HDF5LibraryException;
 
     /**
      * H5Pset_efile_prefix Sets prefix to be applied to external file paths.
@@ -9385,24 +9722,25 @@ public class H5 implements java.io.Serializable {
      *            IN: Prefix to be applied to external file paths
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - prefix is null.
+     *            prefix is null.
      *
      **/
     public synchronized static native void H5Pset_efile_prefix(long dapl_id, String prefix)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
-    // public synchronized static native void H5Pset_append_flush(long plist_id, int ndims, long[] boundary, H5D_append_cb func, H5D_append_t udata) throws HDF5LibraryException;
-
-    // public synchronized static native void H5Pget_append_flush(long plist_id, int dims, long[] boundary, H5D_append_cb func, H5D_append_t udata) throws HDF5LibraryException;
+    // public synchronized static native void H5Pset_append_flush(long plist_id, int ndims, long[] boundary,
+    // H5D_append_cb func, H5D_append_t udata) throws HDF5LibraryException;
 
+    // public synchronized static native void H5Pget_append_flush(long plist_id, int dims, long[] boundary,
+    // H5D_append_cb func, H5D_append_t udata) throws HDF5LibraryException;
 
     // /////// Dataset xfer property list (DXPL) routines ///////
 
     /**
-     * H5Pget_data_transform retrieves the data transform expression previously set in the dataset transfer property
-     * list plist_id by H5Pset_data_transform.
+     * H5Pget_data_transform retrieves the data transform expression previously set in the dataset transfer
+     * property list plist_id by H5Pset_data_transform.
      *
      * @param plist_id
      *            IN: Identifier of the property list or class
@@ -9411,18 +9749,19 @@ public class H5 implements java.io.Serializable {
      * @param expression
      *            OUT: A data transform expression
      *
-     * @return The size of the transform expression if successful; 0(zero) if no transform expression exists. Otherwise
-     *         returns a negative value.
+     * @return The size of the transform expression if successful; 0(zero) if no transform expression exists.
+     *         Otherwise returns a negative value.
      *
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Size is <= 0.
+     *            Size is <= 0.
      *
      **/
-    public synchronized static native long H5Pget_data_transform(long plist_id, String[] expression, long size)
-            throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native long H5Pget_data_transform(long plist_id, String[] expression,
+                                                                 long size)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pset_data_transform sets a data transform expression
@@ -9435,17 +9774,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative valule if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - expression is null.
+     *            expression is null.
      *
      **/
     public synchronized static native int H5Pset_data_transform(long plist_id, String expression)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * HH5Pget_buffer gets type conversion and background buffers. Returns buffer size, in bytes, if successful;
-     * otherwise 0 on failure.
+     * HH5Pget_buffer gets type conversion and background buffers. Returns buffer size, in bytes, if
+     * successful; otherwise 0 on failure.
      *
      * @param plist
      *            Identifier for the dataset transfer property list.
@@ -9457,12 +9796,12 @@ public class H5 implements java.io.Serializable {
      * @return buffer size, in bytes, if successful; otherwise 0 on failure
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - plist is invalid.
+     *            plist is invalid.
      **/
     public synchronized static native int H5Pget_buffer(long plist, byte[] tconv, byte[] bkg)
-            throws HDF5LibraryException, IllegalArgumentException;
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_buffer_size gets type conversion and background buffer size, in bytes, if successful;
@@ -9474,26 +9813,27 @@ public class H5 implements java.io.Serializable {
      * @return buffer size, in bytes, if successful; otherwise 0 on failure
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - plist is invalid.
+     *            plist is invalid.
      **/
     public synchronized static native long H5Pget_buffer_size(long plist)
-            throws HDF5LibraryException, IllegalArgumentException;
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pset_buffer sets type conversion and background buffers. status to TRUE or FALSE.
      *
-     * Given a dataset transfer property list, H5Pset_buffer sets the maximum size for the type conversion buffer and
-     * background buffer and optionally supplies pointers to application-allocated buffers. If the buffer size is
-     * smaller than the entire amount of data being transferred between the application and the file, and a type
-     * conversion buffer or background buffer is required, then strip mining will be used.
+     * Given a dataset transfer property list, H5Pset_buffer sets the maximum size for the type conversion
+     * buffer and background buffer and optionally supplies pointers to application-allocated buffers. If the
+     * buffer size is smaller than the entire amount of data being transferred between the application and the
+     * file, and a type conversion buffer or background buffer is required, then strip mining will be used.
      *
-     * Note that there are minimum size requirements for the buffer. Strip mining can only break the data up along the
-     * first dimension, so the buffer must be large enough to accommodate a complete slice that encompasses all of the
-     * remaining dimensions. For example, when strip mining a 100x200x300 hyperslab of a simple data space, the buffer
-     * must be large enough to hold 1x200x300 data elements. When strip mining a 100x200x300x150 hyperslab of a simple
-     * data space, the buffer must be large enough to hold 1x200x300x150 data elements.
+     * Note that there are minimum size requirements for the buffer. Strip mining can only break the data up
+     * along the first dimension, so the buffer must be large enough to accommodate a complete slice that
+     * encompasses all of the remaining dimensions. For example, when strip mining a 100x200x300 hyperslab of
+     * a simple data space, the buffer must be large enough to hold 1x200x300 data elements. When strip mining
+     * a 100x200x300x150 hyperslab of a simple data space, the buffer must be large enough to hold
+     * 1x200x300x150 data elements.
      *
      * @param plist
      *            Identifier for the dataset transfer property list.
@@ -9501,12 +9841,12 @@ public class H5 implements java.io.Serializable {
      *            Size, in bytes, of the type conversion and background buffers.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - plist is invalid.
+     *            plist is invalid.
      **/
-    public synchronized static native void H5Pset_buffer_size(long plist, long size) throws HDF5LibraryException,
-    IllegalArgumentException;
+    public synchronized static native void H5Pset_buffer_size(long plist, long size)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_edc_check gets the error-detecting algorithm in use.
@@ -9517,7 +9857,7 @@ public class H5 implements java.io.Serializable {
      * @return the error-detecting algorithm
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pget_edc_check(long plist) throws HDF5LibraryException;
 
@@ -9532,7 +9872,7 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Pset_edc_check(long plist, int check) throws HDF5LibraryException;
 
@@ -9551,16 +9891,17 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      **/
     public synchronized static native int H5Pget_btree_ratios(long plist_id, double[] left, double[] middle,
-            double[] right) throws HDF5LibraryException, NullPointerException;
+                                                              double[] right)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_btree_ratio Sets B-tree split ratios for a dataset transfer property list. The split ratios determine what
-     * percent of children go in the first node when a node splits.
+     * H5Pset_btree_ratio Sets B-tree split ratios for a dataset transfer property list. The split ratios
+     * determine what percent of children go in the first node when a node splits.
      *
      * @param plist_id
      *            IN Dataset transfer property list
@@ -9574,10 +9915,10 @@ public class H5 implements java.io.Serializable {
      * @return non-negative if succeed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Pset_btree_ratios(long plist_id, double left, double middle, double right)
-            throws HDF5LibraryException;
+    public synchronized static native int H5Pset_btree_ratios(long plist_id, double left, double middle,
+                                                              double right) throws HDF5LibraryException;
 
     /**
      * H5Pget_hyper_vector_size reads values previously set with H5Pset_hyper_vector_size.
@@ -9590,11 +9931,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pget_hyper_vector_size(long dxpl_id, long[] vector_size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_hyper_vector_size sets the number of
@@ -9604,7 +9945,7 @@ public class H5 implements java.io.Serializable {
      *              Increasing the number should give better performance, but use
      *              more memory during hyperslab I/O.  The vector size must be
      *              greater than 1.
-     *,p.
+     *
    
      *              The default is to use 1024 vectors for I/O during hyperslab
      *              reading/writing.
      *
@@ -9616,17 +9957,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_hyper_vector_size(long dxpl_id, long vector_size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     // /////// Link creation property list (LCPL) routines ///////
 
     /**
-     * H5Pget_create_intermediate_group determines whether property is set to enable creating missing intermediate
-     * groups.
+     * H5Pget_create_intermediate_group determines whether property is set to enable creating missing
+     * intermediate groups.
      *
      * @param lcpl_id
      *            IN: Link creation property list identifier
@@ -9634,14 +9975,15 @@ public class H5 implements java.io.Serializable {
      * @return Boolean true or false
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native boolean H5Pget_create_intermediate_group(long lcpl_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_create_intermediate_group specifies in property list whether to create missing intermediate groups
+     * H5Pset_create_intermediate_group specifies in property list whether to create missing intermediate
+     * groups
      *
      * @param lcpl_id
      *            IN: Link creation property list identifier
@@ -9651,11 +9993,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative valule if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_create_intermediate_group(long lcpl_id, boolean crt_intermed_group)
-            throws HDF5LibraryException;
+    public synchronized static native int H5Pset_create_intermediate_group(long lcpl_id,
+                                                                           boolean crt_intermed_group)
+        throws HDF5LibraryException;
 
     // /////// Group creation property list (GCPL) routines ///////
 
@@ -9668,10 +10011,11 @@ public class H5 implements java.io.Serializable {
      * @return size_hint, the anticipated size of local heap
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native long H5Pget_local_heap_size_hint(long gcpl_id) throws HDF5LibraryException;
+    public synchronized static native long H5Pget_local_heap_size_hint(long gcpl_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_local_heap_size_hint Specifies the anticipated maximum size of a local heap.
@@ -9684,11 +10028,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_local_heap_size_hint(long gcpl_id, long size_hint)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Pget_link_phase_change Queries the settings for conversion between compact and dense groups.
@@ -9696,7 +10040,8 @@ public class H5 implements java.io.Serializable {
      * @param gcpl_id
      *            IN: Group creation property list identifier
      * @param links
-     *            The max. no. of compact links & the min. no. of dense links, which are used for storing groups
+     *            The max. no. of compact links & the min. no. of dense links, which are used for storing
+     *            groups
      *
      *            
          *      links[0] =  The maximum number of links for compact storage
@@ -9706,13 +10051,13 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      *
      **/
     public synchronized static native int H5Pget_link_phase_change(long gcpl_id, int[] links)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_link_phase_change Sets the parameters for conversion between compact and dense groups.
@@ -9727,13 +10072,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values of max_compact and min_dense.
+     *            Invalid values of max_compact and min_dense.
      *
      **/
-    public synchronized static native int H5Pset_link_phase_change(long gcpl_id, int max_compact, int min_dense)
-            throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native int H5Pset_link_phase_change(long gcpl_id, int max_compact,
+                                                                   int min_dense)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_est_link_info Queries data required to estimate required local heap or object header size.
@@ -9741,7 +10087,8 @@ public class H5 implements java.io.Serializable {
      * @param gcpl_id
      *            IN: Group creation property list identifier
      * @param link_info
-     *            Estimated number of links to be inserted into group And the estimated average length of link names
+     *            Estimated number of links to be inserted into group And the estimated average length of link
+     *            names
      *
      *            
          *      link_info[0] =  Estimated number of links to be inserted into group
@@ -9751,13 +10098,13 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - link_info is null.
+     *            link_info is null.
      *
      **/
     public synchronized static native int H5Pget_est_link_info(long gcpl_id, int[] link_info)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_est_link_info Sets estimated number of links and length of link names in a group.
@@ -9772,17 +10119,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid values to est_num_entries and est_name_len.
+     *            Invalid values to est_num_entries and est_name_len.
      *
      **/
-    public synchronized static native int H5Pset_est_link_info(long gcpl_id, int est_num_entries, int est_name_len)
-            throws HDF5LibraryException, IllegalArgumentException;
+    public synchronized static native int H5Pset_est_link_info(long gcpl_id, int est_num_entries,
+                                                               int est_name_len)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
-     * H5Pget_link_creation_order queries the group creation property list, gcpl_id, and returns a flag indicating
-     * whether link creation order is tracked and/or indexed in a group.
+     * H5Pget_link_creation_order queries the group creation property list, gcpl_id, and returns a flag
+     * indicating whether link creation order is tracked and/or indexed in a group.
      *
      * @param gcpl_id
      *            IN: Group creation property list identifier
@@ -9790,14 +10138,15 @@ public class H5 implements java.io.Serializable {
      * @return crt_order_flags -Creation order flag(s)
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_link_creation_order(long gcpl_id) throws HDF5LibraryException;
+    public synchronized static native int H5Pget_link_creation_order(long gcpl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pset_link_creation_order Sets flags in a group creation property list, gcpl_id, for tracking and/or indexing
-     * links on creation order.
+     * H5Pset_link_creation_order Sets flags in a group creation property list, gcpl_id, for tracking and/or
+     * indexing links on creation order.
      *
      * @param gcpl_id
      *            IN: Group creation property list identifier
@@ -9808,11 +10157,11 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_link_creation_order(long gcpl_id, int crt_order_flags)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     // /////// String creation property list (STRCPL) routines ///////
 
@@ -9825,7 +10174,7 @@ public class H5 implements java.io.Serializable {
      * @return Returns the character encoding of the string.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pget_char_encoding(long plist_id) throws HDF5LibraryException;
@@ -9839,18 +10188,18 @@ public class H5 implements java.io.Serializable {
      *            IN: the character encoding of the string
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native void H5Pset_char_encoding(long plist_id, int encoding)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     // /////// Link access property list (LAPL) routines ///////
 
     /**
-     * H5Pget_nlinks retrieves the maximum number of soft or user-defined link traversals allowed, nlinks, before the
-     * library assumes it has found a cycle and aborts the traversal. This value is retrieved from the link access
-     * property list lapl_id.
+     * H5Pget_nlinks retrieves the maximum number of soft or user-defined link traversals allowed, nlinks,
+     * before the library assumes it has found a cycle and aborts the traversal. This value is retrieved from
+     * the link access property list lapl_id.
      *
      * @param lapl_id
      *            IN: File access property list identifier
@@ -9858,15 +10207,15 @@ public class H5 implements java.io.Serializable {
      * @return Returns a Maximum number of links to traverse.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native long H5Pget_nlinks(long lapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Pset_nlinks sets the maximum number of soft or user-defined link traversals allowed, nlinks, before the library
-     * assumes it has found a cycle and aborts the traversal. This value is set in the link access property list
-     * lapl_id.
+     * H5Pset_nlinks sets the maximum number of soft or user-defined link traversals allowed, nlinks, before
+     * the library assumes it has found a cycle and aborts the traversal. This value is set in the link access
+     * property list lapl_id.
      *
      * @param lapl_id
      *            IN: File access property list identifier
@@ -9876,13 +10225,13 @@ public class H5 implements java.io.Serializable {
      * @return Returns a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Argument is Illegal
+     *            Argument is Illegal
      *
      **/
-    public synchronized static native int H5Pset_nlinks(long lapl_id, long nlinks) throws HDF5LibraryException,
-    IllegalArgumentException;
+    public synchronized static native int H5Pset_nlinks(long lapl_id, long nlinks)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     /**
      * H5Pget_elink_prefix Retrieves prefix applied to external link paths.
@@ -9892,17 +10241,17 @@ public class H5 implements java.io.Serializable {
      * @param prefix
      *            OUT: Prefix applied to external link paths
      *
-     * @return If successful, returns a non-negative value specifying the size in bytes of the prefix without the NULL
-     *         terminator; otherwise returns a negative value.
+     * @return If successful, returns a non-negative value specifying the size in bytes of the prefix without
+     *         the NULL terminator; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - prefix is null.
+     *            prefix is null.
      *
      **/
     public synchronized static native long H5Pget_elink_prefix(long lapl_id, String[] prefix)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_elink_prefix Sets prefix to be applied to external link paths.
@@ -9915,17 +10264,17 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - prefix is null.
+     *            prefix is null.
      *
      **/
-    public synchronized static native int H5Pset_elink_prefix(long lapl_id, String prefix) throws HDF5LibraryException,
-    NullPointerException;
+    public synchronized static native int H5Pset_elink_prefix(long lapl_id, String prefix)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pget_elink_fapl Retrieves the file access property list identifier associated with the link access property
-     * list.
+     * H5Pget_elink_fapl Retrieves the file access property list identifier associated with the link access
+     * property list.
      *
      * @param lapl_id
      *            IN: Link access property list identifier
@@ -9933,10 +10282,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public static long H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException {
+    public static long H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException
+    {
         long id = _H5Pget_elink_fapl(lapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Pget_elink_fapl add {}", id);
@@ -9949,7 +10299,8 @@ public class H5 implements java.io.Serializable {
     private synchronized static native long _H5Pget_elink_fapl(long lapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Pset_elink_fapl sets a file access property list for use in accessing a file pointed to by an external link.
+     * H5Pset_elink_fapl sets a file access property list for use in accessing a file pointed to by an
+     * external link.
      *
      * @param lapl_id
      *            IN: Link access property list identifier
@@ -9959,14 +10310,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_elink_fapl(long lapl_id, long fapl_id) throws HDF5LibraryException;
+    public synchronized static native int H5Pset_elink_fapl(long lapl_id, long fapl_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Pget_elink_acc_flags retrieves the external link traversal file access flag from the specified link access
-     * property list.
+     * H5Pget_elink_acc_flags retrieves the external link traversal file access flag from the specified link
+     * access property list.
      *
      * @param lapl_id
      *            IN: Link access property list identifier
@@ -9974,13 +10326,14 @@ public class H5 implements java.io.Serializable {
      * @return File access flag for link traversal.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pget_elink_acc_flags(long lapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Pset_elink_acc_flags Sets the external link traversal file access flag in a link access property list.
+     * H5Pset_elink_acc_flags Sets the external link traversal file access flag in a link access property
+     * list.
      *
      * @param lapl_id
      *            IN: Link access property list identifier
@@ -9990,13 +10343,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception IllegalArgumentException
-     *                - Invalid Flag values.
+     *            Invalid Flag values.
      *
      **/
-    public synchronized static native int H5Pset_elink_acc_flags(long lapl_id, int flags) throws HDF5LibraryException,
-    IllegalArgumentException;
+    public synchronized static native int H5Pset_elink_acc_flags(long lapl_id, int flags)
+        throws HDF5LibraryException, IllegalArgumentException;
 
     // /////// Object copy property list (OCPYPL) routines ///////
 
@@ -10009,7 +10362,7 @@ public class H5 implements java.io.Serializable {
      * @return Copy option(s) set in the object copy property list
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pget_copy_object(long ocp_plist_id) throws HDF5LibraryException;
@@ -10023,11 +10376,11 @@ public class H5 implements java.io.Serializable {
      *            IN: Copy option(s) to be set
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native void H5Pset_copy_object(long ocp_plist_id, int copy_options)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     // /////// file drivers property list routines ///////
 
@@ -10042,11 +10395,12 @@ public class H5 implements java.io.Serializable {
      *            OUT: write to file name on flush setting
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native void H5Pget_fapl_core(long fapl_id, long[] increment, boolean[] backing_store)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Pget_fapl_core(long fapl_id, long[] increment,
+                                                            boolean[] backing_store)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_core modifies the file access property list to use the H5FD_CORE driver.
@@ -10061,11 +10415,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fapl_core(long fapl_id, long increment, boolean backing_store)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pset_fapl_core(long fapl_id, long increment,
+                                                           boolean backing_store)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_fapl_direct queries properties set by the H5Pset_fapl_direct.
@@ -10080,10 +10435,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_fapl_direct(long fapl_id, long[] info) throws HDF5LibraryException;
+    public synchronized static native int H5Pget_fapl_direct(long fapl_id, long[] info)
+        throws HDF5LibraryException;
 
     /**
      * H5Pset_fapl_direct Sets up use of the direct I/O driver.
@@ -10100,11 +10456,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_direct(long fapl_id, long alignment, long block_size,
-            long cbuf_size) throws HDF5LibraryException;
+                                                             long cbuf_size) throws HDF5LibraryException;
 
     /**
      * H5Pget_fapl_family Returns information about the family file access property list.
@@ -10119,11 +10475,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pget_fapl_family(long fapl_id, long[] memb_size, long[] memb_fapl_id)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pget_fapl_family(long fapl_id, long[] memb_size,
+                                                             long[] memb_fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_family Sets up use of the direct I/O driver.
@@ -10138,11 +10495,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
     public synchronized static native int H5Pset_fapl_family(long fapl_id, long memb_size, long memb_fapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_hdfs Modify the file access property list to use the H5FD_HDFS driver.
@@ -10155,10 +10512,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fapl_hdfs(long fapl_id, H5FD_hdfs_fapl_t fapl_conf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pset_fapl_hdfs(long fapl_id, H5FD_hdfs_fapl_t fapl_conf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_fapl_hdfs gets the properties hdfs I/O driver.
@@ -10169,10 +10527,11 @@ public class H5 implements java.io.Serializable {
      * @return the properties of the hdfs driver.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native H5FD_hdfs_fapl_t H5Pget_fapl_hdfs(long fapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5FD_hdfs_fapl_t H5Pget_fapl_hdfs(long fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_fapl_multi Sets up use of the multi I/O driver.
@@ -10186,19 +10545,21 @@ public class H5 implements java.io.Serializable {
      * @param memb_name
      *            IN: Name generator for names of member files.
      * @param memb_addr
-     *            IN: The offsets within the virtual address space, from 0 (zero) to HADDR_MAX, at which each type of
-     *            data storage begins.
+     *            IN: The offsets within the virtual address space, from 0 (zero) to HADDR_MAX, at which each
+     *                type of data storage begins.
      *
      * @return a boolean value; Allows read-only access to incomplete file sets when TRUE.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an array is null.
+     *            an array is null.
      *
      **/
-    public synchronized static native boolean H5Pget_fapl_multi(long fapl_id, int[] memb_map, long[] memb_fapl,
-            String[] memb_name, long[] memb_addr) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native boolean H5Pget_fapl_multi(long fapl_id, int[] memb_map,
+                                                                long[] memb_fapl, String[] memb_name,
+                                                                long[] memb_addr)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_multi Sets up use of the multi I/O driver.
@@ -10212,25 +10573,27 @@ public class H5 implements java.io.Serializable {
      * @param memb_name
      *            IN: Name generator for names of member files.
      * @param memb_addr
-     *            IN: The offsets within the virtual address space, from 0 (zero) to HADDR_MAX, at which each type of
-     *            data storage begins.
+     *            IN: The offsets within the virtual address space, from 0 (zero) to HADDR_MAX, at which each
+     *                type of data storage begins.
      * @param relax
      *            IN: Allows read-only access to incomplete file sets when TRUE.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an array is null.
+     *            an array is null.
      *
      **/
     public synchronized static native void H5Pset_fapl_multi(long fapl_id, int[] memb_map, long[] memb_fapl,
-            String[] memb_name, long[] memb_addr, boolean relax) throws HDF5LibraryException, NullPointerException;
-
+                                                             String[] memb_name, long[] memb_addr,
+                                                             boolean relax)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Pset_fapl_log Sets up the logging virtual file driver (H5FD_LOG) for use. H5Pset_fapl_log modifies the file
-     * access property list to use the logging driver, H5FD_LOG. The logging virtual file driver (VFD) is a clone of the
-     * standard SEC2 (H5FD_SEC2) driver with additional facilities for logging VFD metrics and activity to a file.
+     * H5Pset_fapl_log Sets up the logging virtual file driver (H5FD_LOG) for use. H5Pset_fapl_log modifies
+     * the file access property list to use the logging driver, H5FD_LOG. The logging virtual file driver
+     * (VFD) is a clone of the standard SEC2 (H5FD_SEC2) driver with additional facilities for logging VFD
+     * metrics and activity to a file.
      *
      * @param fapl_id
      *            IN: File access property list identifier.
@@ -10242,12 +10605,13 @@ public class H5 implements java.io.Serializable {
      *            IN: The size of the logging buffers, in bytes.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - logfile is null.
+     *            logfile is null.
      **/
-    public synchronized static native void H5Pset_fapl_log(long fapl_id, String logfile, long flags, long buf_size)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Pset_fapl_log(long fapl_id, String logfile, long flags,
+                                                           long buf_size)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_sec2 Sets up use of the sec2 I/O driver.
@@ -10258,10 +10622,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fapl_sec2(long fapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pset_fapl_sec2(long fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_split Sets up use of the split I/O driver. Makes the multi driver act like the
@@ -10280,11 +10645,12 @@ public class H5 implements java.io.Serializable {
      *            IN: File access property list identifier raw data
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native void H5Pset_fapl_split(long fapl_id, String meta_ext, long meta_plist_id,
-            String raw_ext, long raw_plist_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void
+    H5Pset_fapl_split(long fapl_id, String meta_ext, long meta_plist_id, String raw_ext, long raw_plist_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_stdio Sets up use of the stdio I/O driver.
@@ -10295,10 +10661,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fapl_stdio(long fapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pset_fapl_stdio(long fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_windows Sets up use of the windows I/O driver.
@@ -10309,10 +10676,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fapl_windows(long fapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pset_fapl_windows(long fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pset_fapl_ros3 Modify the file access property list to use the H5FD_ROS3 driver.
@@ -10325,10 +10693,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful; otherwise returns a negative value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native int H5Pset_fapl_ros3(long fapl_id, H5FD_ros3_fapl_t fapl_conf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Pset_fapl_ros3(long fapl_id, H5FD_ros3_fapl_t fapl_conf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Pget_fapl_ros3 gets the properties of the ros3 I/O driver.
@@ -10339,10 +10708,11 @@ public class H5 implements java.io.Serializable {
      * @return the properties of the ros3 driver.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      *
      **/
-    public synchronized static native H5FD_ros3_fapl_t H5Pget_fapl_ros3(long fapl_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native H5FD_ros3_fapl_t H5Pget_fapl_ros3(long fapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     // /////// unimplemented ////////
 
@@ -10373,32 +10743,35 @@ public class H5 implements java.io.Serializable {
     // #endif /* H5_HAVE_PARALLEL */
     //  herr_t H5Pset_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr);
     //  herr_t H5Pget_mdc_image_config(hid_t plist_id, H5AC_cache_image_config_t *config_ptr /*out*/);
-    //  herr_t H5Pset_page_buffer_size(hid_t plist_id, size_t buf_size, unsigned min_meta_per, unsigned min_raw_per);
-    // herr_t H5Pget_page_buffer_size(hid_t fapl_id, size_t *buf_size, unsigned *min_meta_perc, unsigned *min_raw_perc);
-    // herr_t H5Pset_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t func, void *user_data);
+    //  herr_t H5Pset_page_buffer_size(hid_t plist_id, size_t buf_size, unsigned min_meta_per, unsigned
+    //  min_raw_per);
+    // herr_t H5Pget_page_buffer_size(hid_t fapl_id, size_t *buf_size, unsigned *min_meta_perc, unsigned
+    // *min_raw_perc); herr_t H5Pset_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t func, void *user_data);
     // herr_t H5Pget_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t *func, void **user_data);
 
     // Dataset creation property list (DCPL) routines //
 
     // Dataset access property list (DAPL) routines //
-    // herr_t H5Pset_append_flush (hid_t dapl_id, int ndims, const hsize_t boundary[], H5D_append_cb_t func, void *user_data);
-    // herr_t H5Pget_append_flush(hid_t dapl_id, int ndims, hsize_t boundary[], H5D_append_cb_t *func, void **user_data)
+    // herr_t H5Pset_append_flush (hid_t dapl_id, int ndims, const hsize_t boundary[], H5D_append_cb_t func,
+    // void *user_data); herr_t H5Pget_append_flush(hid_t dapl_id, int ndims, hsize_t boundary[],
+    // H5D_append_cb_t *func, void **user_data)
 
     // Dataset xfer property list (DXPL) routines //
     // herr_t H5Pset_buffer(hid_t plist_id, size_t size, void *tconv, void *bkg);
     // herr_t H5Pset_preserve(hid_t plist_id, hbool_t status);
     // int H5Pget_preserve(hid_t plist_id);
     // herr_t H5Pset_filter_callback(hid_t plist, H5Z_filter_func_t func, void *op_data)
-    // herr_t H5Pget_vlen_mem_manager(hid_t plist, H5MM_allocate_t *alloc, void **alloc_info, H5MM_free_t *free, void
+    // herr_t H5Pget_vlen_mem_manager(hid_t plist, H5MM_allocate_t *alloc, void **alloc_info, H5MM_free_t
+    // *free, void
     // **free_info )
-    // herr_t H5Pset_vlen_mem_manager(hid_t plist, H5MM_allocate_t alloc, void *alloc_info, H5MM_free_t free, void
-    // *free_info )
-    // herr_t H5Pget_type_conv_cb(hid_t plist, H5T_conv_except_func_t *func, void **op_data)
+    // herr_t H5Pset_vlen_mem_manager(hid_t plist, H5MM_allocate_t alloc, void *alloc_info, H5MM_free_t free,
+    // void *free_info ) herr_t H5Pget_type_conv_cb(hid_t plist, H5T_conv_except_func_t *func, void **op_data)
     // herr_t H5Pset_type_conv_cb( hid_t plist, H5T_conv_except_func_t func, void *op_data)
     // #ifdef H5_HAVE_PARALLEL
-    //  herr_t H5Pget_mpio_actual_chunk_opt_mode(hid_t plist_id, H5D_mpio_actual_chunk_opt_mode_t *actual_chunk_opt_mode);
-    //  herr_t H5Pget_mpio_actual_io_mode(hid_t plist_id, H5D_mpio_actual_io_mode_t *actual_io_mode);
-    //  herr_t H5Pget_mpio_no_collective_cause(hid_t plist_id, uint32_t *local_no_collective_cause, uint32_t *global_no_collective_cause);
+    //  herr_t H5Pget_mpio_actual_chunk_opt_mode(hid_t plist_id, H5D_mpio_actual_chunk_opt_mode_t
+    //  *actual_chunk_opt_mode); herr_t H5Pget_mpio_actual_io_mode(hid_t plist_id, H5D_mpio_actual_io_mode_t
+    //  *actual_io_mode); herr_t H5Pget_mpio_no_collective_cause(hid_t plist_id, uint32_t
+    //  *local_no_collective_cause, uint32_t *global_no_collective_cause);
     // #endif /* H5_HAVE_PARALLEL */
 
     // Link creation property list (LCPL) routines //
@@ -10444,9 +10817,10 @@ public class H5 implements java.io.Serializable {
      *
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5PLset_loading_state(int plugin_flags) throws HDF5LibraryException;
+    public synchronized static native void H5PLset_loading_state(int plugin_flags)
+        throws HDF5LibraryException;
 
     /**
      * H5PLget_loading_state retrieves the state of the dynamic plugins flag, plugin_flags..
@@ -10458,7 +10832,7 @@ public class H5 implements java.io.Serializable {
      *             If the value of plugin_flags is 0 (zero), all dynamic plugins are disabled.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5PLget_loading_state() throws HDF5LibraryException;
 
@@ -10469,7 +10843,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Path for location of filter plugin libraries.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5PLappend(String plugin_path) throws HDF5LibraryException;
 
@@ -10480,7 +10854,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Path for location of filter plugin libraries.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5PLprepend(String plugin_path) throws HDF5LibraryException;
 
@@ -10493,9 +10867,10 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5PLreplace(String plugin_path, int index) throws HDF5LibraryException;
+    public synchronized static native void H5PLreplace(String plugin_path, int index)
+        throws HDF5LibraryException;
 
     /**
      * H5PLinsert inserts the plugin path at the specified index.
@@ -10506,9 +10881,10 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5PLinsert(String plugin_path, int index) throws HDF5LibraryException;
+    public synchronized static native void H5PLinsert(String plugin_path, int index)
+        throws HDF5LibraryException;
 
     /**
      * H5PLremove removes the plugin path at the specified index.
@@ -10517,7 +10893,7 @@ public class H5 implements java.io.Serializable {
      *            IN: The table index (0-based).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5PLremove(int index) throws HDF5LibraryException;
 
@@ -10530,7 +10906,7 @@ public class H5 implements java.io.Serializable {
      * @return the current path at the index in plugin path table
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native String H5PLget(int index) throws HDF5LibraryException;
 
@@ -10540,7 +10916,7 @@ public class H5 implements java.io.Serializable {
      * @return the current number of paths in the plugin path table
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5PLsize() throws HDF5LibraryException;
 
@@ -10565,14 +10941,14 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static native byte[] H5Rcreate_object(long loc_id, String name, long access_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rcreate_region creates the reference, pointing to the region represented by
@@ -10590,14 +10966,15 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
-    public synchronized static native byte[] H5Rcreate_region(long loc_id, String name, long space_id, long access_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    public synchronized static native byte[] H5Rcreate_region(long loc_id, String name, long space_id,
+                                                              long access_id)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rcreate_attr creates the reference, pointing to the attribute named attr name
@@ -10615,14 +10992,15 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
-    public synchronized static native byte[] H5Rcreate_attr(long loc_id, String name, String attr_name, long access_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    public synchronized static native byte[] H5Rcreate_attr(long loc_id, String name, String attr_name,
+                                                            long access_id)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rdestroy destroys a reference and releases resources.
@@ -10631,14 +11009,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Reference to an object, region or attribute attached to an object.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static native void H5Rdestroy(byte[] ref_ptr)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     // Info //
 
@@ -10651,14 +11029,14 @@ public class H5 implements java.io.Serializable {
      * @return a valid reference type if successful; otherwise returns H5R UNKNOWN.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static native int H5Rget_type(byte[] ref_ptr)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Requal determines whether two references point to the same object, region or attribute.
@@ -10671,14 +11049,14 @@ public class H5 implements java.io.Serializable {
      * @return true if equal, else false
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static native boolean H5Requal(byte[] ref1_ptr, byte[] ref2_ptr)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rcopy creates a copy of an existing reference.
@@ -10689,14 +11067,14 @@ public class H5 implements java.io.Serializable {
      * @return a valid copy of the reference (byte[]) if successful.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static native byte[] H5Rcopy(byte[] src_ref_ptr)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     // Dereference //
 
@@ -10720,14 +11098,15 @@ public class H5 implements java.io.Serializable {
      * @return a valid identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public static long H5Ropen_object(byte[] ref_ptr, long rapl_id, long oapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException {
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         long id = _H5Ropen_object(ref_ptr, rapl_id, oapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Ropen_object add {}", id);
@@ -10738,12 +11117,13 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Ropen_object(byte[] ref_ptr, long rapl_id, long oapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Ropen region creates a copy of the dataspace of the dataset pointed to by a region reference,
-     * ref ptr, and defines a selection matching the selection pointed to by ref ptr within the dataspace copy.
-     * Use H5Sclose to release the dataspace identifier returned by this function when the identifier is no longer needed.
+     * ref ptr, and defines a selection matching the selection pointed to by ref ptr within the dataspace
+     * copy. Use H5Sclose to release the dataspace identifier returned by this function when the identifier is
+     * no longer needed.
      *
      * @param ref_ptr
      *            IN: Reference to an object, region or attribute attached to an object.
@@ -10759,14 +11139,15 @@ public class H5 implements java.io.Serializable {
      * @return a valid dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public static long H5Ropen_region(byte[] ref_ptr, long rapl_id, long oapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException {
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         long id = _H5Ropen_region(ref_ptr, rapl_id, oapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Ropen_region add {}", id);
@@ -10777,7 +11158,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Ropen_region(byte[] ref_ptr, long rapl_id, long oapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Ropen_attr opens the attribute attached to the object and returns an identifier.
@@ -10798,14 +11179,15 @@ public class H5 implements java.io.Serializable {
      * @return a valid attribute identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public static long H5Ropen_attr(byte[] ref_ptr, long rapl_id, long aapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException {
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         long id = _H5Ropen_attr(ref_ptr, rapl_id, aapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Ropen_attr add {}", id);
@@ -10816,7 +11198,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Ropen_attr(byte[] ref_ptr, long rapl_id, long aapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     // Get type //
 
@@ -10833,14 +11215,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns the object type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - array is null.
+     *            array is null.
      * @exception IllegalArgumentException
-     *                - array is invalid.
+     *            array is invalid.
      **/
     public synchronized static native int H5Rget_obj_type3(byte[] ref_ptr, long rapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     // Get name //
 
@@ -10853,14 +11235,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns the file name of the reference
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - array is null.
+     *            array is null.
      * @exception IllegalArgumentException
-     *                - array is invalid.
+     *            array is invalid.
      **/
     public synchronized static native String H5Rget_file_name(byte[] ref_ptr)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rget_obj_name retrieves the object name for the object, region or attribute reference pointed to.
@@ -10875,14 +11257,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns the object name of the reference
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - array is null.
+     *            array is null.
      * @exception IllegalArgumentException
-     *                - array is invalid.
+     *            array is invalid.
      **/
     public synchronized static native String H5Rget_obj_name(byte[] ref_ptr, long rapl_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rget_attr_name retrieves the attribute name for the object, region or attribute reference pointed to.
@@ -10893,14 +11275,14 @@ public class H5 implements java.io.Serializable {
      * @return Returns the attribute name of the reference
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - array is null.
+     *            array is null.
      * @exception IllegalArgumentException
-     *                - array is invalid.
+     *            array is invalid.
      **/
     public synchronized static native String H5Rget_attr_name(byte[] ref_ptr)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     // ////////////////////////////////////////////////////////////
     // //
@@ -10908,12 +11290,13 @@ public class H5 implements java.io.Serializable {
     // //
     // ////////////////////////////////////////////////////////////
 
-    private synchronized static native int H5Rcreate(byte[] ref, long loc_id, String name, int ref_type, long space_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    private synchronized static native int H5Rcreate(byte[] ref, long loc_id, String name, int ref_type,
+                                                     long space_id)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
-     * H5Rcreate creates the reference, ref, of the type specified in ref_type, pointing to the object name located at
-     * loc_id.
+     * H5Rcreate creates the reference, ref, of the type specified in ref_type, pointing to the object name
+     * located at loc_id.
      *
      * @param loc_id
      *            IN: Location identifier used to locate the object being pointed to.
@@ -10927,14 +11310,15 @@ public class H5 implements java.io.Serializable {
      * @return the reference (byte[]) if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static byte[] H5Rcreate(long loc_id, String name, int ref_type, long space_id)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException {
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         /* These sizes are correct for HDF5.1.2 */
         int ref_size = 8;
         if (ref_type == HDF5Constants.H5R_DATASET_REGION) {
@@ -10963,14 +11347,15 @@ public class H5 implements java.io.Serializable {
      * @return valid identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - output array is null.
+     *            output array is null.
      * @exception IllegalArgumentException
-     *                - output array is invalid.
+     *            output array is invalid.
      **/
     public static long H5Rdereference(long dataset, long access_list, int ref_type, byte[] ref)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException {
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         long id = _H5Rdereference(dataset, access_list, ref_type, ref);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Rdereference add {}", id);
@@ -10980,8 +11365,9 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Rdereference(long dataset, long access_list, int ref_type, byte[] ref)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    private synchronized static native long _H5Rdereference(long dataset, long access_list, int ref_type,
+                                                            byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rget_name retrieves a name for the object identified by ref.
@@ -10997,23 +11383,25 @@ public class H5 implements java.io.Serializable {
      * @param size
      *            IN: The size of the name buffer.
      *
-     * @return Returns the length of the name if successful, returning 0 (zero) if no name is associated with the
-     *         identifier. Otherwise returns a negative value.
+     * @return Returns the length of the name if successful, returning 0 (zero) if no name is associated with
+     *         the identifier. Otherwise returns a negative value.
      *
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - size is null.
+     *            size is null.
      * @exception IllegalArgumentException
-     *                - Argument is illegal.
+     *            Argument is illegal.
      *
      **/
-    public synchronized static native long H5Rget_name(long loc_id, int ref_type, byte[] ref, String[] name, long size)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    public synchronized static native long H5Rget_name(long loc_id, int ref_type, byte[] ref, String[] name,
+                                                       long size)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
-     * H5Rget_obj_type Given a reference to an object ref, H5Rget_obj_type returns the type of the object pointed to.
+     * H5Rget_obj_type Given a reference to an object ref, H5Rget_obj_type returns the type of the object
+     * pointed to.
      *
      * @param loc_id
      *            IN: loc_id of the reference object.
@@ -11025,26 +11413,27 @@ public class H5 implements java.io.Serializable {
      * @return Returns the object type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - array is null.
+     *            array is null.
      * @exception IllegalArgumentException
-     *                - array is invalid.
+     *            array is invalid.
      **/
     public synchronized static native int H5Rget_obj_type(long loc_id, int ref_type, byte ref[])
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Rget_obj_type2 Retrieves the type of object that an object reference points to.
      *
      * @see public static int H5Rget_obj_type(int loc_id, int ref_type, byte ref[])
      **/
-    private synchronized static native int H5Rget_obj_type2(long loc_id, int ref_type, byte ref[], int[] obj_type)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    private synchronized static native int H5Rget_obj_type2(long loc_id, int ref_type, byte ref[],
+                                                            int[] obj_type)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
-     * Given a reference to an object ref, H5Rget_region creates a copy of the dataspace of the dataset pointed to and
-     * defines a selection in the copy which is the region pointed to.
+     * Given a reference to an object ref, H5Rget_region creates a copy of the dataspace of the dataset
+     * pointed to and defines a selection in the copy which is the region pointed to.
      *
      * @param loc_id
      *            IN: loc_id of the reference object.
@@ -11056,14 +11445,15 @@ public class H5 implements java.io.Serializable {
      * @return a valid identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - output array is null.
+     *            output array is null.
      * @exception IllegalArgumentException
-     *                - output array is invalid.
+     *            output array is invalid.
      **/
-    public static long H5Rget_region(long loc_id, int ref_type, byte[] ref) throws HDF5LibraryException,
-    NullPointerException, IllegalArgumentException {
+    public static long H5Rget_region(long loc_id, int ref_type, byte[] ref)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         long id = _H5Rget_region(loc_id, ref_type, ref);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Rget_region add {}", id);
@@ -11074,7 +11464,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Rget_region(long loc_id, int ref_type, byte[] ref)
-            throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     // ////////////////////////////////////////////////////////////
     // //
@@ -11093,9 +11483,10 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Screate(int type) throws HDF5LibraryException {
+    public static long H5Screate(int type) throws HDF5LibraryException
+    {
         long id = _H5Screate(type);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Screate add {}", id);
@@ -11120,12 +11511,13 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier
      *
      * @exception HDF5Exception
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims or maxdims is null.
+     *            dims or maxdims is null.
      **/
-    public static long H5Screate_simple(int rank, long[] dims, long[] maxdims) throws HDF5Exception,
-            NullPointerException {
+    public static long H5Screate_simple(int rank, long[] dims, long[] maxdims)
+        throws HDF5Exception, NullPointerException
+    {
         long id = _H5Screate_simple(rank, dims, maxdims);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Screate_simple add {}", id);
@@ -11136,7 +11528,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Screate_simple(int rank, long[] dims, long[] maxdims)
-            throws HDF5Exception, NullPointerException;
+        throws HDF5Exception, NullPointerException;
 
     /**
      * H5Sset_extent_simple sets or resets the size of an existing dataspace.
@@ -11153,10 +11545,11 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Sset_extent_simple(long space_id, int rank, long[] current_size,
-            long[] maximum_size) throws HDF5LibraryException, NullPointerException;
+                                                                long[] maximum_size)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sset_extent_simple sets or resets the size of an existing dataspace.
@@ -11173,14 +11566,16 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static long H5Sset_extent_simple(long space_id, int rank, byte[] current_size,
-            byte[] maximum_size) throws HDF5LibraryException, NullPointerException {
-        ByteBuffer csbb = ByteBuffer.wrap(current_size);
-        long[] lacs = (csbb.asLongBuffer()).array();
+                                                         byte[] maximum_size)
+        throws HDF5LibraryException, NullPointerException
+    {
+        ByteBuffer csbb   = ByteBuffer.wrap(current_size);
+        long[] lacs       = (csbb.asLongBuffer()).array();
         ByteBuffer maxsbb = ByteBuffer.wrap(maximum_size);
-        long[] lamaxs = (maxsbb.asLongBuffer()).array();
+        long[] lamaxs     = (maxsbb.asLongBuffer()).array();
 
         return H5Sset_extent_simple(space_id, rank, lacs, lamaxs);
     }
@@ -11193,9 +11588,10 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Scopy(long space_id) throws HDF5LibraryException {
+    public static long H5Scopy(long space_id) throws HDF5LibraryException
+    {
         long id = _H5Scopy(space_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Scopy add {}", id);
@@ -11216,9 +11612,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Sclose(long space_id) throws HDF5LibraryException {
+    public static int H5Sclose(long space_id) throws HDF5LibraryException
+    {
         if (space_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -11239,9 +11636,10 @@ public class H5 implements java.io.Serializable {
      * @return the buffer for the object to be encoded into.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native byte[] H5Sencode(long obj_id) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native byte[] H5Sencode(long obj_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sdecode reconstructs the HDF5 data space object and returns a new object handle for it.
@@ -11252,11 +11650,12 @@ public class H5 implements java.io.Serializable {
      * @return a new object handle
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native long H5Sdecode(byte[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native long H5Sdecode(byte[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sget_simple_extent_npoints determines the number of elements in a dataspace.
@@ -11266,9 +11665,10 @@ public class H5 implements java.io.Serializable {
      * @return the number of elements in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Sget_simple_extent_npoints(long space_id) throws HDF5LibraryException;
+    public synchronized static native long H5Sget_simple_extent_npoints(long space_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Sget_simple_extent_ndims determines the dimensionality (or rank) of a dataspace.
@@ -11279,13 +11679,14 @@ public class H5 implements java.io.Serializable {
      * @return the number of dimensions in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Sget_simple_extent_ndims(long space_id) throws HDF5LibraryException;
+    public synchronized static native int H5Sget_simple_extent_ndims(long space_id)
+        throws HDF5LibraryException;
 
     /**
-     * H5Sget_simple_extent_dims returns the size and maximum sizes of each dimension of a dataspace through the dims
-     * and maxdims parameters.
+     * H5Sget_simple_extent_dims returns the size and maximum sizes of each dimension of a dataspace through
+     * the dims and maxdims parameters.
      *
      * @param space_id
      *            IN: Identifier of the dataspace object to query
@@ -11297,12 +11698,13 @@ public class H5 implements java.io.Serializable {
      * @return the number of dimensions in the dataspace if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims or maxdims is null.
+     *            dims or maxdims is null.
      **/
-    public synchronized static native int H5Sget_simple_extent_dims(long space_id, long[] dims, long[] maxdims)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Sget_simple_extent_dims(long space_id, long[] dims,
+                                                                    long[] maxdims)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sis_simple determines whether a dataspace is a simple dataspace.
@@ -11313,7 +11715,7 @@ public class H5 implements java.io.Serializable {
      * @return true if is a simple dataspace
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Sis_simple(long space_id) throws HDF5LibraryException;
 
@@ -11326,9 +11728,10 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace class name if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Sget_simple_extent_type(long space_id) throws HDF5LibraryException;
+    public synchronized static native int H5Sget_simple_extent_type(long space_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Sset_extent_none removes the extent from a dataspace and sets the type to H5S_NONE.
@@ -11339,13 +11742,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Sset_extent_none(long space_id) throws HDF5LibraryException;
 
     /**
-     * H5Sextent_copy copies the extent from source_space_id to dest_space_id. This action may change the type of the
-     * dataspace.
+     * H5Sextent_copy copies the extent from source_space_id to dest_space_id. This action may change the type
+     * of the dataspace.
      *
      * @param dest_space_id
      *            IN: The identifier for the dataspace from which the extent is copied.
@@ -11355,13 +11758,14 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Sextent_copy(long dest_space_id, long source_space_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
-     * H5Sextent_equal determines whether the dataspace extents of two dataspaces, space1_id and space2_id, are equal.
+     * H5Sextent_equal determines whether the dataspace extents of two dataspaces, space1_id and space2_id,
+     * are equal.
      *
      * @param first_space_id
      *            IN: The identifier for the first dataspace.
@@ -11371,10 +11775,10 @@ public class H5 implements java.io.Serializable {
      * @return true if successful, else false
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Sextent_equal(long first_space_id, long second_space_id)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /***************** Operations on dataspace selections *****************/
 
@@ -11387,7 +11791,7 @@ public class H5 implements java.io.Serializable {
      * @return the dataspace selection type if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Sget_select_type(long space_id) throws HDF5LibraryException;
 
@@ -11400,20 +11804,24 @@ public class H5 implements java.io.Serializable {
      * @return the number of elements in the selection if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Sget_select_npoints(long space_id) throws HDF5LibraryException;
 
     /**
      * H5Sselect_copy copies all the selection information (including offset) from the source
      * dataspace to the destination dataspace.
-     * @param dst_id              ID of the destination dataspace
-     * @param src_id              ID of the source dataspace
+     *
+     * @param dst_id
+     *            ID of the destination dataspace
+     * @param src_id
+     *            ID of the source dataspace
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Sselect_copy(long dst_id, long src_id) throws HDF5LibraryException;
+    public synchronized static native void H5Sselect_copy(long dst_id, long src_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Sselect_valid verifies that the selection for the dataspace.
@@ -11424,7 +11832,7 @@ public class H5 implements java.io.Serializable {
      * @return true if the selection is contained within the extent and FALSE if it is not or is an error.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Sselect_valid(long space_id) throws HDF5LibraryException;
 
@@ -11437,18 +11845,17 @@ public class H5 implements java.io.Serializable {
      *            Offset to subtract
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - offset is null.
+     *            offset is null.
      **/
-     public synchronized static native void H5Sselect_adjust(long space_id, long[][] offset)
-             throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Sselect_adjust(long space_id, long[][] offset)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Sget_select_bounds retrieves the coordinates of the bounding box containing the current selection and places
-     * them into user-supplied buffers.
-     * 
    
-     * The start and end buffers must be large enough to hold the dataspace rank number of coordinates.
+     * H5Sget_select_bounds retrieves the coordinates of the bounding box containing the current selection and
+     * places them into user-supplied buffers. 
     The start and end buffers must be large enough to hold the
+     * dataspace rank number of coordinates.
      *
      * @param space_id
      *            Identifier of dataspace to release.
@@ -11460,50 +11867,54 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful,with start and end initialized.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - start or end is null.
+     *            start or end is null.
      **/
     public synchronized static native int H5Sget_select_bounds(long space_id, long[] start, long[] end)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sselect_shape_same checks to see if the current selection in the dataspaces are the same
      * dimensionality and shape.
      * This is primarily used for reading the entire selection in one swoop.
      *
-     * @param   space1_id         ID of 1st Dataspace pointer to compare
-     * @param   space2_id         ID of 2nd Dataspace pointer to compare
+     * @param space1_id
+     *            ID of 1st Dataspace pointer to compare
+     * @param space2_id
+     *            ID of 2nd Dataspace pointer to compare
      *
      * @return true if the selection is the same dimensionality and shape;
      *         false otherwise
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native boolean H5Sselect_shape_same(long space1_id, long space2_id) throws HDF5LibraryException;
+    public synchronized static native boolean H5Sselect_shape_same(long space1_id, long space2_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Sselect_intersect_block checks to see if the current selection in the
      * dataspace intersects with the block given.
      *
      * @param space_id
-     *             ID of dataspace pointer to compare
+     *            ID of dataspace pointer to compare
      * @param start
-     *             Starting coordinate of block
+     *            Starting coordinate of block
      * @param end
-     *             Opposite ("ending") coordinate of block
+     *            Opposite ("ending") coordinate of block
      *
      * @return a TRUE  if the current selection in the dataspace intersects with the block given
      *           FALSE otherwise
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - offset is null.
+     *            offset is null.
      **/
-     public synchronized static native boolean H5Sselect_intersect_block(long space_id, long[] start, long[] end)
-             throws HDF5LibraryException, NullPointerException;
+    public synchronized static native boolean H5Sselect_intersect_block(long space_id, long[] start,
+                                                                        long[] end)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Soffset_simple sets the offset of a simple dataspace space_id.
@@ -11516,12 +11927,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - offset array is null.
+     *            offset array is null.
      **/
-    public synchronized static native int H5Soffset_simple(long space_id, byte[] offset) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native int H5Soffset_simple(long space_id, byte[] offset)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Soffset_simple sets the offset of a simple dataspace space_id.
@@ -11534,22 +11945,22 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - offset array is null.
+     *            offset array is null.
      **/
-    public synchronized static int H5Soffset_simple(long space_id, long[] offset) throws HDF5Exception,
-            NullPointerException {
-        if (offset == null) {
+    public synchronized static int H5Soffset_simple(long space_id, long[] offset)
+        throws HDF5Exception, NullPointerException
+    {
+        if (offset == null)
             return -1;
-        }
 
         HDFArray theArray = new HDFArray(offset);
-        byte[] theArr = theArray.byteify();
+        byte[] theArr     = theArray.byteify();
 
         int retVal = H5Soffset_simple(space_id, theArr);
 
-        theArr = null;
+        theArr   = null;
         theArray = null;
         return retVal;
     }
@@ -11563,7 +11974,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Sselect_all(long space_id) throws HDF5LibraryException;
 
@@ -11575,7 +11986,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Sselect_none(long space_id) throws HDF5LibraryException;
 
@@ -11594,10 +12005,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    private synchronized static native int H5Sselect_elements(long space_id, int op, int num_elements, byte[] coord)
-            throws HDF5LibraryException, NullPointerException;
+    private synchronized static native int H5Sselect_elements(long space_id, int op, int num_elements,
+                                                              byte[] coord)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sselect_elements selects array elements to be included in the selection for the space_id dataspace.
@@ -11614,24 +12026,25 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5Exception
-     *                - Error in the data conversion
+     *            Error in the data conversion
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - cord array is
+     *            cord array is
      **/
-    public synchronized static int H5Sselect_elements(long space_id, int op, int num_elements, long[][] coord2D)
-            throws HDF5Exception, HDF5LibraryException, NullPointerException {
-        if (coord2D == null) {
+    public synchronized static int H5Sselect_elements(long space_id, int op, int num_elements,
+                                                      long[][] coord2D)
+        throws HDF5Exception, HDF5LibraryException, NullPointerException
+    {
+        if (coord2D == null)
             return -1;
-        }
 
         HDFArray theArray = new HDFArray(coord2D);
-        byte[] coord = theArray.byteify();
+        byte[] coord      = theArray.byteify();
 
         int retVal = H5Sselect_elements(space_id, op, num_elements, coord);
 
-        coord = null;
+        coord    = null;
         theArray = null;
         return retVal;
     }
@@ -11645,14 +12058,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Sget_select_elem_npoints(long spaceid) throws HDF5LibraryException;
+    public synchronized static native long H5Sget_select_elem_npoints(long spaceid)
+        throws HDF5LibraryException;
 
     /**
-     * H5Sget_select_elem_pointlist returns an array of of element points in the current dataspace selection. The point
-     * coordinates have the same dimensionality (rank) as the dataspace they are located within, one coordinate per
-     * point.
+     * H5Sget_select_elem_pointlist returns an array of of element points in the current dataspace selection.
+     * The point coordinates have the same dimensionality (rank) as the dataspace they are located within, one
+     * coordinate per point.
      *
      * @param spaceid
      *            Identifier of dataspace to release.
@@ -11666,16 +12080,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native int H5Sget_select_elem_pointlist(long spaceid, long startpoint, long numpoints,
-            long[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Sget_select_elem_pointlist(long spaceid, long startpoint,
+                                                                       long numpoints, long[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace specified
-     * by space_id. The start, stride, count, and block arrays must be the same size as the rank of the dataspace.
+     * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace
+     * specified by space_id. The start, stride, count, and block arrays must be the same size as the rank of
+     * the dataspace.
      *
      * @param space_id
      *            IN: Identifier of dataspace selection to modify
@@ -11693,29 +12109,32 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
     public synchronized static int H5Sselect_hyperslab(long space_id, int op, byte[] start, byte[] stride,
-            byte[] count, byte[] block) throws HDF5LibraryException, NullPointerException, IllegalArgumentException {
-        ByteBuffer startbb = ByteBuffer.wrap(start);
-        long[] lastart = (startbb.asLongBuffer()).array();
+                                                       byte[] count, byte[] block)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
+        ByteBuffer startbb  = ByteBuffer.wrap(start);
+        long[] lastart      = (startbb.asLongBuffer()).array();
         ByteBuffer stridebb = ByteBuffer.wrap(stride);
-        long[] lastride = (stridebb.asLongBuffer()).array();
-        ByteBuffer countbb = ByteBuffer.wrap(count);
-        long[] lacount = (countbb.asLongBuffer()).array();
-        ByteBuffer blockbb = ByteBuffer.wrap(block);
-        long[] lablock = (blockbb.asLongBuffer()).array();
+        long[] lastride     = (stridebb.asLongBuffer()).array();
+        ByteBuffer countbb  = ByteBuffer.wrap(count);
+        long[] lacount      = (countbb.asLongBuffer()).array();
+        ByteBuffer blockbb  = ByteBuffer.wrap(block);
+        long[] lablock      = (blockbb.asLongBuffer()).array();
 
         return H5Sselect_hyperslab(space_id, op, lastart, lastride, lacount, lablock);
     }
 
     /**
-     * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace specified
-     * by space_id. The start, stride, count, and block arrays must be the same size as the rank of the dataspace.
+     * H5Sselect_hyperslab selects a hyperslab region to add to the current selected region for the dataspace
+     * specified by space_id. The start, stride, count, and block arrays must be the same size as the rank of
+     * the dataspace.
      *
      * @param space_id
      *            IN: Identifier of dataspace selection to modify
@@ -11733,15 +12152,15 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
-    public synchronized static native int H5Sselect_hyperslab(long space_id, int op, long[] start, long[] stride,
-            long[] count, long[] block) throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
-
+    public synchronized static native int H5Sselect_hyperslab(long space_id, int op, long[] start,
+                                                              long[] stride, long[] count, long[] block)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Scombine_hyperslab combines a hyperslab selection with the current selection for a dataspace,
@@ -11767,14 +12186,15 @@ public class H5 implements java.io.Serializable {
      * @return a dataspace ID on success / H5I_INVALID_HID on failure
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an input array is null.
+     *            an input array is null.
      * @exception IllegalArgumentException
-     *                - an input array is invalid.
+     *            an input array is invalid.
      **/
-    public synchronized static native long H5Scombine_hyperslab(long space_id, int op, long[] start, long[] stride,
-            long[] count, long[] block) throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    public synchronized static native long H5Scombine_hyperslab(long space_id, int op, long[] start,
+                                                                long[] stride, long[] count, long[] block)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Smodify_select refine an existing hyperslab selection with an operation, using a second
@@ -11782,16 +12202,17 @@ public class H5 implements java.io.Serializable {
      * space1 operated on by space2.
      *
      * @param space1_id
-     *               ID of the destination dataspace
+     *            ID of the destination dataspace
      * @param op
-     *               Operation to perform on current selection.
+     *            Operation to perform on current selection.
      * @param space2_id
-     *               ID of the source dataspace
+     *            ID of the source dataspace
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Smodify_select(long space1_id, int op, long space2_id) throws HDF5LibraryException;
+    public synchronized static native void H5Smodify_select(long space1_id, int op, long space2_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Scombine_select combines two existing hyperslab selections with an operation, returning
@@ -11799,18 +12220,19 @@ public class H5 implements java.io.Serializable {
      * space1 is copied for the dataspace extent of the newly created dataspace.
      *
      * @param space1_id
-     *               ID of the first dataspace
+     *            ID of the first dataspace
      * @param op
-     *               Operation to perform on current selection.
+     *            Operation to perform on current selection.
      * @param space2_id
-     *               ID of the second dataspace
+     *            ID of the second dataspace
      *
      * @return a dataspace ID on success / H5I_INVALID_HID on failure
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Scombine_select(long space1_id, int op, long space2_id) throws HDF5LibraryException;
+    public synchronized static native long H5Scombine_select(long space1_id, int op, long space2_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Sis_regular_hyperslab retrieves a regular hyperslab selection for the dataspace specified
@@ -11822,50 +12244,56 @@ public class H5 implements java.io.Serializable {
      * @return a TRUE/FALSE for hyperslab selection if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-     public synchronized static native boolean H5Sis_regular_hyperslab(long space_id) throws HDF5LibraryException;
+    public synchronized static native boolean H5Sis_regular_hyperslab(long space_id)
+        throws HDF5LibraryException;
 
     /**
      * H5Sget_regular_hyperslab determines if a hyperslab selection is regular for the dataspace specified
-     * by space_id. The start, stride, count, and block arrays must be the same size as the rank of the dataspace.
+     * by space_id. The start, stride, count, and block arrays must be the same size as the rank of the
+     * dataspace.
      *
      * @param space_id
      *            IN: Identifier of dataspace selection to modify
      * @param start
-     *           OUT: Offset of start of hyperslab
+     *            OUT: Offset of start of hyperslab
      * @param stride
-     *           OUT: Hyperslab stride.
+     *            OUT: Hyperslab stride.
      * @param count
-     *           OUT: Number of blocks included in hyperslab.
+     *            OUT: Number of blocks included in hyperslab.
      * @param block
-     *           OUT: Size of block in hyperslab.
+     *            OUT: Size of block in hyperslab.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - an output array is null.
+     *            an output array is null.
      * @exception IllegalArgumentException
-     *                - an output array is invalid.
+     *            an output array is invalid.
      **/
-     public synchronized static native void H5Sget_regular_hyperslab(long space_id, long[] start, long[] stride, long[] count, long[] block) throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
+    public synchronized static native void H5Sget_regular_hyperslab(long space_id, long[] start,
+                                                                    long[] stride, long[] count, long[] block)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
-     /**
-      * H5Sget_select_hyper_nblocks returns the number of hyperslab blocks in the current dataspace selection.
-      *
-      * @param spaceid
-      *            Identifier of dataspace to release.
-      *
-      * @return a non-negative value if successful
-      *
-      * @exception HDF5LibraryException
-      *                - Error from the HDF-5 Library.
-      **/
-     public synchronized static native long H5Sget_select_hyper_nblocks(long spaceid) throws HDF5LibraryException;
+    /**
+     * H5Sget_select_hyper_nblocks returns the number of hyperslab blocks in the current dataspace selection.
+     *
+     * @param spaceid
+     *            Identifier of dataspace to release.
+     *
+     * @return a non-negative value if successful
+     *
+     * @exception HDF5LibraryException
+     *            Error from the HDF-5 Library.
+     **/
+    public synchronized static native long H5Sget_select_hyper_nblocks(long spaceid)
+        throws HDF5LibraryException;
 
     /**
      * H5Sget_select_hyper_blocklist returns an array of hyperslab blocks. The block coordinates have the same
-     * dimensionality (rank) as the dataspace they are located within. The list of blocks is formatted as follows:
+     * dimensionality (rank) as the dataspace they are located within. The list of blocks is formatted as
+     * follows:
      *
      * 
          *    <"start" coordinate>, immediately followed by
@@ -11882,17 +12310,19 @@ public class H5 implements java.io.Serializable {
      * @param numblocks
      *            number of blocks to retrieve
      * @param buf
-     *            returns blocks startblock to startblock+num-1, each block is rank * 2 (corners) longs.
+     *            returns blocks startblock to startblock+num-1, each block is rank * 2 (corners)
+     *            longs.
      *
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native int H5Sget_select_hyper_blocklist(long spaceid, long startblock, long numblocks,
-            long[] buf) throws HDF5LibraryException, NullPointerException;
+    public synchronized static native int H5Sget_select_hyper_blocklist(long spaceid, long startblock,
+                                                                        long numblocks, long[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Sselect_project_intersection projects the intersection of the selections of src_space_id and
@@ -11904,30 +12334,30 @@ public class H5 implements java.io.Serializable {
      * @param dst_space_id
      *          Selection that is mapped to src_space_id
      * @param src_intersect_space_id
-     *          Selection whose intersection with src_space_id is projected to dst_space_id to obtain the result
+     *          Selection whose intersection with src_space_id is projected to dst_space_id to obtain the
+     *          result
      *
      * @return a dataspace with a selection equal to the intersection of
      *         src_intersect_space_id and src_space_id projected from src_space to dst_space on success
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5Sselect_project_intersection(long src_space_id, long dst_space_id,
-            long src_intersect_space_id) throws HDF5LibraryException;
-
-
-     // /////// unimplemented ////////
-     ///// Operations on dataspace selections /////
-
-     //
-     ///// Operations on dataspace selection iterators /////
-     //public synchronized static native     H5Ssel_iter_create(hid_t spaceid, size_t elmt_size, unsigned flags);
-     //public synchronized static native    H5Ssel_iter_get_seq_list(hid_t sel_iter_id, size_t maxseq, size_t maxbytes, size_t *nseq,
-     //                                       size_t *nbytes, hsize_t *off, size_t *len);
-     //public synchronized static native    H5Ssel_iter_reset(hid_t sel_iter_id, hid_t space_id);
-     //public synchronized static native    H5Ssel_iter_close(hid_t sel_iter_id);
+    public synchronized static native long
+    H5Sselect_project_intersection(long src_space_id, long dst_space_id, long src_intersect_space_id)
+        throws HDF5LibraryException;
 
+    // /////// unimplemented ////////
+    ///// Operations on dataspace selections /////
 
+    //
+    ///// Operations on dataspace selection iterators /////
+    // public synchronized static native     H5Ssel_iter_create(hid_t spaceid, size_t elmt_size, unsigned
+    // flags); public synchronized static native    H5Ssel_iter_get_seq_list(hid_t sel_iter_id, size_t maxseq,
+    // size_t maxbytes, size_t *nseq,
+    //                                        size_t *nbytes, hsize_t *off, size_t *len);
+    // public synchronized static native    H5Ssel_iter_reset(hid_t sel_iter_id, hid_t space_id);
+    // public synchronized static native    H5Ssel_iter_close(hid_t sel_iter_id);
 
     // ////////////////////////////////////////////////////////////
     // //
@@ -11948,12 +12378,13 @@ public class H5 implements java.io.Serializable {
      * @return a valid datatype identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dim is null.
+     *            dim is null.
      **/
-    public static long H5Tarray_create(long base_id, int ndims, long[] dim) throws HDF5LibraryException,
-            NullPointerException {
+    public static long H5Tarray_create(long base_id, int ndims, long[] dim)
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Tarray_create2(base_id, ndims, dim);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tarray_create add {}", id);
@@ -11964,7 +12395,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Tarray_create2(long base_id, int ndims, long[] dim)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tclose releases a datatype.
@@ -11975,9 +12406,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Tclose(long type_id) throws HDF5LibraryException {
+    public static int H5Tclose(long type_id) throws HDF5LibraryException
+    {
         if (type_id < 0)
             return 0; // throw new HDF5LibraryException("Negative ID");;
 
@@ -12006,16 +12438,17 @@ public class H5 implements java.io.Serializable {
      *            IN: Datatype access property list.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native void H5Tcommit(long loc_id, String name, long type_id, long lcpl_id,
-            long tcpl_id, long tapl_id) throws HDF5LibraryException, NullPointerException;
+                                                     long tcpl_id, long tapl_id)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Tcommit_anon commits a transient datatype (not immutable) to a file, turning it into a named datatype with the
-     * specified creation and property lists.
+     * H5Tcommit_anon commits a transient datatype (not immutable) to a file, turning it into a named datatype
+     * with the specified creation and property lists.
      *
      * @param loc_id
      *            IN: Location identifier.
@@ -12027,14 +12460,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Datatype access property list.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Tcommit_anon(long loc_id, long type_id, long tcpl_id, long tapl_id)
-            throws HDF5LibraryException;
+    public synchronized static native void H5Tcommit_anon(long loc_id, long type_id, long tcpl_id,
+                                                          long tapl_id) throws HDF5LibraryException;
 
     /**
-     * H5Tcommitted queries a type to determine whether the type specified by the type identifier is a named type or a
-     * transient type.
+     * H5Tcommitted queries a type to determine whether the type specified by the type identifier is a named
+     * type or a transient type.
      *
      * @param type_id
      *            IN: Identifier of datatype.
@@ -12042,13 +12475,13 @@ public class H5 implements java.io.Serializable {
      * @return true the datatype has been committed
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Tcommitted(long type_id) throws HDF5LibraryException;
 
     /**
-     * H5Tcompiler_conv finds out whether the library's conversion function from type src_id to type dst_id is a
-     * compiler (hard) conversion.
+     * H5Tcompiler_conv finds out whether the library's conversion function from type src_id to type dst_id is
+     * a compiler (hard) conversion.
      *
      * @param src_id
      *            IN: Identifier of source datatype.
@@ -12056,9 +12489,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of destination datatype.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Tcompiler_conv(long src_id, long dst_id) throws HDF5LibraryException;
+    public synchronized static native void H5Tcompiler_conv(long src_id, long dst_id)
+        throws HDF5LibraryException;
 
     /**
      ** H5Tconvert converts nelmts elements from the type specified by the src_id identifier to type dst_id.
@@ -12077,12 +12511,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Dataset transfer property list identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
     public synchronized static native void H5Tconvert(long src_id, long dst_id, long nelmts, byte[] buf,
-            byte[] background, long plist_id) throws HDF5LibraryException, NullPointerException;
+                                                      byte[] background, long plist_id)
+        throws HDF5LibraryException, NullPointerException;
 
     // int H5Tconvert(int src_id, int dst_id, long nelmts, Pointer buf, Pointer background, int plist_id);
 
@@ -12090,15 +12525,16 @@ public class H5 implements java.io.Serializable {
      * H5Tcopy copies an existing datatype. The returned type is always transient and unlocked.
      *
      * @param type_id
-     *            IN: Identifier of datatype to copy. Can be a datatype identifier, a predefined datatype (defined in
-     *            H5Tpublic.h), or a dataset Identifier.
+     *            IN: Identifier of datatype to copy. Can be a datatype identifier, a predefined datatype
+     *                (defined in H5Tpublic.h), or a dataset Identifier.
      *
      * @return a datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tcopy(long type_id) throws HDF5LibraryException {
+    public static long H5Tcopy(long type_id) throws HDF5LibraryException
+    {
         long id = _H5Tcopy(type_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tcopy add {}", id);
@@ -12121,9 +12557,10 @@ public class H5 implements java.io.Serializable {
      * @return datatype identifier
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tcreate(int tclass, long size) throws HDF5LibraryException {
+    public static long H5Tcreate(int tclass, long size) throws HDF5LibraryException
+    {
         long id = _H5Tcreate(tclass, size);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tcreate add {}", id);
@@ -12144,11 +12581,12 @@ public class H5 implements java.io.Serializable {
      * @return a new object handle
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public static long H5Tdecode(byte[] buf) throws HDF5LibraryException, NullPointerException {
+    public static long H5Tdecode(byte[] buf) throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Tdecode(buf);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tdecode add {}", id);
@@ -12158,11 +12596,12 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Tdecode(byte[] buf) throws HDF5LibraryException, NullPointerException;
+    private synchronized static native long _H5Tdecode(byte[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Tdetect_class determines whether the datatype specified in dtype_id contains any datatypes of the datatype
-     * class specified in dtype_class.
+     * H5Tdetect_class determines whether the datatype specified in dtype_id contains any datatypes of the
+     * datatype class specified in dtype_class.
      *
      * @param type_id
      *            IN: Identifier of datatype to query.
@@ -12172,9 +12611,10 @@ public class H5 implements java.io.Serializable {
      * @return true if the datatype specified in dtype_id contains any datatypes of the datatype class
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native boolean H5Tdetect_class(long type_id, int cls) throws HDF5LibraryException;
+    public synchronized static native boolean H5Tdetect_class(long type_id, int cls)
+        throws HDF5LibraryException;
 
     /**
      * H5Tencode converts a data type description into binary form in a buffer.
@@ -12182,36 +12622,38 @@ public class H5 implements java.io.Serializable {
      * @param obj_id
      *            IN: Identifier of the object to be encoded.
      * @param buf
-     *            OUT: Buffer for the object to be encoded into. If the provided buffer is NULL, only the size of buffer
-     *            needed is returned.
+     *            OUT: Buffer for the object to be encoded into. If the provided buffer is NULL, only the size
+     *                 of buffer needed is returned.
      * @param nalloc
      *            IN: The size of the allocated buffer.
      *
      * @return the size needed for the allocated buffer.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native int H5Tencode(long obj_id, byte[] buf, long nalloc) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native int H5Tencode(long obj_id, byte[] buf, long nalloc)
+        throws HDF5LibraryException, NullPointerException;
 
     // /**
-    // * H5Tencode converts a data type description into binary form in a buffer.
-    // *
-    // * @param obj_id IN: Identifier of the object to be encoded.
-    // *
-    // * @return the buffer for the object to be encoded into.
-    // *
-    // * @exception HDF5LibraryException - Error from the HDF-5 Library.
-    // **/
+    //  * H5Tencode converts a data type description into binary form in a buffer.
+    //  *
+    //  * @param obj_id
+    //  *            IN: Identifier of the object to be encoded.
+    //  *
+    //  * @return the buffer for the object to be encoded into.
+    //  *
+    //  * @exception HDF5LibraryException
+    //  *            Error from the HDF-5 Library.
+    //  **/
     // public synchronized static native byte[] H5Tencode(int obj_id)
     // throws HDF5LibraryException;
 
     /**
-     * H5Tenum_create creates a new enumeration datatype based on the specified base datatype, parent_id, which must be
-     * an integer type.
+     * H5Tenum_create creates a new enumeration datatype based on the specified base datatype, parent_id,
+     * which must be an integer type.
      *
      * @param base_id
      *            IN: Identifier of the parent datatype to release.
@@ -12219,9 +12661,10 @@ public class H5 implements java.io.Serializable {
      * @return the datatype identifier for the new enumeration datatype
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tenum_create(long base_id) throws HDF5LibraryException {
+    public static long H5Tenum_create(long base_id) throws HDF5LibraryException
+    {
         long id = _H5Tenum_create(base_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tenum_create add {}", id);
@@ -12244,12 +12687,12 @@ public class H5 implements java.io.Serializable {
      *            IN: The value of the member, data of the correct type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native void H5Tenum_insert(long type, String name, byte[] value)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tenum_insert inserts a new enumeration datatype member into an enumeration datatype.
@@ -12264,12 +12707,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static int H5Tenum_insert(long type, String name, int[] value) throws HDF5LibraryException,
-            NullPointerException {
+    public static int H5Tenum_insert(long type, String name, int[] value)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Tenum_insert_int(type, name, value);
     }
 
@@ -12286,21 +12730,23 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static int H5Tenum_insert(long type, String name, int value) throws HDF5LibraryException,
-            NullPointerException {
-        int[] val = { value };
+    public static int H5Tenum_insert(long type, String name, int value)
+        throws HDF5LibraryException, NullPointerException
+    {
+        int[] val = {value};
         return H5Tenum_insert_int(type, name, val);
     }
 
     private synchronized static native int H5Tenum_insert_int(long type, String name, int[] value)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration datatype type.
+     * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration
+     * datatype type.
      *
      * @param type
      *            IN: Identifier of datatype.
@@ -12312,17 +12758,18 @@ public class H5 implements java.io.Serializable {
      * @return the symbol name.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - value is null.
+     *            value is null.
      **/
     public synchronized static native String H5Tenum_nameof(long type, byte[] value, long size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     // int H5Tenum_nameof(int type, Pointer value, Buffer name/* out */, long size);
 
     /**
-     * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration datatype type.
+     * H5Tenum_nameof finds the symbol name that corresponds to the specified value of the enumeration
+     * datatype type.
      *
      * @param type
      *            IN: Identifier of datatype.
@@ -12336,20 +12783,22 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static int H5Tenum_nameof(long type, int[] value, String[] name, int size) throws HDF5LibraryException,
-            NullPointerException {
+    public static int H5Tenum_nameof(long type, int[] value, String[] name, int size)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Tenum_nameof_int(type, value, name, size);
     }
 
     private synchronized static native int H5Tenum_nameof_int(long type, int[] value, String[] name, int size)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype type.
+     * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype
+     * type.
      *
      * @param type
      *            IN: Identifier of datatype.
@@ -12359,13 +12808,14 @@ public class H5 implements java.io.Serializable {
      *            OUT: The value of the member
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Tenum_valueof(long type, String name, byte[] value)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype type.
+     * H5Tenum_valueof finds the value that corresponds to the specified name of the enumeration datatype
+     * type.
      *
      * @param type
      *            IN: Identifier of datatype.
@@ -12377,17 +12827,18 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static int H5Tenum_valueof(long type, String name, int[] value) throws HDF5LibraryException,
-            NullPointerException {
+    public static int H5Tenum_valueof(long type, String name, int[] value)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Tenum_valueof_int(type, name, value);
     }
 
     private synchronized static native int H5Tenum_valueof_int(long type, String name, int[] value)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tequal determines whether two datatype identifiers refer to the same datatype.
@@ -12400,9 +12851,10 @@ public class H5 implements java.io.Serializable {
      * @return true if the datatype identifiers refer to the same datatype, else false.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native boolean H5Tequal(long type_id1, long type_id2) throws HDF5LibraryException;
+    public synchronized static native boolean H5Tequal(long type_id1, long type_id2)
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_array_dims returns the sizes of the dimensions of the specified array datatype object.
@@ -12415,11 +12867,13 @@ public class H5 implements java.io.Serializable {
      * @return the non-negative number of dimensions of the array type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims is null.
+     *            dims is null.
      **/
-    public static int H5Tget_array_dims(long type_id, long[] dims) throws HDF5LibraryException, NullPointerException {
+    public static int H5Tget_array_dims(long type_id, long[] dims)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Tget_array_dims2(type_id, dims);
     }
 
@@ -12434,12 +12888,12 @@ public class H5 implements java.io.Serializable {
      * @return the non-negative number of dimensions of the array type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - dims is null.
+     *            dims is null.
      **/
-    public synchronized static native int H5Tget_array_dims2(long type_id, long[] dims) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native int H5Tget_array_dims2(long type_id, long[] dims)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tget_array_ndims returns the rank, the number of dimensions, of an array datatype object.
@@ -12450,7 +12904,7 @@ public class H5 implements java.io.Serializable {
      * @return the rank of the array
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_array_ndims(long type_id) throws HDF5LibraryException;
 
@@ -12463,7 +12917,7 @@ public class H5 implements java.io.Serializable {
      * @return datatype class identifier if successful; otherwise H5T_NO_CLASS(-1).
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_class(long type_id) throws HDF5LibraryException;
 
@@ -12476,7 +12930,8 @@ public class H5 implements java.io.Serializable {
      * @return class name if successful; otherwise H5T_NO_CLASS.
      *
      **/
-    public static String H5Tget_class_name(long class_id) {
+    public static String H5Tget_class_name(long class_id)
+    {
         String retValue = null;
         if (HDF5Constants.H5T_INTEGER == class_id) /* integer types */
             retValue = "H5T_INTEGER";
@@ -12492,7 +12947,7 @@ public class H5 implements java.io.Serializable {
             retValue = "H5T_OPAQUE";
         else if (HDF5Constants.H5T_COMPOUND == class_id) /* compound types */
             retValue = "H5T_COMPOUND";
-        else if (HDF5Constants.H5T_REFERENCE == class_id)/* reference types */
+        else if (HDF5Constants.H5T_REFERENCE == class_id) /* reference types */
             retValue = "H5T_REFERENCE";
         else if (HDF5Constants.H5T_ENUM == class_id) /* enumeration types */
             retValue = "H5T_ENUM";
@@ -12507,8 +12962,8 @@ public class H5 implements java.io.Serializable {
     }
 
     /**
-     * H5Tget_create_plist returns a property list identifier for the datatype creation property list associated with
-     * the datatype specified by type_id.
+     * H5Tget_create_plist returns a property list identifier for the datatype creation property list
+     * associated with the datatype specified by type_id.
      *
      * @param type_id
      *            IN: Identifier of datatype.
@@ -12516,9 +12971,10 @@ public class H5 implements java.io.Serializable {
      * @return a datatype property list identifier.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tget_create_plist(long type_id) throws HDF5LibraryException {
+    public static long H5Tget_create_plist(long type_id) throws HDF5LibraryException
+    {
         long id = _H5Tget_create_plist(type_id);
         if (id > 0) {
             log.trace("OPEN_IDS: _H5Tget_create_plist add {}", id);
@@ -12539,7 +12995,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid character set type if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_cset(long type_id) throws HDF5LibraryException;
 
@@ -12554,7 +13010,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_cset(long type_id, int cset) throws HDF5LibraryException;
 
@@ -12567,7 +13023,7 @@ public class H5 implements java.io.Serializable {
      * @return the bias if successful; otherwise 0.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_ebias(long type_id) throws HDF5LibraryException;
 
@@ -12582,10 +13038,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Tset_ebias(long type_id, int ebias) throws HDF5LibraryException {
-        H5Tset_ebias(type_id, (long) ebias);
+    public static int H5Tset_ebias(long type_id, int ebias) throws HDF5LibraryException
+    {
+        H5Tset_ebias(type_id, (long)ebias);
         return 0;
     }
 
@@ -12598,7 +13055,7 @@ public class H5 implements java.io.Serializable {
      * @return the bias
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Tget_ebias_long(long type_id) throws HDF5LibraryException;
 
@@ -12611,12 +13068,13 @@ public class H5 implements java.io.Serializable {
      *            IN: Exponent bias value.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Tset_ebias(long type_id, long ebias) throws HDF5LibraryException;
 
     /**
-     * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point datatype.
+     * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point
+     * datatype.
      *
      * @param type_id
      *            IN: Identifier of datatype to query.
@@ -12631,17 +13089,18 @@ public class H5 implements java.io.Serializable {
      *            
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - fields is null.
+     *            fields is null.
      * @exception IllegalArgumentException
-     *                - fields array is invalid.
+     *            fields array is invalid.
      **/
-    public synchronized static native void H5Tget_fields(long type_id, long[] fields) throws HDF5LibraryException,
-            NullPointerException, IllegalArgumentException;
+    public synchronized static native void H5Tget_fields(long type_id, long[] fields)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
-     * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point datatype.
+     * H5Tget_fields retrieves information about the locations of the various bit fields of a floating point
+     * datatype.
      *
      * @param type_id
      *            IN: Identifier of datatype to query.
@@ -12659,19 +13118,20 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - fields is null.
+     *            fields is null.
      * @exception IllegalArgumentException
-     *                - fields array is invalid.
+     *            fields array is invalid.
      **/
-    public static int H5Tget_fields(long type_id, int[] fields) throws HDF5LibraryException, NullPointerException,
-            IllegalArgumentException {
+    public static int H5Tget_fields(long type_id, int[] fields)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException
+    {
         return H5Tget_fields_int(type_id, fields);
     }
 
-    private synchronized static native int H5Tget_fields_int(long type_id, int[] fields) throws HDF5LibraryException,
-            NullPointerException, IllegalArgumentException;
+    private synchronized static native int H5Tget_fields_int(long type_id, int[] fields)
+        throws HDF5LibraryException, NullPointerException, IllegalArgumentException;
 
     /**
      * H5Tset_fields sets the locations and sizes of the various floating point bit fields.
@@ -12690,10 +13150,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Size of mantissa in bits.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Tset_fields(long type_id, long spos, long epos, long esize, long mpos,
-            long msize) throws HDF5LibraryException;
+    public synchronized static native void H5Tset_fields(long type_id, long spos, long epos, long esize,
+                                                         long mpos, long msize) throws HDF5LibraryException;
 
     /**
      * H5Tset_fields sets the locations and sizes of the various floating point bit fields.
@@ -12714,11 +13174,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public static int H5Tset_fields(long type_id, int spos, int epos, int esize, int mpos, int msize)
-            throws HDF5LibraryException {
-        H5Tset_fields(type_id, (long) spos, (long) epos, (long) esize, (long) mpos, (long) msize);
+        throws HDF5LibraryException
+    {
+        H5Tset_fields(type_id, (long)spos, (long)epos, (long)esize, (long)mpos, (long)msize);
         return 0;
     }
 
@@ -12731,14 +13192,14 @@ public class H5 implements java.io.Serializable {
      * @return a valid padding type if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_inpad(long type_id) throws HDF5LibraryException;
 
     /**
-     * If any internal bits of a floating point type are unused (that is, those significant bits which are not part of
-     * the sign, exponent, or mantissa), then H5Tset_inpad will be filled according to the value of the padding value
-     * property inpad.
+     * If any internal bits of a floating point type are unused (that is, those significant bits which are not
+     * part of the sign, exponent, or mantissa), then H5Tset_inpad will be filled according to the value of
+     * the padding value property inpad.
      *
      * @param type_id
      *            IN: Identifier of datatype to modify.
@@ -12748,7 +13209,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_inpad(long type_id, int inpad) throws HDF5LibraryException;
 
@@ -12763,9 +13224,10 @@ public class H5 implements java.io.Serializable {
      * @return the class of the datatype of the field if successful;
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Tget_member_class(long type_id, int membno) throws HDF5LibraryException;
+    public synchronized static native int H5Tget_member_class(long type_id, int membno)
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_member_index retrieves the index of a field of a compound datatype.
@@ -12778,12 +13240,14 @@ public class H5 implements java.io.Serializable {
      * @return if field is defined, the index; else negative.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Tget_member_index(long type_id, String field_name) throws HDF5LibraryException;
+    public synchronized static native int H5Tget_member_index(long type_id, String field_name)
+        throws HDF5LibraryException;
 
     /**
-     * H5Tget_member_name retrieves the name of a field of a compound datatype or an element of an enumeration datatype.
+     * H5Tget_member_name retrieves the name of a field of a compound datatype or an element of an enumeration
+     * datatype.
      *
      * @param type_id
      *            IN: Identifier of datatype to query.
@@ -12793,13 +13257,15 @@ public class H5 implements java.io.Serializable {
      * @return a valid pointer to the name if successful; otherwise null.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native String H5Tget_member_name(long type_id, int field_idx) throws HDF5LibraryException;
+    public synchronized static native String H5Tget_member_name(long type_id, int field_idx)
+        throws HDF5LibraryException;
 
     /**
-     * H5Tget_member_offset returns the byte offset of the specified member of the compound datatype. This is the byte
-     * offset in the HDF-5 file/library, NOT the offset of any Java object which might be mapped to this data item.
+     * H5Tget_member_offset returns the byte offset of the specified member of the compound datatype. This is
+     * the byte offset in the HDF-5 file/library, NOT the offset of any Java object which might be mapped to
+     * this data item.
      *
      * @param type_id
      *            IN: Identifier of datatype to query.
@@ -12821,9 +13287,10 @@ public class H5 implements java.io.Serializable {
      * @return the identifier of a copy of the datatype of the field if successful;
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tget_member_type(long type_id, int field_idx) throws HDF5LibraryException {
+    public static long H5Tget_member_type(long type_id, int field_idx) throws HDF5LibraryException
+    {
         long id = _H5Tget_member_type(type_id, field_idx);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tget_member_type add {}", id);
@@ -12834,7 +13301,7 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Tget_member_type(long type_id, int field_idx)
-            throws HDF5LibraryException;
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_member_value returns the value of the enumeration datatype member memb_no.
@@ -12847,12 +13314,12 @@ public class H5 implements java.io.Serializable {
      *            OUT: The value of the member
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - value is null.
+     *            value is null.
      **/
     public synchronized static native void H5Tget_member_value(long type_id, int membno, byte[] value)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tget_member_value returns the value of the enumeration datatype member memb_no.
@@ -12867,30 +13334,33 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - value is null.
+     *            value is null.
      **/
-    public static int H5Tget_member_value(long type_id, int membno, int[] value) throws HDF5LibraryException,
-            NullPointerException {
+    public static int H5Tget_member_value(long type_id, int membno, int[] value)
+        throws HDF5LibraryException, NullPointerException
+    {
         return H5Tget_member_value_int(type_id, membno, value);
     }
 
     private synchronized static native int H5Tget_member_value_int(long type_id, int membno, int[] value)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tget_native_type returns the equivalent native datatype for the datatype specified in type_id.
      *
      * @param type_id
-     *            IN: Identifier of datatype to query. Direction of search is assumed to be in ascending order.
+     *            IN: Identifier of datatype to query. Direction of search is assumed to be in ascending
+     *                order.
      *
      * @return the native datatype identifier for the specified dataset datatype.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static long H5Tget_native_type(long type_id) throws HDF5LibraryException {
+    public synchronized static long H5Tget_native_type(long type_id) throws HDF5LibraryException
+    {
         return H5Tget_native_type(type_id, HDF5Constants.H5T_DIR_ASCEND);
     }
 
@@ -12905,9 +13375,10 @@ public class H5 implements java.io.Serializable {
      * @return the native datatype identifier for the specified dataset datatype.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tget_native_type(long type_id, int direction) throws HDF5LibraryException {
+    public static long H5Tget_native_type(long type_id, int direction) throws HDF5LibraryException
+    {
         long id = _H5Tget_native_type(type_id, direction);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tget_native_type add {}", id);
@@ -12917,7 +13388,8 @@ public class H5 implements java.io.Serializable {
         return id;
     }
 
-    private synchronized static native long _H5Tget_native_type(long tid, int direction) throws HDF5LibraryException;
+    private synchronized static native long _H5Tget_native_type(long tid, int direction)
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_nmembers retrieves the number of fields a compound datatype has.
@@ -12928,7 +13400,7 @@ public class H5 implements java.io.Serializable {
      * @return number of members datatype has if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_nmembers(long type_id) throws HDF5LibraryException;
 
@@ -12941,7 +13413,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid normalization type if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_norm(long type_id) throws HDF5LibraryException;
 
@@ -12956,7 +13428,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_norm(long type_id, int norm) throws HDF5LibraryException;
 
@@ -12969,7 +13441,7 @@ public class H5 implements java.io.Serializable {
      * @return a positive offset value if successful; otherwise 0.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_offset(long type_id) throws HDF5LibraryException;
 
@@ -12984,10 +13456,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Tset_offset(long type_id, int offset) throws HDF5LibraryException {
-        H5Tset_offset(type_id, (long) offset);
+    public static int H5Tset_offset(long type_id, int offset) throws HDF5LibraryException
+    {
+        H5Tset_offset(type_id, (long)offset);
         return 0;
     }
 
@@ -13000,9 +13473,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Offset of first significant bit.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Tset_offset(long type_id, long offset) throws HDF5LibraryException;
+    public synchronized static native void H5Tset_offset(long type_id, long offset)
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_order returns the byte order of an atomic datatype.
@@ -13013,7 +13487,7 @@ public class H5 implements java.io.Serializable {
      * @return a byte order constant if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_order(long type_id) throws HDF5LibraryException;
 
@@ -13028,7 +13502,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_order(long type_id, int order) throws HDF5LibraryException;
 
@@ -13048,12 +13522,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - pad is null.
+     *            pad is null.
      **/
-    public synchronized static native int H5Tget_pad(long type_id, int[] pad) throws HDF5LibraryException,
-            NullPointerException;
+    public synchronized static native int H5Tget_pad(long type_id, int[] pad)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tset_pad sets the least and most-significant bits padding types.
@@ -13068,9 +13542,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native int H5Tset_pad(long type_id, int lsb, int msb) throws HDF5LibraryException;
+    public synchronized static native int H5Tset_pad(long type_id, int lsb, int msb)
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_precision returns the precision of an atomic datatype.
@@ -13081,7 +13556,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of significant bits if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_precision(long type_id) throws HDF5LibraryException;
 
@@ -13096,10 +13571,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static int H5Tset_precision(long type_id, int precision) throws HDF5LibraryException {
-        H5Tset_precision(type_id, (long) precision);
+    public static int H5Tset_precision(long type_id, int precision) throws HDF5LibraryException
+    {
+        H5Tset_precision(type_id, (long)precision);
         return 0;
     }
 
@@ -13112,7 +13588,7 @@ public class H5 implements java.io.Serializable {
      * @return the number of significant bits if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Tget_precision_long(long type_id) throws HDF5LibraryException;
 
@@ -13125,9 +13601,10 @@ public class H5 implements java.io.Serializable {
      *            IN: Number of bits of precision for datatype.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5Tset_precision(long type_id, long precision) throws HDF5LibraryException;
+    public synchronized static native void H5Tset_precision(long type_id, long precision)
+        throws HDF5LibraryException;
 
     /**
      * H5Tget_sign retrieves the sign type for an integer type.
@@ -13138,7 +13615,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid sign type if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_sign(long type_id) throws HDF5LibraryException;
 
@@ -13153,7 +13630,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_sign(long type_id, int sign) throws HDF5LibraryException;
 
@@ -13166,13 +13643,13 @@ public class H5 implements java.io.Serializable {
      * @return the size of the datatype in bytes
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5Tget_size(long type_id) throws HDF5LibraryException;
 
     /**
-     * H5Tset_size sets the total size in bytes, size, for an atomic datatype (this operation is not permitted on
-     * compound datatypes).
+     * H5Tset_size sets the total size in bytes, size, for an atomic datatype (this operation is not permitted
+     * on compound datatypes).
      *
      * @param type_id
      *            IN: Identifier of datatype to change size.
@@ -13182,7 +13659,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_size(long type_id, long size) throws HDF5LibraryException;
 
@@ -13195,7 +13672,7 @@ public class H5 implements java.io.Serializable {
      * @return a valid string padding type if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tget_strpad(long type_id) throws HDF5LibraryException;
 
@@ -13210,7 +13687,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_strpad(long type_id, int strpad) throws HDF5LibraryException;
 
@@ -13223,9 +13700,10 @@ public class H5 implements java.io.Serializable {
      * @return the parent type
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tget_super(long type) throws HDF5LibraryException {
+    public static long H5Tget_super(long type) throws HDF5LibraryException
+    {
         long id = _H5Tget_super(type);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tget_super add {}", id);
@@ -13246,7 +13724,7 @@ public class H5 implements java.io.Serializable {
      * @return the tag
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native String H5Tget_tag(long type) throws HDF5LibraryException;
 
@@ -13261,7 +13739,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tset_tag(long type, String tag) throws HDF5LibraryException;
 
@@ -13280,12 +13758,12 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
     public synchronized static native int H5Tinsert(long type_id, String name, long offset, long field_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tis_variable_str determines whether the datatype identified in type_id is a variable-length string.
@@ -13296,12 +13774,13 @@ public class H5 implements java.io.Serializable {
      * @return true if type_id is a variable-length string.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native boolean H5Tis_variable_str(long type_id) throws HDF5LibraryException;
 
     /**
-     * H5Tlock locks the datatype specified by the type_id identifier, making it read-only and non-destrucible.
+     * H5Tlock locks the datatype specified by the type_id identifier, making it read-only and
+     * non-destrucible.
      *
      * @param type_id
      *            IN: Identifier of datatype to lock.
@@ -13309,12 +13788,13 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tlock(long type_id) throws HDF5LibraryException;
 
     /**
-     * H5Topen opens a named datatype at the location specified by loc_id and return an identifier for the datatype.
+     * H5Topen opens a named datatype at the location specified by loc_id and return an identifier for the
+     * datatype.
      *
      * @param loc_id
      *            IN: A file, group, or datatype identifier.
@@ -13326,12 +13806,13 @@ public class H5 implements java.io.Serializable {
      * @return a named datatype identifier if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - name is null.
+     *            name is null.
      **/
-    public static long H5Topen(long loc_id, String name, long tapl_id) throws HDF5LibraryException,
-    NullPointerException {
+    public static long H5Topen(long loc_id, String name, long tapl_id)
+        throws HDF5LibraryException, NullPointerException
+    {
         long id = _H5Topen2(loc_id, name, tapl_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Topen add {}", id);
@@ -13342,14 +13823,12 @@ public class H5 implements java.io.Serializable {
     }
 
     private synchronized static native long _H5Topen2(long loc_id, String name, long tapl_id)
-            throws HDF5LibraryException, NullPointerException;
+        throws HDF5LibraryException, NullPointerException;
 
     /**
-     * H5Tpack recursively removes padding from within a compound datatype to make it more efficient (space-wise) to
-     * store that data.
-     * 
    
-     * WARNING: This call only affects the C-data, even if it succeeds, there may be no visible effect on Java
-     * objects.
+     * H5Tpack recursively removes padding from within a compound datatype to make it more efficient
+     * (space-wise) to store that data. 
     WARNING: This call only affects the C-data, even if it
+     * succeeds, there may be no visible effect on Java objects.
      *
      * @param type_id
      *            IN: Identifier of datatype to modify.
@@ -13357,7 +13836,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Tpack(long type_id) throws HDF5LibraryException;
 
@@ -13374,12 +13853,13 @@ public class H5 implements java.io.Serializable {
      *            Buffer with data to be reclaimed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      * @exception NullPointerException
-     *                - buf is null.
+     *            buf is null.
      **/
-    public synchronized static native void H5Treclaim(long type_id, long space_id, long xfer_plist_id, byte[] buf)
-            throws HDF5LibraryException, NullPointerException;
+    public synchronized static native void H5Treclaim(long type_id, long space_id, long xfer_plist_id,
+                                                      byte[] buf)
+        throws HDF5LibraryException, NullPointerException;
 
     /**
      * H5Tvlen_create creates a new variable-length (VL) dataype.
@@ -13390,9 +13870,10 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public static long H5Tvlen_create(long base_id) throws HDF5LibraryException {
+    public static long H5Tvlen_create(long base_id) throws HDF5LibraryException
+    {
         long id = _H5Tvlen_create(base_id);
         if (id > 0) {
             log.trace("OPEN_IDS: H5Tvlen_create add {}", id);
@@ -13412,7 +13893,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the committed datatype to be flushed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Tflush(long dtype_id) throws HDF5LibraryException;
 
@@ -13426,7 +13907,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the committed datatype to be refreshed.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5Trefresh(long dtype_id) throws HDF5LibraryException;
 
@@ -13438,9 +13919,8 @@ public class H5 implements java.io.Serializable {
     // H5T_conv_t func)
     // throws HDF5LibraryException, NullPointerException;
 
-    // public synchronized static native int H5Tunregister(H5T_pers_t pers, String name, int src_id, int dst_id,
-    // H5T_conv_t func)
-    // throws HDF5LibraryException, NullPointerException;
+    // public synchronized static native int H5Tunregister(H5T_pers_t pers, String name, int src_id, int
+    // dst_id, H5T_conv_t func) throws HDF5LibraryException, NullPointerException;
 
     // ////////////////////////////////////////////////////////////
     // //
@@ -13450,7 +13930,8 @@ public class H5 implements java.io.Serializable {
 
     /// VOL Connector Functionality
     /**
-     * H5VLregister_connector_by_name registers a new VOL connector as a member of the virtual object layer class.
+     * H5VLregister_connector_by_name registers a new VOL connector as a member of the virtual object layer
+     * class.
      *
      * @param connector_name
      *            IN: name of the connector.
@@ -13461,11 +13942,13 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5VLregister_connector_by_name(String connector_name, long vipl_id) throws HDF5LibraryException;
+    public synchronized static native long H5VLregister_connector_by_name(String connector_name, long vipl_id)
+        throws HDF5LibraryException;
     /**
-     * H5VLregister_connector_by_value registers a new VOL connector as a member of the virtual object layer class.
+     * H5VLregister_connector_by_value registers a new VOL connector as a member of the virtual object layer
+     * class.
      *
      * @param connector_value
      *            IN: value of the connector.
@@ -13476,9 +13959,10 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5VLregister_connector_by_value(int connector_value, long vipl_id) throws HDF5LibraryException;
+    public synchronized static native long H5VLregister_connector_by_value(int connector_value, long vipl_id)
+        throws HDF5LibraryException;
     /**
      * H5VLis_connector_registered_by_name tests whether a VOL class has been registered.
      *
@@ -13488,9 +13972,10 @@ public class H5 implements java.io.Serializable {
      * @return true if a VOL connector with that name has been registered
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native boolean H5VLis_connector_registered_by_name(String name) throws HDF5LibraryException;
+    public synchronized static native boolean H5VLis_connector_registered_by_name(String name)
+        throws HDF5LibraryException;
     /**
      * H5VLis_connector_registered_by_value tests whether a VOL class has been registered.
      *
@@ -13500,9 +13985,10 @@ public class H5 implements java.io.Serializable {
      * @return  true if a VOL connector with that value has been registered
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native boolean H5VLis_connector_registered_by_value(int connector_value) throws HDF5LibraryException;
+    public synchronized static native boolean H5VLis_connector_registered_by_value(int connector_value)
+        throws HDF5LibraryException;
     /**
      * H5VLget_connector_id retrieves the ID for a registered VOL connector for a given object.
      *
@@ -13512,7 +13998,7 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native long H5VLget_connector_id(long object_id) throws HDF5LibraryException;
     /**
@@ -13524,9 +14010,10 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5VLget_connector_id_by_name(String name) throws HDF5LibraryException;
+    public synchronized static native long H5VLget_connector_id_by_name(String name)
+        throws HDF5LibraryException;
     /**
      * H5VLget_connector_id_by_value retrieves the ID for a registered VOL connector.
      *
@@ -13536,12 +14023,13 @@ public class H5 implements java.io.Serializable {
      * @return a VOL connector ID
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native long H5VLget_connector_id_by_value(int connector_value) throws HDF5LibraryException;
+    public synchronized static native long H5VLget_connector_id_by_value(int connector_value)
+        throws HDF5LibraryException;
     /**
      * H5VLget_connector_name returns the connector name for the VOL associated with the
-     *              object or file ID.
+     * object or file ID.
      *
      * @param object_id
      *            IN: Identifier of the object.
@@ -13549,9 +14037,10 @@ public class H5 implements java.io.Serializable {
      * @return the connector name
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native String H5VLget_connector_name(long object_id) throws HDF5LibraryException;
+    public synchronized static native String H5VLget_connector_name(long object_id)
+        throws HDF5LibraryException;
     /**
      * H5VLclose closes a VOL connector ID.
      *
@@ -13559,7 +14048,7 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the connector.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native void H5VLclose(long connector_id) throws HDF5LibraryException;
     /**
@@ -13569,14 +14058,14 @@ public class H5 implements java.io.Serializable {
      *            IN: Identifier of the connector.
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
-    public synchronized static native void H5VLunregister_connector(long connector_id) throws HDF5LibraryException;
+    public synchronized static native void H5VLunregister_connector(long connector_id)
+        throws HDF5LibraryException;
 
     // /////// unimplemented ////////
     // hid_t H5VLregister_connector(const H5VL_class_t *cls, hid_t vipl_id);
 
-
     // ////////////////////////////////////////////////////////////
     // //
     // H5Z: Filter Interface Functions //
@@ -13592,7 +14081,7 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative(TRUE/FALSE) value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Zfilter_avail(int filter) throws HDF5LibraryException;
 
@@ -13605,7 +14094,7 @@ public class H5 implements java.io.Serializable {
      * @return the filter information flags
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Zget_filter_info(int filter) throws HDF5LibraryException;
 
@@ -13618,13 +14107,11 @@ public class H5 implements java.io.Serializable {
      * @return a non-negative value if successful
      *
      * @exception HDF5LibraryException
-     *                - Error from the HDF-5 Library.
+     *            Error from the HDF-5 Library.
      **/
     public synchronized static native int H5Zunregister(int filter) throws HDF5LibraryException;
 
     // /////// unimplemented ////////
 
     // herr_t H5Zregister(const void *cls);
-
 }
-
diff --git a/java/src/hdf/hdf5lib/HDF5Constants.java b/java/src/hdf/hdf5lib/HDF5Constants.java
index 4125907..cbdf463 100644
--- a/java/src/hdf/hdf5lib/HDF5Constants.java
+++ b/java/src/hdf/hdf5lib/HDF5Constants.java
@@ -11,7 +11,6 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-
 package hdf.hdf5lib;
 
 import hdf.hdf5lib.structs.H5O_token_t;
@@ -27,15 +26,13 @@ import hdf.hdf5lib.structs.H5O_token_t;
  * See also: hdf.hdf5lib.HDF5Library
  */
 public class HDF5Constants {
-    static {
-        H5.loadH5Lib();
-    }
+    static { H5.loadH5Lib(); }
 
     // /////////////////////////////////////////////////////////////////////////
     // Get the HDF5 constants from the library //
     // /////////////////////////////////////////////////////////////////////////
 
-    //public static final long H5_QUARTER_HADDR_MAX = H5_QUARTER_HADDR_MAX();
+    // public static final long H5_QUARTER_HADDR_MAX = H5_QUARTER_HADDR_MAX();
 
     /** Special parameters for szip compression */
     public static final int H5_SZIP_MAX_PIXELS_PER_BLOCK = H5_SZIP_MAX_PIXELS_PER_BLOCK();
@@ -70,9 +67,11 @@ public class HDF5Constants {
     /** */
     public static final int H5AC_MAX_TRACE_FILE_NAME_LEN = H5AC_MAX_TRACE_FILE_NAME_LEN();
     /** */
-    public static final int H5AC_METADATA_WRITE_STRATEGY_PROCESS_ZERO_ONLY = H5AC_METADATA_WRITE_STRATEGY_PROCESS_ZERO_ONLY();
+    public static final int H5AC_METADATA_WRITE_STRATEGY_PROCESS_ZERO_ONLY =
+        H5AC_METADATA_WRITE_STRATEGY_PROCESS_ZERO_ONLY();
     /** */
-    public static final int H5AC_METADATA_WRITE_STRATEGY_DISTRIBUTED = H5AC_METADATA_WRITE_STRATEGY_DISTRIBUTED();
+    public static final int H5AC_METADATA_WRITE_STRATEGY_DISTRIBUTED =
+        H5AC_METADATA_WRITE_STRATEGY_DISTRIBUTED();
     /** */
     public static final int H5C_incr_off = H5C_incr_off();
     /** */
@@ -681,22 +680,22 @@ public class HDF5Constants {
     /** */
     public static final long H5FD_MEM_DEFAULT_OHDR_SIZE = H5FD_MEM_DEFAULT_OHDR_SIZE();
 
-//    public static final int H5G_DATASET = H5G_DATASET();
-//    public static final int H5G_GROUP = H5G_GROUP();
-//    public static final int H5G_LINK = H5G_LINK();
-//    public static final int H5G_UDLINK = H5G_UDLINK();
-//    public static final int H5G_LINK_ERROR = H5G_LINK_ERROR();
-//    public static final int H5G_LINK_HARD = H5G_LINK_HARD();
-//    public static final int H5G_LINK_SOFT = H5G_LINK_SOFT();
-//    public static final int H5G_NLIBTYPES = H5G_NLIBTYPES();
-//    public static final int H5G_NTYPES = H5G_NTYPES();
-//    public static final int H5G_NUSERTYPES = H5G_NUSERTYPES();
-//    public static final int H5G_RESERVED_5 = H5G_RESERVED_5();
-//    public static final int H5G_RESERVED_6 = H5G_RESERVED_6();
-//    public static final int H5G_RESERVED_7 = H5G_RESERVED_7();
-//    public static final int H5G_SAME_LOC = H5G_SAME_LOC();
-//    public static final int H5G_TYPE = H5G_TYPE();
-//    public static final int H5G_UNKNOWN = H5G_UNKNOWN();
+    //    public static final int H5G_DATASET = H5G_DATASET();
+    //    public static final int H5G_GROUP = H5G_GROUP();
+    //    public static final int H5G_LINK = H5G_LINK();
+    //    public static final int H5G_UDLINK = H5G_UDLINK();
+    //    public static final int H5G_LINK_ERROR = H5G_LINK_ERROR();
+    //    public static final int H5G_LINK_HARD = H5G_LINK_HARD();
+    //    public static final int H5G_LINK_SOFT = H5G_LINK_SOFT();
+    //    public static final int H5G_NLIBTYPES = H5G_NLIBTYPES();
+    //    public static final int H5G_NTYPES = H5G_NTYPES();
+    //    public static final int H5G_NUSERTYPES = H5G_NUSERTYPES();
+    //    public static final int H5G_RESERVED_5 = H5G_RESERVED_5();
+    //    public static final int H5G_RESERVED_6 = H5G_RESERVED_6();
+    //    public static final int H5G_RESERVED_7 = H5G_RESERVED_7();
+    //    public static final int H5G_SAME_LOC = H5G_SAME_LOC();
+    //    public static final int H5G_TYPE = H5G_TYPE();
+    //    public static final int H5G_UNKNOWN = H5G_UNKNOWN();
 
     /** */
     public static final int H5G_STORAGE_TYPE_UNKNOWN = H5G_STORAGE_TYPE_UNKNOWN();
@@ -756,7 +755,7 @@ public class HDF5Constants {
     /** */
     public static final int H5O_COPY_SHALLOW_HIERARCHY_FLAG = H5O_COPY_SHALLOW_HIERARCHY_FLAG();
     /** */
-    public static final int H5O_COPY_EXPAND_SOFT_LINK_FLAG =  H5O_COPY_EXPAND_SOFT_LINK_FLAG();
+    public static final int H5O_COPY_EXPAND_SOFT_LINK_FLAG = H5O_COPY_EXPAND_SOFT_LINK_FLAG();
     /** */
     public static final int H5O_COPY_EXPAND_EXT_LINK_FLAG = H5O_COPY_EXPAND_EXT_LINK_FLAG();
     /** */
@@ -1438,23 +1437,35 @@ public class HDF5Constants {
     public static final int H5Z_FILTER_SHUFFLE = H5Z_FILTER_SHUFFLE();
     /** Filter IDs - szip compression */
     public static final int H5Z_FILTER_SZIP = H5Z_FILTER_SZIP();
-    /** Flags for filter definition (stored)
-     * definition flag mask */
+    /**
+     * Flags for filter definition (stored)
+     * definition flag mask
+     */
     public static final int H5Z_FLAG_DEFMASK = H5Z_FLAG_DEFMASK();
-    /** Additional flags for filter invocation (not stored)
-     * invocation flag mask */
+    /**
+     * Additional flags for filter invocation (not stored)
+     * invocation flag mask
+     */
     public static final int H5Z_FLAG_INVMASK = H5Z_FLAG_INVMASK();
-    /** Flags for filter definition (stored)
-     * filter is mandatory */
+    /**
+     * Flags for filter definition (stored)
+     * filter is mandatory
+     */
     public static final int H5Z_FLAG_MANDATORY = H5Z_FLAG_MANDATORY();
-    /** Flags for filter definition (stored)
-     * filter is optional */
+    /**
+     * Flags for filter definition (stored)
+     * filter is optional
+     */
     public static final int H5Z_FLAG_OPTIONAL = H5Z_FLAG_OPTIONAL();
-    /** Additional flags for filter invocation (not stored)
-     * reverse direction; read */
+    /**
+     * Additional flags for filter invocation (not stored)
+     * reverse direction; read
+     */
     public static final int H5Z_FLAG_REVERSE = H5Z_FLAG_REVERSE();
-    /** Additional flags for filter invocation (not stored)
-     * skip EDC filters for read */
+    /**
+     * Additional flags for filter invocation (not stored)
+     * skip EDC filters for read
+     */
     public static final int H5Z_FLAG_SKIP_EDC = H5Z_FLAG_SKIP_EDC();
     /** Symbol to remove all filters in H5Premove_filter */
     public static final int H5Z_FILTER_ALL = H5Z_FILTER_ALL();
@@ -2953,5 +2964,4 @@ public class HDF5Constants {
     private static native final int H5Z_SCALEOFFSET_USER_NPARMS();
 
     private static native final int H5Z_FILTER_ALL();
-
 }
diff --git a/java/src/hdf/hdf5lib/HDF5GroupInfo.java b/java/src/hdf/hdf5lib/HDF5GroupInfo.java
index 4c31af7..220cfb6 100644
--- a/java/src/hdf/hdf5lib/HDF5GroupInfo.java
+++ b/java/src/hdf/hdf5lib/HDF5GroupInfo.java
@@ -11,7 +11,6 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-
 package hdf.hdf5lib;
 
 /**
@@ -41,14 +40,17 @@ public class HDF5GroupInfo {
     long mtime;
     int linklen;
 
-    /** Container for the information reported about an HDF5 Object
-      * from the H5Gget_obj_info() method */
-    public HDF5GroupInfo() {
-        fileno = new long[2];
-        objno = new long[2];
-        nlink = -1;
-        type = -1;
-        mtime = 0;
+    /**
+     * Container for the information reported about an HDF5 Object
+     * from the H5Gget_obj_info() method
+     */
+    public HDF5GroupInfo()
+    {
+        fileno  = new long[2];
+        objno   = new long[2];
+        nlink   = -1;
+        type    = -1;
+        mtime   = 0;
         linklen = 0;
     }
 
@@ -68,84 +70,79 @@ public class HDF5GroupInfo {
      * @param len
      *            Length of link
      **/
-    public void setGroupInfo(long[] fn, long[] on, int nl, int t, long mt,
-            int len) {
-        fileno = fn;
-        objno = on;
-        nlink = nl;
-        type = t;
-        mtime = mt;
+    public void setGroupInfo(long[] fn, long[] on, int nl, int t, long mt, int len)
+    {
+        fileno  = fn;
+        objno   = on;
+        nlink   = nl;
+        type    = t;
+        mtime   = mt;
         linklen = len;
     }
 
     /** Resets all the group information to defaults. */
-    public void reset() {
+    public void reset()
+    {
         fileno[0] = 0;
         fileno[1] = 0;
-        objno[0] = 0;
-        objno[1] = 0;
-        nlink = -1;
-        type = -1;
-        mtime = 0;
-        linklen = 0;
+        objno[0]  = 0;
+        objno[1]  = 0;
+        nlink     = -1;
+        type      = -1;
+        mtime     = 0;
+        linklen   = 0;
     }
 
-    /** fileno accessors
+    /**
+     * fileno accessors
      * @return the file number if successful
      */
-    public long[] getFileno() {
-        return fileno;
-    }
+    public long[] getFileno() { return fileno; }
 
-    /** accessors
+    /**
+     * accessors
      * @return the object number if successful
      */
-    public long[] getObjno() {
-        return objno;
-    }
+    public long[] getObjno() { return objno; }
 
-    /** accessors
+    /**
+     * accessors
      * @return type of group if successful
      */
-    public int getType() {
-        return type;
-    }
+    public int getType() { return type; }
 
-    /** accessors
+    /**
+     * accessors
      * @return the number of links in the group if successful
      */
-    public int getNlink() {
-        return nlink;
-    }
+    public int getNlink() { return nlink; }
 
-    /** accessors
+    /**
+     * accessors
      * @return the modified time value if successful
      */
-    public long getMtime() {
-        return mtime;
-    }
+    public long getMtime() { return mtime; }
 
-    /** accessors
+    /**
+     * accessors
      * @return a length of link name if successful
      */
-    public int getLinklen() {
-        return linklen;
-    }
+    public int getLinklen() { return linklen; }
 
     /**
      * The fileno and objno fields contain four values which uniquely identify
      * an object among those HDF5 files.
      */
     @Override
-    public boolean equals(Object obj) {
+    public boolean equals(Object obj)
+    {
         if (!(obj instanceof HDF5GroupInfo)) {
             return false;
         }
 
-        HDF5GroupInfo target = (HDF5GroupInfo) obj;
-        if ((fileno[0] == target.fileno[0]) && (fileno[1] == target.fileno[1])
-                && (objno[0] == target.objno[0])
-                && (objno[1] == target.objno[1])) {
+        HDF5GroupInfo target = (HDF5GroupInfo)obj;
+        if ((fileno[0] == target.fileno[0]) && (fileno[1] == target.fileno[1]) &&
+            (objno[0] == target.objno[0]) && (objno[1] == target.objno[1])) {
             return true;
         }
         else {
@@ -158,9 +155,7 @@ public class HDF5GroupInfo {
      *
      * @return the object id
      */
-    public long getOID() {
-        return objno[0];
-    }
+    public long getOID() { return objno[0]; }
 
     /**
      * /** Converts this object to a String representation.
@@ -168,9 +163,10 @@ public class HDF5GroupInfo {
      * @return a string representation of this object
      */
     @Override
-    public String toString() {
+    public String toString()
+    {
         String fileStr = "fileno=null";
-        String objStr = "objno=null";
+        String objStr  = "objno=null";
 
         if (fileno != null) {
             fileStr = "fileno[0]=" + fileno[0] + ",fileno[1]=" + fileno[1];
@@ -180,9 +176,7 @@ public class HDF5GroupInfo {
             objStr = "objno[0]=" + objno[0] + ",objno[1]=" + objno[1];
         }
 
-        return getClass().getName() + "[" + fileStr + "," + objStr + ",type="
-                + type + ",nlink=" + nlink + ",mtime=" + mtime + ",linklen="
-                + linklen + "]";
+        return getClass().getName() + "[" + fileStr + "," + objStr + ",type=" + type + ",nlink=" + nlink +
+            ",mtime=" + mtime + ",linklen=" + linklen + "]";
     }
-
 }
diff --git a/java/src/hdf/hdf5lib/HDFArray.java b/java/src/hdf/hdf5lib/HDFArray.java
index 21e2b02..8525fb0 100644
--- a/java/src/hdf/hdf5lib/HDFArray.java
+++ b/java/src/hdf/hdf5lib/HDFArray.java
@@ -13,36 +13,34 @@
 
 package hdf.hdf5lib;
 
+import java.util.Arrays;
+
 import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5JavaException;
-import java.util.Arrays;
 
 /**
  * This is a class for handling multidimensional arrays for HDF.
  * 
    
  * The purpose is to allow the storage and retrieval of arbitrary array types containing scientific data.
  * 
    
- * The methods support the conversion of an array to and from Java to a one-dimensional array of bytes suitable for I/O
- * by the C library.
- * 
    
- * This class heavily uses the HDFNativeData class to convert between
- * Java and C representations.
+ * The methods support the conversion of an array to and from Java to a one-dimensional array of bytes
+ * suitable for I/O by the C library. 
     This class heavily uses the HDFNativeData class to convert between Java and C
+ * representations.
  */
 
 public class HDFArray {
-    private Object _theArray = null;
+    private Object _theArray      = null;
     private ArrayDescriptor _desc = null;
-    private byte[] _barray = null;
+    private byte[] _barray        = null;
 
     // public HDFArray() {}
 
     /**
-     * The input must be a Java Array (possibly multidimensional) of primitive numbers or sub-classes of Number.
-     * 
    
-     * The input is analysed to determine the number of dimensions and size of each dimension, as well as the type of
-     * the elements.
-     * 
    
-     * The description is saved in private variables, and used to convert data.
+     * The input must be a Java Array (possibly multidimensional) of primitive numbers or sub-classes of
+     * Number. 
     The input is analysed to determine the number of dimensions and size of each dimension, as
+     * well as the type of the elements. 
     The description is saved in private variables, and used to
+     * convert data.
      *
      * @param anArray
      *                The array object.
@@ -58,25 +56,26 @@ public class HDFArray {
         if (tc.isArray() == false) {
             /* exception: not an array */
             HDF5JavaException ex = new HDF5JavaException("HDFArray: not an array?: ");
-            throw (ex);
+            throw(ex);
         }
         _theArray = anArray;
-        _desc = new ArrayDescriptor(_theArray);
+        _desc     = new ArrayDescriptor(_theArray);
 
         /* extra error checking -- probably not needed */
         if (_desc == null) {
-            HDF5JavaException ex = new HDF5JavaException("HDFArray: internal error: array description failed?: ");
-            throw (ex);
+            HDF5JavaException ex =
+                new HDF5JavaException("HDFArray: internal error: array description failed?: ");
+            throw(ex);
         }
     }
 
     /**
      * Allocate a one-dimensional array of bytes sufficient to store the array.
      *
-     * @return A one-D array of bytes, filled with zeroes. The bytes are sufficient to hold the data of the Array passed
-     *         to the constructor.
+     * @return A one-D array of bytes, filled with zeroes. The bytes are sufficient to hold the data of the
+     *        Array passed to the constructor.
      * @exception hdf.hdf5lib.exceptions.HDF5JavaException
-     *                Allocation failed.
+     *        Allocation failed.
      */
 
     public byte[] emptyBytes() throws HDF5JavaException
@@ -84,14 +83,14 @@ public class HDFArray {
         byte[] b = null;
 
         if ((ArrayDescriptor.dims == 1) && (ArrayDescriptor.NT == 'B')) {
-            b = (byte[]) _theArray;
+            b = (byte[])_theArray;
         }
         else {
             b = new byte[ArrayDescriptor.totalSize];
         }
         if (b == null) {
             HDF5JavaException ex = new HDF5JavaException("HDFArray: emptyBytes: allocation failed");
-            throw (ex);
+            throw(ex);
         }
         return (b);
     }
@@ -112,14 +111,14 @@ public class HDFArray {
         if (_theArray == null) {
             /* exception: not an array */
             HDF5JavaException ex = new HDF5JavaException("HDFArray: byteify not an array?: ");
-            throw (ex);
+            throw(ex);
         }
 
         if (ArrayDescriptor.dims == 1) {
             /* special case */
             if (ArrayDescriptor.NT == 'B') {
                 /* really special case! */
-                _barray = (byte[]) _theArray;
+                _barray = (byte[])_theArray;
                 return _barray;
             }
             else {
@@ -128,54 +127,56 @@ public class HDFArray {
 
                     byte[] therow;
                     if (ArrayDescriptor.NT == 'I') {
-                        therow = HDFNativeData.intToByte(0, ArrayDescriptor.dimlen[1], (int[]) _theArray);
+                        therow = HDFNativeData.intToByte(0, ArrayDescriptor.dimlen[1], (int[])_theArray);
                     }
                     else if (ArrayDescriptor.NT == 'S') {
-                        therow = HDFNativeData.shortToByte(0, ArrayDescriptor.dimlen[1], (short[]) _theArray);
+                        therow = HDFNativeData.shortToByte(0, ArrayDescriptor.dimlen[1], (short[])_theArray);
                     }
                     else if (ArrayDescriptor.NT == 'F') {
-                        therow = HDFNativeData.floatToByte(0, ArrayDescriptor.dimlen[1], (float[]) _theArray);
+                        therow = HDFNativeData.floatToByte(0, ArrayDescriptor.dimlen[1], (float[])_theArray);
                     }
                     else if (ArrayDescriptor.NT == 'J') {
-                        therow = HDFNativeData.longToByte(0, ArrayDescriptor.dimlen[1], (long[]) _theArray);
+                        therow = HDFNativeData.longToByte(0, ArrayDescriptor.dimlen[1], (long[])_theArray);
                     }
                     else if (ArrayDescriptor.NT == 'D') {
-                        therow = HDFNativeData.doubleToByte(0, ArrayDescriptor.dimlen[1], (double[]) _theArray);
+                        therow =
+                            HDFNativeData.doubleToByte(0, ArrayDescriptor.dimlen[1], (double[])_theArray);
                     }
                     else if (ArrayDescriptor.NT == 'L') {
                         if (ArrayDescriptor.className.equals("java.lang.Byte")) {
-                            therow = ByteObjToByte((Byte[]) _theArray);
+                            therow = ByteObjToByte((Byte[])_theArray);
                         }
                         else if (ArrayDescriptor.className.equals("java.lang.Integer")) {
-                            therow = IntegerToByte((Integer[]) _theArray);
+                            therow = IntegerToByte((Integer[])_theArray);
                         }
                         else if (ArrayDescriptor.className.equals("java.lang.Short")) {
-                            therow = ShortToByte((Short[]) _theArray);
+                            therow = ShortToByte((Short[])_theArray);
                         }
                         else if (ArrayDescriptor.className.equals("java.lang.Float")) {
-                            therow = FloatObjToByte((Float[]) _theArray);
+                            therow = FloatObjToByte((Float[])_theArray);
                         }
                         else if (ArrayDescriptor.className.equals("java.lang.Double")) {
-                            therow = DoubleObjToByte((Double[]) _theArray);
+                            therow = DoubleObjToByte((Double[])_theArray);
                         }
                         else if (ArrayDescriptor.className.equals("java.lang.Long")) {
-                            therow = LongObjToByte((Long[]) _theArray);
+                            therow = LongObjToByte((Long[])_theArray);
                         }
                         else {
                             HDF5JavaException ex = new HDF5JavaException("HDFArray: unknown type of Object?");
-                            throw (ex);
+                            throw(ex);
                         }
                     }
                     else {
                         HDF5JavaException ex = new HDF5JavaException("HDFArray: unknown type of data?");
-                        throw (ex);
+                        throw(ex);
                     }
-                    System.arraycopy(therow, 0, _barray, 0, (ArrayDescriptor.dimlen[1] * ArrayDescriptor.NTsize));
+                    System.arraycopy(therow, 0, _barray, 0,
+                                     (ArrayDescriptor.dimlen[1] * ArrayDescriptor.NTsize));
                     return _barray;
                 }
                 catch (OutOfMemoryError err) {
                     HDF5JavaException ex = new HDF5JavaException("HDFArray: byteify array too big?");
-                    throw (ex);
+                    throw(ex);
                 }
             }
         }
@@ -185,15 +186,15 @@ public class HDFArray {
         }
         catch (OutOfMemoryError err) {
             HDF5JavaException ex = new HDF5JavaException("HDFArray: byteify array too big?");
-            throw (ex);
+            throw(ex);
         }
 
         Object oo = _theArray;
-        int n = 0; /* the current byte */
+        int n     = 0; /* the current byte */
         int index = 0;
         int i;
         while (n < ArrayDescriptor.totalSize) {
-            oo = ArrayDescriptor.objs[0];
+            oo    = ArrayDescriptor.objs[0];
             index = n / ArrayDescriptor.bytetoindex[0];
             index %= ArrayDescriptor.dimlen[0];
             for (i = 0; i < (ArrayDescriptor.dims); i++) {
@@ -209,9 +210,9 @@ public class HDFArray {
                     if (index > (ArrayDescriptor.dimlen[i] - 1)) {
                         throw new java.lang.IndexOutOfBoundsException("HDFArray: byteify index OOB?");
                     }
-                    oo = java.lang.reflect.Array.get(oo, index);
+                    oo                              = java.lang.reflect.Array.get(oo, index);
                     ArrayDescriptor.currentindex[i] = index;
-                    ArrayDescriptor.objs[i] = oo;
+                    ArrayDescriptor.objs[i]         = oo;
                 }
             }
 
@@ -220,85 +221,90 @@ public class HDFArray {
             try {
                 if (ArrayDescriptor.NT == 'J') {
                     arow = HDFNativeData.longToByte(0, ArrayDescriptor.dimlen[ArrayDescriptor.dims],
-                            (long[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                                                    (long[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                 }
                 else if (ArrayDescriptor.NT == 'I') {
                     arow = HDFNativeData.intToByte(0, ArrayDescriptor.dimlen[ArrayDescriptor.dims],
-                            (int[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                                                   (int[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                 }
                 else if (ArrayDescriptor.NT == 'S') {
                     arow = HDFNativeData.shortToByte(0, ArrayDescriptor.dimlen[ArrayDescriptor.dims],
-                            (short[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                                                     (short[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                 }
                 else if (ArrayDescriptor.NT == 'B') {
-                    arow = (byte[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1];
+                    arow = (byte[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1];
                 }
                 else if (ArrayDescriptor.NT == 'F') {
                     /* 32 bit float */
                     arow = HDFNativeData.floatToByte(0, ArrayDescriptor.dimlen[ArrayDescriptor.dims],
-                            (float[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                                                     (float[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                 }
                 else if (ArrayDescriptor.NT == 'D') {
                     /* 64 bit float */
-                    arow = HDFNativeData.doubleToByte(0, ArrayDescriptor.dimlen[ArrayDescriptor.dims],
-                            (double[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                    arow =
+                        HDFNativeData.doubleToByte(0, ArrayDescriptor.dimlen[ArrayDescriptor.dims],
+                                                   (double[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                 }
                 else if (ArrayDescriptor.NT == 'L') {
                     if (ArrayDescriptor.className.equals("java.lang.Byte")) {
-                        arow = ByteObjToByte((Byte[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                        arow = ByteObjToByte((Byte[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                     }
                     else if (ArrayDescriptor.className.equals("java.lang.Integer")) {
-                        arow = IntegerToByte((Integer[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                        arow = IntegerToByte((Integer[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                     }
                     else if (ArrayDescriptor.className.equals("java.lang.Short")) {
-                        arow = ShortToByte((Short[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                        arow = ShortToByte((Short[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                     }
                     else if (ArrayDescriptor.className.equals("java.lang.Float")) {
-                        arow = FloatObjToByte((Float[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                        arow = FloatObjToByte((Float[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                     }
                     else if (ArrayDescriptor.className.equals("java.lang.Double")) {
-                        arow = DoubleObjToByte((Double[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                        arow = DoubleObjToByte((Double[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                     }
                     else if (ArrayDescriptor.className.equals("java.lang.Long")) {
-                        arow = LongObjToByte((Long[]) ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
+                        arow = LongObjToByte((Long[])ArrayDescriptor.objs[ArrayDescriptor.dims - 1]);
                     }
                     else {
-                        HDF5JavaException ex = new HDF5JavaException("HDFArray: byteify Object type not implemented?");
-                        throw (ex);
+                        HDF5JavaException ex =
+                            new HDF5JavaException("HDFArray: byteify Object type not implemented?");
+                        throw(ex);
                     }
                 }
                 else {
-                    HDF5JavaException ex = new HDF5JavaException("HDFArray: byteify unknown type not implemented?");
-                    throw (ex);
+                    HDF5JavaException ex =
+                        new HDF5JavaException("HDFArray: byteify unknown type not implemented?");
+                    throw(ex);
                 }
                 System.arraycopy(arow, 0, _barray, n,
-                        (ArrayDescriptor.dimlen[ArrayDescriptor.dims] * ArrayDescriptor.NTsize));
+                                 (ArrayDescriptor.dimlen[ArrayDescriptor.dims] * ArrayDescriptor.NTsize));
                 n += ArrayDescriptor.bytetoindex[ArrayDescriptor.dims - 1];
             }
             catch (OutOfMemoryError err) {
                 HDF5JavaException ex = new HDF5JavaException("HDFArray: byteify array too big?");
-                throw (ex);
+                throw(ex);
             }
         }
         /* assert: the whole array is completed--currentindex should == len - 1 */
         /* error checks */
         if (n < ArrayDescriptor.totalSize) {
-            throw new java.lang.InternalError(new String("HDFArray::byteify: Panic didn't complete all input data: n=  "
-                    + n + " size = " + ArrayDescriptor.totalSize));
+            throw new java.lang.InternalError(
+                new String("HDFArray::byteify: Panic didn't complete all input data: n=  " + n +
+                           " size = " + ArrayDescriptor.totalSize));
         }
         for (i = 0; i < ArrayDescriptor.dims; i++) {
             if (ArrayDescriptor.currentindex[i] != ArrayDescriptor.dimlen[i] - 1) {
-                throw new java.lang.InternalError(new String(
-                        "Panic didn't complete all data: currentindex[" + i + "] = " + ArrayDescriptor.currentindex[i]
-                                + " (should be " + (ArrayDescriptor.dimlen[i] - 1) + " ?)"));
+                throw new java.lang.InternalError(new String("Panic didn't complete all data: currentindex[" +
+                                                             i + "] = " + ArrayDescriptor.currentindex[i] +
+                                                             " (should be " +
+                                                             (ArrayDescriptor.dimlen[i] - 1) + " ?)"));
             }
         }
         return _barray;
     }
 
     /**
-     * Given a one-dimensional array of bytes representing numbers, convert it to a java array of the shape and size
-     * passed to the constructor.
+     * Given a one-dimensional array of bytes representing numbers, convert it to a java array of the shape
+     * and size passed to the constructor.
      *
      * @param bytes
      *              The bytes to construct the Array.
@@ -312,13 +318,13 @@ public class HDFArray {
         if (_theArray == null) {
             /* exception: not an array */
             HDF5JavaException ex = new HDF5JavaException("arrayify: not an array?: ");
-            throw (ex);
+            throw(ex);
         }
 
         if (java.lang.reflect.Array.getLength(bytes) != ArrayDescriptor.totalSize) {
             /* exception: array not right size */
             HDF5JavaException ex = new HDF5JavaException("arrayify: array is wrong size?: ");
-            throw (ex);
+            throw(ex);
         }
         _barray = bytes; /* hope that the bytes are correct.... */
 
@@ -387,74 +393,77 @@ public class HDFArray {
                         return _theArray;
                     }
                     else {
-                        HDF5JavaException ex = new HDF5JavaException("arrayify:  Object type not implemented yet...");
-                        throw (ex);
+                        HDF5JavaException ex =
+                            new HDF5JavaException("arrayify:  Object type not implemented yet...");
+                        throw(ex);
                     }
                 }
                 else {
-                    HDF5JavaException ex = new HDF5JavaException("arrayify:  unknown type not implemented yet...");
-                    throw (ex);
+                    HDF5JavaException ex =
+                        new HDF5JavaException("arrayify:  unknown type not implemented yet...");
+                    throw(ex);
                 }
             }
             catch (OutOfMemoryError err) {
                 HDF5JavaException ex = new HDF5JavaException("HDFArray: arrayify array too big?");
-                throw (ex);
+                throw(ex);
             }
         }
         /* Assert dims >= 2 */
 
         Object oo = _theArray;
-        int n = 0; /* the current byte */
-        int m = 0; /* the current array index */
+        int n     = 0; /* the current byte */
+        int m     = 0; /* the current array index */
         int index = 0;
         int i;
         Object flattenedArray = null;
 
         switch (ArrayDescriptor.NT) {
         case 'J':
-            flattenedArray = (Object) HDFNativeData.byteToLong(_barray);
+            flattenedArray = (Object)HDFNativeData.byteToLong(_barray);
             break;
         case 'S':
-            flattenedArray = (Object) HDFNativeData.byteToShort(_barray);
+            flattenedArray = (Object)HDFNativeData.byteToShort(_barray);
             break;
         case 'I':
-            flattenedArray = (Object) HDFNativeData.byteToInt(_barray);
+            flattenedArray = (Object)HDFNativeData.byteToInt(_barray);
             break;
         case 'F':
-            flattenedArray = (Object) HDFNativeData.byteToFloat(_barray);
+            flattenedArray = (Object)HDFNativeData.byteToFloat(_barray);
             break;
         case 'D':
-            flattenedArray = (Object) HDFNativeData.byteToDouble(_barray);
+            flattenedArray = (Object)HDFNativeData.byteToDouble(_barray);
             break;
         case 'B':
-            flattenedArray = (Object) _barray;
+            flattenedArray = (Object)_barray;
             break;
-        case 'L':
-            {
-                if (ArrayDescriptor.className.equals("java.lang.Byte"))
-                    flattenedArray = (Object) ByteToByteObj(_barray);
-                else if (ArrayDescriptor.className.equals("java.lang.Short"))
-                    flattenedArray = (Object) ByteToShort(_barray);
-                else if (ArrayDescriptor.className.equals("java.lang.Integer"))
-                    flattenedArray = (Object) ByteToInteger(_barray);
-                else if (ArrayDescriptor.className.equals("java.lang.Long"))
-                    flattenedArray = (Object) ByteToLongObj(_barray);
-                else if (ArrayDescriptor.className.equals("java.lang.Float"))
-                    flattenedArray = (Object) ByteToFloatObj(_barray);
-                else if (ArrayDescriptor.className.equals("java.lang.Double"))
-                    flattenedArray = (Object) ByteToDoubleObj(_barray);
-                else {
-                    HDF5JavaException ex = new HDF5JavaException("HDFArray: unsupported Object type: " + ArrayDescriptor.NT);
-                    throw (ex);
-                }
-            } // end of statement for arrays of boxed objects
+        case 'L': {
+            if (ArrayDescriptor.className.equals("java.lang.Byte"))
+                flattenedArray = (Object)ByteToByteObj(_barray);
+            else if (ArrayDescriptor.className.equals("java.lang.Short"))
+                flattenedArray = (Object)ByteToShort(_barray);
+            else if (ArrayDescriptor.className.equals("java.lang.Integer"))
+                flattenedArray = (Object)ByteToInteger(_barray);
+            else if (ArrayDescriptor.className.equals("java.lang.Long"))
+                flattenedArray = (Object)ByteToLongObj(_barray);
+            else if (ArrayDescriptor.className.equals("java.lang.Float"))
+                flattenedArray = (Object)ByteToFloatObj(_barray);
+            else if (ArrayDescriptor.className.equals("java.lang.Double"))
+                flattenedArray = (Object)ByteToDoubleObj(_barray);
+            else {
+                HDF5JavaException ex =
+                    new HDF5JavaException("HDFArray: unsupported Object type: " + ArrayDescriptor.NT);
+                throw(ex);
+            }
+        } // end of statement for arrays of boxed objects
         default:
-            HDF5JavaException ex = new HDF5JavaException("HDFArray: unknown or unsupported type: " + ArrayDescriptor.NT);
-            throw (ex);
+            HDF5JavaException ex =
+                new HDF5JavaException("HDFArray: unknown or unsupported type: " + ArrayDescriptor.NT);
+            throw(ex);
         } // end of switch statement for arrays of primitives
 
         while (n < ArrayDescriptor.totalSize) {
-            oo = ArrayDescriptor.objs[0];
+            oo    = ArrayDescriptor.objs[0];
             index = n / ArrayDescriptor.bytetoindex[0];
             index %= ArrayDescriptor.dimlen[0];
             for (i = 0; i < (ArrayDescriptor.dims); i++) {
@@ -471,86 +480,88 @@ public class HDFArray {
                         System.out.println("out of bounds?");
                         return null;
                     }
-                    oo = java.lang.reflect.Array.get(oo, index);
+                    oo                              = java.lang.reflect.Array.get(oo, index);
                     ArrayDescriptor.currentindex[i] = index;
-                    ArrayDescriptor.objs[i] = oo;
+                    ArrayDescriptor.objs[i]         = oo;
                 }
             }
 
             /* array-ify */
             try {
                 Object arow = null;
-                int mm = m + ArrayDescriptor.dimlen[ArrayDescriptor.dims];
+                int mm      = m + ArrayDescriptor.dimlen[ArrayDescriptor.dims];
                 switch (ArrayDescriptor.NT) {
                 case 'B':
-                    arow = (Object) Arrays.copyOfRange((byte[]) flattenedArray, m, mm);
+                    arow = (Object)Arrays.copyOfRange((byte[])flattenedArray, m, mm);
                     break;
                 case 'S':
-                    arow = (Object) Arrays.copyOfRange((short[]) flattenedArray, m, mm);
+                    arow = (Object)Arrays.copyOfRange((short[])flattenedArray, m, mm);
                     break;
                 case 'I':
-                    arow = (Object) Arrays.copyOfRange((int[]) flattenedArray, m, mm);
+                    arow = (Object)Arrays.copyOfRange((int[])flattenedArray, m, mm);
                     break;
                 case 'J':
-                    arow = (Object) Arrays.copyOfRange((long[]) flattenedArray, m, mm);
+                    arow = (Object)Arrays.copyOfRange((long[])flattenedArray, m, mm);
                     break;
                 case 'F':
-                    arow = (Object) Arrays.copyOfRange((float[]) flattenedArray, m, mm);
+                    arow = (Object)Arrays.copyOfRange((float[])flattenedArray, m, mm);
                     break;
                 case 'D':
-                    arow = (Object) Arrays.copyOfRange((double[]) flattenedArray, m, mm);
+                    arow = (Object)Arrays.copyOfRange((double[])flattenedArray, m, mm);
                     break;
-                case 'L':
-                    {
-                        if (ArrayDescriptor.className.equals("java.lang.Byte"))
-                            arow = (Object) Arrays.copyOfRange((Byte[]) flattenedArray, m, mm);
-                        else if (ArrayDescriptor.className.equals("java.lang.Short"))
-                            arow = (Object) Arrays.copyOfRange((Short[]) flattenedArray, m, mm);
-                        else if (ArrayDescriptor.className.equals("java.lang.Integer"))
-                            arow = (Object) Arrays.copyOfRange((Integer[]) flattenedArray, m, mm);
-                        else if (ArrayDescriptor.className.equals("java.lang.Long"))
-                            arow = (Object) Arrays.copyOfRange((Long[]) flattenedArray, m, mm);
-                        else if (ArrayDescriptor.className.equals("java.lang.Float"))
-                            arow = (Object) Arrays.copyOfRange((Float[]) flattenedArray, m, mm);
-                        else if (ArrayDescriptor.className.equals("java.lang.Double"))
-                            arow = (Object) Arrays.copyOfRange((Double[]) flattenedArray, m, mm);
-                        else {
-                            HDF5JavaException ex = new HDF5JavaException("HDFArray: unsupported Object type: " + ArrayDescriptor.NT);
-                            throw (ex);
-                        }
-                    } // end of statement for arrays of boxed numerics
+                case 'L': {
+                    if (ArrayDescriptor.className.equals("java.lang.Byte"))
+                        arow = (Object)Arrays.copyOfRange((Byte[])flattenedArray, m, mm);
+                    else if (ArrayDescriptor.className.equals("java.lang.Short"))
+                        arow = (Object)Arrays.copyOfRange((Short[])flattenedArray, m, mm);
+                    else if (ArrayDescriptor.className.equals("java.lang.Integer"))
+                        arow = (Object)Arrays.copyOfRange((Integer[])flattenedArray, m, mm);
+                    else if (ArrayDescriptor.className.equals("java.lang.Long"))
+                        arow = (Object)Arrays.copyOfRange((Long[])flattenedArray, m, mm);
+                    else if (ArrayDescriptor.className.equals("java.lang.Float"))
+                        arow = (Object)Arrays.copyOfRange((Float[])flattenedArray, m, mm);
+                    else if (ArrayDescriptor.className.equals("java.lang.Double"))
+                        arow = (Object)Arrays.copyOfRange((Double[])flattenedArray, m, mm);
+                    else {
+                        HDF5JavaException ex =
+                            new HDF5JavaException("HDFArray: unsupported Object type: " + ArrayDescriptor.NT);
+                        throw(ex);
+                    }
+                } // end of statement for arrays of boxed numerics
                 } // end of switch statement for arrays of primitives
 
                 java.lang.reflect.Array.set(ArrayDescriptor.objs[ArrayDescriptor.dims - 2],
-                        (ArrayDescriptor.currentindex[ArrayDescriptor.dims - 1]), arow);
+                                            (ArrayDescriptor.currentindex[ArrayDescriptor.dims - 1]), arow);
                 n += ArrayDescriptor.bytetoindex[ArrayDescriptor.dims - 1];
                 ArrayDescriptor.currentindex[ArrayDescriptor.dims - 1]++;
                 m = mm;
             }
             catch (OutOfMemoryError err) {
                 HDF5JavaException ex = new HDF5JavaException("HDFArray: arrayify array too big?");
-                throw (ex);
+                throw(ex);
             }
         }
 
         /* assert: the whole array is completed--currentindex should == len - 1 */
         /* error checks */
         if (n < ArrayDescriptor.totalSize) {
-            throw new java.lang.InternalError(new String("HDFArray::arrayify Panic didn't complete all input data: n=  "
-                    + n + " size = " + ArrayDescriptor.totalSize));
+            throw new java.lang.InternalError(
+                new String("HDFArray::arrayify Panic didn't complete all input data: n=  " + n +
+                           " size = " + ArrayDescriptor.totalSize));
         }
         for (i = 0; i <= ArrayDescriptor.dims - 2; i++) {
             if (ArrayDescriptor.currentindex[i] != ArrayDescriptor.dimlen[i] - 1) {
                 throw new java.lang.InternalError(
-                        new String("HDFArray::arrayify Panic didn't complete all data: currentindex[" + i + "] = "
-                                + ArrayDescriptor.currentindex[i] + " (should be " + (ArrayDescriptor.dimlen[i] - 1)
-                                + "?"));
+                    new String("HDFArray::arrayify Panic didn't complete all data: currentindex[" + i +
+                               "] = " + ArrayDescriptor.currentindex[i] + " (should be " +
+                               (ArrayDescriptor.dimlen[i] - 1) + "?"));
             }
         }
-        if (ArrayDescriptor.currentindex[ArrayDescriptor.dims - 1] != ArrayDescriptor.dimlen[ArrayDescriptor.dims - 1]) {
-            throw new java.lang.InternalError(
-                    new String("HDFArray::arrayify Panic didn't complete all data: currentindex[" + i + "] = "
-                            + ArrayDescriptor.currentindex[i] + " (should be " + (ArrayDescriptor.dimlen[i]) + "?"));
+        if (ArrayDescriptor.currentindex[ArrayDescriptor.dims - 1] !=
+            ArrayDescriptor.dimlen[ArrayDescriptor.dims - 1]) {
+            throw new java.lang.InternalError(new String(
+                "HDFArray::arrayify Panic didn't complete all data: currentindex[" + i + "] = " +
+                ArrayDescriptor.currentindex[i] + " (should be " + (ArrayDescriptor.dimlen[i]) + "?"));
         }
 
         return _theArray;
@@ -559,7 +570,7 @@ public class HDFArray {
     private byte[] IntegerToByte(Integer in[])
     {
         int nelems = java.lang.reflect.Array.getLength(in);
-        int[] out = new int[nelems];
+        int[] out  = new int[nelems];
 
         for (int i = 0; i < nelems; i++) {
             out[i] = in[i].intValue();
@@ -569,8 +580,8 @@ public class HDFArray {
 
     private Integer[] ByteToInteger(byte[] bin)
     {
-        int in[] = HDFNativeData.byteToInt(bin);
-        int nelems = java.lang.reflect.Array.getLength(in);
+        int in[]      = HDFNativeData.byteToInt(bin);
+        int nelems    = java.lang.reflect.Array.getLength(in);
         Integer[] out = new Integer[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -581,8 +592,8 @@ public class HDFArray {
 
     private Integer[] ByteToInteger(int start, int len, byte[] bin)
     {
-        int in[] = HDFNativeData.byteToInt(start, len, bin);
-        int nelems = java.lang.reflect.Array.getLength(in);
+        int in[]      = HDFNativeData.byteToInt(start, len, bin);
+        int nelems    = java.lang.reflect.Array.getLength(in);
         Integer[] out = new Integer[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -593,7 +604,7 @@ public class HDFArray {
 
     private byte[] ShortToByte(Short in[])
     {
-        int nelems = java.lang.reflect.Array.getLength(in);
+        int nelems  = java.lang.reflect.Array.getLength(in);
         short[] out = new short[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -604,8 +615,8 @@ public class HDFArray {
 
     private Short[] ByteToShort(byte[] bin)
     {
-        short in[] = HDFNativeData.byteToShort(bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        short in[]  = HDFNativeData.byteToShort(bin);
+        int nelems  = java.lang.reflect.Array.getLength((Object)in);
         Short[] out = new Short[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -616,8 +627,8 @@ public class HDFArray {
 
     private Short[] ByteToShort(int start, int len, byte[] bin)
     {
-        short in[] = (short[]) HDFNativeData.byteToShort(start, len, bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        short in[]  = (short[])HDFNativeData.byteToShort(start, len, bin);
+        int nelems  = java.lang.reflect.Array.getLength((Object)in);
         Short[] out = new Short[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -628,7 +639,7 @@ public class HDFArray {
 
     private byte[] ByteObjToByte(Byte in[])
     {
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        int nelems = java.lang.reflect.Array.getLength((Object)in);
         byte[] out = new byte[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -639,7 +650,7 @@ public class HDFArray {
 
     private Byte[] ByteToByteObj(byte[] bin)
     {
-        int nelems = java.lang.reflect.Array.getLength((Object) bin);
+        int nelems = java.lang.reflect.Array.getLength((Object)bin);
         Byte[] out = new Byte[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -660,7 +671,7 @@ public class HDFArray {
 
     private byte[] FloatObjToByte(Float in[])
     {
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        int nelems  = java.lang.reflect.Array.getLength((Object)in);
         float[] out = new float[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -671,8 +682,8 @@ public class HDFArray {
 
     private Float[] ByteToFloatObj(byte[] bin)
     {
-        float in[] = (float[]) HDFNativeData.byteToFloat(bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        float in[]  = (float[])HDFNativeData.byteToFloat(bin);
+        int nelems  = java.lang.reflect.Array.getLength((Object)in);
         Float[] out = new Float[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -683,8 +694,8 @@ public class HDFArray {
 
     private Float[] ByteToFloatObj(int start, int len, byte[] bin)
     {
-        float in[] = (float[]) HDFNativeData.byteToFloat(start, len, bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        float in[]  = (float[])HDFNativeData.byteToFloat(start, len, bin);
+        int nelems  = java.lang.reflect.Array.getLength((Object)in);
         Float[] out = new Float[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -695,7 +706,7 @@ public class HDFArray {
 
     private byte[] DoubleObjToByte(Double in[])
     {
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        int nelems   = java.lang.reflect.Array.getLength((Object)in);
         double[] out = new double[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -706,8 +717,8 @@ public class HDFArray {
 
     private Double[] ByteToDoubleObj(byte[] bin)
     {
-        double in[] = (double[]) HDFNativeData.byteToDouble(bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        double in[]  = (double[])HDFNativeData.byteToDouble(bin);
+        int nelems   = java.lang.reflect.Array.getLength((Object)in);
         Double[] out = new Double[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -718,8 +729,8 @@ public class HDFArray {
 
     private Double[] ByteToDoubleObj(int start, int len, byte[] bin)
     {
-        double in[] = (double[]) HDFNativeData.byteToDouble(start, len, bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        double in[]  = (double[])HDFNativeData.byteToDouble(start, len, bin);
+        int nelems   = java.lang.reflect.Array.getLength((Object)in);
         Double[] out = new Double[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -730,7 +741,7 @@ public class HDFArray {
 
     private byte[] LongObjToByte(Long in[])
     {
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        int nelems = java.lang.reflect.Array.getLength((Object)in);
         long[] out = new long[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -741,8 +752,8 @@ public class HDFArray {
 
     private Long[] ByteToLongObj(byte[] bin)
     {
-        long in[] = (long[]) HDFNativeData.byteToLong(bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        long in[]  = (long[])HDFNativeData.byteToLong(bin);
+        int nelems = java.lang.reflect.Array.getLength((Object)in);
         Long[] out = new Long[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -753,8 +764,8 @@ public class HDFArray {
 
     private Long[] ByteToLongObj(int start, int len, byte[] bin)
     {
-        long in[] = (long[]) HDFNativeData.byteToLong(start, len, bin);
-        int nelems = java.lang.reflect.Array.getLength((Object) in);
+        long in[]  = (long[])HDFNativeData.byteToLong(start, len, bin);
+        int nelems = java.lang.reflect.Array.getLength((Object)in);
         Long[] out = new Long[nelems];
 
         for (int i = 0; i < nelems; i++) {
@@ -770,18 +781,18 @@ public class HDFArray {
  * We use java.lang.reflection here.
  */
 class ArrayDescriptor {
-    static String theType = "";
-    static Class theClass = null;
-    static int[] dimlen = null;
-    static int[] dimstart = null;
+    static String theType     = "";
+    static Class theClass     = null;
+    static int[] dimlen       = null;
+    static int[] dimstart     = null;
     static int[] currentindex = null;
-    static int[] bytetoindex = null;
-    static int totalSize = 0;
-    static int totalElements = 0;
-    static Object[] objs = null;
-    static char NT = ' '; /* must be B,S,I,L,F,D, else error */
-    static int NTsize = 0;
-    static int dims = 0;
+    static int[] bytetoindex  = null;
+    static int totalSize      = 0;
+    static int totalElements  = 0;
+    static Object[] objs      = null;
+    static char NT            = ' '; /* must be B,S,I,L,F,D, else error */
+    static int NTsize         = 0;
+    static int dims           = 0;
     static String className;
 
     public ArrayDescriptor(Object anArray) throws HDF5JavaException
@@ -790,7 +801,7 @@ class ArrayDescriptor {
         if (tc.isArray() == false) {
             /* exception: not an array */
             HDF5JavaException ex = new HDF5JavaException("ArrayDescriptor: not an array?: ");
-            throw (ex);
+            throw(ex);
         }
 
         theClass = tc;
@@ -799,10 +810,10 @@ class ArrayDescriptor {
          * parse the type descriptor to discover the shape of the array
          */
         String ss = tc.toString();
-        theType = ss;
-        int n = 6;
-        dims = 0;
-        char c = ' ';
+        theType   = ss;
+        int n     = 6;
+        dims      = 0;
+        char c    = ' ';
         while (n < ss.length()) {
             c = ss.charAt(n);
             n++;
@@ -811,10 +822,10 @@ class ArrayDescriptor {
             }
         }
 
-        String css = ss.substring(ss.lastIndexOf('[') + 1);
+        String css  = ss.substring(ss.lastIndexOf('[') + 1);
         Class compC = tc.getComponentType();
-        String cs = compC.toString();
-        NT = c; /* must be B,S,I,L,F,D, else error */
+        String cs   = compC.toString();
+        NT          = c; /* must be B,S,I,L,F,D, else error */
         if (NT == 'B') {
             NTsize = 1;
         }
@@ -828,68 +839,69 @@ class ArrayDescriptor {
             NTsize = 8;
         }
         else if (css.startsWith("Ljava.lang.Byte")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.Byte";
-            NTsize = 1;
+            NTsize    = 1;
         }
         else if (css.startsWith("Ljava.lang.Short")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.Short";
-            NTsize = 2;
+            NTsize    = 2;
         }
         else if (css.startsWith("Ljava.lang.Integer")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.Integer";
-            NTsize = 4;
+            NTsize    = 4;
         }
         else if (css.startsWith("Ljava.lang.Float")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.Float";
-            NTsize = 4;
+            NTsize    = 4;
         }
         else if (css.startsWith("Ljava.lang.Double")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.Double";
-            NTsize = 8;
+            NTsize    = 8;
         }
         else if (css.startsWith("Ljava.lang.Long")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.Long";
-            NTsize = 8;
+            NTsize    = 8;
         }
         else if (css.startsWith("Ljava.lang.String")) {
-            NT = 'L';
+            NT        = 'L';
             className = "java.lang.String";
-            NTsize = 1;
-            throw new HDF5JavaException(new String("ArrayDesciptor: Warning:  String array not fully supported yet"));
+            NTsize    = 1;
+            throw new HDF5JavaException(
+                new String("ArrayDesciptor: Warning:  String array not fully supported yet"));
         }
         else {
             /*
              * exception: not a numeric type
              */
             throw new HDF5JavaException(
-                    new String("ArrayDesciptor: Error:  array is not numeric (type is " + css + ") ?"));
+                new String("ArrayDesciptor: Error:  array is not numeric (type is " + css + ") ?"));
         }
 
         /* fill in the table */
-        dimlen = new int[dims + 1];
-        dimstart = new int[dims + 1];
+        dimlen       = new int[dims + 1];
+        dimstart     = new int[dims + 1];
         currentindex = new int[dims + 1];
-        bytetoindex = new int[dims + 1];
-        objs = new Object[dims + 1];
+        bytetoindex  = new int[dims + 1];
+        objs         = new Object[dims + 1];
 
-        Object o = anArray;
-        objs[0] = o;
-        dimlen[0] = 1;
-        dimstart[0] = 0;
+        Object o        = anArray;
+        objs[0]         = o;
+        dimlen[0]       = 1;
+        dimstart[0]     = 0;
         currentindex[0] = 0;
-        int elements = 1;
+        int elements    = 1;
         int i;
         for (i = 1; i <= dims; i++) {
-            dimlen[i] = java.lang.reflect.Array.getLength((Object) o);
-            o = java.lang.reflect.Array.get((Object) o, 0);
-            objs[i] = o;
-            dimstart[i] = 0;
+            dimlen[i]       = java.lang.reflect.Array.getLength((Object)o);
+            o               = java.lang.reflect.Array.get((Object)o, 0);
+            objs[i]         = o;
+            dimstart[i]     = 0;
             currentindex[i] = 0;
             elements *= dimlen[i];
         }
@@ -917,14 +929,15 @@ class ArrayDescriptor {
         System.out.println("Type: " + theType);
         System.out.println("Class: " + theClass);
         System.out.println("NT: " + NT + " NTsize: " + NTsize);
-        System.out.println("Array has " + dims + " dimensions (" + totalSize
-                + " bytes, " + totalElements + " elements)");
+        System.out.println("Array has " + dims + " dimensions (" + totalSize + " bytes, " + totalElements +
+                           " elements)");
         int i;
         for (i = 0; i <= dims; i++) {
-            Class tc = objs[i].getClass();
+            Class tc  = objs[i].getClass();
             String ss = tc.toString();
-            System.out.println(i + ":  start " + dimstart[i] + ": len " + dimlen[i] + " current " + currentindex[i]
-                    + " bytetoindex " + bytetoindex[i] + " object " + objs[i] + " otype " + ss);
+            System.out.println(i + ":  start " + dimstart[i] + ": len " + dimlen[i] + " current " +
+                               currentindex[i] + " bytetoindex " + bytetoindex[i] + " object " + objs[i] +
+                               " otype " + ss);
         }
     }
 }
diff --git a/java/src/hdf/hdf5lib/HDFNativeData.java b/java/src/hdf/hdf5lib/HDFNativeData.java
index 85378db..c497043 100644
--- a/java/src/hdf/hdf5lib/HDFNativeData.java
+++ b/java/src/hdf/hdf5lib/HDFNativeData.java
@@ -95,8 +95,7 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return an array of 'len' int
      */
-    public synchronized static native int[] byteToInt(int start, int len,
-            byte[] data);
+    public synchronized static native int[] byteToInt(int start, int len, byte[] data);
 
     /**
      * Convert 4 bytes from an array of bytes into a single int
@@ -107,9 +106,10 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return The integer value of the bytes.
      */
-    public synchronized static int byteToInt(byte[] data, int start) {
+    public synchronized static int byteToInt(byte[] data, int start)
+    {
         int[] ival = new int[1];
-        ival = byteToInt(start, 1, data);
+        ival       = byteToInt(start, 1, data);
         return (ival[0]);
     }
 
@@ -124,8 +124,7 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return an array of 'len' short
      */
-    public synchronized static native short[] byteToShort(int start, int len,
-            byte[] data);
+    public synchronized static native short[] byteToShort(int start, int len, byte[] data);
 
     /**
      * Convert 2 bytes from an array of bytes into a single short
@@ -136,9 +135,10 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return The short value of the bytes.
      */
-    public synchronized static short byteToShort(byte[] data, int start) {
+    public synchronized static short byteToShort(byte[] data, int start)
+    {
         short[] sval = new short[1];
-        sval = byteToShort(start, 1, data);
+        sval         = byteToShort(start, 1, data);
         return (sval[0]);
     }
 
@@ -164,9 +164,10 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return The float value of the bytes.
      */
-    public synchronized static float byteToFloat(byte[] data, int start) {
+    public synchronized static float byteToFloat(byte[] data, int start)
+    {
         float[] fval = new float[1];
-        fval = byteToFloat(start, 1, data);
+        fval         = byteToFloat(start, 1, data);
         return (fval[0]);
     }
 
@@ -181,8 +182,7 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return an array of 'len' long
      */
-    public synchronized static native long[] byteToLong(int start, int len,
-            byte[] data);
+    public synchronized static native long[] byteToLong(int start, int len, byte[] data);
 
     /**
      * Convert 8 bytes from an array of bytes into a single long
@@ -193,9 +193,10 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return The long value of the bytes.
      */
-    public synchronized static long byteToLong(byte[] data, int start) {
+    public synchronized static long byteToLong(byte[] data, int start)
+    {
         long[] lval = new long[1];
-        lval = byteToLong(start, 1, data);
+        lval        = byteToLong(start, 1, data);
         return (lval[0]);
     }
 
@@ -210,8 +211,7 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return an array of 'len' double
      */
-    public synchronized static native double[] byteToDouble(int start, int len,
-            byte[] data);
+    public synchronized static native double[] byteToDouble(int start, int len, byte[] data);
 
     /**
      * Convert 8 bytes from an array of bytes into a single double
@@ -222,9 +222,10 @@ public class HDFNativeData {
      *            The input array of bytes
      * @return The double value of the bytes.
      */
-    public synchronized static double byteToDouble(byte[] data, int start) {
+    public synchronized static double byteToDouble(byte[] data, int start)
+    {
         double[] dval = new double[1];
-        dval = byteToDouble(start, 1, data);
+        dval          = byteToDouble(start, 1, data);
         return (dval[0]);
     }
 
@@ -239,8 +240,7 @@ public class HDFNativeData {
      *            The input array of int
      * @return an array of bytes
      */
-    public synchronized static native byte[] intToByte(int start, int len,
-            int[] data);
+    public synchronized static native byte[] intToByte(int start, int len, int[] data);
 
     /**
      * Convert a range from an array of short into an array of bytes.
@@ -253,8 +253,7 @@ public class HDFNativeData {
      *            The input array of short
      * @return an array of bytes
      */
-    public synchronized static native byte[] shortToByte(int start, int len,
-            short[] data);
+    public synchronized static native byte[] shortToByte(int start, int len, short[] data);
 
     /**
      * Convert a range from an array of float into an array of bytes.
@@ -267,8 +266,7 @@ public class HDFNativeData {
      *            The input array of float
      * @return an array of bytes
      */
-    public synchronized static native byte[] floatToByte(int start, int len,
-            float[] data);
+    public synchronized static native byte[] floatToByte(int start, int len, float[] data);
 
     /**
      * Convert a range from an array of long into an array of bytes.
@@ -281,8 +279,7 @@ public class HDFNativeData {
      *            The input array of long
      * @return an array of bytes
      */
-    public synchronized static native byte[] longToByte(int start, int len,
-            long[] data);
+    public synchronized static native byte[] longToByte(int start, int len, long[] data);
 
     /**
      * Convert a range from an array of double into an array of bytes.
@@ -295,8 +292,7 @@ public class HDFNativeData {
      *            The input array of double
      * @return an array of bytes
      */
-    public synchronized static native byte[] doubleToByte(int start, int len,
-            double[] data);
+    public synchronized static native byte[] doubleToByte(int start, int len, double[] data);
 
     /**
      * Convert a single byte into an array of one byte.
@@ -318,9 +314,7 @@ public class HDFNativeData {
      *            The input Byte
      * @return an array of bytes
      */
-    public synchronized static byte[] byteToByte(Byte data) {
-        return byteToByte(data.byteValue());
-    }
+    public synchronized static byte[] byteToByte(Byte data) { return byteToByte(data.byteValue()); }
 
     /**
      * Convert a single int into an array of 4 bytes.
@@ -338,9 +332,7 @@ public class HDFNativeData {
      *            The input Integer
      * @return an array of bytes
      */
-    public synchronized static byte[] intToByte(Integer data) {
-        return intToByte(data.intValue());
-    }
+    public synchronized static byte[] intToByte(Integer data) { return intToByte(data.intValue()); }
 
     /**
      * Convert a single short into an array of 2 bytes.
@@ -358,9 +350,7 @@ public class HDFNativeData {
      *            The input Short
      * @return an array of bytes
      */
-    public synchronized static byte[] shortToByte(Short data) {
-        return shortToByte(data.shortValue());
-    }
+    public synchronized static byte[] shortToByte(Short data) { return shortToByte(data.shortValue()); }
 
     /**
      * Convert a single float into an array of 4 bytes.
@@ -378,9 +368,7 @@ public class HDFNativeData {
      *            The input Float
      * @return an array of bytes
      */
-    public synchronized static byte[] floatToByte(Float data) {
-        return floatToByte(data.floatValue());
-    };
+    public synchronized static byte[] floatToByte(Float data) { return floatToByte(data.floatValue()); };
 
     /**
      * Convert a single long into an array of 8 bytes.
@@ -398,9 +386,7 @@ public class HDFNativeData {
      *            The input Long
      * @return an array of bytes
      */
-    public synchronized static byte[] longToByte(Long data) {
-        return longToByte(data.longValue());
-    }
+    public synchronized static byte[] longToByte(Long data) { return longToByte(data.longValue()); }
 
     /**
      * Convert a single double into an array of 8 bytes.
@@ -418,9 +404,7 @@ public class HDFNativeData {
      *            The input Double
      * @return an array of bytes
      */
-    public synchronized static byte[] doubleToByte(Double data) {
-        return doubleToByte(data.doubleValue());
-    }
+    public synchronized static byte[] doubleToByte(Double data) { return doubleToByte(data.doubleValue()); }
 
     /**
      * Create a Number object from an array of bytes.
@@ -435,40 +419,39 @@ public class HDFNativeData {
      * @exception HDF5Exception
      *                - Error unsupported type.
      */
-    public synchronized static Object byteToNumber(byte[] barray, Object obj)
-            throws HDF5Exception
+    public synchronized static Object byteToNumber(byte[] barray, Object obj) throws HDF5Exception
     {
         Class theClass = obj.getClass();
-        String type = theClass.getName();
-        Object retobj = null;
+        String type    = theClass.getName();
+        Object retobj  = null;
 
         if (type.equals("java.lang.Integer")) {
             int[] i = hdf.hdf5lib.HDFNativeData.byteToInt(0, 1, barray);
-            retobj = Integer.valueOf(i[0]);
+            retobj  = Integer.valueOf(i[0]);
         }
         else if (type.equals("java.lang.Byte")) {
             retobj = Byte.valueOf(barray[0]);
         }
         else if (type.equals("java.lang.Short")) {
             short[] f = hdf.hdf5lib.HDFNativeData.byteToShort(0, 1, barray);
-            retobj = Short.valueOf(f[0]);
+            retobj    = Short.valueOf(f[0]);
         }
         else if (type.equals("java.lang.Float")) {
             float[] f = hdf.hdf5lib.HDFNativeData.byteToFloat(0, 1, barray);
-            retobj = Float.valueOf(f[0]);
+            retobj    = Float.valueOf(f[0]);
         }
         else if (type.equals("java.lang.Long")) {
             long[] f = hdf.hdf5lib.HDFNativeData.byteToLong(0, 1, barray);
-            retobj = Long.valueOf(f[0]);
+            retobj   = Long.valueOf(f[0]);
         }
         else if (type.equals("java.lang.Double")) {
             double[] f = hdf.hdf5lib.HDFNativeData.byteToDouble(0, 1, barray);
-            retobj = Double.valueOf(f[0]);
+            retobj     = Double.valueOf(f[0]);
         }
         else {
             /* exception: unsupported type */
             HDF5Exception ex = new HDF5JavaException("byteToNumber: setfield bad type: " + obj + " " + type);
-            throw (ex);
+            throw(ex);
         }
         return (retobj);
     }
diff --git a/java/src/hdf/hdf5lib/callbacks/Callbacks.java b/java/src/hdf/hdf5lib/callbacks/Callbacks.java
index 11fa465..86d6193 100644
--- a/java/src/hdf/hdf5lib/callbacks/Callbacks.java
+++ b/java/src/hdf/hdf5lib/callbacks/Callbacks.java
@@ -12,7 +12,8 @@
 
 package hdf.hdf5lib.callbacks;
 
-/** All callback definitions must derive from this interface.  Any
+/**
+ * All callback definitions must derive from this interface.  Any
  * derived interfaces must define a single public method  named "callback".
  * You are responsible for deregistering your callback (if necessary)
  * in its {@link Object#finalize} method.  If native code attempts to call
@@ -26,5 +27,4 @@ package hdf.hdf5lib.callbacks;
  * handler.
  */
 public interface Callbacks {
-
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5A_iterate_t.java b/java/src/hdf/hdf5lib/callbacks/H5A_iterate_t.java
index d612db3..45bde9a 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5A_iterate_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5A_iterate_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5A_iterate_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5D_append_t.java b/java/src/hdf/hdf5lib/callbacks/H5D_append_t.java
index 7fdb454..cb17896 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5D_append_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5D_append_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5D_append_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5D_iterate_t.java b/java/src/hdf/hdf5lib/callbacks/H5D_iterate_t.java
index 305cf98..fb48c73 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5D_iterate_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5D_iterate_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5D_iterate_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5E_walk_t.java b/java/src/hdf/hdf5lib/callbacks/H5E_walk_t.java
index 5bf0c8b..131b33f 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5E_walk_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5E_walk_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5E_walk_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5L_iterate_opdata_t.java b/java/src/hdf/hdf5lib/callbacks/H5L_iterate_opdata_t.java
index d89fd2a..c657dbc 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5L_iterate_opdata_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5L_iterate_opdata_t.java
@@ -17,5 +17,4 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5L_iterate_opdata_t {
-
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5O_iterate_opdata_t.java b/java/src/hdf/hdf5lib/callbacks/H5O_iterate_opdata_t.java
index fd643b4..f4a4412 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5O_iterate_opdata_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5O_iterate_opdata_t.java
@@ -17,5 +17,4 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5O_iterate_opdata_t {
-
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_t.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_t.java
index 11e3a99..059addf 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5P_cls_close_func_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_t.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_t.java
index 78e5282..4b7cf11 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5P_cls_copy_func_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_t.java b/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_t.java
index d919d97..917264d 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5P_cls_create_func_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/H5P_iterate_t.java b/java/src/hdf/hdf5lib/callbacks/H5P_iterate_t.java
index 0035619..9c0d0eb 100644
--- a/java/src/hdf/hdf5lib/callbacks/H5P_iterate_t.java
+++ b/java/src/hdf/hdf5lib/callbacks/H5P_iterate_t.java
@@ -17,7 +17,8 @@ package hdf.hdf5lib.callbacks;
  *
  */
 public interface H5P_iterate_t {
-/**    public ArrayList iterdata = new ArrayList();
-  * Any derived interfaces must define the single public variable as above.
-  */
+    /**
+     * public ArrayList iterdata = new ArrayList();
+     * Any derived interfaces must define the single public variable as above.
+     */
 }
diff --git a/java/src/hdf/hdf5lib/callbacks/package-info.java b/java/src/hdf/hdf5lib/callbacks/package-info.java
index 0833162..114045c 100644
--- a/java/src/hdf/hdf5lib/callbacks/package-info.java
+++ b/java/src/hdf/hdf5lib/callbacks/package-info.java
@@ -11,7 +11,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-/** All callback definitions must derive from the Callbacks interface.  Any
+/**
+ * All callback definitions must derive from the Callbacks interface.  Any
  * derived interfaces must define a single public method named "callback".
  * You are responsible for deregistering your callback (if necessary)
  * in its {@link Object#finalize} method.  If native code attempts to call
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java b/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
index 86dad88..4cb7b1d 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java
@@ -23,9 +23,7 @@ public class HDF5AttributeException extends HDF5LibraryException {
      * Constructs an HDF5AttributeException with no specified
      * detail message.
      */
-    public HDF5AttributeException() {
-        super();
-    }
+    public HDF5AttributeException() { super(); }
 
     /**
      * Constructs an HDF5AttributeException with the specified
@@ -34,7 +32,5 @@ public class HDF5AttributeException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5AttributeException(String s) {
-        super(s);
-    }
+    public HDF5AttributeException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java b/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
index 97585d3..9f70456 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java
@@ -23,9 +23,7 @@ public class HDF5BtreeException extends HDF5LibraryException {
      * Constructs an HDF5BtreeException with no specified detail
      * message.
      */
-    public HDF5BtreeException() {
-        super();
-    }
+    public HDF5BtreeException() { super(); }
 
     /**
      * Constructs an HDF5BtreeException with the specified detail
@@ -34,7 +32,5 @@ public class HDF5BtreeException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5BtreeException(String s) {
-        super(s);
-    }
+    public HDF5BtreeException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
index b02d815..b4397b7 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java
@@ -23,9 +23,7 @@ public class HDF5DataFiltersException extends HDF5LibraryException {
      * Constructs an HDF5DataFiltersException with no specified
      * detail message.
      */
-    public HDF5DataFiltersException() {
-        super();
-    }
+    public HDF5DataFiltersException() { super(); }
 
     /**
      * Constructs an HDF5DataFiltersException with the specified
@@ -34,7 +32,5 @@ public class HDF5DataFiltersException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5DataFiltersException(String s) {
-        super(s);
-    }
+    public HDF5DataFiltersException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
index 416b06a..f6993a8 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java
@@ -24,9 +24,7 @@ public class HDF5DataStorageException extends HDF5LibraryException {
      * Constructs an HDF5DataStorageExceptionn with no specified
      * detail message.
      */
-    public HDF5DataStorageException() {
-        super();
-    }
+    public HDF5DataStorageException() { super(); }
 
     /**
      * Constructs an HDF5DataStorageException with the specified
@@ -35,7 +33,5 @@ public class HDF5DataStorageException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5DataStorageException(String s) {
-        super(s);
-    }
+    public HDF5DataStorageException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
index 7bb22fa..8fd4ae9 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java
@@ -23,9 +23,7 @@ public class HDF5DatasetInterfaceException extends HDF5LibraryException {
      * Constructs an HDF5DatasetInterfaceException with no
      * specified detail message.
      */
-    public HDF5DatasetInterfaceException() {
-        super();
-    }
+    public HDF5DatasetInterfaceException() { super(); }
 
     /**
      * Constructs an HDF5DatasetInterfaceException with the
@@ -34,7 +32,5 @@ public class HDF5DatasetInterfaceException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5DatasetInterfaceException(String s) {
-        super(s);
-    }
+    public HDF5DatasetInterfaceException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
index 9a85ff0..d0d2a09 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java
@@ -24,9 +24,7 @@ public class HDF5DataspaceInterfaceException extends HDF5LibraryException {
      * Constructs an HDF5DataspaceInterfaceException with no
      * specified detail message.
      */
-    public HDF5DataspaceInterfaceException() {
-        super();
-    }
+    public HDF5DataspaceInterfaceException() { super(); }
 
     /**
      * Constructs an HDF5DataspaceInterfaceException with the
@@ -35,7 +33,5 @@ public class HDF5DataspaceInterfaceException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5DataspaceInterfaceException(String s) {
-        super(s);
-    }
+    public HDF5DataspaceInterfaceException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
index 45b0c55..2ab4ff9 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java
@@ -24,9 +24,7 @@ public class HDF5DatatypeInterfaceException extends HDF5LibraryException {
      * Constructs an HDF5DatatypeInterfaceException with no
      * specified detail message.
      */
-    public HDF5DatatypeInterfaceException() {
-        super();
-    }
+    public HDF5DatatypeInterfaceException() { super(); }
 
     /**
      * Constructs an HDF5DatatypeInterfaceException with the
@@ -35,7 +33,5 @@ public class HDF5DatatypeInterfaceException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5DatatypeInterfaceException(String s) {
-        super(s);
-    }
+    public HDF5DatatypeInterfaceException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java b/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
index 0c23af1..b098a12 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5Exception.java
@@ -40,9 +40,7 @@ public class HDF5Exception extends RuntimeException {
      * Constructs an HDF5Exception with no specified detail
      * message.
      */
-    public HDF5Exception() {
-        super();
-    }
+    public HDF5Exception() { super(); }
 
     /**
      * Constructs an HDF5Exception with the specified detail
@@ -51,7 +49,8 @@ public class HDF5Exception extends RuntimeException {
      * @param message
      *            the detail message.
      */
-    public HDF5Exception(String message) {
+    public HDF5Exception(String message)
+    {
         super();
         detailMessage = message;
     }
@@ -63,7 +62,8 @@ public class HDF5Exception extends RuntimeException {
      *         have a detail message.
      */
     @Override
-    public String getMessage() {
+    public String getMessage()
+    {
         return detailMessage;
     }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
index 73bf069..c8df3d0 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java
@@ -24,9 +24,7 @@ public class HDF5ExternalFileListException extends HDF5LibraryException {
      * Constructs an HDF5ExternalFileListException with no
      * specified detail message.
      */
-    public HDF5ExternalFileListException() {
-        super();
-    }
+    public HDF5ExternalFileListException() { super(); }
 
     /**
      * Constructs an HDF5ExternalFileListException with the
@@ -35,7 +33,5 @@ public class HDF5ExternalFileListException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5ExternalFileListException(String s) {
-        super(s);
-    }
+    public HDF5ExternalFileListException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
index ac82258..afd6d69 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java
@@ -24,9 +24,7 @@ public class HDF5FileInterfaceException extends HDF5LibraryException {
      * Constructs an HDF5FileInterfaceException with no specified
      * detail message.
      */
-    public HDF5FileInterfaceException() {
-        super();
-    }
+    public HDF5FileInterfaceException() { super(); }
 
     /**
      * Constructs an HDF5FileInterfaceException with the specified
@@ -35,7 +33,5 @@ public class HDF5FileInterfaceException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5FileInterfaceException(String s) {
-        super(s);
-    }
+    public HDF5FileInterfaceException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
index c4fcf30..58e2980 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java
@@ -24,9 +24,7 @@ public class HDF5FunctionArgumentException extends HDF5LibraryException {
      * Constructs an HDF5FunctionArgumentException with no
      * specified detail message.
      */
-    public HDF5FunctionArgumentException() {
-        super();
-    }
+    public HDF5FunctionArgumentException() { super(); }
 
     /**
      * Constructs an HDF5FunctionArgumentException with the
@@ -35,7 +33,5 @@ public class HDF5FunctionArgumentException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5FunctionArgumentException(String s) {
-        super(s);
-    }
+    public HDF5FunctionArgumentException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
index ee34b59..db46aae 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java
@@ -24,9 +24,7 @@ public class HDF5FunctionEntryExitException extends HDF5LibraryException {
      * Constructs an HDF5FunctionEntryExitException with no
      * specified detail message.
      */
-    public HDF5FunctionEntryExitException() {
-        super();
-    }
+    public HDF5FunctionEntryExitException() { super(); }
 
     /**
      * Constructs an HDF5FunctionEntryExitException with the
@@ -35,7 +33,5 @@ public class HDF5FunctionEntryExitException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5FunctionEntryExitException(String s) {
-        super(s);
-    }
+    public HDF5FunctionEntryExitException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java b/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
index 1bb3251..7f1691d 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java
@@ -24,9 +24,7 @@ public class HDF5HeapException extends HDF5LibraryException {
      * Constructs an HDF5HeapException with no specified detail
      * message.
      */
-    public HDF5HeapException() {
-        super();
-    }
+    public HDF5HeapException() { super(); }
 
     /**
      * Constructs an HDF5HeapException with the specified detail
@@ -35,7 +33,5 @@ public class HDF5HeapException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5HeapException(String s) {
-        super(s);
-    }
+    public HDF5HeapException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5IdException.java b/java/src/hdf/hdf5lib/exceptions/HDF5IdException.java
index 04ee0bc..5ce1f01 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5IdException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5IdException.java
@@ -24,9 +24,7 @@ public class HDF5IdException extends HDF5LibraryException {
      * Constructs an HDF5IdException with no specified detail
      * message.
      */
-    public HDF5IdException() {
-        super();
-    }
+    public HDF5IdException() { super(); }
 
     /**
      * Constructs an HDF5IdException with the specified detail
@@ -35,8 +33,5 @@ public class HDF5IdException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5IdException(String s) {
-        super(s);
-    }
-
+    public HDF5IdException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java b/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
index 810c126..4489486 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java
@@ -24,9 +24,7 @@ public class HDF5InternalErrorException extends HDF5LibraryException {
      * Constructs an HDF5InternalErrorException with no specified
      * detail message.
      */
-    public HDF5InternalErrorException() {
-        super();
-    }
+    public HDF5InternalErrorException() { super(); }
 
     /**
      * Constructs an HDF5InternalErrorException with the specified
@@ -35,7 +33,5 @@ public class HDF5InternalErrorException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5InternalErrorException(String s) {
-        super(s);
-    }
+    public HDF5InternalErrorException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java b/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
index 35720da..ae1cf85 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java
@@ -26,9 +26,7 @@ public class HDF5JavaException extends HDF5Exception {
      * Constructs an HDF5JavaException with no specified detail
      * message.
      */
-    public HDF5JavaException() {
-        super();
-    }
+    public HDF5JavaException() { super(); }
 
     /**
      * Constructs an HDF5JavaException with the specified detail
@@ -37,7 +35,5 @@ public class HDF5JavaException extends HDF5Exception {
      * @param s
      *            the detail message.
      */
-    public HDF5JavaException(String s) {
-        super(s);
-    }
+    public HDF5JavaException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java b/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
index 9f94882..2a4c8c7 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java
@@ -39,7 +39,8 @@ public class HDF5LibraryException extends HDF5Exception {
      * Constructs an HDF5LibraryException with no specified detail
      * message.
      */
-    public HDF5LibraryException() {
+    public HDF5LibraryException()
+    {
         super();
 
         // this code forces the loading of the HDF-5 library
@@ -52,7 +53,7 @@ public class HDF5LibraryException extends HDF5Exception {
 
         this.majorErrorNumber = _getMajorErrorNumber();
         this.minorErrorNumber = _getMinorErrorNumber();
-        detailMessage = getMinorError(minorErrorNumber);
+        detailMessage         = getMinorError(minorErrorNumber);
     }
 
     /**
@@ -62,7 +63,8 @@ public class HDF5LibraryException extends HDF5Exception {
      * @param s
      *            the detail message.
      */
-    public HDF5LibraryException(String s) {
+    public HDF5LibraryException(String s)
+    {
         super(s);
         // this code forces the loading of the HDF-5 library
         // to assure that the native methods are available
@@ -81,10 +83,7 @@ public class HDF5LibraryException extends HDF5Exception {
      *
      * @return the major error number
      */
-    public long getMajorErrorNumber()
-    {
-        return majorErrorNumber;
-    }
+    public long getMajorErrorNumber() { return majorErrorNumber; }
     private native long _getMajorErrorNumber();
 
     /**
@@ -93,10 +92,7 @@ public class HDF5LibraryException extends HDF5Exception {
      *
      * @return the minor error number
      */
-    public long getMinorErrorNumber()
-    {
-        return minorErrorNumber;
-    }
+    public long getMinorErrorNumber() { return minorErrorNumber; }
     private native long _getMinorErrorNumber();
 
     /**
@@ -109,7 +105,8 @@ public class HDF5LibraryException extends HDF5Exception {
      *
      * @return the string of the minor error
      */
-    public String getMinorError(long err_code) {
+    public String getMinorError(long err_code)
+    {
         if (err_code == 0) {
             return "special zero no error";
         }
@@ -356,9 +353,10 @@ public class HDF5LibraryException extends HDF5Exception {
      * stack, and and the Java stack trace to the standard error stream.
      */
     @Override
-    public void printStackTrace() {
+    public void printStackTrace()
+    {
         System.err.println(this);
-        printStackTrace0(null); // the HDF-5 Library error stack
+        printStackTrace0(null);  // the HDF-5 Library error stack
         super.printStackTrace(); // the Java stack trace
     }
 
@@ -369,21 +367,21 @@ public class HDF5LibraryException extends HDF5Exception {
      * @param f
      *            the file print stream.
      */
-    public void printStackTrace(java.io.File f) {
+    public void printStackTrace(java.io.File f)
+    {
         if ((f == null) || !f.exists() || f.isDirectory() || !f.canWrite()) {
             printStackTrace();
         }
         else {
             try {
                 java.io.FileOutputStream o = new java.io.FileOutputStream(f);
-                java.io.PrintWriter p = new java.io.PrintWriter(o);
+                java.io.PrintWriter p      = new java.io.PrintWriter(o);
                 p.println(this);
                 p.close();
             }
             catch (Exception ex) {
                 System.err.println(this);
-            }
-            ;
+            };
             // the HDF-5 Library error stack
             printStackTrace0(f.getPath());
             super.printStackTrace(); // the Java stack trace
@@ -395,5 +393,4 @@ public class HDF5LibraryException extends HDF5Exception {
      * and error stack.
      */
     private native void printStackTrace0(String s);
-
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java b/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
index d61f4e9..fef5721 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java
@@ -24,9 +24,7 @@ public class HDF5LowLevelIOException extends HDF5LibraryException {
      * Constructs an HDF5LowLevelIOException with no specified
      * detail message.
      */
-    public HDF5LowLevelIOException() {
-        super();
-    }
+    public HDF5LowLevelIOException() { super(); }
 
     /**
      * Constructs an HDF5LowLevelIOException with the specified
@@ -35,7 +33,5 @@ public class HDF5LowLevelIOException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5LowLevelIOException(String s) {
-        super(s);
-    }
+    public HDF5LowLevelIOException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java b/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
index 3b64b15..4f00006 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java
@@ -24,9 +24,7 @@ public class HDF5MetaDataCacheException extends HDF5LibraryException {
      * Constructs an HDF5MetaDataCacheException with no specified
      * detail message.
      */
-    public HDF5MetaDataCacheException() {
-        super();
-    }
+    public HDF5MetaDataCacheException() { super(); }
 
     /**
      * Constructs an HDF5MetaDataCacheException with the specified
@@ -35,7 +33,5 @@ public class HDF5MetaDataCacheException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5MetaDataCacheException(String s) {
-        super(s);
-    }
+    public HDF5MetaDataCacheException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
index b9f40f8..9675354 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java
@@ -24,9 +24,7 @@ public class HDF5ObjectHeaderException extends HDF5LibraryException {
      * Constructs an HDF5ObjectHeaderException with no specified
      * detail message.
      */
-    public HDF5ObjectHeaderException() {
-        super();
-    }
+    public HDF5ObjectHeaderException() { super(); }
 
     /**
      * Constructs an HDF5ObjectHeaderException with the specified
@@ -35,7 +33,5 @@ public class HDF5ObjectHeaderException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5ObjectHeaderException(String s) {
-        super(s);
-    }
+    public HDF5ObjectHeaderException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
index d2a20e0..66f0bd1 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java
@@ -24,9 +24,7 @@ public class HDF5PropertyListInterfaceException extends HDF5LibraryException {
      * Constructs an HDF5PropertyListInterfaceException with no
      * specified detail message.
      */
-    public HDF5PropertyListInterfaceException() {
-        super();
-    }
+    public HDF5PropertyListInterfaceException() { super(); }
 
     /**
      * Constructs an HDF5PropertyListInterfaceException with the
@@ -35,7 +33,5 @@ public class HDF5PropertyListInterfaceException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5PropertyListInterfaceException(String s) {
-        super(s);
-    }
+    public HDF5PropertyListInterfaceException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
index 0701244..4feaba7 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java
@@ -24,9 +24,7 @@ public class HDF5ReferenceException extends HDF5LibraryException {
      * Constructs an HDF5ReferenceException with no specified
      * detail message.
      */
-    public HDF5ReferenceException() {
-        super();
-    }
+    public HDF5ReferenceException() { super(); }
 
     /**
      * Constructs an HDF5ReferenceException with the specified
@@ -35,7 +33,5 @@ public class HDF5ReferenceException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5ReferenceException(String s) {
-        super(s);
-    }
+    public HDF5ReferenceException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java b/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
index ad052b5..1a007e7 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java
@@ -24,9 +24,7 @@ public class HDF5ResourceUnavailableException extends HDF5LibraryException {
      * Constructs an HDF5ResourceUnavailableException with no
      * specified detail message.
      */
-    public HDF5ResourceUnavailableException() {
-        super();
-    }
+    public HDF5ResourceUnavailableException() { super(); }
 
     /**
      * Constructs an HDF5FunctionArgumentException with the
@@ -35,7 +33,5 @@ public class HDF5ResourceUnavailableException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5ResourceUnavailableException(String s) {
-        super(s);
-    }
+    public HDF5ResourceUnavailableException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java b/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
index ba9150f..4fb8c2e 100644
--- a/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
+++ b/java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java
@@ -24,9 +24,7 @@ public class HDF5SymbolTableException extends HDF5LibraryException {
      * Constructs an HDF5SymbolTableException with no specified
      * detail message.
      */
-    public HDF5SymbolTableException() {
-        super();
-    }
+    public HDF5SymbolTableException() { super(); }
 
     /**
      * Constructs an HDF5SymbolTableException with the specified
@@ -35,7 +33,5 @@ public class HDF5SymbolTableException extends HDF5LibraryException {
      * @param s
      *            the detail message.
      */
-    public HDF5SymbolTableException(String s) {
-        super(s);
-    }
+    public HDF5SymbolTableException(String s) { super(s); }
 }
diff --git a/java/src/hdf/hdf5lib/package-info.java b/java/src/hdf/hdf5lib/package-info.java
index 2863f5a..c04b862 100644
--- a/java/src/hdf/hdf5lib/package-info.java
+++ b/java/src/hdf/hdf5lib/package-info.java
@@ -11,11 +11,11 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-
 /**
  * This package is the Java interface for the HDF5 library.
  * 
    
- * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps a single
+ * This code is the called by Java programs to access the entry points of the HDF5 library. Each routine wraps
+ a single
  * HDF5 entry point, generally with the arguments and return codes analogous to the C interface.
  * 
    
  * For details of the HDF5 library, see the HDF5 Documentation at:
@@ -25,7 +25,8 @@
  * Mapping of arguments for Java
  *
  * 
    
- * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in the HDF
+ * In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in
+ the HDF
  * Reference Manual.
  *
  * 
@@ -66,16 +67,21 @@
  * 
    
  * General Rules for Passing Arguments and Results
  * 
    
- * In general, arguments passed IN to Java are the analogous basic types, as above. The exception is for arrays,
+ * In general, arguments passed IN to Java are the analogous basic types, as above. The exception is
+ for arrays,
  * which are discussed below.
  * 
    
- * The return value of Java methods is also the analogous type, as above. A major exception to that rule is that
- * all HDF functions that return SUCCEED/FAIL are declared boolean in the Java version, rather than int as
- * in the C. Functions that return a value or else FAIL are declared the equivalent to the C function. However, in most
+ * The return value of Java methods is also the analogous type, as above. A major exception to that
+ rule is that
+ * all HDF functions that return SUCCEED/FAIL are declared boolean in the Java version, rather than
+ int as
+ * in the C. Functions that return a value or else FAIL are declared the equivalent to the C function.
+ However, in most
  * cases the Java method will raise an exception instead of returning an error code.
  * See Errors and Exceptions below.
  * 
    
- * Java does not support pass by reference of arguments, so arguments that are returned through OUT parameters
+ * Java does not support pass by reference of arguments, so arguments that are returned through OUT
+ parameters
  * must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in arrays.
  * 
    
  * For instance, a function that returns two integers is declared:
@@ -97,11 +103,13 @@
  * 
    
  *
  * 
    
- * All the routines where this convention is used will have specific documentation of the details, given below.
+ * All the routines where this convention is used will have specific documentation of the details, given
+ below.
  * 
    
  * Arrays
  * 
    
- * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API describes the
+ * HDF5 needs to read and write multi-dimensional arrays of any number type (and records). The HDF5 API
+ describes the
  * layout of the source and destination, and the data for the array passed as a block of bytes, for instance,
  *
  * 
    @@ -109,39 +117,53 @@
  * 
    
  *
  * 
    
- * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that is the
- * data for a multi-dimensional array. The other parameters describe the dimensions, rank, and datatype of the array on
+ * where ``void *'' means that the data may be any valid numeric type, and is a contiguous block of bytes that
+ is the
+ * data for a multi-dimensional array. The other parameters describe the dimensions, rank, and datatype of the
+ array on
  * disk (source) and in memory (destination).
  * 
    
- * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore, multidimensional
- * arrays are definitely not laid out contiguously in memory. It would be infeasible to declare a separate
+ * For Java, this ``ANY'' is a problem, as the type of data must always be declared. Furthermore,
+ multidimensional
+ * arrays are definitely not laid out contiguously in memory. It would be infeasible to declare a
+ separate
  * routine for every combination of number type and dimensionality. For that reason, the
- *  HDFArray class is used to discover the type, shape, and size of the
- * data array at run time, and to convert to and from a contiguous array of bytes in synchronized static native C order.
- * 
    
- * The upshot is that any Java array of numbers (either primitive or sub-classes of type Number) can be passed as
- * an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes needed by the C
+ *  HDFArray class is used to discover the type, shape, and
+ size of the
+ * data array at run time, and to convert to and from a contiguous array of bytes in synchronized static
+ native C order.
+ * 
    
+ * The upshot is that any Java array of numbers (either primitive or sub-classes of type Number) can be
+ passed as
+ * an ``Object'', and the Java API will translate to and from the appropriate packed array of bytes needed by
+ the C
  * library. So the function above would be declared:
  *
  * 
    - * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace, Object data);
+ * public synchronized static native int H5Dread(long fid, long filetype, long memtype, long memspace, Object
+ data);
  * 
    
  *            OPEN_IDS.addElement(id);
 
- * and the parameter data can be any multi-dimensional array of numbers, such as float[][], or int[][][], or
+ * and the parameter data can be any multi-dimensional array of numbers, such as float[][], or
+ int[][][], or
  * Double[][].
  * 
    
  * HDF-5 Constants
  * 
    
- * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java programs
- * via the class  HDF5Constants. For example, the parameters for
+ * The HDF-5 API defines a set of constants and enumerated values. Most of these values are available to Java
+ programs
+ * via the class  HDF5Constants. For example, the
+ parameters for
  * the h5open() call include two numeric values, HDFConstants.H5F_ACC_RDWR and
  * HDF5Constants.H5P_DEFAULT. As would be expected, these numbers correspond to the C constants
  * H5F_ACC_RDWR and H5P_DEFAULT.
  * 
    
- * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and "hsize_t".
+ * The HDF-5 API defines a set of values that describe number types and sizes, such as "H5T_NATIVE_INT" and
+ "hsize_t".
  * These values are determined at run time by the HDF-5 C library. To support these parameters, the Java class
- *  HDF5CDataTypes looks up the values when initiated. The values
+ *  HDF5CDataTypes looks up the values when initiated.
+ The values
  * can be accessed as public variables of the Java class, such as:
  *
  * 
    @@ -153,22 +175,31 @@
  * 
    
  * Error handling and Exceptions
  * 
    
- * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is available from the
- * JHI5. Errors are converted into Java exceptions. This is totally different from the C interface, but is very natural
+ * The HDF5 error API (H5E) manages the behavior of the error stack in the HDF-5 library. This API is
+ available from the
+ * JHI5. Errors are converted into Java exceptions. This is totally different from the C interface, but is
+ very natural
  * for Java programming.
  * 
    
  * The exceptions of the JHI5 are organized as sub-classes of the class
- *  HDF5Exception. There are two subclasses of
- * HDF5Exception,  HDF5LibraryException
- * and  HDF5JavaException. The sub-classes of the
- * former represent errors from the HDF-5 C library, while sub-classes of the latter represent errors in the JHI5
+ *  HDF5Exception. There are two subclasses
+ of
+ * HDF5Exception, 
+ HDF5LibraryException
+ * and  HDF5JavaException. The
+ sub-classes of the
+ * former represent errors from the HDF-5 C library, while sub-classes of the latter represent errors in the
+ JHI5
  * wrapper and support code.
  * 
    
- * The super-class HDF5LibraryException implements the method 'printStackTrace()', which
- * prints out the HDF-5 error stack, as described in the HDF-5 C API H5Eprint(). This may be used by Java
+ * The super-class HDF5LibraryException implements the method 'printStackTrace()',
+ which
+ * prints out the HDF-5 error stack, as described in the HDF-5 C API H5Eprint(). This may be
+ used by Java
  * exception handlers to print out the HDF-5 error stack.
  * 
    
  *
  * See also:  http://hdfgroup.org/HDF5"
- **/
+ *
+ */
 package hdf.hdf5lib;
diff --git a/java/src/hdf/hdf5lib/structs/H5AC_cache_config_t.java b/java/src/hdf/hdf5lib/structs/H5AC_cache_config_t.java
index cf84532..a224124 100644
--- a/java/src/hdf/hdf5lib/structs/H5AC_cache_config_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5AC_cache_config_t.java
@@ -18,7 +18,7 @@ import java.io.Serializable;
  * Information struct for H5Pget_mdc_config/H5Pset_mdc_config
  *
  */
-public class H5AC_cache_config_t implements Serializable{
+public class H5AC_cache_config_t implements Serializable {
     private static final long serialVersionUID = -6748085696476149972L;
     // general configuration fields
     /**
@@ -27,7 +27,7 @@ public class H5AC_cache_config_t implements Serializable{
      *      H5AC_cache_config_t passed to the cache must have a known
      *      version number, or an error will be flagged.
      */
-    public int              version;
+    public int version;
     /**
      * rpt_fcn_enabled: Boolean field used to enable and disable the default
      *    reporting function.  This function is invoked every time the
@@ -35,80 +35,80 @@ public class H5AC_cache_config_t implements Serializable{
      *
      *    This is a debugging function, and should normally be turned off.
      */
-    public boolean          rpt_fcn_enabled;
+    public boolean rpt_fcn_enabled;
     /**
      * open_trace_file: Boolean field indicating whether the trace_file_name
      *     field should be used to open a trace file for the cache.
      *
      *      *** DEPRECATED *** Use H5Fstart/stop logging functions instead
      */
-    public boolean          open_trace_file;
+    public boolean open_trace_file;
     /**
      * close_trace_file: Boolean field indicating whether the current trace
      *     file (if any) should be closed.
      *
      *      *** DEPRECATED *** Use H5Fstart/stop logging functions instead
      */
-    public boolean          close_trace_file;
+    public boolean close_trace_file;
     /**
      * trace_file_name: Full path of the trace file to be opened if the
      *     open_trace_file field is TRUE.
      *
      *      *** DEPRECATED *** Use H5Fstart/stop logging functions instead
      */
-    public String           trace_file_name;
+    public String trace_file_name;
     /**
      * evictions_enabled:  Boolean field used to either report the current
      *     evictions enabled status of the cache, or to set the cache's
      *    evictions enabled status.
      */
-    public boolean          evictions_enabled;
+    public boolean evictions_enabled;
     /**
      * set_initial_size: Boolean flag indicating whether the size of the
      *      initial size of the cache is to be set to the value given in
      *      the initial_size field.  If set_initial_size is FALSE, the
      *      initial_size field is ignored.
      */
-    public boolean          set_initial_size;
+    public boolean set_initial_size;
     /**
      * initial_size: If enabled, this field contain the size the cache is
      *      to be set to upon receipt of this structure.  Needless to say,
      *      initial_size must lie in the closed interval [min_size, max_size].
      */
-    public long             initial_size;
+    public long initial_size;
     /**
      * min_clean_fraction: double in the range 0 to 1 indicating the fraction
      *      of the cache that is to be kept clean.  This field is only used
      *      in parallel mode.  Typical values are 0.1 to 0.5.
      */
-    public double           min_clean_fraction;
+    public double min_clean_fraction;
     /**
      * max_size: Maximum size to which the cache can be adjusted.  The
      *      supplied value must fall in the closed interval
      *      [MIN_MAX_CACHE_SIZE, MAX_MAX_CACHE_SIZE].  Also, max_size must
      *      be greater than or equal to min_size.
      */
-    public long             max_size;
+    public long max_size;
     /**
      * min_size: Minimum size to which the cache can be adjusted.  The
      *      supplied value must fall in the closed interval
      *      [H5C__MIN_MAX_CACHE_SIZE, H5C__MAX_MAX_CACHE_SIZE].  Also, min_size
      *      must be less than or equal to max_size.
      */
-    public long             min_size;
+    public long min_size;
     /**
      * epoch_length: Number of accesses on the cache over which to collect
      *      hit rate stats before running the automatic cache resize code,
      *      if it is enabled.
      */
-    public long             epoch_length;
+    public long epoch_length;
     // size increase control fields
     /**
      * incr_mode: Instance of the H5C_cache_incr_mode enumerated type whose
      *      value indicates how we determine whether the cache size should be
      *      increased.  At present there are two possible values.
      */
-    public int              incr_mode;
+    public int incr_mode;
     /**
      * lower_hr_threshold: Lower hit rate threshold.  If the increment mode
      *      (incr_mode) is H5C_incr__threshold and the hit rate drops below the
@@ -117,105 +117,106 @@ public class H5AC_cache_config_t implements Serializable{
      *      max_size, and that the increment may be further restricted by the
      *      max_increment field if it is enabled.
      */
-    public double           lower_hr_threshold;
+    public double lower_hr_threshold;
     /**
      * increment:  Double containing the multiplier used to derive the new
      *      cache size from the old if a cache size increment is triggered.
      *      The increment must be greater than 1.0, and should not exceed 2.0.
      */
-    public double           increment;
+    public double increment;
     /**
      * apply_max_increment:  Boolean flag indicating whether the max_increment
      *      field should be used to limit the maximum cache size increment.
      */
-    public boolean          apply_max_increment;
+    public boolean apply_max_increment;
     /**
      * max_increment: If enabled by the apply_max_increment field described
      *      above, this field contains the maximum number of bytes by which the
      *      cache size can be increased in a single re-size.
      */
-    public long             max_increment;
+    public long max_increment;
     /**
      * flash_incr_mode:  Instance of the H5C_cache_flash_incr_mode enumerated
      *      type whose value indicates whether and by which algorithm we should
      *      make flash increases in the size of the cache to accommodate insertion
      *      of large entries and large increases in the size of a single entry.
      */
-    public int              flash_incr_mode;
+    public int flash_incr_mode;
     /**
      * flash_multiple: Double containing the multiple described above in the
      *      H5C_flash_incr__add_space section of the discussion of the
      *      flash_incr_mode section.  This field is ignored unless flash_incr_mode
      *      is H5C_flash_incr__add_space.
      */
-    public double           flash_multiple;
+    public double flash_multiple;
     /**
      * flash_threshold: Double containing the factor by which current max cache
      *      size is multiplied to obtain the size threshold for the add_space flash
      *      increment algorithm.  The field is ignored unless flash_incr_mode is
      *      H5C_flash_incr__add_space.
      */
-    public double           flash_threshold;
+    public double flash_threshold;
     // size decrease control fields
     /**
      * decr_mode: Instance of the H5C_cache_decr_mode enumerated type whose
      *      value indicates how we determine whether the cache size should be
      *      decreased.  At present there are four possibilities.
      */
-    public int              decr_mode;
+    public int decr_mode;
     /**
      * upper_hr_threshold: Upper hit rate threshold.  The use of this field
      *      varies according to the current decr_mode.
      */
-    public double           upper_hr_threshold;
+    public double upper_hr_threshold;
     /**
      * decrement: This field is only used when the decr_mode is
      *      H5C_decr__threshold.
      */
-    public double           decrement;
+    public double decrement;
     /**
      * apply_max_decrement:  Boolean flag used to determine whether decrements
      *      in cache size are to be limited by the max_decrement field.
      */
-    public boolean          apply_max_decrement;
+    public boolean apply_max_decrement;
     /**
      * max_decrement: Maximum number of bytes by which the cache size can be
      *      decreased in a single re-size.  Note that decrements may also be
      *      restricted by the min_size of the cache, and (in age out modes) by
      *      the empty_reserve field.
      */
-    public long             max_decrement;
+    public long max_decrement;
     /**
      * epochs_before_eviction:  Integer field used in H5C_decr__age_out and
      *      H5C_decr__age_out_with_threshold decrement modes.
      */
-    public int              epochs_before_eviction;
+    public int epochs_before_eviction;
     /**
      * apply_empty_reserve:  Boolean field controlling whether the empty_reserve
      *      field is to be used in computing the new cache size when the
      *      decr_mode is H5C_decr__age_out or H5C_decr__age_out_with_threshold.
      */
-    public boolean          apply_empty_reserve;
+    public boolean apply_empty_reserve;
     /**
      * empty_reserve:  To avoid a constant racheting down of cache size by small
      *      amounts in the H5C_decr__age_out and H5C_decr__age_out_with_threshold
      *      modes, this field allows one to require that any cache size
      *      reductions leave the specified fraction of unused space in the cache.
      */
-    public double           empty_reserve;
+    public double empty_reserve;
     // parallel configuration fields
     /**
      * dirty_bytes_threshold:  Threshold of dirty byte creation used to
      *     synchronize updates between caches.
      */
-    public long             dirty_bytes_threshold;
+    public long dirty_bytes_threshold;
     /**
      * metadata_write_strategy: Integer field containing a code indicating the
      *    desired metadata write strategy.
      */
-    public int              metadata_write_strategy;
+    public int metadata_write_strategy;
 
-    /** H5AC_cache_config_t is a public structure intended for use in public APIs.
+    /**
+     * H5AC_cache_config_t is a public structure intended for use in public APIs.
      * At least in its initial incarnation, it is basically a copy of struct
      * H5C_auto_size_ctl_t, minus the report_fcn field, and plus the
      * dirty_bytes_threshold field.
@@ -283,46 +284,47 @@ public class H5AC_cache_config_t implements Serializable{
      *     synchronize updates between caches.
      * @param metadata_write_strategy: Integer field containing a code indicating the
      *    desired metadata write strategy.
-    */
-    public H5AC_cache_config_t (int version, boolean rpt_fcn_enabled, boolean open_trace_file,
-            boolean close_trace_file, String trace_file_name, boolean evictions_enabled,
-            boolean set_initial_size, long initial_size, double min_clean_fraction, long max_size,
-            long min_size, long epoch_length, int incr_mode, double lower_hr_threshold,
-            double increment, boolean apply_max_increment, long max_increment, int flash_incr_mode,
-            double flash_multiple, double flash_threshold, int decr_mode, double upper_hr_threshold,
-            double decrement, boolean apply_max_decrement, long max_decrement,
-            int epochs_before_eviction, boolean apply_empty_reserve, double empty_reserve,
-            long dirty_bytes_threshold, int metadata_write_strategy)
+     */
+    public H5AC_cache_config_t(int version, boolean rpt_fcn_enabled, boolean open_trace_file,
+                               boolean close_trace_file, String trace_file_name, boolean evictions_enabled,
+                               boolean set_initial_size, long initial_size, double min_clean_fraction,
+                               long max_size, long min_size, long epoch_length, int incr_mode,
+                               double lower_hr_threshold, double increment, boolean apply_max_increment,
+                               long max_increment, int flash_incr_mode, double flash_multiple,
+                               double flash_threshold, int decr_mode, double upper_hr_threshold,
+                               double decrement, boolean apply_max_decrement, long max_decrement,
+                               int epochs_before_eviction, boolean apply_empty_reserve, double empty_reserve,
+                               long dirty_bytes_threshold, int metadata_write_strategy)
     {
-        this.version = version;
-        this.rpt_fcn_enabled = rpt_fcn_enabled;
-        this.open_trace_file = open_trace_file;
-        this.close_trace_file = close_trace_file;
-        this.trace_file_name = trace_file_name;
-        this.evictions_enabled = evictions_enabled;
-        this.set_initial_size = set_initial_size;
-        this.initial_size = initial_size;
-        this.min_clean_fraction = min_clean_fraction;
-        this.max_size = max_size;
-        this.min_size = min_size;
-        this.epoch_length = epoch_length;
-        this.incr_mode = incr_mode;
-        this.lower_hr_threshold = lower_hr_threshold;
-        this.increment = increment;
-        this.apply_max_increment = apply_max_increment;
-        this.max_increment = flash_incr_mode;
-        this.flash_incr_mode = flash_incr_mode;
-        this.flash_multiple = flash_multiple;
-        this.flash_threshold = flash_threshold;
-        this.decr_mode = decr_mode;
-        this.upper_hr_threshold = upper_hr_threshold;
-        this.decrement = decrement;
-        this.apply_max_decrement = apply_max_decrement;
-        this.max_decrement = max_decrement;
-        this.epochs_before_eviction = epochs_before_eviction;
-        this.apply_empty_reserve = apply_empty_reserve;
-        this.empty_reserve = empty_reserve;
-        this.dirty_bytes_threshold = dirty_bytes_threshold;
+        this.version                 = version;
+        this.rpt_fcn_enabled         = rpt_fcn_enabled;
+        this.open_trace_file         = open_trace_file;
+        this.close_trace_file        = close_trace_file;
+        this.trace_file_name         = trace_file_name;
+        this.evictions_enabled       = evictions_enabled;
+        this.set_initial_size        = set_initial_size;
+        this.initial_size            = initial_size;
+        this.min_clean_fraction      = min_clean_fraction;
+        this.max_size                = max_size;
+        this.min_size                = min_size;
+        this.epoch_length            = epoch_length;
+        this.incr_mode               = incr_mode;
+        this.lower_hr_threshold      = lower_hr_threshold;
+        this.increment               = increment;
+        this.apply_max_increment     = apply_max_increment;
+        this.max_increment           = flash_incr_mode;
+        this.flash_incr_mode         = flash_incr_mode;
+        this.flash_multiple          = flash_multiple;
+        this.flash_threshold         = flash_threshold;
+        this.decr_mode               = decr_mode;
+        this.upper_hr_threshold      = upper_hr_threshold;
+        this.decrement               = decrement;
+        this.apply_max_decrement     = apply_max_decrement;
+        this.max_decrement           = max_decrement;
+        this.epochs_before_eviction  = epochs_before_eviction;
+        this.apply_empty_reserve     = apply_empty_reserve;
+        this.empty_reserve           = empty_reserve;
+        this.dirty_bytes_threshold   = dirty_bytes_threshold;
         this.metadata_write_strategy = metadata_write_strategy;
     }
 }
diff --git a/java/src/hdf/hdf5lib/structs/H5A_info_t.java b/java/src/hdf/hdf5lib/structs/H5A_info_t.java
index f2c10f0..364e480 100644
--- a/java/src/hdf/hdf5lib/structs/H5A_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5A_info_t.java
@@ -18,7 +18,7 @@ import java.io.Serializable;
  * Information struct for Attribute (For H5Aget_info/H5Aget_info_by_idx/H5Aget_info_by_name)
  *
  */
-public class H5A_info_t implements Serializable{
+public class H5A_info_t implements Serializable {
     private static final long serialVersionUID = 2791443594041667613L;
     /** Indicate if creation order is valid */
     public boolean corder_valid;
@@ -29,10 +29,11 @@ public class H5A_info_t implements Serializable{
     /** Size of raw data */
     public long data_size;
 
-    H5A_info_t(boolean corder_valid, long corder, int cset, long data_size) {
+    H5A_info_t(boolean corder_valid, long corder, int cset, long data_size)
+    {
         this.corder_valid = corder_valid;
-        this.corder = corder;
-        this.cset = cset;
-        this.data_size = data_size;
+        this.corder       = corder;
+        this.cset         = cset;
+        this.data_size    = data_size;
     }
 }
diff --git a/java/src/hdf/hdf5lib/structs/H5E_error2_t.java b/java/src/hdf/hdf5lib/structs/H5E_error2_t.java
index 5981fc7..1be836f 100644
--- a/java/src/hdf/hdf5lib/structs/H5E_error2_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5E_error2_t.java
@@ -18,16 +18,16 @@ import java.io.Serializable;
  * Information struct for Attribute (For H5Ewalk)
  *
  */
-public class H5E_error2_t implements Serializable{
+public class H5E_error2_t implements Serializable {
     private static final long serialVersionUID = 279144359041667613L;
     /** class ID */
-    public long   cls_id;
+    public long cls_id;
     /** major error ID */
-    public long   maj_num;
+    public long maj_num;
     /** minor error number */
-    public long   min_num;
+    public long min_num;
     /** line in file where error occurs */
-    public int    line;
+    public int line;
     /** function in which error occurred */
     public String func_name;
     /** file in which error occurred */
@@ -35,13 +35,15 @@ public class H5E_error2_t implements Serializable{
     /** optional supplied description */
     public String desc;
 
-    H5E_error2_t(long cls_id, long maj_num, long min_num, int line, String func_name, String file_name, String desc) {
-        this.cls_id = cls_id;
-        this.maj_num = maj_num;
-        this.min_num = min_num;
-        this.line = line;
+    H5E_error2_t(long cls_id, long maj_num, long min_num, int line, String func_name, String file_name,
+                 String desc)
+    {
+        this.cls_id    = cls_id;
+        this.maj_num   = maj_num;
+        this.min_num   = min_num;
+        this.line      = line;
         this.func_name = func_name;
         this.file_name = file_name;
-        this.desc = desc;
+        this.desc      = desc;
     }
 }
diff --git a/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java b/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
index 95a9254..181d681 100644
--- a/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
@@ -26,17 +26,17 @@ public class H5FD_hdfs_fapl_t implements Serializable {
     private static final long serialVersionUID = 2072473407027648309L;
 
     /** Version number of the H5FD_hdfs_fapl_t structure. */
-    private int    version;
+    private int version;
     /** Name of "Name Node" to access as the HDFS server. */
     private String namenode_name;
     /** Port number to use to connect with Name Node. */
-    private int    namenode_port;
+    private int namenode_port;
     /** Username to use when accessing file. */
     private String user_name;
     /** Path to the location of the Kerberos authentication cache. */
     private String kerberos_ticket_cache;
     /** Size (in bytes) of the file read stream buffer. */
-    private int    stream_buffer_size;
+    private int stream_buffer_size;
 
     /**
      * Create a fapl_t structure with the specified components.
@@ -51,23 +51,20 @@ public class H5FD_hdfs_fapl_t implements Serializable {
      * @param stream_buffer_size
      *     Size (in bytes) of the file read stream buffer.
      */
-    public H5FD_hdfs_fapl_t(
-            String namenode_name,
-            int    namenode_port,
-            String user_name,
-            String kerberos_ticket_cache,
-            int    stream_buffer_size)
+    public H5FD_hdfs_fapl_t(String namenode_name, int namenode_port, String user_name,
+                            String kerberos_ticket_cache, int stream_buffer_size)
     {
-        this.version                = 1;
-        this.namenode_name          = namenode_name;
-        this.namenode_port          = namenode_port;
-        this.user_name              = user_name;
-        this.kerberos_ticket_cache  = kerberos_ticket_cache;
-        this.stream_buffer_size     = stream_buffer_size;
+        this.version               = 1;
+        this.namenode_name         = namenode_name;
+        this.namenode_port         = namenode_port;
+        this.user_name             = user_name;
+        this.kerberos_ticket_cache = kerberos_ticket_cache;
+        this.stream_buffer_size    = stream_buffer_size;
     }
 
     @Override
-    public boolean equals(Object o) {
+    public boolean equals(Object o)
+    {
         if (o == null)
             return false;
         if (!(o instanceof H5FD_hdfs_fapl_t))
@@ -90,7 +87,8 @@ public class H5FD_hdfs_fapl_t implements Serializable {
     }
 
     @Override
-    public int hashCode() {
+    public int hashCode()
+    {
         /* this is a _very bad_ hash algorithm for purposes of hashing! */
         /* implemented to satisfy the "contract" regarding equality     */
         int k = (int)this.version;
@@ -103,15 +101,11 @@ public class H5FD_hdfs_fapl_t implements Serializable {
     }
 
     @Override
-    public String toString() {
-    return "H5FD_hdfs_fapl_t (Version: " + this.version + ") {" +
-           "\n    namenode_name: '" + this.namenode_name +
-           "'\n    namenode_port: " + this.namenode_port +
-           "\n    user_name: '" + this.user_name +
-           "'\n    kerberos_ticket_cache: '" + this.kerberos_ticket_cache +
-           "'\n    stream_buffer_size: " + this.stream_buffer_size +
-           "\n}\n";
+    public String toString()
+    {
+        return "H5FD_hdfs_fapl_t (Version: " + this.version + ") {"
+            + "\n    namenode_name: '" + this.namenode_name + "'\n    namenode_port: " + this.namenode_port +
+            "\n    user_name: '" + this.user_name + "'\n    kerberos_ticket_cache: '" +
+            this.kerberos_ticket_cache + "'\n    stream_buffer_size: " + this.stream_buffer_size + "\n}\n";
     }
 }
-
-
diff --git a/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java b/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
index ad02979..67c2463 100644
--- a/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
@@ -46,7 +46,7 @@ public class H5FD_ros3_fapl_t implements Serializable {
     private static final long serialVersionUID = 8985533001471224030L;
 
     /** Version number of the H5FD_ros3_fapl_t structure */
-    private int   version;
+    private int version;
     /** Flag TRUE or FALSE whether or not requests are to be authenticated with the AWS4 algorithm. */
     private boolean authenticate;
     /** region "aws region" for authenticating request */
@@ -59,11 +59,12 @@ public class H5FD_ros3_fapl_t implements Serializable {
     /**
      * Create a "default" fapl_t structure, for anonymous access.
      */
-    public H5FD_ros3_fapl_t () {
+    public H5FD_ros3_fapl_t()
+    {
         /* H5FD_ros3_fapl_t("", "", ""); */ /* defer */
-        this.version = 1;
+        this.version    = 1;
         this.aws_region = "";
-        this.secret_id = "";
+        this.secret_id  = "";
         this.secret_key = "";
     }
 
@@ -76,16 +77,18 @@ public class H5FD_ros3_fapl_t implements Serializable {
      * @param id "secret id" or "access id" for authenticating request
      * @param key "secret key" or "access key" for authenticating request
      */
-    public H5FD_ros3_fapl_t (String region, String id, String key) {
-        this.version    = 1; /* must equal H5FD_CURR_ROS3_FAPL_T_VERSION */
-                             /* as found in H5FDros3.h                    */
+    public H5FD_ros3_fapl_t(String region, String id, String key)
+    {
+        this.version = 1; /* must equal H5FD_CURR_ROS3_FAPL_T_VERSION */
+                          /* as found in H5FDros3.h                    */
         this.aws_region = region;
         this.secret_id  = id;
         this.secret_key = key;
     }
 
     @Override
-    public boolean equals(Object o) {
+    public boolean equals(Object o)
+    {
         if (o == null)
             return false;
         if (!(o instanceof H5FD_ros3_fapl_t))
@@ -104,7 +107,8 @@ public class H5FD_ros3_fapl_t implements Serializable {
     }
 
     @Override
-    public int hashCode() {
+    public int hashCode()
+    {
         /* this is a _very bad_ hash algorithm for purposes of hashing! */
         /* implemented to satisfy the "contract" regarding equality     */
         int k = (int)this.version;
@@ -115,13 +119,10 @@ public class H5FD_ros3_fapl_t implements Serializable {
     }
 
     @Override
-    public String toString() {
-    return "H5FD_ros3_fapl_t (Version:" + this.version + ") {" +
-            "\n    aws_region : " + this.aws_region +
-            "\n    secret_id  : " + this.secret_id +
-            "\n    secret_key : " + this.secret_key +
-            "\n}\n";
+    public String toString()
+    {
+        return "H5FD_ros3_fapl_t (Version:" + this.version + ") {"
+            + "\n    aws_region : " + this.aws_region + "\n    secret_id  : " + this.secret_id +
+            "\n    secret_key : " + this.secret_key + "\n}\n";
     }
 }
-
-
diff --git a/java/src/hdf/hdf5lib/structs/H5F_info2_t.java b/java/src/hdf/hdf5lib/structs/H5F_info2_t.java
index 78e6d6c..1961b16 100644
--- a/java/src/hdf/hdf5lib/structs/H5F_info2_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5F_info2_t.java
@@ -18,26 +18,26 @@ import java.io.Serializable;
  * Information struct for object (for H5Fget_info)
  *
  */
-public class H5F_info2_t implements Serializable{
+public class H5F_info2_t implements Serializable {
     private static final long serialVersionUID = 4691681162544054518L;
     /** Superblock version number */
-    public int         super_version;
+    public int super_version;
     /** Superblock size */
-    public long        super_size;
+    public long super_size;
     /** Superblock extension size */
-    public long        super_ext_size;
+    public long super_ext_size;
     /** Version number of file free space management */
-    public int         free_version;
+    public int free_version;
     /** Free space manager metadata size */
-    public long        free_meta_size;
+    public long free_meta_size;
     /** Amount of free space in the file */
-    public long        free_tot_space;
+    public long free_tot_space;
     /** Version number of shared object header info */
-    public int         sohm_version;
+    public int sohm_version;
     /** Shared object header message header size */
-    public long        sohm_hdr_size;
+    public long sohm_hdr_size;
     /** Shared object header message index and heap size */
-    public H5_ih_info_t    sohm_msgs_info;
+    public H5_ih_info_t sohm_msgs_info;
 
     /**
      * Constructor for current "global" information about file
@@ -51,18 +51,18 @@ public class H5F_info2_t implements Serializable{
      * @param sohm_hdr_size: Shared object header message header size
      * @param sohm_msgs_info: Shared object header message index and heap size
      */
-    public H5F_info2_t (int super_version, long super_size, long super_ext_size,
-        int free_version, long free_meta_size, long free_tot_space,
-        int sohm_version, long sohm_hdr_size, H5_ih_info_t sohm_msgs_info)
+    public H5F_info2_t(int super_version, long super_size, long super_ext_size, int free_version,
+                       long free_meta_size, long free_tot_space, int sohm_version, long sohm_hdr_size,
+                       H5_ih_info_t sohm_msgs_info)
     {
-        this.super_version = super_version;
-        this.super_size = super_size;
+        this.super_version  = super_version;
+        this.super_size     = super_size;
         this.super_ext_size = super_ext_size;
-        this.free_version = free_version;
+        this.free_version   = free_version;
         this.free_meta_size = free_meta_size;
         this.free_tot_space = free_tot_space;
-        this.sohm_version = sohm_version;
-        this.sohm_hdr_size = sohm_hdr_size;
+        this.sohm_version   = sohm_version;
+        this.sohm_hdr_size  = sohm_hdr_size;
         this.sohm_msgs_info = sohm_msgs_info;
     }
 }
diff --git a/java/src/hdf/hdf5lib/structs/H5G_info_t.java b/java/src/hdf/hdf5lib/structs/H5G_info_t.java
index e79f859..10ae76a 100644
--- a/java/src/hdf/hdf5lib/structs/H5G_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5G_info_t.java
@@ -18,7 +18,7 @@ import java.io.Serializable;
  * Information struct for group (for H5Gget_info/H5Gget_info_by_name/H5Gget_info_by_idx)
  *
  */
-public class H5G_info_t implements Serializable{
+public class H5G_info_t implements Serializable {
     private static final long serialVersionUID = -3746463015312132912L;
     /** Type of storage for links in group */
     public int storage_type;
diff --git a/java/src/hdf/hdf5lib/structs/H5L_info_t.java b/java/src/hdf/hdf5lib/structs/H5L_info_t.java
index a3011c0..38b64d6 100644
--- a/java/src/hdf/hdf5lib/structs/H5L_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5L_info_t.java
@@ -23,39 +23,37 @@ import hdf.hdf5lib.HDF5Constants;
 public class H5L_info_t implements Serializable {
     private static final long serialVersionUID = -4754320605310155033L;
     /** Type of link */
-    public int         type;
+    public int type;
     /** Indicate if creation order is valid */
-    public boolean     corder_valid;
+    public boolean corder_valid;
     /** Creation order */
-    public long        corder;
+    public long corder;
     /** Character set of link name */
-    public int         cset;
+    public int cset;
     /** Character set of link name */
     public H5O_token_t token;
     /** Size of a soft link or user-defined link value */
-    public long        val_size;
+    public long val_size;
 
     /** Constructor for using object token portion of C union */
-    H5L_info_t (int type, boolean corder_valid, long corder,
-        int cset, H5O_token_t token)
+    H5L_info_t(int type, boolean corder_valid, long corder, int cset, H5O_token_t token)
     {
-        this.type = type;
+        this.type         = type;
         this.corder_valid = corder_valid;
-        this.corder = corder;
-        this.cset = cset;
-        this.token = token;
-        this.val_size = -1;
+        this.corder       = corder;
+        this.cset         = cset;
+        this.token        = token;
+        this.val_size     = -1;
     }
 
     /** Constructor for using val_size portion of C union */
-    H5L_info_t (int type, boolean corder_valid, long corder,
-        int cset, long val_size)
+    H5L_info_t(int type, boolean corder_valid, long corder, int cset, long val_size)
     {
-        this.type = type;
+        this.type         = type;
         this.corder_valid = corder_valid;
-        this.corder = corder;
-        this.cset = cset;
-        this.token = HDF5Constants.H5O_TOKEN_UNDEF;
-        this.val_size = val_size;
+        this.corder       = corder;
+        this.cset         = cset;
+        this.token        = HDF5Constants.H5O_TOKEN_UNDEF;
+        this.val_size     = val_size;
     }
 }
diff --git a/java/src/hdf/hdf5lib/structs/H5O_hdr_info_t.java b/java/src/hdf/hdf5lib/structs/H5O_hdr_info_t.java
index 2475dd9..16a0eae 100644
--- a/java/src/hdf/hdf5lib/structs/H5O_hdr_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5O_hdr_info_t.java
@@ -41,31 +41,31 @@ public class H5O_hdr_info_t implements Serializable {
     /** Flags to indicate message type is shared in header */
     public long mesg_shared;
 
-    H5O_hdr_info_t (int version, int nmesgs, int nchunks, int flags,
-        long space_total, long space_meta, long space_mesg, long space_free,
-        long mesg_present, long mesg_shared)
+    H5O_hdr_info_t(int version, int nmesgs, int nchunks, int flags, long space_total, long space_meta,
+                   long space_mesg, long space_free, long mesg_present, long mesg_shared)
     {
-        this.version = version;
-        this.nmesgs = nmesgs;
-        this.nchunks = nchunks;
-        this.flags = flags;
-        this.space_total = space_total;
-        this.space_meta = space_meta;
-        this.space_mesg = space_mesg;
-        this.space_free = space_free;
+        this.version      = version;
+        this.nmesgs       = nmesgs;
+        this.nchunks      = nchunks;
+        this.flags        = flags;
+        this.space_total  = space_total;
+        this.space_meta   = space_meta;
+        this.space_mesg   = space_mesg;
+        this.space_free   = space_free;
         this.mesg_present = mesg_present;
-        this.mesg_shared = mesg_shared;
+        this.mesg_shared  = mesg_shared;
     }
 
     @Override
-    public boolean equals(Object o) {
+    public boolean equals(Object o)
+    {
         if (this == o)
             return true;
 
         if (!(o instanceof H5O_hdr_info_t))
             return false;
 
-        H5O_hdr_info_t info = (H5O_hdr_info_t) o;
+        H5O_hdr_info_t info = (H5O_hdr_info_t)o;
 
         if (this.version != info.version)
             return false;
diff --git a/java/src/hdf/hdf5lib/structs/H5O_info_t.java b/java/src/hdf/hdf5lib/structs/H5O_info_t.java
index d2208d2..011a88e 100644
--- a/java/src/hdf/hdf5lib/structs/H5O_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5O_info_t.java
@@ -21,25 +21,26 @@ import java.io.Serializable;
 public class H5O_info_t implements Serializable {
     private static final long serialVersionUID = 4691681163544054518L;
     /** File number that object is located in */
-    public long        fileno;
+    public long fileno;
     /** Object token in file */
     public H5O_token_t token;
     /** Basic object type (group, dataset, etc.) */
-    public int         type;
+    public int type;
     /** Reference count of object */
-    public int         rc;
+    public int rc;
     /** Access time */
-    public long        atime;
+    public long atime;
     /** Modification time */
-    public long        mtime;
+    public long mtime;
     /** Change time */
-    public long        ctime;
+    public long ctime;
     /** Birth time */
-    public long        btime;
+    public long btime;
     /** Number of attributes attached to object */
-    public long        num_attrs;
+    public long num_attrs;
 
-    /** Constructor for data model information struct for objects
+    /**
+     * Constructor for data model information struct for objects
      *
      * @param fileno: File number that object is located in
      * @param token: Object token in file
@@ -51,17 +52,17 @@ public class H5O_info_t implements Serializable {
      * @param btime: Birth time
      * @param num_attrs: Number of attributes attached to object
      */
-    public H5O_info_t (long fileno, H5O_token_t token, int type,
-        int rc, long atime, long mtime, long ctime, long btime, long num_attrs)
+    public H5O_info_t(long fileno, H5O_token_t token, int type, int rc, long atime, long mtime, long ctime,
+                      long btime, long num_attrs)
     {
-        this.fileno = fileno;
-        this.token = token;
-        this.type = type;
-        this.rc = rc;
-        this.atime = atime;
-        this.mtime = mtime;
-        this.ctime = ctime;
-        this.btime = btime;
+        this.fileno    = fileno;
+        this.token     = token;
+        this.type      = type;
+        this.rc        = rc;
+        this.atime     = atime;
+        this.mtime     = mtime;
+        this.ctime     = ctime;
+        this.btime     = btime;
         this.num_attrs = num_attrs;
     }
 }
diff --git a/java/src/hdf/hdf5lib/structs/H5O_native_info_t.java b/java/src/hdf/hdf5lib/structs/H5O_native_info_t.java
index 70e5231..ec01b40 100644
--- a/java/src/hdf/hdf5lib/structs/H5O_native_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5O_native_info_t.java
@@ -15,7 +15,8 @@ package hdf.hdf5lib.structs;
 import java.io.Serializable;
 
 /**
- * Information struct for native HDF5 object info, such as object header metadata (for H5Oget_info/H5Oget_info_by_name/H5Oget_info_by_idx).
+ * Information struct for native HDF5 object info, such as object header metadata (for
+ * H5Oget_info/H5Oget_info_by_name/H5Oget_info_by_idx).
  *
  */
 public class H5O_native_info_t implements Serializable {
@@ -29,26 +30,26 @@ public class H5O_native_info_t implements Serializable {
     /** v2 B-tree and heap for attributes */
     public H5_ih_info_t attr_info;
 
-    H5O_native_info_t (H5O_hdr_info_t oheader_info, H5_ih_info_t obj_info, H5_ih_info_t attr_info)
+    H5O_native_info_t(H5O_hdr_info_t oheader_info, H5_ih_info_t obj_info, H5_ih_info_t attr_info)
     {
-        this.hdr_info = oheader_info;
-        this.obj_info = obj_info;
+        this.hdr_info  = oheader_info;
+        this.obj_info  = obj_info;
         this.attr_info = attr_info;
     }
 
     @Override
-    public boolean equals(Object o) {
+    public boolean equals(Object o)
+    {
         if (this == o)
             return true;
 
         if (!(o instanceof H5O_native_info_t))
             return false;
 
-        H5O_native_info_t info = (H5O_native_info_t) o;
+        H5O_native_info_t info = (H5O_native_info_t)o;
 
-        if (!this.hdr_info.equals(info.hdr_info)
-         || !this.obj_info.equals(info.obj_info)
-         || !this.attr_info.equals(info.attr_info))
+        if (!this.hdr_info.equals(info.hdr_info) || !this.obj_info.equals(info.obj_info) ||
+            !this.attr_info.equals(info.attr_info))
             return false;
 
         return true;
diff --git a/java/src/hdf/hdf5lib/structs/H5O_token_t.java b/java/src/hdf/hdf5lib/structs/H5O_token_t.java
index f0bb978..8f2b7e2 100644
--- a/java/src/hdf/hdf5lib/structs/H5O_token_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5O_token_t.java
@@ -30,28 +30,25 @@ public class H5O_token_t implements Serializable {
      */
     public byte[] data;
 
-    H5O_token_t (byte[] data) {
-        this.data = data;
-    }
+    H5O_token_t(byte[] data) { this.data = data; }
 
     /**
      * Check if token data is undefined
      *
      * @return true if token data is undefined
      */
-    public boolean isUndefined() {
-        return this.equals(HDF5Constants.H5O_TOKEN_UNDEF);
-    }
+    public boolean isUndefined() { return this.equals(HDF5Constants.H5O_TOKEN_UNDEF); }
 
     @Override
-    public boolean equals(Object o) {
+    public boolean equals(Object o)
+    {
         if (this == o)
             return true;
 
         if (!(o instanceof H5O_token_t))
             return false;
 
-        H5O_token_t token = (H5O_token_t) o;
+        H5O_token_t token = (H5O_token_t)o;
 
         return Arrays.equals(this.data, token.data);
     }
diff --git a/java/src/hdf/hdf5lib/structs/H5_ih_info_t.java b/java/src/hdf/hdf5lib/structs/H5_ih_info_t.java
index 0c6111b..3213695 100644
--- a/java/src/hdf/hdf5lib/structs/H5_ih_info_t.java
+++ b/java/src/hdf/hdf5lib/structs/H5_ih_info_t.java
@@ -21,25 +21,26 @@ import java.io.Serializable;
 public class H5_ih_info_t implements Serializable {
     private static final long serialVersionUID = -142238015615462707L;
     /** btree and/or list size of index */
-    public long     index_size;
+    public long index_size;
     /** btree and/or list size of hp */
-    public long     heap_size;
+    public long heap_size;
 
-    H5_ih_info_t (long index_size, long heap_size)
+    H5_ih_info_t(long index_size, long heap_size)
     {
         this.index_size = index_size;
-        this.heap_size = heap_size;
+        this.heap_size  = heap_size;
     }
 
     @Override
-    public boolean equals(Object o) {
+    public boolean equals(Object o)
+    {
         if (this == o)
             return true;
 
         if (!(o instanceof H5_ih_info_t))
             return false;
 
-        H5_ih_info_t info = (H5_ih_info_t) o;
+        H5_ih_info_t info = (H5_ih_info_t)o;
 
         if (this.index_size != info.index_size)
             return false;
diff --git a/java/src/hdf/hdf5lib/structs/package-info.java b/java/src/hdf/hdf5lib/structs/package-info.java
index 8a9d97d..a3ec6cd 100644
--- a/java/src/hdf/hdf5lib/structs/package-info.java
+++ b/java/src/hdf/hdf5lib/structs/package-info.java
@@ -11,7 +11,8 @@
  * help@hdfgroup.org.                                                        *
  * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
 
-/** All structure definitions define java equivalents of the C structures needed
+/**
+ * All structure definitions define java equivalents of the C structures needed
  * by the C API calls. See the C API for information about the structures.
  */
 package hdf.hdf5lib.structs;
diff --git a/java/test/CMakeLists.txt b/java/test/CMakeLists.txt
index b1186a4..9d1ed2b 100644
--- a/java/test/CMakeLists.txt
+++ b/java/test/CMakeLists.txt
@@ -86,6 +86,13 @@ foreach (test_file ${HDF5_JAVA_TEST_SOURCES})
 
   add_dependencies (${HDF5_JAVA_TEST_LIB_TARGET}_${test_file} ${HDF5_JAVA_HDF5_LIB_TARGET})
   set_target_properties (${HDF5_JAVA_TEST_LIB_TARGET}_${test_file} PROPERTIES FOLDER test/java)
+
+  #-----------------------------------------------------------------------------
+  # Add Target to clang-format
+  #-----------------------------------------------------------------------------
+  if (HDF5_ENABLE_FORMATTERS)
+    clang_format (HDF5_JAVA_TEST_${test_file}_SRC_FORMAT ${test_file}.java)
+  endif ()
 endforeach ()
 
 foreach (h5_file ${HDF5_JAVA_TEST_SOURCES})
diff --git a/java/test/TestAll.java b/java/test/TestAll.java
index 16414e4..c22fbfe 100644
--- a/java/test/TestAll.java
+++ b/java/test/TestAll.java
@@ -16,21 +16,17 @@ import org.junit.runner.RunWith;
 import org.junit.runners.Suite;
 
 @RunWith(Suite.class)
-@Suite.SuiteClasses( { TestH5.class,
-        TestH5Eparams.class, TestH5Eregister.class, TestH5Edefault.class, TestH5E.class,
-        TestH5Fparams.class, TestH5Fbasic.class, TestH5F.class, TestH5Fswmr.class,
-        TestH5Gbasic.class, TestH5G.class, TestH5Giterate.class,
-        TestH5Sbasic.class, TestH5S.class,
-        TestH5Tparams.class, TestH5Tbasic.class, TestH5T.class,
-        TestH5Dparams.class, TestH5D.class, TestH5Dplist.class, TestH5Drw.class,
-        TestH5Lparams.class, TestH5Lbasic.class, TestH5Lcreate.class,
-        TestH5R.class, TestH5Rref.class,
-        TestH5P.class, TestH5PData.class, TestH5Pfapl.class, TestH5Pvirtual.class, TestH5Plist.class,
-        TestH5Pfapls3.class, TestH5Pfaplhdfs.class,
-        TestH5A.class, TestH5Arw.class,
-        TestH5Oparams.class, TestH5Obasic.class, TestH5Ocopy.class, TestH5Ocreate.class,
-        TestH5PL.class, TestH5Z.class
-})
+@Suite.SuiteClasses({TestH5.class,          TestH5Eparams.class,  TestH5Eregister.class, TestH5Edefault.class,
+                     TestH5E.class,         TestH5Fparams.class,  TestH5Fbasic.class,    TestH5F.class,
+                     TestH5Fswmr.class,     TestH5Gbasic.class,   TestH5G.class,         TestH5Giterate.class,
+                     TestH5Sbasic.class,    TestH5S.class,        TestH5Tparams.class,   TestH5Tbasic.class,
+                     TestH5T.class,         TestH5Dparams.class,  TestH5D.class,         TestH5Dplist.class,
+                     TestH5Drw.class,       TestH5Lparams.class,  TestH5Lbasic.class,    TestH5Lcreate.class,
+                     TestH5R.class,         TestH5Rref.class,     TestH5P.class,         TestH5PData.class,
+                     TestH5Pfapl.class,     TestH5Pvirtual.class, TestH5Plist.class,     TestH5Pfapls3.class,
+                     TestH5Pfaplhdfs.class, TestH5A.class,        TestH5Arw.class,       TestH5Oparams.class,
+                     TestH5Obasic.class,    TestH5Ocopy.class,    TestH5Ocreate.class,   TestH5PL.class,
+                     TestH5Z.class})
 
 public class TestAll {
 }
diff --git a/java/test/TestH5.java b/java/test/TestH5.java
index 168f28a..67a522c 100644
--- a/java/test/TestH5.java
+++ b/java/test/TestH5.java
@@ -20,9 +20,9 @@ import static org.junit.Assert.fail;
 import java.io.ByteArrayOutputStream;
 import java.io.File;
 import java.io.FileInputStream;
+import java.io.FileNotFoundException;
 import java.io.FileOutputStream;
 import java.io.FileReader;
-import java.io.FileNotFoundException;
 import java.io.IOException;
 import java.io.ObjectInputStream;
 import java.io.ObjectOutputStream;
@@ -46,45 +46,53 @@ import org.junit.rules.TestName;
  *
  */
 public class TestH5 {
-    @Rule public TestName testname = new TestName();
-    private static final String H5_FILE = "testData.h5";
-    private static final String EXPORT_FILE = "testExport.txt";
-    private static final String H5_REGION_FILE = "trefer_reg.h5";
+    @Rule
+    public TestName testname                       = new TestName();
+    private static final String H5_FILE            = "testData.h5";
+    private static final String EXPORT_FILE        = "testExport.txt";
+    private static final String H5_REGION_FILE     = "trefer_reg.h5";
     private static final String EXPORT_REGION_FILE = "testExportReg.txt";
-    private static final String H5_ATTR_FILE = "trefer_attr.h5";
-    private static final String EXPORT_ATTR_FILE = "testExportAttr.txt";
-    private static final String H5_DREG_FILE = "tdatareg.h5";
-    private static final String EXPORT_DREG_FILE = "testExportDReg.txt";
-    private static final String H5_AREG_FILE = "tattrreg.h5";
-    private static final String EXPORT_AREG_FILE = "testExportAReg.txt";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    private static final int DIM_BLKS = 36;
-    private static final int DIM_PNTS = 10;
-    private static final int DIM_ATTR = 12;
-    private static final int RANK = 2;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-
-    private final void _deleteFile(String filename) {
+    private static final String H5_ATTR_FILE       = "trefer_attr.h5";
+    private static final String EXPORT_ATTR_FILE   = "testExportAttr.txt";
+    private static final String H5_DREG_FILE       = "tdatareg.h5";
+    private static final String EXPORT_DREG_FILE   = "testExportDReg.txt";
+    private static final String H5_AREG_FILE       = "tattrreg.h5";
+    private static final String EXPORT_AREG_FILE   = "testExportAReg.txt";
+    private static final int DIM_X                 = 4;
+    private static final int DIM_Y                 = 6;
+    private static final int DIM_BLKS              = 36;
+    private static final int DIM_PNTS              = 10;
+    private static final int DIM_ATTR              = 12;
+    private static final int RANK                  = 2;
+    long H5fid                                     = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                                    = HDF5Constants.H5I_INVALID_HID;
+    long H5did                                     = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                                  = {DIM_X, DIM_Y};
+
+    private final void _deleteFile(String filename)
+    {
         File file = null;
         try {
             file = new File(filename);
         }
-        catch (Throwable err) {}
+        catch (Throwable err) {
+        }
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32LE, dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32LE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -95,12 +103,13 @@ public class TestH5 {
         return did;
     }
 
-    private final void _createH5File() {
+    private final void _createH5File()
+    {
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
-            H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+            H5did  = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -118,62 +127,77 @@ public class TestH5 {
         }
     }
 
-    private final void _closeH5File() {
+    private final void _closeH5File()
+    {
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
-        H5fid = HDF5Constants.H5I_INVALID_HID;
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
+        H5fid  = HDF5Constants.H5I_INVALID_HID;
         H5dsid = HDF5Constants.H5I_INVALID_HID;
-        H5did = HDF5Constants.H5I_INVALID_HID;
+        H5did  = HDF5Constants.H5I_INVALID_HID;
     }
 
-    public void _openH5File(String filename, String dsetname) {
-       try {
-           H5fid = H5.H5Fopen(filename,
-                   HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5._openH5file: " + err);
-       }
-       assertTrue("TestH5._openH5file: H5.H5Fopen: ", H5fid >= 0);
-       try {
-           H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5._openH5file: " + err);
-       }
-       assertTrue("TestH5._openH5file: H5.H5Dopen: ", H5did >= 0);
-       try {
-           H5dsid = H5.H5Dget_space(H5did);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5._openH5file: " + err);
-       }
-       assertTrue("TestH5._openH5file: H5.H5Screate_simple: ",H5dsid > 0);
+    public void _openH5File(String filename, String dsetname)
+    {
+        try {
+            H5fid = H5.H5Fopen(filename, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5._openH5file: " + err);
+        }
+        assertTrue("TestH5._openH5file: H5.H5Fopen: ", H5fid >= 0);
+        try {
+            H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5._openH5file: " + err);
+        }
+        assertTrue("TestH5._openH5file: H5.H5Dopen: ", H5did >= 0);
+        try {
+            H5dsid = H5.H5Dget_space(H5did);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5._openH5file: " + err);
+        }
+        assertTrue("TestH5._openH5file: H5.H5Screate_simple: ", H5dsid > 0);
     }
 
-    public final void _deleteH5file() {
+    public final void _deleteH5file()
+    {
         _closeH5File();
         _deleteFile(H5_FILE);
     }
 
     @After
-    public void closeH5File() throws HDF5LibraryException {
+    public void closeH5File() throws HDF5LibraryException
+    {
         _closeH5File();
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.println();
     }
 
     @Before
-    public void verifyCount()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+    public void verifyCount() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
 
@@ -184,33 +208,30 @@ public class TestH5 {
      * being retained hdf java does not access the symbol.
      */
     @Test
-    public void testJ2C() {
-        int H5F_ACC_RDONLY = 0x0000;
-        int H5F_ACC_RDWR = 0x0001;
-        int H5F_ACC_TRUNC = 0x0002;
-        int H5F_ACC_EXCL = 0x0004;
-        int H5F_ACC_CREAT = 0x0010;
-        int H5F_OBJ_FILE = 0x0001;
-        int H5F_OBJ_DATASET = 0x0002;
-        int H5F_OBJ_GROUP = 0x0004;
+    public void testJ2C()
+    {
+        int H5F_ACC_RDONLY   = 0x0000;
+        int H5F_ACC_RDWR     = 0x0001;
+        int H5F_ACC_TRUNC    = 0x0002;
+        int H5F_ACC_EXCL     = 0x0004;
+        int H5F_ACC_CREAT    = 0x0010;
+        int H5F_OBJ_FILE     = 0x0001;
+        int H5F_OBJ_DATASET  = 0x0002;
+        int H5F_OBJ_GROUP    = 0x0004;
         int H5F_OBJ_DATATYPE = 0x0008;
-        int H5F_OBJ_ATTR = 0x0010;
-        int H5F_OBJ_ALL = H5F_OBJ_FILE | H5F_OBJ_DATASET | H5F_OBJ_GROUP
-                | H5F_OBJ_DATATYPE | H5F_OBJ_ATTR;
+        int H5F_OBJ_ATTR     = 0x0010;
+        int H5F_OBJ_ALL   = H5F_OBJ_FILE | H5F_OBJ_DATASET | H5F_OBJ_GROUP | H5F_OBJ_DATATYPE | H5F_OBJ_ATTR;
         int H5F_OBJ_LOCAL = 0x0020;
 
-        int definedValues[] = { H5F_ACC_RDONLY, H5F_ACC_RDWR, H5F_ACC_TRUNC,
-                H5F_ACC_EXCL, H5F_ACC_CREAT, H5F_OBJ_FILE,
-                H5F_OBJ_DATASET, H5F_OBJ_GROUP, H5F_OBJ_DATATYPE, H5F_OBJ_ATTR,
-                H5F_OBJ_ALL, H5F_OBJ_LOCAL };
+        int definedValues[] = {H5F_ACC_RDONLY,   H5F_ACC_RDWR, H5F_ACC_TRUNC,   H5F_ACC_EXCL,
+                               H5F_ACC_CREAT,    H5F_OBJ_FILE, H5F_OBJ_DATASET, H5F_OBJ_GROUP,
+                               H5F_OBJ_DATATYPE, H5F_OBJ_ATTR, H5F_OBJ_ALL,     H5F_OBJ_LOCAL};
 
-        int j2cValues[] = { HDF5Constants.H5F_ACC_RDONLY,
-                HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5F_ACC_EXCL,
-                HDF5Constants.H5F_ACC_CREAT, HDF5Constants.H5F_OBJ_FILE,
-                HDF5Constants.H5F_OBJ_DATASET, HDF5Constants.H5F_OBJ_GROUP,
-                HDF5Constants.H5F_OBJ_DATATYPE, HDF5Constants.H5F_OBJ_ATTR,
-                HDF5Constants.H5F_OBJ_ALL, HDF5Constants.H5F_OBJ_LOCAL };
+        int j2cValues[] = {
+            HDF5Constants.H5F_ACC_RDONLY,  HDF5Constants.H5F_ACC_RDWR,  HDF5Constants.H5F_ACC_TRUNC,
+            HDF5Constants.H5F_ACC_EXCL,    HDF5Constants.H5F_ACC_CREAT, HDF5Constants.H5F_OBJ_FILE,
+            HDF5Constants.H5F_OBJ_DATASET, HDF5Constants.H5F_OBJ_GROUP, HDF5Constants.H5F_OBJ_DATATYPE,
+            HDF5Constants.H5F_OBJ_ATTR,    HDF5Constants.H5F_OBJ_ALL,   HDF5Constants.H5F_OBJ_LOCAL};
 
         for (int i = 0; i < definedValues.length; i++) {
             assertEquals(definedValues[i], j2cValues[i]);
@@ -224,7 +245,8 @@ public class TestH5 {
      * Test method for {@link hdf.hdf5lib.H5#H5error_off()}.
      */
     @Test
-    public void testH5error_off() {
+    public void testH5error_off()
+    {
         try {
             H5.H5error_off();
         }
@@ -237,7 +259,8 @@ public class TestH5 {
      * Test method for {@link hdf.hdf5lib.H5#H5open()}.
      */
     @Test
-    public void testH5open() {
+    public void testH5open()
+    {
         try {
             H5.H5open();
         }
@@ -250,7 +273,8 @@ public class TestH5 {
      * Test method for {@link hdf.hdf5lib.H5#H5garbage_collect()}.
      */
     @Test
-    public void testH5garbage_collect() {
+    public void testH5garbage_collect()
+    {
         try {
             H5.H5garbage_collect();
         }
@@ -265,17 +289,18 @@ public class TestH5 {
      * .
      */
     @Test
-    public void testH5set_free_list_limits() {
+    public void testH5set_free_list_limits()
+    {
         int reg_global_lim = 1;
-        int reg_list_lim = 1;
+        int reg_list_lim   = 1;
         int arr_global_lim = 1;
-        int arr_list_lim = 1;
+        int arr_list_lim   = 1;
         int blk_global_lim = 1;
-        int blk_list_lim = 1;
+        int blk_list_lim   = 1;
 
         try {
-            H5.H5set_free_list_limits(reg_global_lim, reg_list_lim,
-                    arr_global_lim, arr_list_lim, blk_global_lim, blk_list_lim);
+            H5.H5set_free_list_limits(reg_global_lim, reg_list_lim, arr_global_lim, arr_list_lim,
+                                      blk_global_lim, blk_list_lim);
         }
         catch (Throwable err) {
             fail("H5.H5set_free_list_limits failed: " + err);
@@ -286,8 +311,9 @@ public class TestH5 {
      * Test method for {@link hdf.hdf5lib.H5#H5get_libversion(int[])}.
      */
     @Test
-    public void testH5get_libversion() {
-        int libversion[] = { 1, 13, 2 };
+    public void testH5get_libversion()
+    {
+        int libversion[] = {1, 13, 2};
 
         try {
             H5.H5get_libversion(libversion);
@@ -309,7 +335,8 @@ public class TestH5 {
      * fail.
      */
     @Test
-    public void testH5get_libversion_null_param() {
+    public void testH5get_libversion_null_param()
+    {
         try {
             H5.H5get_libversion(null);
         }
@@ -325,7 +352,8 @@ public class TestH5 {
      * {@link hdf.hdf5lib.H5#H5check_version(int, int, int)}.
      */
     @Test
-    public void testH5check_version() {
+    public void testH5check_version()
+    {
         int majnum = 1, minnum = 13, relnum = 2;
 
         try {
@@ -344,8 +372,9 @@ public class TestH5 {
     }
 
     @Test
-    public void testIsSerializable() {
-        H5 test = new H5();
+    public void testIsSerializable()
+    {
+        H5 test                   = new H5();
         ByteArrayOutputStream out = new ByteArrayOutputStream();
         ObjectOutputStream oos;
         try {
@@ -358,7 +387,6 @@ public class TestH5 {
             fail("ObjectOutputStream failed: " + err);
         }
         assertTrue(out.toByteArray().length > 0);
-
     }
 
     @SuppressWarnings("static-access")
@@ -368,7 +396,7 @@ public class TestH5 {
         try {
             H5 test = new H5();
 
-            FileOutputStream fos = new FileOutputStream("temph5.ser");
+            FileOutputStream fos   = new FileOutputStream("temph5.ser");
             ObjectOutputStream oos = new ObjectOutputStream(fos);
             oos.writeObject(test);
             oos.close();
@@ -378,14 +406,14 @@ public class TestH5 {
         }
 
         try {
-            FileInputStream fis = new FileInputStream("temph5.ser");
+            FileInputStream fis   = new FileInputStream("temph5.ser");
             ObjectInputStream ois = new ObjectInputStream(fis);
-            H5 test = (hdf.hdf5lib.H5) ois.readObject();
+            H5 test               = (hdf.hdf5lib.H5)ois.readObject();
             ois.close();
 
-            assertTrue("H5.LIB_VERSION[0]", test.LIB_VERSION[0]==H5.LIB_VERSION[0]);
-            assertTrue("H5.LIB_VERSION[1]", test.LIB_VERSION[1]==H5.LIB_VERSION[1]);
-//            assertTrue("H5.LIB_VERSION[2]", test.LIB_VERSION[2]==H5.LIB_VERSION[2]);
+            assertTrue("H5.LIB_VERSION[0]", test.LIB_VERSION[0] == H5.LIB_VERSION[0]);
+            assertTrue("H5.LIB_VERSION[1]", test.LIB_VERSION[1] == H5.LIB_VERSION[1]);
+            //            assertTrue("H5.LIB_VERSION[2]", test.LIB_VERSION[2]==H5.LIB_VERSION[2]);
 
             // Clean up the file
             new File("temph5.ser").delete();
@@ -396,10 +424,11 @@ public class TestH5 {
     }
 
     @Test
-    public void testH5export_dataset() {
-        int[][] dset_data = new int[DIM_X][DIM_Y];
+    public void testH5export_dataset()
+    {
+        int[][] dset_data   = new int[DIM_X][DIM_Y];
         int[][] dset_indata = new int[DIM_X][DIM_Y];
-        int FILLVAL = 99;
+        int FILLVAL         = 99;
 
         _createH5File();
 
@@ -410,9 +439,8 @@ public class TestH5 {
 
         try {
             if (H5did >= 0)
-                H5.H5Dwrite(H5did, HDF5Constants.H5T_STD_I32LE,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                H5.H5Dwrite(H5did, HDF5Constants.H5T_STD_I32LE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                            HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception e) {
             e.printStackTrace();
@@ -433,12 +461,12 @@ public class TestH5 {
         File file = new File(EXPORT_FILE);
 
         try {
-            Reader reader = new FileReader(EXPORT_FILE);
+            Reader reader                   = new FileReader(EXPORT_FILE);
             StreamTokenizer streamTokenizer = new StreamTokenizer(reader);
-            int indx = 0;
-            int jndx = 0;
-            while(streamTokenizer.nextToken() != StreamTokenizer.TT_EOF){
-                if(streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+            int indx                        = 0;
+            int jndx                        = 0;
+            while (streamTokenizer.nextToken() != StreamTokenizer.TT_EOF) {
+                if (streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
                     dset_indata[indx][jndx] = (int)streamTokenizer.nval;
                     jndx++;
                     if (jndx >= DIM_Y) {
@@ -453,21 +481,23 @@ public class TestH5 {
             err.printStackTrace();
             fail("read file failed: " + err);
         }
-        for(int row = 0; row < DIM_X; row++)
-            for(int col = 0; col < DIM_Y; col++) {
-                assertTrue("H5export_dataset: <"+row+","+col+">"+dset_indata[row][col]+"=99", dset_indata[row][col]==99);
+        for (int row = 0; row < DIM_X; row++)
+            for (int col = 0; col < DIM_Y; col++) {
+                assertTrue("H5export_dataset: <" + row + "," + col + ">" + dset_indata[row][col] + "=99",
+                           dset_indata[row][col] == 99);
             }
         _deleteH5file();
     }
 
     @Test
-    public void testH5export_region() {
-        int[] dset_data_expect = {66, 69, 72, 75, 78, 81, 96, 99, 102, 105, 108,
-                111, 126, 129, 132, 135, 138, 141, 156, 159, 162, 165, 168, 171,
-                186, 189, 192, 195, 198, 201, 216, 219, 222, 225, 228, 231,
-                207, 66, 252, 48, 84, 96, 12, 14, 213, 99};
-        int[] dset_indata = new int[DIM_BLKS+DIM_PNTS];
-        String objName = "/Dataset1";
+    public void testH5export_region()
+    {
+        int[] dset_data_expect = {66,  69,  72,  75,  78,  81,  96,  99,  102, 105, 108, 111,
+                                  126, 129, 132, 135, 138, 141, 156, 159, 162, 165, 168, 171,
+                                  186, 189, 192, 195, 198, 201, 216, 219, 222, 225, 228, 231,
+                                  207, 66,  252, 48,  84,  96,  12,  14,  213, 99};
+        int[] dset_indata      = new int[DIM_BLKS + DIM_PNTS];
+        String objName         = "/Dataset1";
 
         _openH5File(H5_REGION_FILE, objName);
 
@@ -482,11 +512,11 @@ public class TestH5 {
         File file = new File(EXPORT_REGION_FILE);
 
         try {
-            Reader reader = new FileReader(EXPORT_REGION_FILE);
+            Reader reader                   = new FileReader(EXPORT_REGION_FILE);
             StreamTokenizer streamTokenizer = new StreamTokenizer(reader);
-            int indx = 0;
-            while(streamTokenizer.nextToken() != StreamTokenizer.TT_EOF){
-                if(streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+            int indx                        = 0;
+            while (streamTokenizer.nextToken() != StreamTokenizer.TT_EOF) {
+                if (streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
                     dset_indata[indx] = (int)streamTokenizer.nval;
                     indx++;
                 }
@@ -497,15 +527,17 @@ public class TestH5 {
             err.printStackTrace();
             fail("read file failed: " + err);
         }
-        for(int row = 0; row < DIM_X; row++)
-            assertTrue("testH5export_region: <"+row+">"+dset_indata[row], dset_indata[row]==dset_data_expect[row]);
+        for (int row = 0; row < DIM_X; row++)
+            assertTrue("testH5export_region: <" + row + ">" + dset_indata[row],
+                       dset_indata[row] == dset_data_expect[row]);
     }
 
     @Test
-    public void testH5export_attribute() {
+    public void testH5export_attribute()
+    {
         int[] dset_data_expect = {0, 3, 6, 9, 1, 4, 7, 10, 2, 5, 8, 11};
-        int[] dset_indata = new int[DIM_ATTR];
-        String objName = "/Dataset3";
+        int[] dset_indata      = new int[DIM_ATTR];
+        String objName         = "/Dataset3";
 
         _openH5File(H5_ATTR_FILE, objName);
 
@@ -520,12 +552,12 @@ public class TestH5 {
         File file = new File(EXPORT_ATTR_FILE);
 
         try {
-            Reader reader = new FileReader(EXPORT_ATTR_FILE);
+            Reader reader                   = new FileReader(EXPORT_ATTR_FILE);
             StreamTokenizer streamTokenizer = new StreamTokenizer(reader);
-            int indx = 0;
-            int jndx = 0;
-            while(streamTokenizer.nextToken() != StreamTokenizer.TT_EOF){
-                if(streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+            int indx                        = 0;
+            int jndx                        = 0;
+            while (streamTokenizer.nextToken() != StreamTokenizer.TT_EOF) {
+                if (streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
                     dset_indata[indx] = (int)streamTokenizer.nval;
                     indx++;
                 }
@@ -536,18 +568,20 @@ public class TestH5 {
             err.printStackTrace();
             fail("read file failed: " + err);
         }
-        for(int row = 0; row < DIM_X; row++)
-            assertTrue("testH5export_attribute: <"+row+">"+dset_indata[row], dset_indata[row]==dset_data_expect[row]);
+        for (int row = 0; row < DIM_X; row++)
+            assertTrue("testH5export_attribute: <" + row + ">" + dset_indata[row],
+                       dset_indata[row] == dset_data_expect[row]);
     }
 
     @Test
-    public void testH5export_regdataset() {
-        int[] dset_data_expect = {66, 69, 72, 75, 78, 81, 96, 99, 102, 105, 108,
-                111, 126, 129, 132, 135, 138, 141, 156, 159, 162, 165, 168, 171,
-                186, 189, 192, 195, 198, 201, 216, 219, 222, 225, 228, 231,
-                207, 66, 252, 48, 84, 96, 12, 14, 213, 99};
-        int[] dset_indata = new int[DIM_BLKS+DIM_PNTS];
-        String objName = "/Dataset1";
+    public void testH5export_regdataset()
+    {
+        int[] dset_data_expect = {66,  69,  72,  75,  78,  81,  96,  99,  102, 105, 108, 111,
+                                  126, 129, 132, 135, 138, 141, 156, 159, 162, 165, 168, 171,
+                                  186, 189, 192, 195, 198, 201, 216, 219, 222, 225, 228, 231,
+                                  207, 66,  252, 48,  84,  96,  12,  14,  213, 99};
+        int[] dset_indata      = new int[DIM_BLKS + DIM_PNTS];
+        String objName         = "/Dataset1";
 
         _openH5File(H5_DREG_FILE, objName);
 
@@ -562,11 +596,11 @@ public class TestH5 {
         File file = new File(EXPORT_DREG_FILE);
 
         try {
-            Reader reader = new FileReader(EXPORT_DREG_FILE);
+            Reader reader                   = new FileReader(EXPORT_DREG_FILE);
             StreamTokenizer streamTokenizer = new StreamTokenizer(reader);
-            int indx = 0;
-            while(streamTokenizer.nextToken() != StreamTokenizer.TT_EOF){
-                if(streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+            int indx                        = 0;
+            while (streamTokenizer.nextToken() != StreamTokenizer.TT_EOF) {
+                if (streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
                     dset_indata[indx] = (int)streamTokenizer.nval;
                     indx++;
                 }
@@ -577,19 +611,21 @@ public class TestH5 {
             err.printStackTrace();
             fail("read file failed: " + err);
         }
-        for(int row = 0; row < DIM_X; row++)
-            assertTrue("testH5export_regdataset: <"+row+">"+dset_indata[row], dset_indata[row]==dset_data_expect[row]);
+        for (int row = 0; row < DIM_X; row++)
+            assertTrue("testH5export_regdataset: <" + row + ">" + dset_indata[row],
+                       dset_indata[row] == dset_data_expect[row]);
     }
 
     @Test
-    public void testH5export_attrdataset() {
-        int[] dset_data_expect = {66, 69, 72, 75, 78, 81, 96, 99, 102, 105, 108,
-                111, 126, 129, 132, 135, 138, 141, 156, 159, 162, 165, 168, 171,
-                186, 189, 192, 195, 198, 201, 216, 219, 222, 225, 228, 231,
-                207, 66, 252, 48, 84, 96, 12, 14, 213, 99};
-        int[] dset_indata = new int[DIM_BLKS+DIM_PNTS];
-        String dsetName = "/Dataset1";
-        String objName = "Attribute1";
+    public void testH5export_attrdataset()
+    {
+        int[] dset_data_expect = {66,  69,  72,  75,  78,  81,  96,  99,  102, 105, 108, 111,
+                                  126, 129, 132, 135, 138, 141, 156, 159, 162, 165, 168, 171,
+                                  186, 189, 192, 195, 198, 201, 216, 219, 222, 225, 228, 231,
+                                  207, 66,  252, 48,  84,  96,  12,  14,  213, 99};
+        int[] dset_indata      = new int[DIM_BLKS + DIM_PNTS];
+        String dsetName        = "/Dataset1";
+        String objName         = "Attribute1";
 
         _openH5File(H5_AREG_FILE, dsetName);
 
@@ -604,12 +640,12 @@ public class TestH5 {
         File file = new File(EXPORT_AREG_FILE);
 
         try {
-            Reader reader = new FileReader(EXPORT_AREG_FILE);
+            Reader reader                   = new FileReader(EXPORT_AREG_FILE);
             StreamTokenizer streamTokenizer = new StreamTokenizer(reader);
-            int indx = 0;
-            int jndx = 0;
-            while(streamTokenizer.nextToken() != StreamTokenizer.TT_EOF){
-                if(streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+            int indx                        = 0;
+            int jndx                        = 0;
+            while (streamTokenizer.nextToken() != StreamTokenizer.TT_EOF) {
+                if (streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
                     dset_indata[indx] = (int)streamTokenizer.nval;
                     indx++;
                 }
@@ -620,7 +656,8 @@ public class TestH5 {
             err.printStackTrace();
             fail("read file failed: " + err);
         }
-        for(int row = 0; row < DIM_X; row++)
-            assertTrue("testH5export_attrdataset: <"+row+">"+dset_indata[row], dset_indata[row]==dset_data_expect[row]);
+        for (int row = 0; row < DIM_X; row++)
+            assertTrue("testH5export_attrdataset: <" + row + ">" + dset_indata[row],
+                       dset_indata[row] == dset_data_expect[row]);
     }
 }
diff --git a/java/test/TestH5A.java b/java/test/TestH5A.java
index f2134d2..fed13ce 100644
--- a/java/test/TestH5A.java
+++ b/java/test/TestH5A.java
@@ -18,9 +18,8 @@ import static org.junit.Assert.assertNotNull;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
 
-import java.util.ArrayList;
-
 import java.io.File;
+import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
@@ -38,32 +37,39 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5A {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testA.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-    long type_id = HDF5Constants.H5I_INVALID_HID;
-    long space_id = HDF5Constants.H5I_INVALID_HID;
-    long lapl_id = HDF5Constants.H5I_INVALID_HID;
-    long aapl_id = HDF5Constants.H5I_INVALID_HID;
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X      = 4;
+    private static final int DIM_Y      = 6;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5did                          = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                       = {DIM_X, DIM_Y};
+    long type_id                        = HDF5Constants.H5I_INVALID_HID;
+    long space_id                       = HDF5Constants.H5I_INVALID_HID;
+    long lapl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long aapl_id                        = HDF5Constants.H5I_INVALID_HID;
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -75,18 +81,18 @@ public class TestH5A {
     }
 
     @Before
-    public void createH5file() throws NullPointerException, HDF5Exception {
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
         assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
             assertTrue("TestH5A.createH5file: H5.H5Fcreate: ", H5fid > 0);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
             assertTrue("TestH5A.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
-            H5did = _createDataset(H5fid, H5dsid, "dset",
-                    HDF5Constants.H5P_DEFAULT);
+            H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
             assertTrue("TestH5A.createH5file: _createDataset: ", H5did > 0);
             space_id = H5.H5Screate(HDF5Constants.H5S_NULL);
             assertTrue(space_id > 0);
@@ -108,32 +114,63 @@ public class TestH5A {
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did > 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
 
         if (type_id > 0)
-            try {H5.H5Tclose(type_id);} catch (Exception ex) {}
+            try {
+                H5.H5Tclose(type_id);
+            }
+            catch (Exception ex) {
+            }
         if (space_id > 0)
-            try {H5.H5Sclose(space_id);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(space_id);
+            }
+            catch (Exception ex) {
+            }
         if (lapl_id > 0)
-            try {H5.H5Pclose(lapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(lapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (aapl_id > 0)
-            try {H5.H5Pclose(aapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(aapl_id);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
     @Test
-    public void testH5Acreate2() {
+    public void testH5Acreate2()
+    {
         long attr_id = HDF5Constants.H5I_INVALID_HID;
         try {
-            attr_id = H5.H5Acreate(H5did, "dset", type_id, space_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attr_id = H5.H5Acreate(H5did, "dset", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5Acreate2", attr_id >= 0);
         }
         catch (Throwable err) {
@@ -142,34 +179,40 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Acreate2_invalidobject() throws Throwable {
+    public void testH5Acreate2_invalidobject() throws Throwable
+    {
         H5.H5Acreate(H5dsid, "dset", type_id, space_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Acreate2_nullname() throws Throwable {
+    public void testH5Acreate2_nullname() throws Throwable
+    {
         H5.H5Acreate(H5did, null, type_id, space_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Aopen() {
-        String attr_name = "dset";
+    public void testH5Aopen()
+    {
+        String attr_name  = "dset";
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
+        long attr_id      = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr_id = H5.H5Acreate(H5did, attr_name, type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attr_id = H5.H5Acreate(H5did, attr_name, type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
 
             // Opening the existing attribute, attr_name(Created by H5ACreate2)
             // attached to an object identifier.
-            attribute_id = H5.H5Aopen(H5did, attr_name,
-                    HDF5Constants.H5P_DEFAULT);
+            attribute_id = H5.H5Aopen(H5did, attr_name, HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5Aopen: H5Aopen", attribute_id >= 0);
         }
         catch (Throwable err) {
@@ -178,35 +221,45 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Aopen_invalidname() throws Throwable {
+    public void testH5Aopen_invalidname() throws Throwable
+    {
         H5.H5Aopen(H5did, "attr_name", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Aopen_by_idx() {
-        long loc_id = H5did;
-        String obj_name = ".";
-        int idx_type = HDF5Constants.H5_INDEX_CRT_ORDER;
-        int order = HDF5Constants.H5_ITER_INC;
-        long n = 0;
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Aopen_by_idx()
+    {
+        long loc_id       = H5did;
+        String obj_name   = ".";
+        int idx_type      = HDF5Constants.H5_INDEX_CRT_ORDER;
+        int order         = HDF5Constants.H5_ITER_INC;
+        long n            = 0;
+        long attr_id      = HDF5Constants.H5I_INVALID_HID;
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr_id = H5.H5Acreate(H5did, "file", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attr_id = H5.H5Acreate(H5did, "file", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
 
             // Opening the existing attribute, obj_name(Created by H5ACreate2)
             // by index, attached to an object identifier.
-            attribute_id = H5.H5Aopen_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC,
-                    0, aapl_id, lapl_id);
+            attribute_id = H5.H5Aopen_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                             HDF5Constants.H5_ITER_INC, 0, aapl_id, lapl_id);
 
             assertTrue("testH5Aopen_by_idx: H5Aopen_by_idx", attribute_id >= 0);
 
@@ -215,29 +268,29 @@ public class TestH5A {
             // with n=5 and we do not have 5 attributes created.
             try {
                 n = 5;
-                H5.H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n,
-                        aapl_id, lapl_id);
+                H5.H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n, aapl_id, lapl_id);
                 fail("Negative Test Failed:- Error not Thrown when n is invalid.");
             }
             catch (AssertionError err) {
                 fail("H5.H5Aopen_by_idx: " + err);
             }
-            catch (HDF5LibraryException err) {}
+            catch (HDF5LibraryException err) {
+            }
 
             // Negative test- Error should be thrown when H5Aopen_by_idx is
             // called
             // with an invalid object name(which hasn't been created).
             try {
-                n = 0;
+                n        = 0;
                 obj_name = "file";
-                H5.H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n,
-                        aapl_id, lapl_id);
+                H5.H5Aopen_by_idx(loc_id, obj_name, idx_type, order, n, aapl_id, lapl_id);
                 fail("Negative Test Failed:- Error not Thrown when attribute name is invalid.");
             }
             catch (AssertionError err) {
                 fail("H5.H5Aopen_by_idx: " + err);
             }
-            catch (HDF5LibraryException err) {}
+            catch (HDF5LibraryException err) {
+            }
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -245,32 +298,37 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Acreate_by_name() {
-        String obj_name = ".";
-        String attr_name = "DATASET";
+    public void testH5Acreate_by_name()
+    {
+        String obj_name   = ".";
+        String attr_name  = "DATASET";
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
-        boolean bool_val = false;
+        boolean bool_val  = false;
 
         try {
-            attribute_id = H5.H5Acreate_by_name(H5fid, obj_name, attr_name,
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    aapl_id, lapl_id);
-            assertTrue("testH5Acreate_by_name: H5Acreate_by_name",
-                    attribute_id >= 0);
+            attribute_id = H5.H5Acreate_by_name(H5fid, obj_name, attr_name, type_id, space_id,
+                                                HDF5Constants.H5P_DEFAULT, aapl_id, lapl_id);
+            assertTrue("testH5Acreate_by_name: H5Acreate_by_name", attribute_id >= 0);
 
             // Check if the name of attribute attached to the object specified
             // by loc_id and obj_name exists.It should be true.
-            bool_val = H5.H5Aexists_by_name(H5fid, obj_name, attr_name,
-                    lapl_id);
-            assertTrue("testH5Acreate_by_name: H5Aexists_by_name",
-                    bool_val == true);
+            bool_val = H5.H5Aexists_by_name(H5fid, obj_name, attr_name, lapl_id);
+            assertTrue("testH5Acreate_by_name: H5Aexists_by_name", bool_val == true);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -278,21 +336,27 @@ public class TestH5A {
         }
         finally {
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Arename() throws Throwable, HDF5LibraryException, NullPointerException {
-        long loc_id = H5fid;
+    public void testH5Arename() throws Throwable, HDF5LibraryException, NullPointerException
+    {
+        long loc_id          = H5fid;
         String old_attr_name = "old";
         String new_attr_name = "new";
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
-        int ret_val = -1;
-        boolean bool_val = false;
+        long attr_id         = HDF5Constants.H5I_INVALID_HID;
+        int ret_val          = -1;
+        boolean bool_val     = false;
 
         try {
-            attr_id = H5.H5Acreate(loc_id, old_attr_name, type_id, space_id, HDF5Constants.H5P_DEFAULT, aapl_id);
+            attr_id =
+                H5.H5Acreate(loc_id, old_attr_name, type_id, space_id, HDF5Constants.H5P_DEFAULT, aapl_id);
 
             ret_val = H5.H5Arename(loc_id, old_attr_name, new_attr_name);
 
@@ -315,41 +379,42 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Arename_by_name() {
-        long loc_id = H5fid;
-        String obj_name = ".";
+    public void testH5Arename_by_name()
+    {
+        long loc_id          = H5fid;
+        String obj_name      = ".";
         String old_attr_name = "old";
         String new_attr_name = "new";
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
-        int ret_val = -1;
-        boolean bool_val = false;
+        long attr_id         = HDF5Constants.H5I_INVALID_HID;
+        int ret_val          = -1;
+        boolean bool_val     = false;
 
         try {
-            attr_id = H5.H5Acreate_by_name(loc_id, obj_name, old_attr_name,
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT, aapl_id, lapl_id);
+            attr_id = H5.H5Acreate_by_name(loc_id, obj_name, old_attr_name, type_id, space_id,
+                                           HDF5Constants.H5P_DEFAULT, aapl_id, lapl_id);
 
-            ret_val = H5.H5Arename_by_name(loc_id, obj_name, old_attr_name,
-                    new_attr_name, lapl_id);
+            ret_val = H5.H5Arename_by_name(loc_id, obj_name, old_attr_name, new_attr_name, lapl_id);
 
             // Check the return value.It should be non negative.
             assertTrue("testH5Arename_by_name: H5Arename_by_name", ret_val >= 0);
 
             // Check if the new name of attribute attached to the object
             // specified by loc_id and obj_name exists.It should be true.
-            bool_val = H5.H5Aexists_by_name(loc_id, obj_name, new_attr_name,
-                    lapl_id);
-            assertTrue("testH5Arename_by_name: H5Aexists_by_name",
-                    bool_val == true);
+            bool_val = H5.H5Aexists_by_name(loc_id, obj_name, new_attr_name, lapl_id);
+            assertTrue("testH5Arename_by_name: H5Aexists_by_name", bool_val == true);
 
             // Check if the old name of attribute attached to the object
             // specified by loc_id and obj_name exists. It should equal false.
-            bool_val = H5.H5Aexists_by_name(loc_id, obj_name, old_attr_name,
-                    lapl_id);
+            bool_val = H5.H5Aexists_by_name(loc_id, obj_name, old_attr_name, lapl_id);
             assertEquals(bool_val, false);
         }
         catch (Throwable err) {
@@ -358,21 +423,25 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_name() {
-        String obj_name = ".";
-        String attr_name = "DATASET1";
-        String ret_name = null;
+    public void testH5Aget_name()
+    {
+        String obj_name   = ".";
+        String attr_name  = "DATASET1";
+        String ret_name   = null;
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attribute_id = H5.H5Acreate_by_name(H5fid, obj_name, attr_name,
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    aapl_id, lapl_id);
+            attribute_id = H5.H5Acreate_by_name(H5fid, obj_name, attr_name, type_id, space_id,
+                                                HDF5Constants.H5P_DEFAULT, aapl_id, lapl_id);
             assertTrue("testH5Aget_name: H5Acreate_by_name ", attribute_id > 0);
             ret_name = H5.H5Aget_name(attribute_id);
             assertEquals(ret_name, attr_name);
@@ -383,40 +452,40 @@ public class TestH5A {
         }
         finally {
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
-
     @Test
-    public void testH5Aget_name_by_idx() {
-        long loc_id = H5fid;
-        String obj_name = ".";
+    public void testH5Aget_name_by_idx()
+    {
+        long loc_id      = H5fid;
+        String obj_name  = ".";
         String attr_name = "DATASET1", attr2_name = "DATASET2";
         String ret_name = null;
-        int idx_type = HDF5Constants.H5_INDEX_NAME;
-        int order = HDF5Constants.H5_ITER_INC;
-        int n = 0;
-        long attr1_id = HDF5Constants.H5I_INVALID_HID;
-        long attr2_id = HDF5Constants.H5I_INVALID_HID;
+        int idx_type    = HDF5Constants.H5_INDEX_NAME;
+        int order       = HDF5Constants.H5_ITER_INC;
+        int n           = 0;
+        long attr1_id   = HDF5Constants.H5I_INVALID_HID;
+        long attr2_id   = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr1_id = H5.H5Acreate_by_name(loc_id, obj_name, attr_name,
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr2_id = H5.H5Acreate_by_name(loc_id, obj_name, attr2_name,
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr1_id = H5.H5Acreate_by_name(loc_id, obj_name, attr_name, type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr2_id = H5.H5Acreate_by_name(loc_id, obj_name, attr2_name, type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
 
             // getting the 1st attribute name(n=0).
-            ret_name = H5.H5Aget_name_by_idx(loc_id, obj_name, idx_type, order,
-                    n, lapl_id);
+            ret_name = H5.H5Aget_name_by_idx(loc_id, obj_name, idx_type, order, n, lapl_id);
             assertFalse("H5Aget_name_by_idx ", ret_name == null);
             assertEquals(ret_name, attr_name);
 
             // getting the second attribute name(n=1)
-            ret_name = H5.H5Aget_name_by_idx(loc_id, obj_name, idx_type, order,
-                    1, lapl_id);
+            ret_name = H5.H5Aget_name_by_idx(loc_id, obj_name, idx_type, order, 1, lapl_id);
             assertFalse("H5Aget_name_by_idx ", ret_name == null);
             assertEquals(ret_name, attr2_name);
         }
@@ -426,20 +495,29 @@ public class TestH5A {
         }
         finally {
             if (attr1_id > 0)
-                try {H5.H5Aclose(attr1_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr1_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_storage_size() {
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Aget_storage_size()
+    {
+        long attr_id   = HDF5Constants.H5I_INVALID_HID;
         long attr_size = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr_id = H5.H5Acreate(H5did, "dset", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attr_id = H5.H5Acreate(H5did, "dset", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
 
             attr_size = H5.H5Aget_storage_size(attr_id);
             assertTrue("The size of attribute is :", attr_size == 0);
@@ -450,27 +528,31 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_info() {
+    public void testH5Aget_info()
+    {
         H5A_info_t attr_info = null;
-        long attribute_id = HDF5Constants.H5I_INVALID_HID;
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
+        long attribute_id    = HDF5Constants.H5I_INVALID_HID;
+        long attr_id         = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr_id = H5.H5Acreate(H5did, "dset", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attr_id      = H5.H5Acreate(H5did, "dset", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
             attribute_id = H5.H5Aopen(H5did, "dset", HDF5Constants.H5P_DEFAULT);
             // Calling H5Aget_info with attribute_id returned from H5Aopen.
             attr_info = H5.H5Aget_info(attribute_id);
             assertFalse("H5Aget_info ", attr_info == null);
-            assertTrue("Corder_Valid should be false",
-                    attr_info.corder_valid == false);
+            assertTrue("Corder_Valid should be false", attr_info.corder_valid == false);
             assertTrue("Character set used for attribute name",
-                    attr_info.cset == HDF5Constants.H5T_CSET_ASCII);
+                       attr_info.cset == HDF5Constants.H5T_CSET_ASCII);
             assertTrue("Corder ", attr_info.corder == 0);
             assertEquals(attr_info.data_size, H5.H5Aget_storage_size(attr_id));
         }
@@ -480,34 +562,40 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_info1() {
+    public void testH5Aget_info1()
+    {
         H5A_info_t attr_info = null;
-        long attribute_id = HDF5Constants.H5I_INVALID_HID;
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
-        int order = HDF5Constants.H5_ITER_INC;
+        long attribute_id    = HDF5Constants.H5I_INVALID_HID;
+        long attr_id         = HDF5Constants.H5I_INVALID_HID;
+        int order            = HDF5Constants.H5_ITER_INC;
 
         try {
-            attr_id = H5.H5Acreate(H5did, ".", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            attribute_id = H5.H5Aopen_by_idx(H5did, ".",
-                    HDF5Constants.H5_INDEX_CRT_ORDER, order, 0,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr_id      = H5.H5Acreate(H5did, ".", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
+            attribute_id = H5.H5Aopen_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER, order, 0,
+                                             HDF5Constants.H5P_DEFAULT, lapl_id);
             // Calling H5Aget_info with attribute_id returned from
             // H5Aopen_by_idx.
             attr_info = H5.H5Aget_info(attribute_id);
 
             assertFalse("H5Aget_info ", attr_info == null);
-            assertTrue("Corder_Valid should be true",
-                    attr_info.corder_valid == true);
-            assertTrue("Character set",
-                    attr_info.cset == HDF5Constants.H5T_CSET_ASCII);
+            assertTrue("Corder_Valid should be true", attr_info.corder_valid == true);
+            assertTrue("Character set", attr_info.cset == HDF5Constants.H5T_CSET_ASCII);
             assertTrue("Corder ", attr_info.corder == 0);
             assertEquals(attr_info.data_size, H5.H5Aget_storage_size(attr_id));
         }
@@ -517,55 +605,81 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_info_by_idx() {
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
-        long attr2_id = HDF5Constants.H5I_INVALID_HID;;
+    public void testH5Aget_info_by_idx()
+    {
+        long attr_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr2_id = HDF5Constants.H5I_INVALID_HID;
+        ;
         H5A_info_t attr_info = null;
 
         try {
-            attr_id = H5.H5Acreate(H5did, "dset1", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            attr2_id = H5.H5Acreate(H5did, "dataset2", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-
-            //Verify info for 1st attribute, in increasing creation order
-            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, lapl_id);
+            attr_id  = H5.H5Acreate(H5did, "dset1", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
+            attr2_id = H5.H5Acreate(H5did, "dataset2", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                    HDF5Constants.H5P_DEFAULT);
+
+            // Verify info for 1st attribute, in increasing creation order
+            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 0, lapl_id);
             assertNotNull(attr_info);
-            assertTrue("Corder ", attr_info.corder == 0);//should equal 0 as this is the order of 1st attribute created.
+            assertTrue("Corder ",
+                       attr_info.corder ==
+                           0); // should equal 0 as this is the order of 1st attribute created.
             assertEquals(attr_info.data_size, H5.H5Aget_storage_size(attr_id));
 
-            //Verify info for 2nd attribute, in increasing creation order
-            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 1, lapl_id);
+            // Verify info for 2nd attribute, in increasing creation order
+            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 1, lapl_id);
             assertNotNull(attr_info);
             assertTrue("Corder", attr_info.corder == 1);
             assertEquals(attr_info.data_size, H5.H5Aget_storage_size(attr2_id));
 
-            //verify info for 2nd attribute, in decreasing creation order
-            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_DEC, 0, lapl_id);
+            // verify info for 2nd attribute, in decreasing creation order
+            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_DEC, 0, lapl_id);
             assertNotNull(attr_info);
-            assertTrue("Corder", attr_info.corder == 1); //should equal 1 as this is the order of 2nd attribute created.
+            assertTrue("Corder",
+                       attr_info.corder ==
+                           1); // should equal 1 as this is the order of 2nd attribute created.
 
-            //verify info for 1st attribute, in decreasing creation order
-            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_DEC, 1, lapl_id);
+            // verify info for 1st attribute, in decreasing creation order
+            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_DEC, 1, lapl_id);
             assertNotNull(attr_info);
-            assertTrue("Corder", attr_info.corder == 0); //should equal 0 as this is the order of 1st attribute created.
+            assertTrue("Corder",
+                       attr_info.corder ==
+                           0); // should equal 0 as this is the order of 1st attribute created.
 
-            //verify info for 1st attribute, in increasing name order
-            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 1, lapl_id);
+            // verify info for 1st attribute, in increasing name order
+            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 1, lapl_id);
             assertNotNull(attr_info);
-            assertTrue("Corder", attr_info.corder == 0); //should equal 0 as this is the order of 1st attribute created.
+            assertTrue("Corder",
+                       attr_info.corder ==
+                           0); // should equal 0 as this is the order of 1st attribute created.
 
-            //verify info for 2nd attribute, in decreasing name order
-            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_DEC, 1, lapl_id);
+            // verify info for 2nd attribute, in decreasing name order
+            attr_info = H5.H5Aget_info_by_idx(H5did, ".", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_DEC, 1, lapl_id);
             assertNotNull(attr_info);
-            assertTrue("Corder", attr_info.corder == 1); //should equal 1 as this is the order of 2nd attribute created.
+            assertTrue("Corder",
+                       attr_info.corder ==
+                           1); // should equal 1 as this is the order of 2nd attribute created.
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -573,25 +687,32 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_info_by_name() {
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Aget_info_by_name()
+    {
+        long attr_id         = HDF5Constants.H5I_INVALID_HID;
         H5A_info_t attr_info = null;
-        String obj_name = ".";
-        String attr_name = "DATASET";
+        String obj_name      = ".";
+        String attr_name     = "DATASET";
 
         try {
-            attr_id = H5.H5Acreate_by_name(H5fid, obj_name, attr_name, type_id,
-                    space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr_info = H5.H5Aget_info_by_name(H5fid, obj_name, attr_name,
-                    lapl_id);
+            attr_id   = H5.H5Acreate_by_name(H5fid, obj_name, attr_name, type_id, space_id,
+                                           HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr_info = H5.H5Aget_info_by_name(H5fid, obj_name, attr_name, lapl_id);
             assertNotNull(attr_info);
         }
         catch (Throwable err) {
@@ -600,41 +721,45 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Adelete_by_name() {
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
-        int ret_val = -1;
+    public void testH5Adelete_by_name()
+    {
+        long attr_id     = HDF5Constants.H5I_INVALID_HID;
+        int ret_val      = -1;
         boolean bool_val = false;
-        boolean exists = false;
+        boolean exists   = false;
 
         try {
-            attr_id = H5.H5Acreate_by_name(H5fid, ".", "DATASET",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr_id = H5.H5Acreate_by_name(H5fid, ".", "DATASET", type_id, space_id,
+                                           HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
             ret_val = H5.H5Adelete_by_name(H5fid, ".", "DATASET", lapl_id);
             assertTrue("H5Adelete_by_name", ret_val >= 0);
 
             // Check if the Attribute still exists.
-            bool_val = H5.H5Aexists_by_name(H5fid, ".", "DATASET",
-                    lapl_id);
+            bool_val = H5.H5Aexists_by_name(H5fid, ".", "DATASET", lapl_id);
             assertFalse("testH5Adelete_by_name: H5Aexists_by_name", bool_val);
             exists = H5.H5Aexists(H5fid, "DATASET");
-            assertFalse("testH5Adelete_by_name: H5Aexists ",exists);
+            assertFalse("testH5Adelete_by_name: H5Aexists ", exists);
 
             // Negative test. Error thrown when we try to delete an attribute
             // that has already been deleted.
-            try{
+            try {
                 ret_val = H5.H5Adelete_by_name(H5fid, ".", "DATASET", lapl_id);
                 fail("Negative Test Failed: Error Not thrown.");
             }
             catch (AssertionError err) {
                 fail("H5.H5Adelete_by_name: " + err);
             }
-            catch (HDF5LibraryException err) {}
+            catch (HDF5LibraryException err) {
+            }
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -642,14 +767,19 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aexists() {
-        boolean exists = false;
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Aexists()
+    {
+        boolean exists    = false;
+        long attr_id      = HDF5Constants.H5I_INVALID_HID;
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
 
         try {
@@ -662,14 +792,14 @@ public class TestH5A {
         assertFalse("H5Aexists ", exists);
 
         try {
-            attr_id = H5.H5Acreate(H5fid, "dset", type_id, space_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            exists = H5.H5Aexists(H5fid, "dset");
+            attr_id = H5.H5Acreate(H5fid, "dset", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
+            exists  = H5.H5Aexists(H5fid, "dset");
             assertTrue("H5Aexists ", exists);
 
-            attribute_id = H5.H5Acreate_by_name(H5fid, ".", "attribute",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attribute_id =
+                H5.H5Acreate_by_name(H5fid, ".", "attribute", type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                     HDF5Constants.H5P_DEFAULT, lapl_id);
             exists = H5.H5Aexists(H5fid, "attribute");
             assertTrue("H5Aexists ", exists);
         }
@@ -679,35 +809,41 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Adelete_by_idx_order() {
+    public void testH5Adelete_by_idx_order()
+    {
         boolean exists = false;
-        long attr1_id = HDF5Constants.H5I_INVALID_HID;
-        long attr2_id = HDF5Constants.H5I_INVALID_HID;
-        long attr3_id = HDF5Constants.H5I_INVALID_HID;
-        long attr4_id = HDF5Constants.H5I_INVALID_HID;
+        long attr1_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr2_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr3_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr4_id  = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr4_id = H5.H5Acreate_by_name(H5fid, ".", "attribute4",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-
-            H5.H5Adelete_by_idx(H5fid, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 3, lapl_id);
+            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr4_id = H5.H5Acreate_by_name(H5fid, ".", "attribute4", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+
+            H5.H5Adelete_by_idx(H5fid, ".", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 3,
+                                lapl_id);
             exists = H5.H5Aexists(H5fid, "attribute4");
             assertFalse("H5Adelete_by_idx: H5Aexists", exists);
         }
@@ -717,34 +853,49 @@ public class TestH5A {
         }
         finally {
             if (attr1_id > 0)
-                try {H5.H5Aclose(attr1_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr1_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr3_id > 0)
-                try {H5.H5Aclose(attr3_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr3_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr4_id > 0)
-                try {H5.H5Aclose(attr4_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr4_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Adelete_by_idx_name1() {
+    public void testH5Adelete_by_idx_name1()
+    {
         boolean exists = false;
-        long attr1_id = HDF5Constants.H5I_INVALID_HID;
-        long attr2_id = HDF5Constants.H5I_INVALID_HID;
-        long attr3_id = HDF5Constants.H5I_INVALID_HID;
+        long attr1_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr2_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr3_id  = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            H5.H5Adelete_by_idx(H5fid, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, lapl_id);
+            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            H5.H5Adelete_by_idx(H5fid, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2,
+                                lapl_id);
             exists = H5.H5Aexists(H5fid, "attribute3");
             assertFalse("H5Adelete_by_idx: H5Aexists", exists);
         }
@@ -754,37 +905,47 @@ public class TestH5A {
         }
         finally {
             if (attr1_id > 0)
-                try {H5.H5Aclose(attr1_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr1_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr3_id > 0)
-                try {H5.H5Aclose(attr3_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr3_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Adelete_by_idx_name2() {
+    public void testH5Adelete_by_idx_name2()
+    {
         boolean exists = false;
-        long attr1_id = HDF5Constants.H5I_INVALID_HID;
-        long attr2_id = HDF5Constants.H5I_INVALID_HID;
-        long attr3_id = HDF5Constants.H5I_INVALID_HID;
-        long attr4_id = HDF5Constants.H5I_INVALID_HID;
+        long attr1_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr2_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr3_id  = HDF5Constants.H5I_INVALID_HID;
+        long attr4_id  = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr4_id = H5.H5Acreate_by_name(H5fid, ".", "attribute4",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-
-            H5.H5Adelete_by_idx(H5fid, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_DEC, 3, lapl_id);
+            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr4_id = H5.H5Acreate_by_name(H5fid, ".", "attribute4", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+
+            H5.H5Adelete_by_idx(H5fid, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_DEC, 3,
+                                lapl_id);
             exists = H5.H5Aexists(H5fid, "attribute1");
             assertFalse("H5Adelete_by_idx: H5Aexists", exists);
         }
@@ -794,47 +955,66 @@ public class TestH5A {
         }
         finally {
             if (attr1_id > 0)
-                try {H5.H5Aclose(attr1_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr1_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr3_id > 0)
-                try {H5.H5Aclose(attr3_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr3_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr4_id > 0)
-                try {H5.H5Aclose(attr4_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr4_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Adelete_by_idx_null() throws Throwable {
-        H5.H5Adelete_by_idx(H5fid, null, HDF5Constants.H5_INDEX_CRT_ORDER,
-                HDF5Constants.H5_ITER_INC, 0, lapl_id);
+    public void testH5Adelete_by_idx_null() throws Throwable
+    {
+        H5.H5Adelete_by_idx(H5fid, null, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                            lapl_id);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Adelete_by_idx_invalidobject() throws Throwable {
-        H5.H5Adelete_by_idx(H5fid, "invalid", HDF5Constants.H5_INDEX_CRT_ORDER,
-                HDF5Constants.H5_ITER_INC, 0, lapl_id);
+    public void testH5Adelete_by_idx_invalidobject() throws Throwable
+    {
+        H5.H5Adelete_by_idx(H5fid, "invalid", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                            lapl_id);
     }
 
     @Test
-    public void testH5Aopen_by_name() {
-        String obj_name = ".";
-        String attr_name = "DATASET";
+    public void testH5Aopen_by_name()
+    {
+        String obj_name   = ".";
+        String attr_name  = "DATASET";
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
-        long aid = HDF5Constants.H5I_INVALID_HID;
+        long aid          = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            attribute_id = H5.H5Acreate_by_name(H5fid, obj_name, attr_name,
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attribute_id =
+                H5.H5Acreate_by_name(H5fid, obj_name, attr_name, type_id, space_id, HDF5Constants.H5P_DEFAULT,
+                                     HDF5Constants.H5P_DEFAULT, lapl_id);
 
-            //open Attribute by name
-            if(attribute_id >= 0) {
+            // open Attribute by name
+            if (attribute_id >= 0) {
                 try {
                     aid = H5.H5Aopen_by_name(H5fid, obj_name, attr_name, HDF5Constants.H5P_DEFAULT, lapl_id);
-                    assertTrue("testH5Aopen_by_name: ", aid>=0);
+                    assertTrue("testH5Aopen_by_name: ", aid >= 0);
                 }
-                catch(Throwable err) {
+                catch (Throwable err) {
                     err.printStackTrace();
                     fail("H5.H5Aopen_by_name " + err);
                 }
@@ -846,21 +1026,30 @@ public class TestH5A {
         }
         finally {
             if (aid > 0)
-                try {H5.H5Aclose(aid);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(aid);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Awrite_readVL() {
-        String attr_name = "VLdata";
-        long attr_id = HDF5Constants.H5I_INVALID_HID;
-        long atype_id = HDF5Constants.H5I_INVALID_HID;
-        long aspace_id = HDF5Constants.H5I_INVALID_HID;
-        String[] str_data = { "Parting", "is such", "sweet", "sorrow." };
-        long[] dims = { str_data.length };
-        long lsize = 1;
+    public void testH5Awrite_readVL()
+    {
+        String attr_name  = "VLdata";
+        long attr_id      = HDF5Constants.H5I_INVALID_HID;
+        long atype_id     = HDF5Constants.H5I_INVALID_HID;
+        long aspace_id    = HDF5Constants.H5I_INVALID_HID;
+        String[] str_data = {"Parting", "is such", "sweet", "sorrow."};
+        long[] dims       = {str_data.length};
+        long lsize        = 1;
 
         try {
             atype_id = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
@@ -870,7 +1059,11 @@ public class TestH5A {
         }
         catch (Exception err) {
             if (atype_id > 0)
-                try {H5.H5Tclose(atype_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(atype_id);
+                }
+                catch (Exception ex) {
+                }
             err.printStackTrace();
             fail("H5.testH5Awrite_readVL: " + err);
         }
@@ -878,8 +1071,8 @@ public class TestH5A {
         try {
             aspace_id = H5.H5Screate_simple(1, dims, null);
             assertTrue(aspace_id > 0);
-            attr_id = H5.H5Acreate(H5did, attr_name, atype_id, aspace_id,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attr_id = H5.H5Acreate(H5did, attr_name, atype_id, aspace_id, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5Awrite_readVL: ", attr_id >= 0);
 
             H5.H5AwriteVL(attr_id, atype_id, str_data);
@@ -889,7 +1082,7 @@ public class TestH5A {
             for (int j = 0; j < dims.length; j++) {
                 lsize *= dims[j];
             }
-            String[] strs = new String[(int) lsize];
+            String[] strs = new String[(int)lsize];
             for (int j = 0; j < lsize; j++) {
                 strs[j] = "";
             }
@@ -910,19 +1103,32 @@ public class TestH5A {
         }
         finally {
             if (attr_id > 0)
-                try {H5.H5Aclose(attr_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr_id);
+                }
+                catch (Exception ex) {
+                }
             if (aspace_id > 0)
-                try {H5.H5Sclose(aspace_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(aspace_id);
+                }
+                catch (Exception ex) {
+                }
             if (atype_id > 0)
-                try {H5.H5Tclose(atype_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(atype_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aget_create_plist() {
-        String attr_name = "DATASET1";
+    public void testH5Aget_create_plist()
+    {
+        String attr_name  = "DATASET1";
         int char_encoding = 0;
-        long plist_id = HDF5Constants.H5I_INVALID_HID;
+        long plist_id     = HDF5Constants.H5I_INVALID_HID;
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
 
         try {
@@ -942,11 +1148,13 @@ public class TestH5A {
                 err.printStackTrace();
                 fail("H5Pget_char_encoding: " + err);
             }
-            assertTrue("testH5Aget_create_plist: get_char_encoding", char_encoding == HDF5Constants.H5T_CSET_ASCII);
+            assertTrue("testH5Aget_create_plist: get_char_encoding",
+                       char_encoding == HDF5Constants.H5T_CSET_ASCII);
 
             // Create an attribute for the dataset using the property list
             try {
-                attribute_id = H5.H5Acreate(H5fid, attr_name, type_id, space_id, plist_id, HDF5Constants.H5P_DEFAULT);
+                attribute_id =
+                    H5.H5Acreate(H5fid, attr_name, type_id, space_id, plist_id, HDF5Constants.H5P_DEFAULT);
                 assertTrue("testH5Aget_create_plist: H5Acreate", attribute_id >= 0);
             }
             catch (Throwable err) {
@@ -967,7 +1175,8 @@ public class TestH5A {
                 err.printStackTrace();
                 fail("H5Pget_char_encoding: " + err);
             }
-            assertTrue("testH5Aget_create_plist: get_char_encoding", char_encoding == HDF5Constants.H5T_CSET_ASCII);
+            assertTrue("testH5Aget_create_plist: get_char_encoding",
+                       char_encoding == HDF5Constants.H5T_CSET_ASCII);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -975,14 +1184,23 @@ public class TestH5A {
         }
         finally {
             if (plist_id > 0)
-                try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Pclose(plist_id);
+                }
+                catch (Exception ex) {
+                }
             if (attribute_id > 0)
-                try {H5.H5Aclose(attribute_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aiterate() {
+    public void testH5Aiterate()
+    {
         long attr1_id = HDF5Constants.H5I_INVALID_HID;
         long attr2_id = HDF5Constants.H5I_INVALID_HID;
         long attr3_id = HDF5Constants.H5I_INVALID_HID;
@@ -990,48 +1208,56 @@ public class TestH5A {
 
         class idata {
             public String attr_name = null;
-            idata(String name) {
-                this.attr_name = name;
-            }
+            idata(String name) { this.attr_name = name; }
         }
         class H5A_iter_data implements H5A_iterate_t {
             public ArrayList iterdata = new ArrayList();
         }
         H5A_iterate_t iter_data = new H5A_iter_data();
         class H5A_iter_callback implements H5A_iterate_cb {
-            public int callback(long group, String name, H5A_info_t info, H5A_iterate_t op_data) {
+            public int callback(long group, String name, H5A_info_t info, H5A_iterate_t op_data)
+            {
                 idata id = new idata(name);
                 ((H5A_iter_data)op_data).iterdata.add(id);
                 return 0;
             }
         }
         try {
-            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr4_id = H5.H5Acreate_by_name(H5fid, ".", "attribute4",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr1_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute1", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr2_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute2", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr3_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute3", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr4_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute4", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
             H5A_iterate_cb iter_cb = new H5A_iter_callback();
             try {
-                H5.H5Aiterate(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0L, iter_cb, iter_data);
+                H5.H5Aiterate(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0L, iter_cb,
+                              iter_data);
             }
             catch (Throwable err) {
                 err.printStackTrace();
                 fail("H5.H5Aiterate: " + err);
             }
-            assertFalse("H5Aiterate ",((H5A_iter_data)iter_data).iterdata.isEmpty());
-            assertTrue("H5Aiterate "+((H5A_iter_data)iter_data).iterdata.size(),((H5A_iter_data)iter_data).iterdata.size()==4);
-            assertTrue("H5Aiterate "+(((H5A_iter_data)iter_data).iterdata.get(0)).attr_name,(((H5A_iter_data)iter_data).iterdata.get(0)).attr_name.compareToIgnoreCase("attribute1")==0);
-            assertTrue("H5Aiterate "+(((H5A_iter_data)iter_data).iterdata.get(1)).attr_name,(((H5A_iter_data)iter_data).iterdata.get(1)).attr_name.compareToIgnoreCase("attribute2")==0);
-            assertTrue("H5Aiterate "+((idata)((H5A_iter_data)iter_data).iterdata.get(2)).attr_name,(((H5A_iter_data)iter_data).iterdata.get(2)).attr_name.compareToIgnoreCase("attribute3")==0);
-            assertTrue("H5Aiterate "+((idata)((H5A_iter_data)iter_data).iterdata.get(3)).attr_name,((idata)((H5A_iter_data)iter_data).iterdata.get(3)).attr_name.compareToIgnoreCase("attribute4")==0);
+            assertFalse("H5Aiterate ", ((H5A_iter_data)iter_data).iterdata.isEmpty());
+            assertTrue("H5Aiterate " + ((H5A_iter_data)iter_data).iterdata.size(),
+                       ((H5A_iter_data)iter_data).iterdata.size() == 4);
+            assertTrue(
+                "H5Aiterate " + (((H5A_iter_data)iter_data).iterdata.get(0)).attr_name,
+                (((H5A_iter_data)iter_data).iterdata.get(0)).attr_name.compareToIgnoreCase("attribute1") ==
+                    0);
+            assertTrue(
+                "H5Aiterate " + (((H5A_iter_data)iter_data).iterdata.get(1)).attr_name,
+                (((H5A_iter_data)iter_data).iterdata.get(1)).attr_name.compareToIgnoreCase("attribute2") ==
+                    0);
+            assertTrue(
+                "H5Aiterate " + ((idata)((H5A_iter_data)iter_data).iterdata.get(2)).attr_name,
+                (((H5A_iter_data)iter_data).iterdata.get(2)).attr_name.compareToIgnoreCase("attribute3") ==
+                    0);
+            assertTrue("H5Aiterate " + ((idata)((H5A_iter_data)iter_data).iterdata.get(3)).attr_name,
+                       ((idata)((H5A_iter_data)iter_data).iterdata.get(3))
+                               .attr_name.compareToIgnoreCase("attribute4") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1039,18 +1265,35 @@ public class TestH5A {
         }
         finally {
             if (attr1_id > 0)
-                try {H5.H5Aclose(attr1_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr1_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr3_id > 0)
-                try {H5.H5Aclose(attr3_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr3_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr4_id > 0)
-                try {H5.H5Aclose(attr4_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr4_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Aiterate_by_name() {
+    public void testH5Aiterate_by_name()
+    {
         long attr1_id = HDF5Constants.H5I_INVALID_HID;
         long attr2_id = HDF5Constants.H5I_INVALID_HID;
         long attr3_id = HDF5Constants.H5I_INVALID_HID;
@@ -1058,45 +1301,44 @@ public class TestH5A {
 
         class idata {
             public String attr_name = null;
-            idata(String name) {
-                this.attr_name = name;
-            }
+            idata(String name) { this.attr_name = name; }
         }
         class H5A_iter_data implements H5A_iterate_t {
             public ArrayList iterdata = new ArrayList();
         }
         H5A_iterate_t iter_data = new H5A_iter_data();
         class H5A_iter_callback implements H5A_iterate_cb {
-            public int callback(long group, String name, H5A_info_t info, H5A_iterate_t op_data) {
+            public int callback(long group, String name, H5A_info_t info, H5A_iterate_t op_data)
+            {
                 idata id = new idata(name);
                 ((H5A_iter_data)op_data).iterdata.add(id);
                 return 0;
             }
         }
         try {
-            attr1_id = H5.H5Acreate_by_name(H5fid, ".", "attribute4",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr2_id = H5.H5Acreate_by_name(H5fid, ".", "attribute3",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr3_id = H5.H5Acreate_by_name(H5fid, ".", "attribute2",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
-            attr4_id = H5.H5Acreate_by_name(H5fid, ".", "attribute1",
-                    type_id, space_id, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr1_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute4", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr2_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute3", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr3_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute2", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
+            attr4_id               = H5.H5Acreate_by_name(H5fid, ".", "attribute1", type_id, space_id,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, lapl_id);
             H5A_iterate_cb iter_cb = new H5A_iter_callback();
             try {
-                H5.H5Aiterate_by_name(H5fid, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT);
+                H5.H5Aiterate_by_name(H5fid, ".", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L,
+                                      iter_cb, iter_data, HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 err.printStackTrace();
                 fail("H5.H5Aiterate_by_name: " + err);
             }
-            assertFalse("H5Aiterate_by_name ",((H5A_iter_data)iter_data).iterdata.isEmpty());
-            assertTrue("H5Aiterate_by_name "+((H5A_iter_data)iter_data).iterdata.size(),((H5A_iter_data)iter_data).iterdata.size()==4);
-            assertTrue("H5Aiterate_by_name "+((idata)((H5A_iter_data)iter_data).iterdata.get(1)).attr_name,((idata)((H5A_iter_data)iter_data).iterdata.get(1)).attr_name.compareToIgnoreCase("attribute2")==0);
+            assertFalse("H5Aiterate_by_name ", ((H5A_iter_data)iter_data).iterdata.isEmpty());
+            assertTrue("H5Aiterate_by_name " + ((H5A_iter_data)iter_data).iterdata.size(),
+                       ((H5A_iter_data)iter_data).iterdata.size() == 4);
+            assertTrue("H5Aiterate_by_name " + ((idata)((H5A_iter_data)iter_data).iterdata.get(1)).attr_name,
+                       ((idata)((H5A_iter_data)iter_data).iterdata.get(1))
+                               .attr_name.compareToIgnoreCase("attribute2") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1104,17 +1346,29 @@ public class TestH5A {
         }
         finally {
             if (attr1_id > 0)
-                try {H5.H5Aclose(attr1_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr1_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr2_id > 0)
-                try {H5.H5Aclose(attr2_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr2_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr3_id > 0)
-                try {H5.H5Aclose(attr3_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr3_id);
+                }
+                catch (Exception ex) {
+                }
             if (attr4_id > 0)
-                try {H5.H5Aclose(attr4_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Aclose(attr4_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
-
 }
-
-
-
diff --git a/java/test/TestH5Arw.java b/java/test/TestH5Arw.java
index 8ce2fee..56ac7f4 100644
--- a/java/test/TestH5Arw.java
+++ b/java/test/TestH5Arw.java
@@ -33,76 +33,103 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Arw {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname                 = new TestName();
     private static final String H5_INTS_FILE = "tintsattrs.h5";
     private static final String H5_FLTS_FILE = "tfloatsattrs.h5";
-    private static final int DIM_X = 8;
-    private static final int DIM8_Y = 8;
-    private static final int DIM16_Y = 16;
-    private static final int DIM32_Y = 32;
-    private static final int DIM64_Y = 64;
-    private static final int DIM128_Y = 128;
-    private static final String DATASETU08 = "DU08BITS";
-    private static final String DATASETS08 = "DS08BITS";
-    private static final String DATASETU16 = "DU16BITS";
-    private static final String DATASETS16 = "DS16BITS";
-    private static final String DATASETU32 = "DU32BITS";
-    private static final String DATASETS32 = "DS32BITS";
-    private static final String DATASETU64 = "DU64BITS";
-    private static final String DATASETS64 = "DS64BITS";
-    private static final String DATASETF32 = "DS32BITS";
-    private static final String DATASETF64 = "DS64BITS";
-    private static final String DATASETF128 = "DS128BITS";
-    private static final int RANK = 2;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5aid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-
-    private final void _closeH5file() throws HDF5LibraryException {
+    private static final int DIM_X           = 8;
+    private static final int DIM8_Y          = 8;
+    private static final int DIM16_Y         = 16;
+    private static final int DIM32_Y         = 32;
+    private static final int DIM64_Y         = 64;
+    private static final int DIM128_Y        = 128;
+    private static final String DATASETU08   = "DU08BITS";
+    private static final String DATASETS08   = "DS08BITS";
+    private static final String DATASETU16   = "DU16BITS";
+    private static final String DATASETS16   = "DS16BITS";
+    private static final String DATASETU32   = "DU32BITS";
+    private static final String DATASETS32   = "DS32BITS";
+    private static final String DATASETU64   = "DU64BITS";
+    private static final String DATASETS64   = "DS64BITS";
+    private static final String DATASETF32   = "DS32BITS";
+    private static final String DATASETF64   = "DS64BITS";
+    private static final String DATASETF128  = "DS128BITS";
+    private static final int RANK            = 2;
+    long H5fid                               = HDF5Constants.H5I_INVALID_HID;
+    long H5aid                               = HDF5Constants.H5I_INVALID_HID;
+    long H5did                               = HDF5Constants.H5I_INVALID_HID;
+
+    private final void _closeH5file() throws HDF5LibraryException
+    {
         if (H5aid >= 0)
-            try {H5.H5Aclose(H5aid);} catch (Exception ex) {}
+            try {
+                H5.H5Aclose(H5aid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
     }
 
-    public void openH5file(String filename, String dsetname) {
-       try {
-           H5fid = H5.H5Fopen(filename,
-                   HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5Arw._openH5file: " + err);
-       }
-       assertTrue("TestH5Arw._openH5file: H5.H5Fopen: ", H5fid >= 0);
-       try {
-           H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5Arw._openH5file: " + err);
-       }
-       assertTrue("TestH5Arw._openH5file: H5.H5Dopen: ", H5did >= 0);
-       try {
-           H5aid = H5.H5Aopen(H5did, dsetname, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5Arw._openH5file: " + err);
-       }
-       assertTrue("TestH5Arw._openH5file: H5.H5Aopen: ", H5aid >= 0);
+    public void openH5file(String filename, String dsetname)
+    {
+        try {
+            H5fid = H5.H5Fopen(filename, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5Arw._openH5file: " + err);
+        }
+        assertTrue("TestH5Arw._openH5file: H5.H5Fopen: ", H5fid >= 0);
+        try {
+            H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5Arw._openH5file: " + err);
+        }
+        assertTrue("TestH5Arw._openH5file: H5.H5Dopen: ", H5did >= 0);
+        try {
+            H5aid = H5.H5Aopen(H5did, dsetname, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5Arw._openH5file: " + err);
+        }
+        assertTrue("TestH5Arw._openH5file: H5.H5Aopen: ", H5aid >= 0);
     }
 
     @After
-    public void closeH5file() throws HDF5LibraryException {
+    public void closeH5file() throws HDF5LibraryException
+    {
         if (H5aid >= 0)
-            try {H5.H5Aclose(H5aid);} catch (Exception ex) {}
+            try {
+                H5.H5Aclose(H5aid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         H5fid = HDF5Constants.H5I_INVALID_HID;
         H5did = HDF5Constants.H5I_INVALID_HID;
         H5aid = HDF5Constants.H5I_INVALID_HID;
@@ -110,14 +137,15 @@ public class TestH5Arw {
     }
 
     @Before
-    public void verifyCount()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+    public void verifyCount() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
 
     @Test
-    public void testH5Aread_8bit_ints() {
+    public void testH5Aread_8bit_ints()
+    {
         byte[][] attr_data = new byte[DIM_X][DIM8_Y];
 
         try {
@@ -182,7 +210,8 @@ public class TestH5Arw {
     }
 
     @Test
-    public void testH5Aread_16bit_ints() {
+    public void testH5Aread_16bit_ints()
+    {
         short[][] attr_data = new short[DIM_X][DIM16_Y];
 
         try {
@@ -247,7 +276,8 @@ public class TestH5Arw {
     }
 
     @Test
-    public void testH5Aread_32bit_ints() {
+    public void testH5Aread_32bit_ints()
+    {
         int[][] attr_data = new int[DIM_X][DIM16_Y];
 
         try {
@@ -312,7 +342,8 @@ public class TestH5Arw {
     }
 
     @Test
-    public void testH5Aread_64bit_ints() {
+    public void testH5Aread_64bit_ints()
+    {
         long[][] attr_data = new long[DIM_X][DIM64_Y];
 
         try {
@@ -377,7 +408,8 @@ public class TestH5Arw {
     }
 
     @Test
-    public void testH5Aread_32bit_floats() {
+    public void testH5Aread_32bit_floats()
+    {
         float[][] attr_data = new float[DIM_X][DIM32_Y];
 
         try {
@@ -401,7 +433,8 @@ public class TestH5Arw {
     }
 
     @Test
-    public void testH5Aread_64bit_floats() {
+    public void testH5Aread_64bit_floats()
+    {
         double[][] attr_data = new double[DIM_X][DIM64_Y];
 
         try {
@@ -425,7 +458,8 @@ public class TestH5Arw {
     }
 
     @Test
-    public void testH5Aread_128bit_floats() {
+    public void testH5Aread_128bit_floats()
+    {
         byte[][][] attr_data = new byte[DIM_X][DIM128_Y][8];
 
         try {
@@ -445,5 +479,4 @@ public class TestH5Arw {
             fail("testH5Aread_128bit_floats: H5Aread: " + err);
         }
     }
-
 }
diff --git a/java/test/TestH5D.java b/java/test/TestH5D.java
index dac3a9c..4bab1a9 100644
--- a/java/test/TestH5D.java
+++ b/java/test/TestH5D.java
@@ -33,46 +33,50 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5D {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testD.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    private static final int RANK = 2;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5faplid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5dtid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long H5did0 = HDF5Constants.H5I_INVALID_HID;
-    long H5dcpl_id = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
+    private static final int DIM_X      = 4;
+    private static final int DIM_Y      = 6;
+    private static final int RANK       = 2;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5faplid                       = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5dtid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5did                          = HDF5Constants.H5I_INVALID_HID;
+    long H5did0                         = HDF5Constants.H5I_INVALID_HID;
+    long H5dcpl_id                      = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                       = {DIM_X, DIM_Y};
 
     // Values for the status of space allocation
     enum H5D_space_status {
-        H5D_SPACE_STATUS_ERROR(-1), H5D_SPACE_STATUS_NOT_ALLOCATED(0), H5D_SPACE_STATUS_PART_ALLOCATED(
-                1), H5D_SPACE_STATUS_ALLOCATED(2);
+        H5D_SPACE_STATUS_ERROR(-1),
+        H5D_SPACE_STATUS_NOT_ALLOCATED(0),
+        H5D_SPACE_STATUS_PART_ALLOCATED(1),
+        H5D_SPACE_STATUS_ALLOCATED(2);
 
         private int code;
 
-        H5D_space_status(int space_status) {
-            this.code = space_status;
-        }
+        H5D_space_status(int space_status) { this.code = space_status; }
 
-        public int getCode() {
-            return this.code;
-        }
+        public int getCode() { return this.code; }
     }
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();}
-            catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final void _createPDataset(long fid, long dsid, String name, long dcpl_val) {
+    private final void _createPDataset(long fid, long dsid, String name, long dcpl_val)
+    {
 
         try {
             H5dcpl_id = H5.H5Pcreate(dcpl_val);
@@ -94,9 +98,8 @@ public class TestH5D {
         }
 
         try {
-            H5did0 = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, H5dcpl_id, HDF5Constants.H5P_DEFAULT);
+            H5did0 = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                                  H5dcpl_id, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -105,7 +108,8 @@ public class TestH5D {
         assertTrue("TestH5D._createPDataset.H5Dcreate: ", H5did0 >= 0);
     }
 
-    private final void _createChunkDataset(long fid, long dsid, String name, long dapl) {
+    private final void _createChunkDataset(long fid, long dsid, String name, long dapl)
+    {
 
         try {
             H5dcpl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE);
@@ -127,9 +131,8 @@ public class TestH5D {
         }
 
         try {
-            H5did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, H5dcpl_id, dapl);
+            H5did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                                 H5dcpl_id, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -138,11 +141,11 @@ public class TestH5D {
         assertTrue("TestH5D._createChunkDataset.H5Dcreate: ", H5did >= 0);
     }
 
-    private final void _createDataset(long fid, long dsid, String name, long dapl) {
+    private final void _createDataset(long fid, long dsid, String name, long dapl)
+    {
         try {
-            H5did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            H5did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -151,7 +154,8 @@ public class TestH5D {
         assertTrue("TestH5D._createDataset.H5Dcreate: ", H5did >= 0);
     }
 
-    private final void _createVLDataset(long fid, long dsid, String name, long dapl) {
+    private final void _createVLDataset(long fid, long dsid, String name, long dapl)
+    {
         try {
             H5dtid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
         }
@@ -169,8 +173,8 @@ public class TestH5D {
             fail("H5.H5Tset_size: " + err);
         }
         try {
-            H5did = H5.H5Dcreate(fid, name, H5dtid, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            H5did = H5.H5Dcreate(fid, name, H5dtid, dsid, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -179,99 +183,153 @@ public class TestH5D {
         assertTrue("TestH5D._createVLDataset.H5Dcreate: ", H5did >= 0);
     }
 
-    private final void _closeH5file() throws HDF5LibraryException {
+    private final void _closeH5file() throws HDF5LibraryException
+    {
         if (H5dcpl_id >= 0)
-            try {H5.H5Pclose(H5dcpl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5dcpl_id);
+            }
+            catch (Exception ex) {
+            }
         if (H5did0 >= 0)
-            try {H5.H5Dclose(H5did0);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did0);
+            }
+            catch (Exception ex) {
+            }
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5dtid > 0)
-            try {H5.H5Tclose(H5dtid);} catch (Exception ex) {}
+            try {
+                H5.H5Tclose(H5dtid);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
     }
 
-    private final void _openH5file(String filename, String dsetname, long dapl) {
-       try {
-           H5fid = H5.H5Fopen(filename,
-                   HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5D._openH5file: " + err);
-       }
-       assertTrue("TestH5D._openH5file: H5.H5Fopen: ",H5fid >= 0);
-       try {
-           H5did = H5.H5Dopen(H5fid, dsetname, dapl);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5D._openH5file: " + err);
-       }
-       assertTrue("TestH5D._openH5file: H5.H5Dopen: ",H5did >= 0);
-       try {
-           H5dsid = H5.H5Dget_space(H5did);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5D._openH5file: " + err);
-       }
-       assertTrue("TestH5D._openH5file: H5.H5Screate_simple: ",H5dsid > 0);
+    private final void _openH5file(String filename, String dsetname, long dapl)
+    {
+        try {
+            H5fid = H5.H5Fopen(filename, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5D._openH5file: " + err);
+        }
+        assertTrue("TestH5D._openH5file: H5.H5Fopen: ", H5fid >= 0);
+        try {
+            H5did = H5.H5Dopen(H5fid, dsetname, dapl);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5D._openH5file: " + err);
+        }
+        assertTrue("TestH5D._openH5file: H5.H5Dopen: ", H5did >= 0);
+        try {
+            H5dsid = H5.H5Dget_space(H5did);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5D._openH5file: " + err);
+        }
+        assertTrue("TestH5D._openH5file: H5.H5Screate_simple: ", H5dsid > 0);
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-       assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
-       System.out.print(testname.getMethodName());
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
+        System.out.print(testname.getMethodName());
 
         try {
             H5faplid = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, H5faplid);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, H5faplid);
             H5dsid = H5.H5Screate_simple(RANK, H5dims, null);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5D.createH5file: " + err);
         }
-        assertTrue("TestH5D.createH5file: H5.H5Fcreate: ",H5fid >= 0);
-        assertTrue("TestH5D.createH5file: H5.H5Screate_simple: ",H5dsid >= 0);
+        assertTrue("TestH5D.createH5file: H5.H5Fcreate: ", H5fid >= 0);
+        assertTrue("TestH5D.createH5file: H5.H5Screate_simple: ", H5dsid >= 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5dcpl_id >= 0)
-            try {H5.H5Pclose(H5dcpl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5dcpl_id);
+            }
+            catch (Exception ex) {
+            }
         if (H5did0 >= 0)
-            try {H5.H5Dclose(H5did0);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did0);
+            }
+            catch (Exception ex) {
+            }
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5dtid > 0)
-            try {H5.H5Tclose(H5dtid);} catch (Exception ex) {}
+            try {
+                H5.H5Tclose(H5dtid);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5faplid >= 0)
-            try {H5.H5Pclose(H5faplid);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5faplid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
     @Test
-    public void testH5Dcreate() {
+    public void testH5Dcreate()
+    {
         long dataset_id = HDF5Constants.H5I_INVALID_HID;
         try {
-            dataset_id = H5.H5Dcreate(H5fid, "dset",
-                HDF5Constants.H5T_STD_I32BE, H5dsid,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            dataset_id =
+                H5.H5Dcreate(H5fid, "dset", HDF5Constants.H5T_STD_I32BE, H5dsid, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -290,11 +348,12 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dcreate_anon() {
+    public void testH5Dcreate_anon()
+    {
         long dataset_id = HDF5Constants.H5I_INVALID_HID;
         try {
-            dataset_id = H5.H5Dcreate_anon(H5fid, HDF5Constants.H5T_STD_I32BE,
-                    H5dsid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            dataset_id = H5.H5Dcreate_anon(H5fid, HDF5Constants.H5T_STD_I32BE, H5dsid,
+                                           HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -313,13 +372,14 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dopen() {
+    public void testH5Dopen()
+    {
         long dataset_id = HDF5Constants.H5I_INVALID_HID;
         _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
         try {
             H5.H5Dclose(H5did);
-            H5did = HDF5Constants.H5I_INVALID_HID;
+            H5did      = HDF5Constants.H5I_INVALID_HID;
             dataset_id = H5.H5Dopen(H5fid, "dset", HDF5Constants.H5P_DEFAULT);
         }
         catch (Exception err) {
@@ -339,7 +399,8 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dget_storage_size_empty() {
+    public void testH5Dget_storage_size_empty()
+    {
         long storage_size = 0;
         _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
@@ -354,10 +415,11 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dget_storage_size() {
+    public void testH5Dget_storage_size()
+    {
         long storage_size = 0;
         int[][] dset_data = new int[DIM_X][DIM_Y];
-        int FILLVAL = 99;
+        int FILLVAL       = 99;
         _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
         // Initialize the dataset.
@@ -367,9 +429,8 @@ public class TestH5D {
 
         try {
             if (H5did >= 0)
-                H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data[0]);
+                H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                            HDF5Constants.H5P_DEFAULT, dset_data[0]);
         }
         catch (Exception e) {
             e.printStackTrace();
@@ -382,21 +443,22 @@ public class TestH5D {
             err.printStackTrace();
             fail("testH5Dget_storage_size: " + err);
         }
-        assertTrue("testH5Dget_storage_size: "+storage_size, storage_size == DIM_X*DIM_Y*4);
+        assertTrue("testH5Dget_storage_size: " + storage_size, storage_size == DIM_X * DIM_Y * 4);
     }
 
     @Test
-    public void testH5Dget_access_plist() {
-        long dapl_id = HDF5Constants.H5I_INVALID_HID;
-        long test_dapl_id = HDF5Constants.H5I_INVALID_HID;
-        int[] mdc_nelmts1 = {0};
-        int[] mdc_nelmts2 = {0};
+    public void testH5Dget_access_plist()
+    {
+        long dapl_id        = HDF5Constants.H5I_INVALID_HID;
+        long test_dapl_id   = HDF5Constants.H5I_INVALID_HID;
+        int[] mdc_nelmts1   = {0};
+        int[] mdc_nelmts2   = {0};
         long[] rdcc_nelmts1 = {0};
         long[] rdcc_nelmts2 = {0};
         long[] rdcc_nbytes1 = {0};
         long[] rdcc_nbytes2 = {0};
-        double[] rdcc_w01 = {0};
-        double[] rdcc_w02 = {0};
+        double[] rdcc_w01   = {0};
+        double[] rdcc_w02   = {0};
 
         try {
             test_dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
@@ -442,14 +504,15 @@ public class TestH5D {
         catch (Exception err) {
             err.printStackTrace();
         }
-        assertTrue("testH5Dget_access_plist: ", rdcc_nelmts2==rdcc_nelmts2 && rdcc_nbytes2==rdcc_nbytes2);
+        assertTrue("testH5Dget_access_plist: ", rdcc_nelmts2 == rdcc_nelmts2 && rdcc_nbytes2 == rdcc_nbytes2);
     }
 
     @Test
-    public void testH5Dget_space_status() {
+    public void testH5Dget_space_status()
+    {
         int[][] write_dset_data = new int[DIM_X][DIM_Y];
-        int space_status = -1;
-        int space_status0 = -1;
+        int space_status        = -1;
+        int space_status0       = -1;
 
         // Initialize the dataset.
         for (int indx = 0; indx < DIM_X; indx++)
@@ -466,7 +529,8 @@ public class TestH5D {
         catch (Exception e) {
             e.printStackTrace();
         }
-        assertTrue("testH5Dget_space_status0 - H5.H5Dget_space_status: ", space_status0 == H5D_space_status.H5D_SPACE_STATUS_ALLOCATED.getCode());
+        assertTrue("testH5Dget_space_status0 - H5.H5Dget_space_status: ",
+                   space_status0 == H5D_space_status.H5D_SPACE_STATUS_ALLOCATED.getCode());
 
         // Retrieve and print space status and storage size for dset.
         try {
@@ -475,12 +539,12 @@ public class TestH5D {
         catch (Exception e) {
             e.printStackTrace();
         }
-        assertFalse("testH5Dget_space_status - H5.H5Dget_space_status: ", space_status == H5D_space_status.H5D_SPACE_STATUS_ALLOCATED.getCode());
+        assertFalse("testH5Dget_space_status - H5.H5Dget_space_status: ",
+                    space_status == H5D_space_status.H5D_SPACE_STATUS_ALLOCATED.getCode());
 
         // Write the data to the dataset.
         try {
-            H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+            H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
                         HDF5Constants.H5P_DEFAULT, write_dset_data);
         }
         catch (Exception e) {
@@ -494,16 +558,18 @@ public class TestH5D {
         catch (Exception e) {
             e.printStackTrace();
         }
-        assertTrue("testH5Dget_space_status - H5.H5Dget_space_status: ", space_status == H5D_space_status.H5D_SPACE_STATUS_ALLOCATED.getCode());
+        assertTrue("testH5Dget_space_status - H5.H5Dget_space_status: ",
+                   space_status == H5D_space_status.H5D_SPACE_STATUS_ALLOCATED.getCode());
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_space_closed() throws Throwable {
+    public void testH5Dget_space_closed() throws Throwable
+    {
         long dataset_id = HDF5Constants.H5I_INVALID_HID;
         try {
-            dataset_id = H5.H5Dcreate(H5fid, "dset",
-                        HDF5Constants.H5T_STD_I32BE, H5dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            dataset_id =
+                H5.H5Dcreate(H5fid, "dset", HDF5Constants.H5T_STD_I32BE, H5dsid, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -516,7 +582,8 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dget_space() {
+    public void testH5Dget_space()
+    {
         long dataspace_id = HDF5Constants.H5I_INVALID_HID;
         _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
@@ -540,12 +607,13 @@ public class TestH5D {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_type_closed() throws Throwable {
+    public void testH5Dget_type_closed() throws Throwable
+    {
         long dataset_id = HDF5Constants.H5I_INVALID_HID;
         try {
-            dataset_id = H5.H5Dcreate(H5fid, "dset",
-                        HDF5Constants.H5T_STD_I32BE, H5dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            dataset_id =
+                H5.H5Dcreate(H5fid, "dset", HDF5Constants.H5T_STD_I32BE, H5dsid, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -558,7 +626,8 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dget_type() {
+    public void testH5Dget_type()
+    {
         long datatype_id = HDF5Constants.H5I_INVALID_HID;
         _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
@@ -582,9 +651,10 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dget_offset() {
+    public void testH5Dget_offset()
+    {
         int[][] write_dset_data = new int[DIM_X][DIM_Y];
-        long dset_address = 0;
+        long dset_address       = 0;
         _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
         try {
@@ -600,8 +670,7 @@ public class TestH5D {
         }
         // Write the data to the dataset.
         try {
-            H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+            H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
                         HDF5Constants.H5P_DEFAULT, write_dset_data);
         }
         catch (Exception e) {
@@ -621,15 +690,16 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Dfill_null() {
-        int[] buf_data = new int[DIM_X*DIM_Y];
+    public void testH5Dfill_null()
+    {
+        int[] buf_data = new int[DIM_X * DIM_Y];
 
         // Initialize memory buffer
         for (int indx = 0; indx < DIM_X; indx++)
             for (int jndx = 0; jndx < DIM_Y; jndx++) {
                 buf_data[(indx * DIM_Y) + jndx] = indx * jndx - jndx;
             }
-        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X*DIM_Y, buf_data);
+        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X * DIM_Y, buf_data);
 
         // Fill selection in memory
         try {
@@ -644,12 +714,13 @@ public class TestH5D {
         // Verify memory buffer the hard way
         for (int indx = 0; indx < DIM_X; indx++)
             for (int jndx = 0; jndx < DIM_Y; jndx++)
-                assertTrue("H5.H5Dfill: [" + indx+","+jndx + "] ", buf_data[(indx * DIM_Y) + jndx] == 0);
+                assertTrue("H5.H5Dfill: [" + indx + "," + jndx + "] ", buf_data[(indx * DIM_Y) + jndx] == 0);
     }
 
     @Test
-    public void testH5Dfill() {
-        int[] buf_data = new int[DIM_X*DIM_Y];
+    public void testH5Dfill()
+    {
+        int[] buf_data    = new int[DIM_X * DIM_Y];
         byte[] fill_value = HDFNativeData.intToByte(254);
 
         // Initialize memory buffer
@@ -657,11 +728,12 @@ public class TestH5D {
             for (int jndx = 0; jndx < DIM_Y; jndx++) {
                 buf_data[(indx * DIM_Y) + jndx] = indx * jndx - jndx;
             }
-        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X*DIM_Y, buf_data);
+        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X * DIM_Y, buf_data);
 
         // Fill selection in memory
         try {
-            H5.H5Dfill(fill_value, HDF5Constants.H5T_NATIVE_UINT, buf_array, HDF5Constants.H5T_NATIVE_UINT, H5dsid);
+            H5.H5Dfill(fill_value, HDF5Constants.H5T_NATIVE_UINT, buf_array, HDF5Constants.H5T_NATIVE_UINT,
+                       H5dsid);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -672,46 +744,51 @@ public class TestH5D {
         // Verify memory buffer the hard way
         for (int indx = 0; indx < DIM_X; indx++)
             for (int jndx = 0; jndx < DIM_Y; jndx++)
-                assertTrue("H5.H5Dfill: [" + indx+","+jndx + "] ", buf_data[(indx * DIM_Y) + jndx] == 254);
+                assertTrue("H5.H5Dfill: [" + indx + "," + jndx + "] ",
+                           buf_data[(indx * DIM_Y) + jndx] == 254);
     }
 
     @Test
-    public void testH5Diterate() {
+    public void testH5Diterate()
+    {
         final int SPACE_RANK = 2;
         final int SPACE_FILL = 254;
 
         class H5D_iter_data implements H5D_iterate_t {
-            public int fill_value;             /* The fill value to check */
-            public long fill_curr_coord;          /* Current coordinate to examine */
-            public long[] fill_coords;            /* Pointer to selection's coordinates */
+            public int fill_value;       /* The fill value to check */
+            public long fill_curr_coord; /* Current coordinate to examine */
+            public long[] fill_coords;   /* Pointer to selection's coordinates */
         }
 
         H5D_iterate_t iter_data = new H5D_iter_data();
 
         class H5D_iter_callback implements H5D_iterate_cb {
-            public int callback(byte[] elem_buf, long elem_id, int ndim, long[] point, H5D_iterate_t op_data) {
-                //Check value in current buffer location
+            public int callback(byte[] elem_buf, long elem_id, int ndim, long[] point, H5D_iterate_t op_data)
+            {
+                // Check value in current buffer location
                 int element = HDFNativeData.byteToInt(elem_buf, 0);
-                if(element != ((H5D_iter_data)op_data).fill_value)
+                if (element != ((H5D_iter_data)op_data).fill_value)
                     return -1;
-                //Check number of dimensions
-                if(ndim != SPACE_RANK)
-                    return(-1);
-                //Check Coordinates
+                // Check number of dimensions
+                if (ndim != SPACE_RANK)
+                    return (-1);
+                // Check Coordinates
                 long[] fill_coords = new long[2];
-                fill_coords[0] = ((H5D_iter_data)op_data).fill_coords[(int) (2 * ((H5D_iter_data)op_data).fill_curr_coord)];
-                fill_coords[1] = ((H5D_iter_data)op_data).fill_coords[(int) (2 * ((H5D_iter_data)op_data).fill_curr_coord) + 1];
+                fill_coords[0] =
+                    ((H5D_iter_data)op_data).fill_coords[(int)(2 * ((H5D_iter_data)op_data).fill_curr_coord)];
+                fill_coords[1] = ((H5D_iter_data)op_data)
+                                     .fill_coords[(int)(2 * ((H5D_iter_data)op_data).fill_curr_coord) + 1];
                 ((H5D_iter_data)op_data).fill_curr_coord++;
-                if(fill_coords[0] != point[0])
-                    return(-1);
-                if(fill_coords[1] != point[1])
-                    return(-1);
+                if (fill_coords[0] != point[0])
+                    return (-1);
+                if (fill_coords[1] != point[1])
+                    return (-1);
 
-                return(0);
+                return (0);
             }
         }
 
-        int[] buf_data = new int[DIM_X*DIM_Y];
+        int[] buf_data    = new int[DIM_X * DIM_Y];
         byte[] fill_value = HDFNativeData.intToByte(SPACE_FILL);
 
         // Initialize memory buffer
@@ -719,11 +796,12 @@ public class TestH5D {
             for (int jndx = 0; jndx < DIM_Y; jndx++) {
                 buf_data[(indx * DIM_Y) + jndx] = indx * jndx - jndx;
             }
-        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X*DIM_Y, buf_data);
+        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X * DIM_Y, buf_data);
 
         // Fill selection in memory
         try {
-            H5.H5Dfill(fill_value, HDF5Constants.H5T_NATIVE_UINT, buf_array, HDF5Constants.H5T_NATIVE_UINT, H5dsid);
+            H5.H5Dfill(fill_value, HDF5Constants.H5T_NATIVE_UINT, buf_array, HDF5Constants.H5T_NATIVE_UINT,
+                       H5dsid);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -731,19 +809,20 @@ public class TestH5D {
         }
 
         // Initialize the iterator structure
-        ((H5D_iter_data)iter_data).fill_value = SPACE_FILL;
+        ((H5D_iter_data)iter_data).fill_value      = SPACE_FILL;
         ((H5D_iter_data)iter_data).fill_curr_coord = 0;
         // Set the coordinates of the selection
-        ((H5D_iter_data)iter_data).fill_coords = new long[DIM_X*DIM_Y*SPACE_RANK];   /* Coordinates of selection */
+        ((H5D_iter_data)iter_data).fill_coords =
+            new long[DIM_X * DIM_Y * SPACE_RANK]; /* Coordinates of selection */
         for (int indx = 0; indx < DIM_X; indx++)
             for (int jndx = 0; jndx < DIM_Y; jndx++) {
-                ((H5D_iter_data)iter_data).fill_coords[2*(indx * DIM_Y + jndx)] = indx;
-                ((H5D_iter_data)iter_data).fill_coords[2*(indx * DIM_Y + jndx) + 1] = jndx;
+                ((H5D_iter_data)iter_data).fill_coords[2 * (indx * DIM_Y + jndx)]     = indx;
+                ((H5D_iter_data)iter_data).fill_coords[2 * (indx * DIM_Y + jndx) + 1] = jndx;
             } /* end for */
 
         // Iterate through selection, verifying correct data
         H5D_iterate_cb iter_cb = new H5D_iter_callback();
-        int op_status = -1;
+        int op_status          = -1;
         try {
             op_status = H5.H5Diterate(buf_array, HDF5Constants.H5T_NATIVE_UINT, H5dsid, iter_cb, iter_data);
         }
@@ -755,47 +834,51 @@ public class TestH5D {
     }
 
     @Test
-    public void testH5Diterate_write() {
+    public void testH5Diterate_write()
+    {
         final int SPACE_RANK = 2;
         final int SPACE_FILL = 254;
 
         class H5D_iter_data implements H5D_iterate_t {
-            public int fill_value;             /* The fill value to check */
-            public long fill_curr_coord;          /* Current coordinate to examine */
-            public long[] fill_coords;            /* Pointer to selection's coordinates */
+            public int fill_value;       /* The fill value to check */
+            public long fill_curr_coord; /* Current coordinate to examine */
+            public long[] fill_coords;   /* Pointer to selection's coordinates */
         }
 
         H5D_iterate_t iter_data = new H5D_iter_data();
 
         class H5D_iter_callback implements H5D_iterate_cb {
-            public int callback(byte[] elem_buf, long elem_id, int ndim, long[] point, H5D_iterate_t op_data) {
-                //Check value in current buffer location
+            public int callback(byte[] elem_buf, long elem_id, int ndim, long[] point, H5D_iterate_t op_data)
+            {
+                // Check value in current buffer location
                 int element = HDFNativeData.byteToInt(elem_buf, 0);
-                if(element != ((H5D_iter_data)op_data).fill_value)
+                if (element != ((H5D_iter_data)op_data).fill_value)
                     return -1;
-                //Check number of dimensions
-                if(ndim != SPACE_RANK)
-                    return(-1);
-                //Check Coordinates
+                // Check number of dimensions
+                if (ndim != SPACE_RANK)
+                    return (-1);
+                // Check Coordinates
                 long[] fill_coords = new long[2];
-                fill_coords[0] = ((H5D_iter_data)op_data).fill_coords[(int) (2 * ((H5D_iter_data)op_data).fill_curr_coord)];
-                fill_coords[1] = ((H5D_iter_data)op_data).fill_coords[(int) (2 * ((H5D_iter_data)op_data).fill_curr_coord) + 1];
+                fill_coords[0] =
+                    ((H5D_iter_data)op_data).fill_coords[(int)(2 * ((H5D_iter_data)op_data).fill_curr_coord)];
+                fill_coords[1] = ((H5D_iter_data)op_data)
+                                     .fill_coords[(int)(2 * ((H5D_iter_data)op_data).fill_curr_coord) + 1];
                 ((H5D_iter_data)op_data).fill_curr_coord++;
-                if(fill_coords[0] != point[0])
-                    return(-1);
-                if(fill_coords[1] != point[1])
-                    return(-1);
+                if (fill_coords[0] != point[0])
+                    return (-1);
+                if (fill_coords[1] != point[1])
+                    return (-1);
                 element -= 128;
                 byte[] new_elembuf = HDFNativeData.intToByte(element);
-                elem_buf[0] = new_elembuf[0];
-                elem_buf[1] = new_elembuf[1];
-                elem_buf[2] = new_elembuf[2];
-                elem_buf[3] = new_elembuf[3];
-                return(0);
+                elem_buf[0]        = new_elembuf[0];
+                elem_buf[1]        = new_elembuf[1];
+                elem_buf[2]        = new_elembuf[2];
+                elem_buf[3]        = new_elembuf[3];
+                return (0);
             }
         }
 
-        int[] buf_data = new int[DIM_X*DIM_Y];
+        int[] buf_data    = new int[DIM_X * DIM_Y];
         byte[] fill_value = HDFNativeData.intToByte(SPACE_FILL);
 
         // Initialize memory buffer
@@ -803,11 +886,12 @@ public class TestH5D {
             for (int jndx = 0; jndx < DIM_Y; jndx++) {
                 buf_data[(indx * DIM_Y) + jndx] = indx * jndx - jndx;
             }
-        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X*DIM_Y, buf_data);
+        byte[] buf_array = HDFNativeData.intToByte(0, DIM_X * DIM_Y, buf_data);
 
         // Fill selection in memory
         try {
-            H5.H5Dfill(fill_value, HDF5Constants.H5T_NATIVE_UINT, buf_array, HDF5Constants.H5T_NATIVE_UINT, H5dsid);
+            H5.H5Dfill(fill_value, HDF5Constants.H5T_NATIVE_UINT, buf_array, HDF5Constants.H5T_NATIVE_UINT,
+                       H5dsid);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -815,19 +899,20 @@ public class TestH5D {
         }
 
         // Initialize the iterator structure
-        ((H5D_iter_data)iter_data).fill_value = SPACE_FILL;
+        ((H5D_iter_data)iter_data).fill_value      = SPACE_FILL;
         ((H5D_iter_data)iter_data).fill_curr_coord = 0;
         // Set the coordinates of the selection
-        ((H5D_iter_data)iter_data).fill_coords = new long[DIM_X*DIM_Y*SPACE_RANK];   /* Coordinates of selection */
+        ((H5D_iter_data)iter_data).fill_coords =
+            new long[DIM_X * DIM_Y * SPACE_RANK]; /* Coordinates of selection */
         for (int indx = 0; indx < DIM_X; indx++)
             for (int jndx = 0; jndx < DIM_Y; jndx++) {
-                ((H5D_iter_data)iter_data).fill_coords[2*(indx * DIM_Y + jndx)] = indx;
-                ((H5D_iter_data)iter_data).fill_coords[2*(indx * DIM_Y + jndx) + 1] = jndx;
+                ((H5D_iter_data)iter_data).fill_coords[2 * (indx * DIM_Y + jndx)]     = indx;
+                ((H5D_iter_data)iter_data).fill_coords[2 * (indx * DIM_Y + jndx) + 1] = jndx;
             } /* end for */
 
         // Iterate through selection, verifying correct data
         H5D_iterate_cb iter_cb = new H5D_iter_callback();
-        int op_status = -1;
+        int op_status          = -1;
         try {
             op_status = H5.H5Diterate(buf_array, HDF5Constants.H5T_NATIVE_UINT, H5dsid, iter_cb, iter_data);
         }
@@ -842,29 +927,27 @@ public class TestH5D {
         // Verify memory buffer the hard way
         for (int indx = 0; indx < DIM_X; indx++)
             for (int jndx = 0; jndx < DIM_Y; jndx++)
-                assertTrue("H5.H5Diterate: [" + indx+","+jndx + "] "+buf_data[(indx * DIM_Y) + jndx], buf_data[(indx * DIM_Y) + jndx] == 126);
+                assertTrue("H5.H5Diterate: [" + indx + "," + jndx + "] " + buf_data[(indx * DIM_Y) + jndx],
+                           buf_data[(indx * DIM_Y) + jndx] == 126);
     }
 
     @Test
-    public void testH5Dvlen_get_buf_size() {
-        String[] str_data = { "Parting", "is such", "sweet", "sorrow.",
-                "Testing", "one", "two", "three.",
-                "Dog,", "man's", "best", "friend.",
-                "Diamonds", "are", "a", "girls!",
-                "S A", "T U R", "D A Y", "night",
-                "That's", "all", "folks", "!!!" };
-        long vl_size = -1;  /* Number of bytes used */
+    public void testH5Dvlen_get_buf_size()
+    {
+        String[] str_data   = {"Parting", "is such", "sweet", "sorrow.", "Testing",  "one", "two",   "three.",
+                             "Dog,",    "man's",   "best",  "friend.", "Diamonds", "are", "a",     "girls!",
+                             "S A",     "T U R",   "D A Y", "night",   "That's",   "all", "folks", "!!!"};
+        long vl_size        = -1; /* Number of bytes used */
         long str_data_bytes = 0;
         for (int idx = 0; idx < str_data.length; idx++)
-            str_data_bytes += str_data[idx].length() + 1;  //Account for terminating null
+            str_data_bytes += str_data[idx].length() + 1; // Account for terminating null
 
         _createVLDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
         try {
             if ((H5did >= 0) && (H5dtid >= 0))
-                H5.H5Dwrite_VLStrings(H5did, H5dtid,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, str_data);
+                H5.H5Dwrite_VLStrings(H5did, H5dtid, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                                      HDF5Constants.H5P_DEFAULT, str_data);
         }
         catch (Exception e) {
             e.printStackTrace();
@@ -879,63 +962,55 @@ public class TestH5D {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Dvlen_read_invalid_buffer() throws Throwable {
-        String[] str_data = { "Parting", "is such", "sweet", "sorrow.",
-                "Testing", "one", "two", "three.",
-                "Dog,", "man's", "best", "friend.",
-                "Diamonds", "are", "a", "girls!",
-                "S A", "T U R", "D A Y", "night",
-                "That's", "all", "folks", "!!!" };
-        byte[] read_data = new byte[512];
+    public void testH5Dvlen_read_invalid_buffer() throws Throwable
+    {
+        String[] str_data = {"Parting", "is such", "sweet", "sorrow.", "Testing",  "one", "two",   "three.",
+                             "Dog,",    "man's",   "best",  "friend.", "Diamonds", "are", "a",     "girls!",
+                             "S A",     "T U R",   "D A Y", "night",   "That's",   "all", "folks", "!!!"};
+        byte[] read_data  = new byte[512];
 
         _createVLDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
         try {
-            H5.H5Dwrite_VLStrings(H5did, H5dtid,
-                    HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    HDF5Constants.H5P_DEFAULT, str_data);
+            H5.H5Dwrite_VLStrings(H5did, H5dtid, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                                  HDF5Constants.H5P_DEFAULT, str_data);
         }
         catch (Exception e) {
             e.printStackTrace();
         }
 
-        H5.H5Dread(H5did, H5dtid,
-                     HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                     HDF5Constants.H5P_DEFAULT, read_data);
+        H5.H5Dread(H5did, H5dtid, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT,
+                   read_data);
     }
 
     @Test
-    public void testH5Dvlen_write_read() {
-        String[] str_wdata = { "Parting", "is such", "sweet", "sorrow.",
-                "Testing", "one", "two", "three.",
-                "Dog,", "man's", "best", "friend.",
-                "Diamonds", "are", "a", "girls!",
-                "S A", "T U R", "D A Y", "night",
-                "That's", "all", "folks", "!!!" };
+    public void testH5Dvlen_write_read()
+    {
+        String[] str_wdata = {"Parting", "is such", "sweet", "sorrow.", "Testing",  "one", "two",   "three.",
+                              "Dog,",    "man's",   "best",  "friend.", "Diamonds", "are", "a",     "girls!",
+                              "S A",     "T U R",   "D A Y", "night",   "That's",   "all", "folks", "!!!"};
         String[] str_rdata = new String[DIM_X * DIM_Y];
 
         _createVLDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
         try {
             if ((H5did >= 0) && (H5dtid >= 0))
-                H5.H5Dwrite_VLStrings(H5did, H5dtid,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, str_wdata);
+                H5.H5Dwrite_VLStrings(H5did, H5dtid, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                                      HDF5Constants.H5P_DEFAULT, str_wdata);
         }
         catch (Exception e) {
             e.printStackTrace();
         }
         try {
             if ((H5did >= 0) && (H5dtid >= 0))
-                H5.H5Dread_VLStrings(H5did, H5dtid,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, str_rdata);
+                H5.H5Dread_VLStrings(H5did, H5dtid, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                                     HDF5Constants.H5P_DEFAULT, str_rdata);
         }
         catch (Exception e) {
             e.printStackTrace();
         }
         for (int v = 0; v < DIM_X * DIM_Y; v++)
-            assertTrue("testH5Dvlen_write_read " + str_wdata[v] + " == " + str_rdata[v], str_wdata[v] == str_wdata[v]);
+            assertTrue("testH5Dvlen_write_read " + str_wdata[v] + " == " + str_rdata[v],
+                       str_wdata[v] == str_wdata[v]);
     }
-
 }
diff --git a/java/test/TestH5Dparams.java b/java/test/TestH5Dparams.java
index 3661139..e42e10b 100644
--- a/java/test/TestH5Dparams.java
+++ b/java/test/TestH5Dparams.java
@@ -13,6 +13,7 @@
 package test;
 
 import static org.junit.Assert.assertTrue;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
@@ -23,108 +24,128 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Dparams {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
-    @Test//(expected = HDF5LibraryException.class)
-    public void testH5Dclose_invalid() throws Throwable {
+    @Test //(expected = HDF5LibraryException.class)
+    public void testH5Dclose_invalid() throws Throwable
+    {
         long did = H5.H5Dclose(-1);
         assertTrue(did == 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Dcreate_null() throws Throwable {
+    public void testH5Dcreate_null() throws Throwable
+    {
         H5.H5Dcreate(-1, null, 0, 0, 0, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dcreate_invalid() throws Throwable {
+    public void testH5Dcreate_invalid() throws Throwable
+    {
         H5.H5Dcreate(-1, "Bogus", -1, -1, -1, -1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dcreate_anon_invalid() throws Throwable {
+    public void testH5Dcreate_anon_invalid() throws Throwable
+    {
         H5.H5Dcreate_anon(-1, -1, -1, -1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_access_plist_invalid() throws Throwable {
+    public void testH5Dget_access_plist_invalid() throws Throwable
+    {
         H5.H5Dget_access_plist(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_create_plist_invalid() throws Throwable {
+    public void testH5Dget_create_plist_invalid() throws Throwable
+    {
         H5.H5Dget_create_plist(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_offset_invalid() throws Throwable {
+    public void testH5Dget_offset_invalid() throws Throwable
+    {
         H5.H5Dget_offset(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_space_invalid() throws Throwable {
+    public void testH5Dget_space_invalid() throws Throwable
+    {
         H5.H5Dget_space(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_type_invalid() throws Throwable {
+    public void testH5Dget_type_invalid() throws Throwable
+    {
         H5.H5Dget_type(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dget_space_status_invalid() throws Throwable {
+    public void testH5Dget_space_status_invalid() throws Throwable
+    {
         int status = H5.H5Dget_space_status(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dset_extent_status_invalid() throws Throwable {
+    public void testH5Dset_extent_status_invalid() throws Throwable
+    {
         long[] size = new long[2];
         H5.H5Dset_extent(-1, size);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Dset_extent_status_null() throws Throwable {
+    public void testH5Dset_extent_status_null() throws Throwable
+    {
         H5.H5Dset_extent(-1, null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Dopen_null() throws Throwable {
+    public void testH5Dopen_null() throws Throwable
+    {
         H5.H5Dopen(-1, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dopen_invalid() throws Throwable {
+    public void testH5Dopen_invalid() throws Throwable
+    {
         H5.H5Dopen(-1, "Bogus", 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dvlen_get_buf_size_invalid() throws Throwable {
+    public void testH5Dvlen_get_buf_size_invalid() throws Throwable
+    {
         H5.H5Dvlen_get_buf_size(-1, -1, -1);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Dget_storage_size_invalid() throws Throwable {
+    public void testH5Dget_storage_size_invalid() throws Throwable
+    {
         H5.H5Dget_storage_size(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Dflush_invalid() throws Throwable {
+    public void testH5Dflush_invalid() throws Throwable
+    {
         H5.H5Dflush(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Drefresh_invalid() throws Throwable {
+    public void testH5Drefresh_invalid() throws Throwable
+    {
         H5.H5Drefresh(-1);
     }
-
 }
diff --git a/java/test/TestH5Dplist.java b/java/test/TestH5Dplist.java
index 774b9dd..b9e97f4 100644
--- a/java/test/TestH5Dplist.java
+++ b/java/test/TestH5Dplist.java
@@ -30,35 +30,42 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Dplist {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testDp.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 7;
-    private static final int EDIM_X = 6;
-    private static final int EDIM_Y = 10;
-    private static final int CHUNK_X = 4;
-    private static final int CHUNK_Y = 4;
-    private static final int NDIMS = 2;
-    private static final int FILLVAL = 99;
-    private static final int RANK = 2;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long H5dcpl_id = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-    long[] H5extdims = { EDIM_X, EDIM_Y };
-    long[] H5chunk_dims = { CHUNK_X, CHUNK_Y };
-    long[] H5maxdims = { HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED };
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X      = 4;
+    private static final int DIM_Y      = 7;
+    private static final int EDIM_X     = 6;
+    private static final int EDIM_Y     = 10;
+    private static final int CHUNK_X    = 4;
+    private static final int CHUNK_Y    = 4;
+    private static final int NDIMS      = 2;
+    private static final int FILLVAL    = 99;
+    private static final int RANK       = 2;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5did                          = HDF5Constants.H5I_INVALID_HID;
+    long H5dcpl_id                      = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                       = {DIM_X, DIM_Y};
+    long[] H5extdims                    = {EDIM_X, EDIM_Y};
+    long[] H5chunk_dims                 = {CHUNK_X, CHUNK_Y};
+    long[] H5maxdims                    = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED};
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final void _createPDataset(long fid, long dsid, String name, long dcpl_val) {
+    private final void _createPDataset(long fid, long dsid, String name, long dcpl_val)
+    {
         try {
             H5dcpl_id = H5.H5Pcreate(dcpl_val);
         }
@@ -78,7 +85,7 @@ public class TestH5Dplist {
 
         // Set the fill value for the dataset
         try {
-            int[] fill_value = { FILLVAL };
+            int[] fill_value = {FILLVAL};
             H5.H5Pset_fill_value(H5dcpl_id, HDF5Constants.H5T_NATIVE_INT, fill_value);
         }
         catch (Exception e) {
@@ -98,136 +105,151 @@ public class TestH5Dplist {
         _createDataset(H5fid, H5dsid, "dset", H5dcpl_id, HDF5Constants.H5P_DEFAULT);
     }
 
-    private final void _createDataset(long fid, long dsid, String name, long dcpl, long dapl) {
+    private final void _createDataset(long fid, long dsid, String name, long dcpl, long dapl)
+    {
         try {
-            H5did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, dcpl, dapl);
+            H5did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                                 dcpl, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Dcreate: " + err);
         }
-        assertTrue("TestH5Dplist._createDataset: ",H5did > 0);
+        assertTrue("TestH5Dplist._createDataset: ", H5did > 0);
     }
 
     @Before
-    public void createH5file() throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
             H5dsid = H5.H5Screate_simple(RANK, H5dims, H5maxdims);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5Dplist.createH5file: " + err);
         }
-        assertTrue("TestH5Dplist.createH5file: H5.H5Fcreate: ",H5fid > 0);
-        assertTrue("TestH5Dplist.createH5file: H5.H5Screate_simple: ",H5dsid > 0);
+        assertTrue("TestH5Dplist.createH5file: H5.H5Fcreate: ", H5fid > 0);
+        assertTrue("TestH5Dplist.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5dcpl_id >= 0)
-            try {H5.H5Pclose(H5dcpl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5dcpl_id);
+            }
+            catch (Exception ex) {
+            }
         if (H5did > 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
-  @Test
-  public void testH5Dset_extent() {
-      int[][] write_dset_data = new int[DIM_X][DIM_Y];
-      int[][] read_dset_data = new int[DIM_X][DIM_Y];
-      int[][] extend_dset_data = new int[EDIM_X][EDIM_Y];
-
-      // Initialize the dataset.
-      for (int indx = 0; indx < DIM_X; indx++)
-          for (int jndx = 0; jndx < DIM_Y; jndx++)
-              write_dset_data[indx][jndx] = indx * jndx - jndx;
-
-      _createPDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DATASET_CREATE);
-
-      // Read values from the dataset, which has not been written to yet.
-      try {
-          H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT,
-                      HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                      HDF5Constants.H5P_DEFAULT, read_dset_data);
-      }
-      catch (Exception e) {
-          e.printStackTrace();
-      }
-      assertTrue("testH5Dset_extent - H5.H5Dread: ", read_dset_data[0][0] == 99);
-
-      // Write the data to the dataset.
-      try {
-          H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
-                      HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                      HDF5Constants.H5P_DEFAULT, write_dset_data);
-      }
-      catch (Exception e) {
-          e.printStackTrace();
-      }
-
-      // Read the data back.
-      try {
-          H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT,
-                  HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                  HDF5Constants.H5P_DEFAULT, read_dset_data);
-      }
-      catch (Exception e) {
-          e.printStackTrace();
-      }
-      assertTrue("testH5Dset_extent - H5.H5Dread: ", read_dset_data[3][6] == 12);
-
-      // Extend the dataset.
-      try {
-          H5.H5Dset_extent(H5did, H5extdims);
-      }
-      catch (Exception e) {
-          e.printStackTrace();
-      }
-
-      // Read from the extended dataset.
-      try {
-          H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT,
-                  HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                  HDF5Constants.H5P_DEFAULT, extend_dset_data);
-      }
-      catch (Exception e) {
-          e.printStackTrace();
-      }
-      assertTrue("testH5Dset_extent - H5.H5Dread: ", extend_dset_data[3][6] == 12);
-      assertTrue("testH5Dset_extent - H5.H5Dread: ", extend_dset_data[4][8] == 99);
-  }
-
-  @Test
-  public void testH5P_dset_no_attrs_hint() {
-      boolean ret_val_id = true;
-
-      _createPDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DATASET_CREATE);
-
-      try {
-          ret_val_id = H5.H5Pget_dset_no_attrs_hint(H5dcpl_id);
-          assertFalse("H5P_dset_no_attrs_hint", ret_val_id);
-          H5.H5Pset_dset_no_attrs_hint(H5dcpl_id, true);
-          ret_val_id = H5.H5Pget_dset_no_attrs_hint(H5dcpl_id);
-          assertTrue("H5P_dset_no_attrs_hint", ret_val_id);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("H5P_dset_no_attrs_hint: " + err);
-      }
-  }
+    @Test
+    public void testH5Dset_extent()
+    {
+        int[][] write_dset_data  = new int[DIM_X][DIM_Y];
+        int[][] read_dset_data   = new int[DIM_X][DIM_Y];
+        int[][] extend_dset_data = new int[EDIM_X][EDIM_Y];
 
+        // Initialize the dataset.
+        for (int indx = 0; indx < DIM_X; indx++)
+            for (int jndx = 0; jndx < DIM_Y; jndx++)
+                write_dset_data[indx][jndx] = indx * jndx - jndx;
+
+        _createPDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DATASET_CREATE);
+
+        // Read values from the dataset, which has not been written to yet.
+        try {
+            H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, read_dset_data);
+        }
+        catch (Exception e) {
+            e.printStackTrace();
+        }
+        assertTrue("testH5Dset_extent - H5.H5Dread: ", read_dset_data[0][0] == 99);
+
+        // Write the data to the dataset.
+        try {
+            H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                        HDF5Constants.H5P_DEFAULT, write_dset_data);
+        }
+        catch (Exception e) {
+            e.printStackTrace();
+        }
+
+        // Read the data back.
+        try {
+            H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, read_dset_data);
+        }
+        catch (Exception e) {
+            e.printStackTrace();
+        }
+        assertTrue("testH5Dset_extent - H5.H5Dread: ", read_dset_data[3][6] == 12);
+
+        // Extend the dataset.
+        try {
+            H5.H5Dset_extent(H5did, H5extdims);
+        }
+        catch (Exception e) {
+            e.printStackTrace();
+        }
+
+        // Read from the extended dataset.
+        try {
+            H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, extend_dset_data);
+        }
+        catch (Exception e) {
+            e.printStackTrace();
+        }
+        assertTrue("testH5Dset_extent - H5.H5Dread: ", extend_dset_data[3][6] == 12);
+        assertTrue("testH5Dset_extent - H5.H5Dread: ", extend_dset_data[4][8] == 99);
+    }
+
+    @Test
+    public void testH5P_dset_no_attrs_hint()
+    {
+        boolean ret_val_id = true;
+
+        _createPDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DATASET_CREATE);
+
+        try {
+            ret_val_id = H5.H5Pget_dset_no_attrs_hint(H5dcpl_id);
+            assertFalse("H5P_dset_no_attrs_hint", ret_val_id);
+            H5.H5Pset_dset_no_attrs_hint(H5dcpl_id, true);
+            ret_val_id = H5.H5Pget_dset_no_attrs_hint(H5dcpl_id);
+            assertTrue("H5P_dset_no_attrs_hint", ret_val_id);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("H5P_dset_no_attrs_hint: " + err);
+        }
+    }
 }
diff --git a/java/test/TestH5Drw.java b/java/test/TestH5Drw.java
index 69fb9d7..b18bed7 100644
--- a/java/test/TestH5Drw.java
+++ b/java/test/TestH5Drw.java
@@ -33,77 +33,97 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Drw {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname                 = new TestName();
     private static final String H5_INTS_FILE = "tintsattrs.h5";
     private static final String H5_FLTS_FILE = "tfloatsattrs.h5";
-    private static final int DIM_X = 8;
-    private static final int DIM8_Y = 8;
-    private static final int DIM16_Y = 16;
-    private static final int DIM32_Y = 32;
-    private static final int DIM64_Y = 64;
-    private static final int DIM128_Y = 128;
-    private static final String DATASETU08 = "DU08BITS";
-    private static final String DATASETS08 = "DS08BITS";
-    private static final String DATASETU16 = "DU16BITS";
-    private static final String DATASETS16 = "DS16BITS";
-    private static final String DATASETU32 = "DU32BITS";
-    private static final String DATASETS32 = "DS32BITS";
-    private static final String DATASETU64 = "DU64BITS";
-    private static final String DATASETS64 = "DS64BITS";
-    private static final String DATASETF32 = "DS32BITS";
-    private static final String DATASETF64 = "DS64BITS";
-    private static final String DATASETF128 = "DS128BITS";
-    private static final int RANK = 2;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-
-    private final void _closeH5file() throws HDF5LibraryException {
+    private static final int DIM_X           = 8;
+    private static final int DIM8_Y          = 8;
+    private static final int DIM16_Y         = 16;
+    private static final int DIM32_Y         = 32;
+    private static final int DIM64_Y         = 64;
+    private static final int DIM128_Y        = 128;
+    private static final String DATASETU08   = "DU08BITS";
+    private static final String DATASETS08   = "DS08BITS";
+    private static final String DATASETU16   = "DU16BITS";
+    private static final String DATASETS16   = "DS16BITS";
+    private static final String DATASETU32   = "DU32BITS";
+    private static final String DATASETS32   = "DS32BITS";
+    private static final String DATASETU64   = "DU64BITS";
+    private static final String DATASETS64   = "DS64BITS";
+    private static final String DATASETF32   = "DS32BITS";
+    private static final String DATASETF64   = "DS64BITS";
+    private static final String DATASETF128  = "DS128BITS";
+    private static final int RANK            = 2;
+    long H5fid                               = HDF5Constants.H5I_INVALID_HID;
+    long H5did                               = HDF5Constants.H5I_INVALID_HID;
+
+    private final void _closeH5file() throws HDF5LibraryException
+    {
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
     }
 
-    public void openH5file(String filename, String dsetname) {
-       try {
-           H5fid = H5.H5Fopen(filename,
-                   HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5Drw._openH5file: " + err);
-       }
-       assertTrue("TestH5Drw._openH5file: H5.H5Fopen: ", H5fid >= 0);
-       try {
-           H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5Drw._openH5file: " + err);
-       }
-       assertTrue("TestH5Drw._openH5file: H5.H5Dopen: ", H5did >= 0);
+    public void openH5file(String filename, String dsetname)
+    {
+        try {
+            H5fid = H5.H5Fopen(filename, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5Drw._openH5file: " + err);
+        }
+        assertTrue("TestH5Drw._openH5file: H5.H5Fopen: ", H5fid >= 0);
+        try {
+            H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5Drw._openH5file: " + err);
+        }
+        assertTrue("TestH5Drw._openH5file: H5.H5Dopen: ", H5did >= 0);
     }
 
     @After
-    public void closeH5file() throws HDF5LibraryException {
+    public void closeH5file() throws HDF5LibraryException
+    {
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         H5fid = HDF5Constants.H5I_INVALID_HID;
         H5did = HDF5Constants.H5I_INVALID_HID;
         System.out.println();
     }
 
     @Before
-    public void verifyCount()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+    public void verifyCount() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
 
     @Test
-    public void testH5Dread_8bit_ints() {
+    public void testH5Dread_8bit_ints()
+    {
         byte[][] dset_data = new byte[DIM_X][DIM8_Y];
 
         try {
@@ -117,7 +137,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_UINT8, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -144,7 +164,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT8, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -153,7 +173,8 @@ public class TestH5Drw {
     }
 
     @Test
-    public void testH5Dread_16bit_ints() {
+    public void testH5Dread_16bit_ints()
+    {
         short[][] dset_data = new short[DIM_X][DIM16_Y];
 
         try {
@@ -167,7 +188,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_UINT16, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -194,7 +215,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT16, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -203,7 +224,8 @@ public class TestH5Drw {
     }
 
     @Test
-    public void testH5Dread_32bit_ints() {
+    public void testH5Dread_32bit_ints()
+    {
         int[][] dset_data = new int[DIM_X][DIM16_Y];
 
         try {
@@ -217,7 +239,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_UINT32, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -244,7 +266,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT32, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -253,7 +275,8 @@ public class TestH5Drw {
     }
 
     @Test
-    public void testH5Dread_64bit_ints() {
+    public void testH5Dread_64bit_ints()
+    {
         long[][] dset_data = new long[DIM_X][DIM64_Y];
 
         try {
@@ -267,7 +290,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_UINT64, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -294,7 +317,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_INT64, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -303,7 +326,8 @@ public class TestH5Drw {
     }
 
     @Test
-    public void testH5Dread_32bit_floats() {
+    public void testH5Dread_32bit_floats()
+    {
         float[][] dset_data = new float[DIM_X][DIM32_Y];
 
         try {
@@ -317,7 +341,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_FLOAT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -328,7 +352,8 @@ public class TestH5Drw {
     }
 
     @Test
-    public void testH5Dread_64bit_floats() {
+    public void testH5Dread_64bit_floats()
+    {
         double[][] dset_data = new double[DIM_X][DIM64_Y];
 
         try {
@@ -342,7 +367,7 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -353,7 +378,8 @@ public class TestH5Drw {
     }
 
     @Test
-    public void testH5Dread_128bit_floats() {
+    public void testH5Dread_128bit_floats()
+    {
         byte[][][] dset_data = new byte[DIM_X][DIM128_Y][8];
 
         try {
@@ -367,12 +393,11 @@ public class TestH5Drw {
         // Read data.
         try {
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_LDOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                       HDF5Constants.H5P_DEFAULT, dset_data);
         }
         catch (Exception err) {
             err.printStackTrace();
             fail("testH5Dread_128bit_floats: H5Dread: " + err);
         }
     }
-
 }
diff --git a/java/test/TestH5E.java b/java/test/TestH5E.java
index cad0a06..bdd6802 100644
--- a/java/test/TestH5E.java
+++ b/java/test/TestH5E.java
@@ -22,9 +22,9 @@ import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
-import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.callbacks.H5E_walk_cb;
 import hdf.hdf5lib.callbacks.H5E_walk_t;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.structs.H5E_error2_t;
 
 import org.junit.After;
@@ -35,20 +35,22 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5E {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     long hdf_java_classid = -1;
-    long current_stackid = -1;
+    long current_stackid  = -1;
 
     @Before
-    public void H5Eget_stack_class() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void H5Eget_stack_class()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         hdf_java_classid = -1;
         try {
             hdf_java_classid = H5.H5Eregister_class("HDF-Java-Error", "hdf-java", "2.5");
-            current_stackid = H5.H5Eget_current_stack();
+            current_stackid  = H5.H5Eget_current_stack();
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -57,7 +59,8 @@ public class TestH5E {
     }
 
     @After
-    public void H5Erestore_stack_class() {
+    public void H5Erestore_stack_class()
+    {
         try {
             H5.H5Eunregister_class(hdf_java_classid);
             hdf_java_classid = -1;
@@ -72,14 +75,15 @@ public class TestH5E {
     }
 
     @Test
-    public void testH5Eget_msg_major() {
+    public void testH5Eget_msg_major()
+    {
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (HDF5LibraryException hdferr) {
-            long errnum = hdferr.getMajorErrorNumber();
-            int[] error_msg_type = { HDF5Constants.H5E_MAJOR };
-            String msg = null;
+            long errnum          = hdferr.getMajorErrorNumber();
+            int[] error_msg_type = {HDF5Constants.H5E_MAJOR};
+            String msg           = null;
 
             try {
                 msg = H5.H5Eget_msg(errnum, error_msg_type);
@@ -92,11 +96,11 @@ public class TestH5E {
             assertEquals("H5.H5Eget_msg: ", HDF5Constants.H5E_MAJOR, error_msg_type[0]);
 
             /*
-            * If HDF5_VOL_CONNECTOR is set, this might not be the
-            * native connector and the error string might be different.
-            * Only check for the specific error message if the native
-            * connector is being used.
-            */
+             * If HDF5_VOL_CONNECTOR is set, this might not be the
+             * native connector and the error string might be different.
+             * Only check for the specific error message if the native
+             * connector is being used.
+             */
             String connector = System.getenv("HDF5_VOL_CONNECTOR");
             if (connector == null)
                 assertTrue("H5.H5Eget_msg: ", msg.contains("File accessibility"));
@@ -108,14 +112,15 @@ public class TestH5E {
     }
 
     @Test
-    public void testH5Eget_msg_minor() {
+    public void testH5Eget_msg_minor()
+    {
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (HDF5LibraryException hdferr) {
-            long errnum = hdferr.getMinorErrorNumber();
-            int[] error_msg_type = { HDF5Constants.H5E_MINOR };
-            String msg = null;
+            long errnum          = hdferr.getMinorErrorNumber();
+            int[] error_msg_type = {HDF5Constants.H5E_MINOR};
+            String msg           = null;
 
             try {
                 msg = H5.H5Eget_msg(errnum, error_msg_type);
@@ -128,11 +133,11 @@ public class TestH5E {
             assertEquals("H5.H5Eget_msg: ", HDF5Constants.H5E_MINOR, error_msg_type[0]);
 
             /*
-            * If HDF5_VOL_CONNECTOR is set, this might not be the
-            * native connector and the error string might be different.
-            * Only check for the specific error message if the native
-            * connector is being used.
-            */
+             * If HDF5_VOL_CONNECTOR is set, this might not be the
+             * native connector and the error string might be different.
+             * Only check for the specific error message if the native
+             * connector is being used.
+             */
             String connector = System.getenv("HDF5_VOL_CONNECTOR");
             if (connector == null)
                 assertTrue("H5.H5Eget_msg: ", msg.contains("Unable to open file"));
@@ -144,9 +149,10 @@ public class TestH5E {
     }
 
     @Test
-    public void testH5Epop() {
+    public void testH5Epop()
+    {
 
-        long num_msg = -1;
+        long num_msg       = -1;
         long saved_num_msg = -1;
 
         try {
@@ -213,13 +219,14 @@ public class TestH5E {
     }
 
     @Test
-    public void testH5Epush() {
-        String      err_func = "testH5Epush";
-        String      err_msg = "Error message";
-        long        estack_id = -1;
-        long        maj_err_id = -1;
-        long        min_err_id = -1;
-        long        num_msg = -1;
+    public void testH5Epush()
+    {
+        String err_func = "testH5Epush";
+        String err_msg  = "Error message";
+        long estack_id  = -1;
+        long maj_err_id = -1;
+        long min_err_id = -1;
+        long num_msg    = -1;
 
         try {
             try {
@@ -231,7 +238,8 @@ public class TestH5E {
                 fail("testH5Epush: H5.H5Ecreate_msg_major: " + err);
             }
             try {
-                min_err_id = H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MINOR, "Error in Test Function");
+                min_err_id =
+                    H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MINOR, "Error in Test Function");
                 assertFalse("H5.H5Ecreate_msg_minor: " + min_err_id, min_err_id < 0);
             }
             catch (Throwable err) {
@@ -257,7 +265,8 @@ public class TestH5E {
                 fail("testH5Epush: H5.H5Eget_num: " + err);
             }
 
-            H5.H5Epush(estack_id, "TestH5E.java", err_func, 354, hdf_java_classid, maj_err_id, min_err_id, err_msg);
+            H5.H5Epush(estack_id, "TestH5E.java", err_func, 354, hdf_java_classid, maj_err_id, min_err_id,
+                       err_msg);
 
             try {
                 num_msg = H5.H5Eget_num(estack_id);
@@ -274,24 +283,38 @@ public class TestH5E {
         }
         finally {
             if (estack_id >= 0)
-                try {H5.H5Eclose_stack(estack_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Eclose_stack(estack_id);
+                }
+                catch (Exception ex) {
+                }
             if (maj_err_id >= 0)
-                try {H5.H5Eclose_msg(maj_err_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Eclose_msg(maj_err_id);
+                }
+                catch (Exception ex) {
+                }
             if (min_err_id >= 0)
-                try {H5.H5Eclose_msg(min_err_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Eclose_msg(min_err_id);
+                }
+                catch (Exception ex) {
+                }
         }
     } /* end test_create() */
 
     @Test
-    public void testH5Ewalk() {
+    public void testH5Ewalk()
+    {
         class wdata {
-            public String err_desc = null;
+            public String err_desc  = null;
             public String func_name = null;
-            public int line = -1;
-            wdata(String desc, String func, int lineno) {
-                this.err_desc = new String(desc);
+            public int line         = -1;
+            wdata(String desc, String func, int lineno)
+            {
+                this.err_desc  = new String(desc);
                 this.func_name = new String(func);
-                this.line = lineno;
+                this.line      = lineno;
             }
         }
         class H5E_walk_data implements H5E_walk_t {
@@ -299,14 +322,15 @@ public class TestH5E {
         }
         H5E_walk_t walk_data = new H5E_walk_data();
         class H5E_walk_callback implements H5E_walk_cb {
-            public int callback(int nidx, H5E_error2_t info, H5E_walk_t op_data) {
+            public int callback(int nidx, H5E_error2_t info, H5E_walk_t op_data)
+            {
                 wdata wd = new wdata(info.desc, info.func_name, info.line);
                 ((H5E_walk_data)op_data).walkdata.add(wd);
                 return 0;
             }
         }
         H5E_walk_cb walk_cb = new H5E_walk_callback();
-        long num_msg = -1;
+        long num_msg        = -1;
 
         try {
             H5.H5Eset_current_stack(current_stackid);
@@ -346,9 +370,8 @@ public class TestH5E {
             err.printStackTrace();
             fail("testH5Ewalk:H5Ewalk2 " + err);
         }
-        assertFalse("testH5Ewalk:H5Ewalk2 ",((H5E_walk_data)walk_data).walkdata.isEmpty());
-        assertTrue("testH5Ewalk:H5Ewalk2 "+((H5E_walk_data)walk_data).walkdata.size(),((H5E_walk_data)walk_data).walkdata.size() > 0);
+        assertFalse("testH5Ewalk:H5Ewalk2 ", ((H5E_walk_data)walk_data).walkdata.isEmpty());
+        assertTrue("testH5Ewalk:H5Ewalk2 " + ((H5E_walk_data)walk_data).walkdata.size(),
+                   ((H5E_walk_data)walk_data).walkdata.size() > 0);
     }
-
 }
-
diff --git a/java/test/TestH5Edefault.java b/java/test/TestH5Edefault.java
index 9e93cea..c412cf2 100644
--- a/java/test/TestH5Edefault.java
+++ b/java/test/TestH5Edefault.java
@@ -15,25 +15,28 @@ package test;
 import static org.junit.Assert.assertFalse;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
 import org.junit.After;
 import org.junit.Before;
+import org.junit.Ignore;
 import org.junit.Rule;
 import org.junit.Test;
-import org.junit.Ignore;
 import org.junit.rules.TestName;
 
 public class TestH5Edefault {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     public static final int ERRSTACK_CNT = 6;
 
     @Before
-    public void H5Eset_default_stack() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void H5Eset_default_stack()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
@@ -46,23 +49,26 @@ public class TestH5Edefault {
         }
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eprint2_invalid_classid() throws Throwable {
+    public void testH5Eprint2_invalid_classid() throws Throwable
+    {
         H5.H5Eprint2(-1, null);
     }
 
     @Ignore
-    public void testH5Eprint() {
+    public void testH5Eprint()
+    {
         /*
-        * If HDF5_VOL_CONNECTOR is set, this might not be the
-        * native connector and the error stack might be different.
-        * Only check for the specific error stack if the native
-        * connector is being used.
-        */
+         * If HDF5_VOL_CONNECTOR is set, this might not be the
+         * native connector and the error stack might be different.
+         * Only check for the specific error stack if the native
+         * connector is being used.
+         */
         String connector = System.getenv("HDF5_VOL_CONNECTOR");
         if (connector == null) {
             try {
@@ -81,19 +87,20 @@ public class TestH5Edefault {
     }
 
     @Test
-    public void testH5Eget_current_stack() {
-        long num_msg = -1;
-        long num_msg_default = -1;
-        long saved_num_msg = -1;
-        long stack_id = -1;
+    public void testH5Eget_current_stack()
+    {
+        long num_msg          = -1;
+        long num_msg_default  = -1;
+        long saved_num_msg    = -1;
+        long stack_id         = -1;
         long stack_id_default = HDF5Constants.H5E_DEFAULT;
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            //default stack id will be different after exception
+            // default stack id will be different after exception
             stack_id_default = HDF5Constants.H5E_DEFAULT;
-            //err.printStackTrace(); //This will clear the error stack
+            // err.printStackTrace(); //This will clear the error stack
         }
         // Verify we have messages on the error stack
         try {
@@ -147,16 +154,17 @@ public class TestH5Edefault {
     }
 
     @Test
-    public void testH5Eget_current_stack_pop() {
-        long num_msg = -1;
+    public void testH5Eget_current_stack_pop()
+    {
+        long num_msg         = -1;
         long num_msg_default = -1;
-        long saved_num_msg = -1;
-        long stack_id = -1;
+        long saved_num_msg   = -1;
+        long stack_id        = -1;
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            //err.printStackTrace(); //This will clear the error stack
+            // err.printStackTrace(); //This will clear the error stack
         }
 
         // Verify there are error messages on the stack and save it
@@ -179,7 +187,8 @@ public class TestH5Edefault {
             fail("H5.H5Eget_current_stack: " + err);
         }
         assertFalse("H5.H5Eget_current_stack: get_current_stack - " + stack_id, stack_id < 0);
-        assertFalse("H5.H5Eget_current_stack: get_current_stack - " + stack_id, stack_id == HDF5Constants.H5E_DEFAULT);
+        assertFalse("H5.H5Eget_current_stack: get_current_stack - " + stack_id,
+                    stack_id == HDF5Constants.H5E_DEFAULT);
 
         // Verify the stack is empty
         try {
@@ -206,7 +215,7 @@ public class TestH5Edefault {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            //err.printStackTrace(); //This will clear the error stack
+            // err.printStackTrace(); //This will clear the error stack
         }
 
         // Verify we have a nonzero number of messages and save it
@@ -243,37 +252,44 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eclose_stack_invalid_stackid() throws Throwable {
+    public void testH5Eclose_stack_invalid_stackid() throws Throwable
+    {
         H5.H5Eclose_stack(-1);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eget_class_name_invalid_classid() throws Throwable {
+    public void testH5Eget_class_name_invalid_classid() throws Throwable
+    {
         H5.H5Eget_class_name(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Eget_class_name_invalid_classname() throws Throwable {
+    public void testH5Eget_class_name_invalid_classname() throws Throwable
+    {
         H5.H5Eget_class_name(HDF5Constants.H5E_DEFAULT);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eclose_msg_invalid_errid() throws Throwable {
+    public void testH5Eclose_msg_invalid_errid() throws Throwable
+    {
         H5.H5Eclose_msg(-1);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Ecreate_msg_invalid_errid() throws Throwable {
+    public void testH5Ecreate_msg_invalid_errid() throws Throwable
+    {
         H5.H5Ecreate_msg(-1, HDF5Constants.H5E_MAJOR, "null");
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eget_msg_invalid_msgid() throws Throwable {
+    public void testH5Eget_msg_invalid_msgid() throws Throwable
+    {
         H5.H5Eget_msg(-1, null);
     }
 
     @Test
-    public void testH5Ecreate_stack() {
+    public void testH5Ecreate_stack()
+    {
         try {
             long stack_id = H5.H5Ecreate_stack();
             assertTrue("H5.H5Ecreate_stack", stack_id > 0);
@@ -286,14 +302,16 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eset_current_stack_invalid_stkid() throws Throwable {
+    public void testH5Eset_current_stack_invalid_stkid() throws Throwable
+    {
         H5.H5Eset_current_stack(-1);
     }
 
     @Test
-    public void testH5Eset_current_stack() {
-        long num_msg = -1;
-        long stack_id = -1;
+    public void testH5Eset_current_stack()
+    {
+        long num_msg       = -1;
+        long stack_id      = -1;
         long saved_num_msg = -1;
 
         // Generate errors on the default stack
@@ -301,7 +319,7 @@ public class TestH5Edefault {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            //err.printStackTrace(); //This will clear the error stack
+            // err.printStackTrace(); //This will clear the error stack
         }
 
         // Verify we have a nonzero number of messages and save it
@@ -324,7 +342,8 @@ public class TestH5Edefault {
             fail("H5.H5Eset_current_stack: " + err);
         }
         assertFalse("H5.H5Eset_current_stack: get_current_stack - " + stack_id, stack_id < 0);
-        assertFalse("H5.H5Eset_current_stack: get_current_stack - " + stack_id, stack_id == HDF5Constants.H5E_DEFAULT);
+        assertFalse("H5.H5Eset_current_stack: get_current_stack - " + stack_id,
+                    stack_id == HDF5Constants.H5E_DEFAULT);
 
         // Verify the copy has the same number of messages as the original stack
         try {
@@ -341,7 +360,7 @@ public class TestH5Edefault {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            //err.printStackTrace(); //This will clear the error stack
+            // err.printStackTrace(); //This will clear the error stack
         }
 
         // Verify we have the same number of messages as before
@@ -388,13 +407,15 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Epop_invalid_stkid() throws Throwable {
+    public void testH5Epop_invalid_stkid() throws Throwable
+    {
         H5.H5Epop(-1, 0);
     }
 
     @Test
-    public void testH5Epop() throws Throwable {
-        long num_msg = -1;
+    public void testH5Epop() throws Throwable
+    {
+        long num_msg       = -1;
         long saved_num_msg = -1;
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
@@ -422,28 +443,33 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Epush_invalid_stkid() throws Throwable {
+    public void testH5Epush_invalid_stkid() throws Throwable
+    {
         H5.H5Epush(-1, "Invalid", "Invalid", 0, -1, -1, -1, "Invalid message");
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Epush_null_name() throws Throwable {
-        H5.H5Epush(HDF5Constants.H5E_DEFAULT, null, "Invalid", 0, HDF5Constants.H5E_DEFAULT, HDF5Constants.H5E_DEFAULT, HDF5Constants.H5E_DEFAULT, "Invalid message");
+    public void testH5Epush_null_name() throws Throwable
+    {
+        H5.H5Epush(HDF5Constants.H5E_DEFAULT, null, "Invalid", 0, HDF5Constants.H5E_DEFAULT,
+                   HDF5Constants.H5E_DEFAULT, HDF5Constants.H5E_DEFAULT, "Invalid message");
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5EprintInt_invalid_classid() throws Throwable {
+    public void testH5EprintInt_invalid_classid() throws Throwable
+    {
         H5.H5Eprint2(-1, null);
     }
 
     @Ignore
-    public void testH5EprintInt() {
+    public void testH5EprintInt()
+    {
         /*
-        * If HDF5_VOL_CONNECTOR is set, this might not be the
-        * native connector and the error stack might be different.
-        * Only check for the specific error stack if the native
-        * connector is being used.
-        */
+         * If HDF5_VOL_CONNECTOR is set, this might not be the
+         * native connector and the error stack might be different.
+         * Only check for the specific error stack if the native
+         * connector is being used.
+         */
         String connector = System.getenv("HDF5_VOL_CONNECTOR");
         if (connector == null) {
             try {
@@ -462,7 +488,8 @@ public class TestH5Edefault {
     }
 
     @Test
-    public void testH5EclearInt() {
+    public void testH5EclearInt()
+    {
         try {
             H5.H5Eclear(HDF5Constants.H5E_DEFAULT);
         }
@@ -473,12 +500,14 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eclear2_invalid_stkid() throws Throwable {
+    public void testH5Eclear2_invalid_stkid() throws Throwable
+    {
         H5.H5Eclear2(-1);
     }
 
     @Test
-    public void testH5Eclear() {
+    public void testH5Eclear()
+    {
         try {
             H5.H5Eclear2(HDF5Constants.H5E_DEFAULT);
         }
@@ -489,7 +518,8 @@ public class TestH5Edefault {
     }
 
     @Test
-    public void testH5Eclear2_with_msg() {
+    public void testH5Eclear2_with_msg()
+    {
         long num_msg = -1;
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
@@ -516,12 +546,14 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eauto_is_v2_invalid_stkid() throws Throwable {
+    public void testH5Eauto_is_v2_invalid_stkid() throws Throwable
+    {
         H5.H5Eauto_is_v2(-1);
     }
 
     @Test
-    public void testH5Eauto_is_v2() {
+    public void testH5Eauto_is_v2()
+    {
         boolean is_v2 = false;
         try {
             is_v2 = H5.H5Eauto_is_v2(HDF5Constants.H5E_DEFAULT);
@@ -534,12 +566,14 @@ public class TestH5Edefault {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eget_num_invalid_stkid() throws Throwable {
+    public void testH5Eget_num_invalid_stkid() throws Throwable
+    {
         H5.H5Eget_num(-1);
     }
 
     @Test
-    public void testH5Eget_num() {
+    public void testH5Eget_num()
+    {
         long num_msg = -1;
         try {
             num_msg = H5.H5Eget_num(HDF5Constants.H5E_DEFAULT);
@@ -552,7 +586,8 @@ public class TestH5Edefault {
     }
 
     @Test
-    public void testH5Eget_num_with_msg() {
+    public void testH5Eget_num_with_msg()
+    {
         long num_msg = -1;
         try {
             H5.H5Fopen("test", HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
@@ -568,6 +603,4 @@ public class TestH5Edefault {
         }
         assertTrue("H5.H5Eget_num_with_msg #:" + num_msg, num_msg > 0);
     }
-
 }
-
diff --git a/java/test/TestH5Eparams.java b/java/test/TestH5Eparams.java
index e55f1fc..4300ae6 100644
--- a/java/test/TestH5Eparams.java
+++ b/java/test/TestH5Eparams.java
@@ -22,9 +22,9 @@ import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
-import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.callbacks.H5E_walk_cb;
 import hdf.hdf5lib.callbacks.H5E_walk_t;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.structs.H5E_error2_t;
 
 import org.junit.After;
@@ -35,19 +35,21 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Eparams {
-    @Rule public TestName testname = new TestName();
-    long hdf_java_classid = -1;
-    long current_stackid = -1;
+    @Rule
+    public TestName testname = new TestName();
+    long hdf_java_classid    = -1;
+    long current_stackid     = -1;
 
     @Before
-    public void H5Eget_stack_class() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void H5Eget_stack_class()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         hdf_java_classid = -1;
         try {
             hdf_java_classid = H5.H5Eregister_class("HDF-Java-Error", "hdf-java", "2.5");
-            current_stackid = H5.H5Eget_current_stack();
+            current_stackid  = H5.H5Eget_current_stack();
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -56,7 +58,8 @@ public class TestH5Eparams {
     }
 
     @After
-    public void H5Erestore_stack_class() {
+    public void H5Erestore_stack_class()
+    {
         try {
             H5.H5Eunregister_class(hdf_java_classid);
             hdf_java_classid = -1;
@@ -71,7 +74,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eget_class_name() {
+    public void testH5Eget_class_name()
+    {
         try {
             String class_name = H5.H5Eget_class_name(hdf_java_classid);
             assertNotNull("H5.H5Eget_class_name: " + class_name, class_name);
@@ -84,7 +88,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eprint2() {
+    public void testH5Eprint2()
+    {
         try {
             assertFalse(current_stackid < 0);
             H5.H5Eprint2(current_stackid, null);
@@ -96,17 +101,20 @@ public class TestH5Eparams {
     }
 
     @Ignore("Tested with create_msg_major[minor]")
-    public void testH5Eclose_msg() {
+    public void testH5Eclose_msg()
+    {
         fail("Not yet implemented");
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ecreate_msg_name_null() throws Throwable {
+    public void testH5Ecreate_msg_name_null() throws Throwable
+    {
         H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MAJOR, null);
     }
 
     @Test
-    public void testH5Ecreate_msg_major() {
+    public void testH5Ecreate_msg_major()
+    {
         try {
             long err_id = H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MAJOR, "Error in Test");
             assertFalse("H5.H5Ecreate_msg_major: " + err_id, err_id < 0);
@@ -119,9 +127,11 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Ecreate_msg_minor() {
+    public void testH5Ecreate_msg_minor()
+    {
         try {
-            long err_id = H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MINOR, "Error in Test Function");
+            long err_id =
+                H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MINOR, "Error in Test Function");
             assertFalse("H5.H5Ecreate_msg_minor: " + err_id, err_id < 0);
             H5.H5Eclose_msg(err_id);
         }
@@ -132,10 +142,11 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eget_msg() {
-        int[] error_msg_type = { HDF5Constants.H5E_MINOR };
-        long err_id = -1;
-        String msg = null;
+    public void testH5Eget_msg()
+    {
+        int[] error_msg_type = {HDF5Constants.H5E_MINOR};
+        long err_id          = -1;
+        String msg           = null;
         try {
             err_id = H5.H5Ecreate_msg(hdf_java_classid, HDF5Constants.H5E_MAJOR, "Error in Test");
         }
@@ -164,7 +175,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Ecreate_stack() {
+    public void testH5Ecreate_stack()
+    {
         long stk_id = -1;
         try {
             stk_id = H5.H5Ecreate_stack();
@@ -184,7 +196,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5EprintInt() {
+    public void testH5EprintInt()
+    {
         assertFalse(current_stackid < 0);
         try {
             H5.H5Eprint2(current_stackid, null);
@@ -196,7 +209,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5EclearInt() {
+    public void testH5EclearInt()
+    {
         try {
             H5.H5Eclear(current_stackid);
         }
@@ -207,7 +221,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eclear2() {
+    public void testH5Eclear2()
+    {
         try {
             H5.H5Eclear2(current_stackid);
         }
@@ -218,7 +233,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eauto_is_v2() {
+    public void testH5Eauto_is_v2()
+    {
         boolean is_v2 = false;
         try {
             is_v2 = H5.H5Eauto_is_v2(current_stackid);
@@ -231,7 +247,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eget_num() {
+    public void testH5Eget_num()
+    {
         long num_msg = -1;
         try {
             num_msg = H5.H5Eget_num(current_stackid);
@@ -244,7 +261,8 @@ public class TestH5Eparams {
     }
 
     @Test
-    public void testH5Eget_num_with_msg() {
+    public void testH5Eget_num_with_msg()
+    {
         try {
             H5.H5Eset_current_stack(current_stackid);
         }
@@ -277,5 +295,4 @@ public class TestH5Eparams {
         }
         assertTrue("H5.H5Eget_num_with_msg #:" + num_msg, num_msg > 0);
     }
-
 }
diff --git a/java/test/TestH5Eregister.java b/java/test/TestH5Eregister.java
index 99e8e5f..b4c63e0 100644
--- a/java/test/TestH5Eregister.java
+++ b/java/test/TestH5Eregister.java
@@ -14,6 +14,7 @@ package test;
 
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 
 import org.junit.After;
@@ -23,40 +24,48 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Eregister {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Eregister_class_cls_name_null() throws Throwable {
+    public void testH5Eregister_class_cls_name_null() throws Throwable
+    {
         H5.H5Eregister_class(null, "libname", "version");
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Eregister_class_lib_name_null() throws Throwable {
+    public void testH5Eregister_class_lib_name_null() throws Throwable
+    {
         H5.H5Eregister_class("clsname", null, "version");
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Eregister_class_version_null() throws Throwable {
+    public void testH5Eregister_class_version_null() throws Throwable
+    {
         H5.H5Eregister_class("clsname", "libname", null);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Eunregister_class_invalid_classid() throws Throwable {
+    public void testH5Eunregister_class_invalid_classid() throws Throwable
+    {
         H5.H5Eunregister_class(-1);
     }
 
     @Test
-    public void testH5Eregister_class() {
+    public void testH5Eregister_class()
+    {
         long hdf_java_classid = -1;
         try {
             hdf_java_classid = H5.H5Eregister_class("HDF-Java-Error", "hdf-java", "2.5");
diff --git a/java/test/TestH5F.java b/java/test/TestH5F.java
index 16786b9..fde2739 100644
--- a/java/test/TestH5F.java
+++ b/java/test/TestH5F.java
@@ -30,49 +30,58 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5F {
-    @Rule public TestName testname = new TestName();
-    private static final String H5_FILE = "testF.h5";
+    @Rule
+    public TestName testname             = new TestName();
+    private static final String H5_FILE  = "testF.h5";
     private static final String H5_FILE2 = "testF2.h5";
 
-    private static final int COUNT_OBJ_FILE = 1;
-    private static final int COUNT_OBJ_DATASET = 0;
-    private static final int COUNT_OBJ_GROUP = 0;
+    private static final int COUNT_OBJ_FILE     = 1;
+    private static final int COUNT_OBJ_DATASET  = 0;
+    private static final int COUNT_OBJ_GROUP    = 0;
     private static final int COUNT_OBJ_DATATYPE = 0;
-    private static final int COUNT_OBJ_ATTR = 0;
-    private static final int COUNT_OBJ_ALL = (COUNT_OBJ_FILE
-            + COUNT_OBJ_DATASET + COUNT_OBJ_GROUP + COUNT_OBJ_DATATYPE + COUNT_OBJ_ATTR);
-    private static final int[] OBJ_COUNTS = { COUNT_OBJ_FILE,
-            COUNT_OBJ_DATASET, COUNT_OBJ_GROUP, COUNT_OBJ_DATATYPE,
-            COUNT_OBJ_ATTR, COUNT_OBJ_ALL };
-    private static final int[] OBJ_TYPES = { HDF5Constants.H5F_OBJ_FILE,
-            HDF5Constants.H5F_OBJ_DATASET, HDF5Constants.H5F_OBJ_GROUP,
-            HDF5Constants.H5F_OBJ_DATATYPE, HDF5Constants.H5F_OBJ_ATTR,
-            HDF5Constants.H5F_OBJ_ALL };
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-
-    private final void _deleteFile(String filename) {
+    private static final int COUNT_OBJ_ATTR     = 0;
+    private static final int COUNT_OBJ_ALL =
+        (COUNT_OBJ_FILE + COUNT_OBJ_DATASET + COUNT_OBJ_GROUP + COUNT_OBJ_DATATYPE + COUNT_OBJ_ATTR);
+    private static final int[] OBJ_COUNTS = {COUNT_OBJ_FILE,     COUNT_OBJ_DATASET, COUNT_OBJ_GROUP,
+                                             COUNT_OBJ_DATATYPE, COUNT_OBJ_ATTR,    COUNT_OBJ_ALL};
+    private static final int[] OBJ_TYPES  = {HDF5Constants.H5F_OBJ_FILE,  HDF5Constants.H5F_OBJ_DATASET,
+                                            HDF5Constants.H5F_OBJ_GROUP, HDF5Constants.H5F_OBJ_DATATYPE,
+                                            HDF5Constants.H5F_OBJ_ATTR,  HDF5Constants.H5F_OBJ_ALL};
+    long H5fid                            = HDF5Constants.H5I_INVALID_HID;
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void createH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
-        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT);
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
             H5fid = HDF5Constants.H5I_INVALID_HID;
         }
         _deleteFile(H5_FILE);
@@ -80,7 +89,8 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_create_plist() {
+    public void testH5Fget_create_plist()
+    {
         long plist = HDF5Constants.H5I_INVALID_HID;
 
         try {
@@ -90,13 +100,23 @@ public class TestH5F {
             fail("H5.H5Fget_create_plist: " + err);
         }
         assertTrue(plist > 0);
-        try {H5.H5Pclose(plist);} catch (HDF5LibraryException e) {e.printStackTrace();}
+        try {
+            H5.H5Pclose(plist);
+        }
+        catch (HDF5LibraryException e) {
+            e.printStackTrace();
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Fget_create_plist_closed() throws Throwable {
+    public void testH5Fget_create_plist_closed() throws Throwable
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
 
         // it should fail because the file was closed.
@@ -104,7 +124,8 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_access_plist() {
+    public void testH5Fget_access_plist()
+    {
         long plist = HDF5Constants.H5I_INVALID_HID;
 
         try {
@@ -114,13 +135,23 @@ public class TestH5F {
             fail("H5.H5Fget_access_plist: " + err);
         }
         assertTrue(plist > 0);
-        try {H5.H5Pclose(plist);} catch (HDF5LibraryException e) {e.printStackTrace();}
+        try {
+            H5.H5Pclose(plist);
+        }
+        catch (HDF5LibraryException e) {
+            e.printStackTrace();
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Fget_access_plist_closed() throws Throwable {
+    public void testH5Fget_access_plist_closed() throws Throwable
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
 
         // it should fail because the file was closed.
@@ -128,17 +159,21 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_intent_rdwr() {
+    public void testH5Fget_intent_rdwr()
+    {
         int intent = 0;
 
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
             H5fid = HDF5Constants.H5I_INVALID_HID;
         }
 
         try {
-            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -153,17 +188,21 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_intent_rdonly() {
+    public void testH5Fget_intent_rdonly()
+    {
         int intent = 0;
 
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
             H5fid = HDF5Constants.H5I_INVALID_HID;
         }
 
         try {
-            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY,
-                    HDF5Constants.H5P_DEFAULT);
+            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -178,26 +217,26 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_fileno_same() {
+    public void testH5Fget_fileno_same()
+    {
         long fileno1 = 0;
         long fileno2 = 0;
-        long fid1 = HDF5Constants.H5I_INVALID_HID;
-        long fid2 = HDF5Constants.H5I_INVALID_HID;
+        long fid1    = HDF5Constants.H5I_INVALID_HID;
+        long fid2    = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid1 = H5.H5Fcreate(H5_FILE2, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            fid1 = H5.H5Fcreate(H5_FILE2, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(fid1, HDF5Constants.H5F_SCOPE_LOCAL);
             assertTrue("H5Fcreate failed", fid1 > 0);
-            fid2 = H5.H5Fopen(H5_FILE2, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid2 = H5.H5Fopen(H5_FILE2, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
             assertTrue("H5Fopen failed", fid2 > 0);
             fileno1 = H5.H5Fget_fileno(fid1);
-            assertTrue("H5Fget_fileno1="+fileno1, fileno1 > 0);
+            assertTrue("H5Fget_fileno1=" + fileno1, fileno1 > 0);
             fileno2 = H5.H5Fget_fileno(fid2);
-            assertTrue("H5Fget_fileno2="+fileno2, fileno2 > 0);
+            assertTrue("H5Fget_fileno2=" + fileno2, fileno2 > 0);
 
-            assertEquals("fileno1["+fileno1+"]!=fileno2["+fileno2+"]", fileno1, fileno2);
+            assertEquals("fileno1[" + fileno1 + "]!=fileno2[" + fileno2 + "]", fileno1, fileno2);
         }
         catch (Throwable err) {
             fail("testH5Fget_fileno_same: " + err);
@@ -209,23 +248,24 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_fileno_diff() {
+    public void testH5Fget_fileno_diff()
+    {
         long fileno1 = 0;
         long fileno2 = 0;
-        long fid2 = HDF5Constants.H5I_INVALID_HID;
+        long fid2    = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid2 = H5.H5Fcreate(H5_FILE2, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            fid2 = H5.H5Fcreate(H5_FILE2, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(fid2, HDF5Constants.H5F_SCOPE_LOCAL);
             assertTrue("H5Fcreate failed", fid2 > 0);
 
             fileno1 = H5.H5Fget_fileno(H5fid);
-            assertTrue("H5Fget_fileno1="+fileno1, fileno1 > 0);
+            assertTrue("H5Fget_fileno1=" + fileno1, fileno1 > 0);
             fileno2 = H5.H5Fget_fileno(fid2);
-            assertTrue("H5Fget_fileno2="+fileno2, fileno2 > 0);
+            assertTrue("H5Fget_fileno2=" + fileno2, fileno2 > 0);
 
-            assertNotEquals("fileno1["+fileno1+"]==fileno2["+fileno2+"]", fileno1, fileno2);
+            assertNotEquals("fileno1[" + fileno1 + "]==fileno2[" + fileno2 + "]", fileno1, fileno2);
         }
         catch (Throwable err) {
             fail("testH5Fget_fileno_diff: " + err);
@@ -236,7 +276,8 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_obj_count() {
+    public void testH5Fget_obj_count()
+    {
         long count = -1;
 
         for (int i = 0; i < OBJ_TYPES.length; i++) {
@@ -252,10 +293,11 @@ public class TestH5F {
     }
 
     @Test
-    public void testH5Fget_obj_ids() {
-        long count = 0;
-        long max_objs = 100;
-        long[] obj_id_list = new long[(int)max_objs];
+    public void testH5Fget_obj_ids()
+    {
+        long count            = 0;
+        long max_objs         = 100;
+        long[] obj_id_list    = new long[(int)max_objs];
         int[] open_obj_counts = new int[OBJ_TYPES.length];
 
         for (int i = 0; i < OBJ_TYPES.length; i++)
@@ -267,8 +309,7 @@ public class TestH5F {
 
         for (int i = 0; i < OBJ_TYPES.length; i++) {
             try {
-                count = H5.H5Fget_obj_ids(H5fid, OBJ_TYPES[i], max_objs,
-                        obj_id_list);
+                count = H5.H5Fget_obj_ids(H5fid, OBJ_TYPES[i], max_objs, obj_id_list);
             }
             catch (Throwable err) {
                 fail("H5.H5Fget_obj_ids: " + err);
diff --git a/java/test/TestH5Fbasic.java b/java/test/TestH5Fbasic.java
index 4f3d928..37be943 100644
--- a/java/test/TestH5Fbasic.java
+++ b/java/test/TestH5Fbasic.java
@@ -31,45 +31,59 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Fbasic {
-    @Rule public TestName testname = new TestName();
-    private static final String H5_FILE = "testFb.h5";
+    @Rule
+    public TestName testname             = new TestName();
+    private static final String H5_FILE  = "testFb.h5";
     private static final String TXT_FILE = "testFb.txt";
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                           = HDF5Constants.H5I_INVALID_HID;
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void createH5file() throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
-        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT);
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
     @Test
-    public void testH5Fcreate() {
+    public void testH5Fcreate()
+    {
         assertTrue(H5fid > 0);
     }
 
     @Test
-    public void testH5Fis_accessible() {
+    public void testH5Fis_accessible()
+    {
         boolean isH5 = false;
 
         try {
@@ -82,18 +96,19 @@ public class TestH5Fbasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Fcreate_EXCL() throws Throwable {
-        H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_EXCL,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Fcreate_EXCL() throws Throwable
+    {
+        H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_EXCL, HDF5Constants.H5P_DEFAULT,
+                     HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Fopen_read_only() throws Throwable {
+    public void testH5Fopen_read_only() throws Throwable
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -108,8 +123,7 @@ public class TestH5Fbasic {
         File file = new File(H5_FILE);
         if (file.setWritable(false)) {
             // this should fail.
-            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
 
             try {
                 H5.H5Fclose(fid);
@@ -123,13 +137,13 @@ public class TestH5Fbasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Freopen_closed() throws Throwable {
-        long fid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Freopen_closed() throws Throwable
+    {
+        long fid  = HDF5Constants.H5I_INVALID_HID;
         long fid2 = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -146,13 +160,13 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5Freopen() {
-        long fid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Freopen()
+    {
+        long fid  = HDF5Constants.H5I_INVALID_HID;
         long fid2 = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -180,12 +194,12 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5Fclose() {
+    public void testH5Fclose()
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -200,12 +214,12 @@ public class TestH5Fbasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Fclose_twice() throws Throwable {
+    public void testH5Fclose_twice() throws Throwable
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR,
-                    HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -223,7 +237,8 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5Fget_freespace() {
+    public void testH5Fget_freespace()
+    {
         long freeSpace = 0;
 
         try {
@@ -238,7 +253,8 @@ public class TestH5Fbasic {
     // TODO add/and delete objects and test freespace
 
     @Test
-    public void testH5Fget_filesize() {
+    public void testH5Fget_filesize()
+    {
         long fileSize = 0;
 
         try {
@@ -253,7 +269,8 @@ public class TestH5Fbasic {
     // TODO add/and delete objects and test freespace
 
     @Test
-    public void testH5Fget_mdc_hit_rate() {
+    public void testH5Fget_mdc_hit_rate()
+    {
         double rate;
 
         try {
@@ -265,8 +282,9 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5Fget_mdc_size() {
-        int nentries = -1;
+    public void testH5Fget_mdc_size()
+    {
+        int nentries       = -1;
         long cache_sizes[] = new long[3];
 
         try {
@@ -281,7 +299,8 @@ public class TestH5Fbasic {
     // TODO: test more cases of different cache sizes.
 
     @Test
-    public void testH5Freset_mdc_hit_rate_stats() {
+    public void testH5Freset_mdc_hit_rate_stats()
+    {
 
         try {
             H5.H5Freset_mdc_hit_rate_stats(H5fid);
@@ -292,7 +311,8 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5Fget_name() {
+    public void testH5Fget_name()
+    {
         String fname = null;
 
         try {
@@ -306,7 +326,8 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5Fclear_elink_file_cache() {
+    public void testH5Fclear_elink_file_cache()
+    {
 
         try {
             H5.H5Fclear_elink_file_cache(H5fid);
@@ -317,7 +338,8 @@ public class TestH5Fbasic {
     }
 
     @Test
-    public void testH5F_dset_no_attrs_hint() {
+    public void testH5F_dset_no_attrs_hint()
+    {
         boolean ret_val_id = true;
         try {
             ret_val_id = H5.H5Fget_dset_no_attrs_hint(H5fid);
diff --git a/java/test/TestH5Fparams.java b/java/test/TestH5Fparams.java
index 0376485..6accc3b 100644
--- a/java/test/TestH5Fparams.java
+++ b/java/test/TestH5Fparams.java
@@ -32,46 +32,54 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Fparams {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Fcreate_null() throws Throwable {
-        H5.H5Fcreate(null, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Fcreate_null() throws Throwable
+    {
+        H5.H5Fcreate(null, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Fopen_null() throws Throwable {
+    public void testH5Fopen_null() throws Throwable
+    {
         H5.H5Fopen(null, HDF5Constants.H5F_ACC_RDWR, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Fis_accessible_null() throws Throwable {
+    public void testH5Fis_accessible_null() throws Throwable
+    {
         H5.H5Fis_accessible(null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Fmount_null() throws Throwable {
+    public void testH5Fmount_null() throws Throwable
+    {
         H5.H5Fmount(-1, null, -1, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Funmount_null() throws Throwable {
+    public void testH5Funmount_null() throws Throwable
+    {
         H5.H5Funmount(-1, null);
     }
 
     @Ignore
-    public void testH5Fis_hdf5_text() {
+    public void testH5Fis_hdf5_text()
+    {
         File txtFile = null;
         boolean isH5 = false;
 
@@ -91,25 +99,27 @@ public class TestH5Fparams {
             txtFile.delete();
         }
         catch (SecurityException e) {
-            ;// e.printStackTrace();
+            ; // e.printStackTrace();
         }
     }
 
-    @Test//(expected = HDF5LibraryException.class)
-    public void testH5Fclose_negative() throws Throwable {
+    @Test //(expected = HDF5LibraryException.class)
+    public void testH5Fclose_negative() throws Throwable
+    {
         // cannot close a file with negative id.
         int fid = H5.H5Fclose(-1);
         assertTrue(fid == 0);
     }
 
     @Test
-    public void testH5Fcreate() {
-        long fid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Fcreate()
+    {
+        long fid  = HDF5Constants.H5I_INVALID_HID;
         File file = null;
 
         try {
-            fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
             if (fid > 0) {
                 H5.H5Fclose(fid);
             }
@@ -124,18 +134,19 @@ public class TestH5Fparams {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
     }
 
     @Test
-    public void testH5Fflush_global() {
+    public void testH5Fflush_global()
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -156,12 +167,13 @@ public class TestH5Fparams {
     }
 
     @Test
-    public void testH5Fflush_local() {
+    public void testH5Fflush_local()
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
-            fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             fail("H5.H5Fopen: " + err);
@@ -182,13 +194,14 @@ public class TestH5Fparams {
     }
 
     @Test
-    public void testH5Fget_info() {
+    public void testH5Fget_info()
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
             try {
-                fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 fail("H5.H5Fcreate: " + err);
@@ -205,21 +218,26 @@ public class TestH5Fparams {
             }
         }
         catch (Exception e) {
-           e.printStackTrace();
+            e.printStackTrace();
         }
         finally {
-            try {H5.H5Fclose(fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(fid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
-    @Ignore//(expected = HDF5FunctionArgumentException.class)
-    public void testH5Fset_libver_bounds_invalidlow() throws Throwable {
+    @Ignore //(expected = HDF5FunctionArgumentException.class)
+    public void testH5Fset_libver_bounds_invalidlow() throws Throwable
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
             try {
-                fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 fail("H5.H5Fcreate: " + err);
@@ -227,26 +245,36 @@ public class TestH5Fparams {
             H5.H5Fset_libver_bounds(fid, 5, HDF5Constants.H5F_LIBVER_LATEST);
         }
         finally {
-            try {H5.H5Fclose(fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(fid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
-    @Ignore//(expected = HDF5FunctionArgumentException.class)
-    public void testH5Fset_libver_bounds_invalidhigh() throws Throwable {
+    @Ignore //(expected = HDF5FunctionArgumentException.class)
+    public void testH5Fset_libver_bounds_invalidhigh() throws Throwable
+    {
         long fid = HDF5Constants.H5I_INVALID_HID;
 
         try {
             try {
-                fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                fid = H5.H5Fcreate("test.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                   HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 fail("H5.H5Fcreate: " + err);
             }
-            H5.H5Fset_libver_bounds(fid, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST+1);
+            H5.H5Fset_libver_bounds(fid, HDF5Constants.H5F_LIBVER_LATEST,
+                                    HDF5Constants.H5F_LIBVER_LATEST + 1);
         }
         finally {
-            try {H5.H5Fclose(fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(fid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 }
diff --git a/java/test/TestH5Fswmr.java b/java/test/TestH5Fswmr.java
index 1ec78fe..823640d 100644
--- a/java/test/TestH5Fswmr.java
+++ b/java/test/TestH5Fswmr.java
@@ -29,25 +29,31 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Fswmr {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testswmr.h5";
 
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
+    long H5fid  = HDF5Constants.H5I_INVALID_HID;
     long H5fapl = HDF5Constants.H5I_INVALID_HID;
     long H5fcpl = HDF5Constants.H5I_INVALID_HID;
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void createH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         H5fapl = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
@@ -59,17 +65,30 @@ public class TestH5Fswmr {
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5fapl > 0) {
-            try {H5.H5Pclose(H5fapl);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5fapl);
+            }
+            catch (Exception ex) {
+            }
             H5fapl = HDF5Constants.H5I_INVALID_HID;
         }
         if (H5fcpl > 0) {
-            try {H5.H5Pclose(H5fcpl);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5fcpl);
+            }
+            catch (Exception ex) {
+            }
             H5fcpl = HDF5Constants.H5I_INVALID_HID;
         }
-       if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+        if (H5fid > 0) {
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
             H5fid = HDF5Constants.H5I_INVALID_HID;
         }
         _deleteFile(H5_FILE);
@@ -77,7 +96,8 @@ public class TestH5Fswmr {
     }
 
     @Test
-    public void testH5Fstart_swmr_write() {
+    public void testH5Fstart_swmr_write()
+    {
         try {
             H5.H5Fstart_swmr_write(H5fid);
         }
@@ -87,7 +107,8 @@ public class TestH5Fswmr {
     }
 
     @Test
-    public void testH5Fswmr_read_attempts() {
+    public void testH5Fswmr_read_attempts()
+    {
         long read_attempts = 0;
 
         try {
diff --git a/java/test/TestH5G.java b/java/test/TestH5G.java
index edf2cbe..1f6da31 100644
--- a/java/test/TestH5G.java
+++ b/java/test/TestH5G.java
@@ -32,20 +32,22 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5G {
-    @Rule public TestName testname = new TestName();
-    private static final String H5_FILE = "testG.h5";
-    private static final String H5_FILE2 = "testG2.h5";
-    private static final String[] GROUPS = { "/G1", "/G1/G11", "/G1/G12",
-            "/G1/G11/G111", "/G1/G11/G112", "/G1/G11/G113", "/G1/G11/G114" };
-    private static final String[] GROUPS2 = { "/G1", "/G1/G14", "/G1/G12", "/G1/G13", "/G1/G11"};
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5fid2 = HDF5Constants.H5I_INVALID_HID;
-
-    private final long _createGroup(long fid, String name) {
+    @Rule
+    public TestName testname              = new TestName();
+    private static final String H5_FILE   = "testG.h5";
+    private static final String H5_FILE2  = "testG2.h5";
+    private static final String[] GROUPS  = {"/G1",          "/G1/G11",      "/G1/G12",     "/G1/G11/G111",
+                                            "/G1/G11/G112", "/G1/G11/G113", "/G1/G11/G114"};
+    private static final String[] GROUPS2 = {"/G1", "/G1/G14", "/G1/G12", "/G1/G13", "/G1/G11"};
+    long H5fid                            = HDF5Constants.H5I_INVALID_HID;
+    long H5fid2                           = HDF5Constants.H5I_INVALID_HID;
+
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -56,41 +58,51 @@ public class TestH5G {
         return gid;
     }
 
-    private final long _createGroup2(long fid, String name) {
-        long gid = HDF5Constants.H5I_INVALID_HID;
+    private final long _createGroup2(long fid, String name)
+    {
+        long gid  = HDF5Constants.H5I_INVALID_HID;
         long gcpl = HDF5Constants.H5I_INVALID_HID;
         try {
-            gcpl = H5.H5Pcreate(HDF5Constants.H5P_GROUP_CREATE); //create gcpl
+            gcpl = H5.H5Pcreate(HDF5Constants.H5P_GROUP_CREATE); // create gcpl
         }
         catch (final Exception ex) {
             fail("H5.H5Pcreate(): " + ex);
         }
         assertTrue("TestH5G._createGroup2: ", gcpl >= 0);
         try {
-            H5.H5Pset_link_creation_order(gcpl, HDF5Constants.H5P_CRT_ORDER_TRACKED
-                    + HDF5Constants.H5P_CRT_ORDER_INDEXED); // Set link creation order
+            H5.H5Pset_link_creation_order(gcpl,
+                                          HDF5Constants.H5P_CRT_ORDER_TRACKED +
+                                              HDF5Constants.H5P_CRT_ORDER_INDEXED); // Set link creation order
         }
         catch (final Exception ex) {
-            try {H5.H5Pclose(gcpl);} catch (final Exception exx) {}
+            try {
+                H5.H5Pclose(gcpl);
+            }
+            catch (final Exception exx) {
+            }
             fail("H5.H5Pset_link_creation_order: " + ex);
         }
         try {
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                    gcpl, HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, gcpl, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gcreate: " + err);
         }
         finally {
-            try {H5.H5Pclose(gcpl);} catch (final Exception ex) {}
+            try {
+                H5.H5Pclose(gcpl);
+            }
+            catch (final Exception ex) {
+            }
         }
         assertTrue("TestH5G._createGroup2: ", gid > 0);
 
         return gid;
     }
 
-    private final long _openGroup(long fid, String name) {
+    private final long _openGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
             gid = H5.H5Gopen(fid, name, HDF5Constants.H5P_DEFAULT);
@@ -105,26 +117,31 @@ public class TestH5G {
         return gid;
     }
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void createH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
             H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT);
+                                 HDF5Constants.H5P_DEFAULT);
 
             H5fid2 = H5.H5Fcreate(H5_FILE2, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT);
+                                  HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -137,12 +154,20 @@ public class TestH5G {
 
         for (int i = 0; i < GROUPS.length; i++) {
             gid = _createGroup(H5fid, GROUPS[i]);
-            try {H5.H5Gclose(gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
 
         for (int i = 0; i < GROUPS2.length; i++) {
             gid = _createGroup2(H5fid2, GROUPS2[i]);
-            try {H5.H5Gclose(gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -150,20 +175,30 @@ public class TestH5G {
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
         if (H5fid2 > 0) {
-            try {H5.H5Fclose(H5fid2);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid2);
+            }
+            catch (Exception ex) {
+            }
         }
-       _deleteFile(H5_FILE);
-       _deleteFile(H5_FILE2);
-       System.out.println();
+        _deleteFile(H5_FILE);
+        _deleteFile(H5_FILE2);
+        System.out.println();
     }
 
     @Test
-    public void testH5Gopen() {
+    public void testH5Gopen()
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         for (int i = 0; i < GROUPS.length; i++) {
             try {
@@ -183,7 +218,8 @@ public class TestH5G {
     }
 
     @Test
-    public void testH5Gget_create_plist() {
+    public void testH5Gget_create_plist()
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         long pid = HDF5Constants.H5I_INVALID_HID;
 
@@ -215,7 +251,8 @@ public class TestH5G {
     }
 
     @Test
-    public void testH5Gget_info() {
+    public void testH5Gget_info()
+    {
         H5G_info_t info = null;
 
         for (int i = 0; i < GROUPS.length; i++) {
@@ -232,13 +269,13 @@ public class TestH5G {
     }
 
     @Test
-    public void testH5Gget_info_by_name() {
+    public void testH5Gget_info_by_name()
+    {
         H5G_info_t info = null;
 
         for (int i = 0; i < GROUPS.length; i++) {
             try {
-                info = H5.H5Gget_info_by_name(H5fid, GROUPS[i],
-                        HDF5Constants.H5P_DEFAULT);
+                info = H5.H5Gget_info_by_name(H5fid, GROUPS[i], HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -249,13 +286,13 @@ public class TestH5G {
     }
 
     @Test
-    public void testH5Gget_info_by_idx() {
+    public void testH5Gget_info_by_idx()
+    {
         H5G_info_t info = null;
         for (int i = 0; i < 2; i++) {
             try {
-                info = H5.H5Gget_info_by_idx(H5fid, "/G1",
-                        HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC,
-                        i, HDF5Constants.H5P_DEFAULT);
+                info = H5.H5Gget_info_by_idx(H5fid, "/G1", HDF5Constants.H5_INDEX_NAME,
+                                             HDF5Constants.H5_ITER_INC, i, HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -266,7 +303,8 @@ public class TestH5G {
     }
 
     @Test
-    public void testH5Gget_obj_info_all() {
+    public void testH5Gget_obj_info_all()
+    {
         H5G_info_t info = null;
 
         long gid = _openGroup(H5fid, GROUPS[0]);
@@ -279,27 +317,31 @@ public class TestH5G {
             fail("TestH5G.testH5Gget_obj_info_all: H5.H5Gget_info: " + err);
         }
         finally {
-            try {H5.H5Gclose(gid);} catch (Exception ex) { }
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
         assertNotNull("TestH5G.testH5Gget_obj_info_all: ", info);
         assertTrue("TestH5G.testH5Gget_obj_info_all: number of links is empty", info.nlinks > 0);
-        String objNames[] = new String[(int) info.nlinks];
-        int objTypes[] = new int[(int) info.nlinks];
-        int lnkTypes[] = new int[(int) info.nlinks];
-        H5O_token_t objTokens[] = new H5O_token_t[(int) info.nlinks];
+        String objNames[]       = new String[(int)info.nlinks];
+        int objTypes[]          = new int[(int)info.nlinks];
+        int lnkTypes[]          = new int[(int)info.nlinks];
+        H5O_token_t objTokens[] = new H5O_token_t[(int)info.nlinks];
 
         int names_found = 0;
         try {
-            names_found = H5.H5Gget_obj_info_all(H5fid, GROUPS[0], objNames,
-                    objTypes, lnkTypes, objTokens, HDF5Constants.H5_INDEX_NAME);
+            names_found = H5.H5Gget_obj_info_all(H5fid, GROUPS[0], objNames, objTypes, lnkTypes, objTokens,
+                                                 HDF5Constants.H5_INDEX_NAME);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5G.testH5Gget_obj_info_all: H5.H5Gget_obj_info_all: " + err);
         }
 
-        assertTrue("number found[" + names_found + "] different than expected["
-                + objNames.length + "]", names_found == objNames.length);
+        assertTrue("number found[" + names_found + "] different than expected[" + objNames.length + "]",
+                   names_found == objNames.length);
         for (int i = 0; i < objNames.length; i++) {
             assertNotNull("name #" + i + " does not exist", objNames[i]);
             assertTrue("TestH5G.testH5Gget_obj_info_all: ", objNames[i].length() > 0);
@@ -307,7 +349,8 @@ public class TestH5G {
     }
 
     @Test
-    public void testH5Gget_obj_info_all_gid() {
+    public void testH5Gget_obj_info_all_gid()
+    {
         H5G_info_t info = null;
 
         long gid = _openGroup(H5fid, GROUPS[0]);
@@ -316,25 +359,27 @@ public class TestH5G {
             info = H5.H5Gget_info(gid);
             assertNotNull("TestH5G.testH5Gget_obj_info_all_gid: ", info);
             assertTrue("TestH5G.testH5Gget_obj_info_all_gid: number of links is empty", info.nlinks > 0);
-            String objNames[] = new String[(int) info.nlinks];
-            H5O_token_t objTokens[] = new H5O_token_t[(int) info.nlinks];
-            int lnkTypes[] = new int[(int) info.nlinks];
-            int objTypes[] = new int[(int) info.nlinks];
+            String objNames[]       = new String[(int)info.nlinks];
+            H5O_token_t objTokens[] = new H5O_token_t[(int)info.nlinks];
+            int lnkTypes[]          = new int[(int)info.nlinks];
+            int objTypes[]          = new int[(int)info.nlinks];
 
             int names_found = 0;
             try {
-                names_found = H5.H5Gget_obj_info_all(gid, null, objNames, objTypes, lnkTypes,
-                        objTokens, HDF5Constants.H5_INDEX_NAME);
+                names_found = H5.H5Gget_obj_info_all(gid, null, objNames, objTypes, lnkTypes, objTokens,
+                                                     HDF5Constants.H5_INDEX_NAME);
             }
             catch (Throwable err) {
                 err.printStackTrace();
                 fail("TestH5G.testH5Gget_obj_info_all_gid: H5.H5Gget_obj_info_all: " + err);
             }
 
-            assertTrue("TestH5G.testH5Gget_obj_info_all_gid: number found[" + names_found + "] different than expected["
-                    + objNames.length + "]", names_found == objNames.length);
+            assertTrue("TestH5G.testH5Gget_obj_info_all_gid: number found[" + names_found +
+                           "] different than expected[" + objNames.length + "]",
+                       names_found == objNames.length);
             for (int i = 0; i < objNames.length; i++) {
-                assertNotNull("TestH5G.testH5Gget_obj_info_all_gid: name #" + i + " does not exist", objNames[i]);
+                assertNotNull("TestH5G.testH5Gget_obj_info_all_gid: name #" + i + " does not exist",
+                              objNames[i]);
                 assertTrue("TestH5G.testH5Gget_obj_info_all_gid: ", objNames[i].length() > 0);
             }
         }
@@ -343,12 +388,17 @@ public class TestH5G {
             fail("TestH5G.testH5Gget_obj_info_all_gid: H5.H5Gget_info: " + err);
         }
         finally {
-            try {H5.H5Gclose(gid);} catch (Exception ex) { }
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Gget_obj_info_all_gid2() {
+    public void testH5Gget_obj_info_all_gid2()
+    {
         H5G_info_t info = null;
 
         long gid = _openGroup(H5fid, GROUPS[1]);
@@ -357,25 +407,27 @@ public class TestH5G {
             info = H5.H5Gget_info(gid);
             assertNotNull("TestH5G.testH5Gget_obj_info_all_gid2: ", info);
             assertTrue("TestH5G.testH5Gget_obj_info_all_gid2: number of links is empty", info.nlinks > 0);
-            String objNames[] = new String[(int) info.nlinks];
-            H5O_token_t objTokens[] = new H5O_token_t[(int) info.nlinks];
-            int lnkTypes[] = new int[(int) info.nlinks];
-            int objTypes[] = new int[(int) info.nlinks];
+            String objNames[]       = new String[(int)info.nlinks];
+            H5O_token_t objTokens[] = new H5O_token_t[(int)info.nlinks];
+            int lnkTypes[]          = new int[(int)info.nlinks];
+            int objTypes[]          = new int[(int)info.nlinks];
 
             int names_found = 0;
             try {
-                names_found = H5.H5Gget_obj_info_all(gid, null, objNames, objTypes, lnkTypes,
-                        objTokens, HDF5Constants.H5_INDEX_NAME);
+                names_found = H5.H5Gget_obj_info_all(gid, null, objNames, objTypes, lnkTypes, objTokens,
+                                                     HDF5Constants.H5_INDEX_NAME);
             }
             catch (Throwable err) {
                 err.printStackTrace();
                 fail("TestH5G.testH5Gget_obj_info_all_gid2: H5.H5Gget_obj_info_all: " + err);
             }
 
-            assertTrue("TestH5G.testH5Gget_obj_info_all_gid2: number found[" + names_found + "] different than expected["
-                    + objNames.length + "]", names_found == objNames.length);
+            assertTrue("TestH5G.testH5Gget_obj_info_all_gid2: number found[" + names_found +
+                           "] different than expected[" + objNames.length + "]",
+                       names_found == objNames.length);
             for (int i = 0; i < objNames.length; i++) {
-                assertNotNull("TestH5G.testH5Gget_obj_info_all_gid2: name #" + i + " does not exist", objNames[i]);
+                assertNotNull("TestH5G.testH5Gget_obj_info_all_gid2: name #" + i + " does not exist",
+                              objNames[i]);
                 assertTrue("TestH5G.testH5Gget_obj_info_all_gid2: ", objNames[i].length() > 0);
             }
         }
@@ -384,73 +436,91 @@ public class TestH5G {
             fail("TestH5G.testH5Gget_obj_info_all_gid2: H5.H5Gget_info: " + err);
         }
         finally {
-            try {H5.H5Gclose(gid);} catch (Exception ex) { }
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Gget_obj_info_max() {
-        long gid = _openGroup(H5fid, GROUPS[0]);
-        long groups_max_size = GROUPS.length + 1;
-        String objNames[] = new String[(int)groups_max_size];
-        int objTypes[] = new int[(int)groups_max_size];
-        int lnkTypes[] = new int[(int)groups_max_size];
+    public void testH5Gget_obj_info_max()
+    {
+        long gid                = _openGroup(H5fid, GROUPS[0]);
+        long groups_max_size    = GROUPS.length + 1;
+        String objNames[]       = new String[(int)groups_max_size];
+        int objTypes[]          = new int[(int)groups_max_size];
+        int lnkTypes[]          = new int[(int)groups_max_size];
         H5O_token_t objTokens[] = new H5O_token_t[(int)groups_max_size];
 
         int names_found = 0;
         try {
-            names_found = H5.H5Gget_obj_info_max(gid, objNames, objTypes, lnkTypes,
-                    objTokens, groups_max_size);
+            names_found =
+                H5.H5Gget_obj_info_max(gid, objNames, objTypes, lnkTypes, objTokens, groups_max_size);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5G.testH5Gget_obj_info_max: H5.H5Gget_obj_info_max: " + err);
         }
         finally {
-            try {H5.H5Gclose(gid);} catch (Exception ex) { }
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
 
         // expected number does not include root group
-        assertTrue("TestH5G.testH5Gget_obj_info_max: number found[" + names_found + "] different than expected["
-                + (GROUPS.length - 1) + "]", names_found == (GROUPS.length - 1));
-        for (int i = 0; i < GROUPS.length-1; i++) {
-            assertNotNull("TestH5G.testH5Gget_obj_info_max: name #"+i+" does not exist",objNames[i]);
-            assertTrue("TestH5G.testH5Gget_obj_info_max: ", objNames[i].length()>0);
+        assertTrue("TestH5G.testH5Gget_obj_info_max: number found[" + names_found +
+                       "] different than expected[" + (GROUPS.length - 1) + "]",
+                   names_found == (GROUPS.length - 1));
+        for (int i = 0; i < GROUPS.length - 1; i++) {
+            assertNotNull("TestH5G.testH5Gget_obj_info_max: name #" + i + " does not exist", objNames[i]);
+            assertTrue("TestH5G.testH5Gget_obj_info_max: ", objNames[i].length() > 0);
         }
     }
 
     @Test
-    public void testH5Gget_obj_info_max_limit() {
-        long gid = _openGroup(H5fid, GROUPS[0]);
-        long groups_max_size = GROUPS.length - 3;
-        String objNames[] = new String[(int)groups_max_size];
-        int objTypes[] = new int[(int)groups_max_size];
-        int lnkTypes[] = new int[(int)groups_max_size];
+    public void testH5Gget_obj_info_max_limit()
+    {
+        long gid                = _openGroup(H5fid, GROUPS[0]);
+        long groups_max_size    = GROUPS.length - 3;
+        String objNames[]       = new String[(int)groups_max_size];
+        int objTypes[]          = new int[(int)groups_max_size];
+        int lnkTypes[]          = new int[(int)groups_max_size];
         H5O_token_t objTokens[] = new H5O_token_t[(int)groups_max_size];
 
         int names_found = 0;
         try {
-            names_found = H5.H5Gget_obj_info_max(gid, objNames, objTypes, lnkTypes,
-                    objTokens, groups_max_size);
+            names_found =
+                H5.H5Gget_obj_info_max(gid, objNames, objTypes, lnkTypes, objTokens, groups_max_size);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5G.testH5Gget_obj_info_max_limit: H5.H5Gget_obj_info_max: " + err);
         }
         finally {
-            try {H5.H5Gclose(gid);} catch (Exception ex) { }
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
 
-        assertTrue("TestH5G.testH5Gget_obj_info_max_limit: number found[" + names_found + "] different than expected["
-                + groups_max_size + "]", names_found == groups_max_size);
+        assertTrue("TestH5G.testH5Gget_obj_info_max_limit: number found[" + names_found +
+                       "] different than expected[" + groups_max_size + "]",
+                   names_found == groups_max_size);
         for (int i = 0; i < objNames.length; i++) {
-            assertNotNull("TestH5G.testH5Gget_obj_info_max_limit: name #" + i + " does not exist", objNames[i]);
+            assertNotNull("TestH5G.testH5Gget_obj_info_max_limit: name #" + i + " does not exist",
+                          objNames[i]);
             assertTrue("TestH5G.testH5Gget_obj_info_max_limit: ", objNames[i].length() > 0);
         }
     }
 
     @Test
-    public void testH5Gget_obj_info_all_byIndexType() {
+    public void testH5Gget_obj_info_all_byIndexType()
+    {
         H5G_info_t info = null;
 
         long gid = _openGroup(H5fid2, GROUPS2[0]);
@@ -463,41 +533,44 @@ public class TestH5G {
             fail("TestH5G.testH5Gget_obj_info_all_byIndexType: H5.H5Gget_info: " + err);
         }
         finally {
-            try {H5.H5Gclose(gid);} catch (Exception ex) { }
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
         }
 
         assertNotNull("TestH5G.testH5Gget_obj_info_all_byIndexType: ", info);
         assertTrue("TestH5G.testH5Gget_obj_info_all_byIndexType: number of links is empty", info.nlinks > 0);
-        String objNames[] = new String[(int) info.nlinks];
-        int objTypes[] = new int[(int) info.nlinks];
-        int lnkTypes[] = new int[(int) info.nlinks];
-        H5O_token_t objTokens[] = new H5O_token_t[(int) info.nlinks];
+        String objNames[]       = new String[(int)info.nlinks];
+        int objTypes[]          = new int[(int)info.nlinks];
+        int lnkTypes[]          = new int[(int)info.nlinks];
+        H5O_token_t objTokens[] = new H5O_token_t[(int)info.nlinks];
 
         try {
-            H5.H5Gget_obj_info_all(H5fid2, GROUPS2[0], objNames,
-                    objTypes, lnkTypes, objTokens, HDF5Constants.H5_INDEX_CRT_ORDER);
+            H5.H5Gget_obj_info_all(H5fid2, GROUPS2[0], objNames, objTypes, lnkTypes, objTokens,
+                                   HDF5Constants.H5_INDEX_CRT_ORDER);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5G.testH5Gget_obj_info_all_byIndexType: H5.H5Gget_obj_info_all: " + err);
         }
 
-        assertEquals("G12",objNames[1]);
-        assertEquals("G13", objNames[2] );
-        assertEquals("G11", objNames[3] );
+        assertEquals("G12", objNames[1]);
+        assertEquals("G13", objNames[2]);
+        assertEquals("G11", objNames[3]);
 
         try {
-           H5.H5Gget_obj_info_all(H5fid2, GROUPS2[0], objNames,
-                    objTypes, lnkTypes, objTokens, HDF5Constants.H5_INDEX_NAME);
+            H5.H5Gget_obj_info_all(H5fid2, GROUPS2[0], objNames, objTypes, lnkTypes, objTokens,
+                                   HDF5Constants.H5_INDEX_NAME);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5G.testH5Gget_obj_info_all_byIndexType: H5.H5Gget_obj_info_all: " + err);
         }
 
-        assertEquals("G12",objNames[1]);
-        assertEquals("G13", objNames[2] );
-        assertEquals("G14", objNames[3] );
+        assertEquals("G12", objNames[1]);
+        assertEquals("G13", objNames[2]);
+        assertEquals("G14", objNames[3]);
     }
-
 }
diff --git a/java/test/TestH5Gbasic.java b/java/test/TestH5Gbasic.java
index 6e2e450..8ec04dd 100644
--- a/java/test/TestH5Gbasic.java
+++ b/java/test/TestH5Gbasic.java
@@ -30,15 +30,17 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Gbasic {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testGb.h5";
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
 
-    private final long _createGroup(long fid, String name) {
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -48,64 +50,81 @@ public class TestH5Gbasic {
         return gid;
     }
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void createH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
-        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT);
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
-    @Test//(expected = HDF5LibraryException.class)
-    public void testH5Gclose_invalid() throws Throwable {
+    @Test //(expected = HDF5LibraryException.class)
+    public void testH5Gclose_invalid() throws Throwable
+    {
         long gid = H5.H5Gclose(-1);
         assertTrue(gid == 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Gcreate_null() throws Throwable {
+    public void testH5Gcreate_null() throws Throwable
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
 
         // it should fail because the group name is null
-        gid = H5.H5Gcreate(H5fid, null, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        gid = H5.H5Gcreate(H5fid, null, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                           HDF5Constants.H5P_DEFAULT);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gcreate_invalid() throws Throwable {
-        H5.H5Gcreate(-1, "Invalid ID", HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Gcreate_invalid() throws Throwable
+    {
+        H5.H5Gcreate(-1, "Invalid ID", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                     HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Gcreate() {
+    public void testH5Gcreate()
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
-            gid = H5.H5Gcreate(H5fid, "/testH5Gcreate",
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
-                        HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gcreate(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -113,11 +132,16 @@ public class TestH5Gbasic {
         }
         assertTrue(gid > 0);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Gclose() {
+    public void testH5Gclose()
+    {
         long gid = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
 
@@ -130,24 +154,28 @@ public class TestH5Gbasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gcreate_exists() throws Throwable {
+    public void testH5Gcreate_exists() throws Throwable
+    {
         long gid = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
 
         // it should failed now because the group already exists in file
-        gid = H5.H5Gcreate(H5fid, "/testH5Gcreate",
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT);
+        gid = H5.H5Gcreate(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                           HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Gcreate_anon() {
+    public void testH5Gcreate_anon()
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
-            gid = H5.H5Gcreate_anon(H5fid, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gcreate_anon(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -155,42 +183,61 @@ public class TestH5Gbasic {
         }
         assertTrue(gid > 0);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Gopen_null() throws Throwable {
+    public void testH5Gopen_null() throws Throwable
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
 
         gid = H5.H5Gopen(H5fid, null, HDF5Constants.H5P_DEFAULT);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gopen_invalid() throws Throwable {
+    public void testH5Gopen_invalid() throws Throwable
+    {
         H5.H5Gopen(-1, "Invalid ID", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gopen_not_exists() throws Throwable {
+    public void testH5Gopen_not_exists() throws Throwable
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
 
-         gid = H5.H5Gopen(H5fid, "Never_created", HDF5Constants.H5P_DEFAULT);
+        gid = H5.H5Gopen(H5fid, "Never_created", HDF5Constants.H5P_DEFAULT);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Gopen() {
+    public void testH5Gopen()
+    {
         long gid = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
 
         try {
-            gid = H5.H5Gopen(H5fid, "/testH5Gcreate",
-                        HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gopen(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -198,16 +245,22 @@ public class TestH5Gbasic {
         }
         assertTrue(gid > 0);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gget_create_plist_invalid() throws Throwable {
+    public void testH5Gget_create_plist_invalid() throws Throwable
+    {
         H5.H5Gget_create_plist(-1);
     }
 
     @Test
-    public void testH5Gget_create_plist() {
+    public void testH5Gget_create_plist()
+    {
         long pid = HDF5Constants.H5I_INVALID_HID;
         long gid = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
@@ -216,126 +269,173 @@ public class TestH5Gbasic {
             pid = H5.H5Gget_create_plist(gid);
         }
         catch (Throwable err) {
-            try {H5.H5Gclose(gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
             err.printStackTrace();
             fail("H5.H5Gget_create_plist: " + err);
         }
         assertTrue(pid > 0);
 
-        try {H5.H5Pclose(pid);} catch (Exception ex) {}
+        try {
+            H5.H5Pclose(pid);
+        }
+        catch (Exception ex) {
+        }
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gget_info_invalid() throws Throwable {
+    public void testH5Gget_info_invalid() throws Throwable
+    {
         H5.H5Gget_info(-1);
     }
 
     @Test
-    public void testH5Gget_info() {
+    public void testH5Gget_info()
+    {
         H5G_info_t info = null;
-        long gid = _createGroup(H5fid, "/testH5Gcreate");
+        long gid        = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
 
         try {
             info = H5.H5Gget_info(gid);
         }
         catch (Throwable err) {
-            try {H5.H5Gclose(gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
             err.printStackTrace();
             fail("H5.H5Gget_info: " + err);
         }
         assertNotNull(info);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Gget_info_by_name_null() throws Throwable {
+    public void testH5Gget_info_by_name_null() throws Throwable
+    {
         H5.H5Gget_info_by_name(-1, null, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gget_info_by_name_invalid() throws Throwable {
+    public void testH5Gget_info_by_name_invalid() throws Throwable
+    {
         H5.H5Gget_info_by_name(-1, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gget_info_by_name_not_exists() throws Throwable {
-        H5.H5Gget_info_by_name(H5fid, "/testH5Gcreate",
-                HDF5Constants.H5P_DEFAULT);
+    public void testH5Gget_info_by_name_not_exists() throws Throwable
+    {
+        H5.H5Gget_info_by_name(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Gget_info_by_name() {
+    public void testH5Gget_info_by_name()
+    {
         H5G_info_t info = null;
-        long gid = _createGroup(H5fid, "/testH5Gcreate");
+        long gid        = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
 
         try {
-            info = H5.H5Gget_info_by_name(gid, "/testH5Gcreate",
-                    HDF5Constants.H5P_DEFAULT);
+            info = H5.H5Gget_info_by_name(gid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            try {H5.H5Gclose(gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
             err.printStackTrace();
             fail("H5.H5Gget_info_by_name: " + err);
         }
         assertNotNull(info);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Gget_info_by_name_fileid() {
+    public void testH5Gget_info_by_name_fileid()
+    {
         H5G_info_t info = null;
-        long gid = _createGroup(H5fid, "/testH5Gcreate");
+        long gid        = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
 
         try {
-            info = H5.H5Gget_info_by_name(H5fid, "/testH5Gcreate",
-                    HDF5Constants.H5P_DEFAULT);
+            info = H5.H5Gget_info_by_name(H5fid, "/testH5Gcreate", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
-            try {H5.H5Gclose(gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(gid);
+            }
+            catch (Exception ex) {
+            }
             err.printStackTrace();
             fail("H5.H5Gget_info_by_name: " + err);
         }
         assertNotNull(info);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Gget_info_by_idx_null() throws Throwable {
-        H5.H5Gget_info_by_idx(-1, null, HDF5Constants.H5_INDEX_NAME,
-                HDF5Constants.H5_ITER_INC, 1L, HDF5Constants.H5P_DEFAULT);
+    public void testH5Gget_info_by_idx_null() throws Throwable
+    {
+        H5.H5Gget_info_by_idx(-1, null, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 1L,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gget_info_by_idx_invalid() throws Throwable {
-        H5.H5Gget_info_by_idx(-1, "/testH5Gcreate", HDF5Constants.H5_INDEX_NAME,
-                HDF5Constants.H5_ITER_INC, 1L, HDF5Constants.H5P_DEFAULT);
+    public void testH5Gget_info_by_idx_invalid() throws Throwable
+    {
+        H5.H5Gget_info_by_idx(-1, "/testH5Gcreate", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC,
+                              1L, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gget_info_by_idx_not_exists() throws Throwable {
-        H5.H5Gget_info_by_idx(H5fid, "/testH5Gcreate",
-                HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 1L,
-                HDF5Constants.H5P_DEFAULT);
+    public void testH5Gget_info_by_idx_not_exists() throws Throwable
+    {
+        H5.H5Gget_info_by_idx(H5fid, "/testH5Gcreate", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC,
+                              1L, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Gget_info_by_idx() {
+    public void testH5Gget_info_by_idx()
+    {
         H5G_info_t info = null;
-        long gid = _createGroup(H5fid, "/testH5Gcreate");
+        long gid        = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
 
         try {
-            info = H5.H5Gget_info_by_idx(gid, "/", HDF5Constants.H5_INDEX_NAME,
-                    HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            info = H5.H5Gget_info_by_idx(gid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                                         HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -343,20 +443,28 @@ public class TestH5Gbasic {
         }
         assertNotNull(info);
 
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Gget_info_by_idx_fileid() {
+    public void testH5Gget_info_by_idx_fileid()
+    {
         H5G_info_t info = null;
-        long gid = _createGroup(H5fid, "/testH5Gcreate");
+        long gid        = _createGroup(H5fid, "/testH5Gcreate");
         assertTrue(gid > 0);
-        try {H5.H5Gclose(gid);} catch (Exception ex) {}
+        try {
+            H5.H5Gclose(gid);
+        }
+        catch (Exception ex) {
+        }
 
         try {
-            info = H5.H5Gget_info_by_idx(H5fid, "/",
-                    HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
-                    HDF5Constants.H5P_DEFAULT);
+            info = H5.H5Gget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC,
+                                         0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -366,13 +474,14 @@ public class TestH5Gbasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Gflush_invalid() throws Throwable {
+    public void testH5Gflush_invalid() throws Throwable
+    {
         H5.H5Gflush(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Grefresh_invalid() throws Throwable {
+    public void testH5Grefresh_invalid() throws Throwable
+    {
         H5.H5Grefresh(-1);
     }
-
 }
diff --git a/java/test/TestH5Giterate.java b/java/test/TestH5Giterate.java
index 388d2ac..eb4b5bf 100644
--- a/java/test/TestH5Giterate.java
+++ b/java/test/TestH5Giterate.java
@@ -15,6 +15,7 @@ package test;
 import static org.junit.Assert.assertNotNull;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
@@ -28,11 +29,13 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Giterate {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "h5ex_g_iterate.hdf";
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
 
-    private final long _openGroup(long fid, String name) {
+    private final long _openGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
             gid = H5.H5Gopen(fid, name, HDF5Constants.H5P_DEFAULT);
@@ -47,14 +50,13 @@ public class TestH5Giterate {
     }
 
     @Before
-    public void openH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void openH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY,
-                HDF5Constants.H5P_DEFAULT);
+            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -63,15 +65,21 @@ public class TestH5Giterate {
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
         System.out.println();
     }
 
     @Test
-    public void testH5Gget_obj_info_all() {
+    public void testH5Gget_obj_info_all()
+    {
         H5G_info_t info = null;
 
         long gid = _openGroup(H5fid, "/");
@@ -90,45 +98,46 @@ public class TestH5Giterate {
         }
         assertNotNull(info);
         assertTrue("number of links is empty", info.nlinks > 0);
-        String objNames[] = new String[(int) info.nlinks];
-        int objTypes[] = new int[(int) info.nlinks];
-        int lnkTypes[] = new int[(int) info.nlinks];
-        H5O_token_t objTokens[] = new H5O_token_t[(int) info.nlinks];
+        String objNames[]       = new String[(int)info.nlinks];
+        int objTypes[]          = new int[(int)info.nlinks];
+        int lnkTypes[]          = new int[(int)info.nlinks];
+        H5O_token_t objTokens[] = new H5O_token_t[(int)info.nlinks];
 
         int names_found = 0;
         try {
-            names_found = H5.H5Gget_obj_info_all(H5fid, "/", objNames,
-                    objTypes, lnkTypes, objTokens, HDF5Constants.H5_INDEX_NAME);
+            names_found = H5.H5Gget_obj_info_all(H5fid, "/", objNames, objTypes, lnkTypes, objTokens,
+                                                 HDF5Constants.H5_INDEX_NAME);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gget_obj_info_all: " + err);
         }
 
-        assertTrue("number found[" + names_found + "] different than expected["
-                + objNames.length + "]", names_found == objNames.length);
+        assertTrue("number found[" + names_found + "] different than expected[" + objNames.length + "]",
+                   names_found == objNames.length);
         for (int i = 0; i < objNames.length; i++) {
             assertNotNull("name #" + i + " does not exist", objNames[i]);
             assertTrue(objNames[i].length() > 0);
-            if (objTypes[i]==HDF5Constants.H5O_TYPE_GROUP) {
-                assertTrue("Group is index: "+i + " ",i==2);
-                assertTrue("Group is : "+objNames[i] + " ",objNames[i].compareToIgnoreCase("G1")==0);
+            if (objTypes[i] == HDF5Constants.H5O_TYPE_GROUP) {
+                assertTrue("Group is index: " + i + " ", i == 2);
+                assertTrue("Group is : " + objNames[i] + " ", objNames[i].compareToIgnoreCase("G1") == 0);
             }
-            else if (objTypes[i]==HDF5Constants.H5O_TYPE_DATASET) {
-                assertTrue("Dataset is index: "+i + " ",(i==0)||(i==3));
-                if(i==0)
-                    assertTrue("Dataset is : "+objNames[i] + " ",objNames[i].compareToIgnoreCase("DS1")==0);
+            else if (objTypes[i] == HDF5Constants.H5O_TYPE_DATASET) {
+                assertTrue("Dataset is index: " + i + " ", (i == 0) || (i == 3));
+                if (i == 0)
+                    assertTrue("Dataset is : " + objNames[i] + " ",
+                               objNames[i].compareToIgnoreCase("DS1") == 0);
                 else
-                    assertTrue("Dataset is : "+objNames[i] + " ",objNames[i].compareToIgnoreCase("L1")==0);
+                    assertTrue("Dataset is : " + objNames[i] + " ",
+                               objNames[i].compareToIgnoreCase("L1") == 0);
             }
-            else if (objTypes[i]==HDF5Constants.H5O_TYPE_NAMED_DATATYPE) {
-                assertTrue("Datatype is index: "+i + " ",i==1);
-                assertTrue("Datatype is : "+objNames[i] + " ",objNames[i].compareToIgnoreCase("DT1")==0);
+            else if (objTypes[i] == HDF5Constants.H5O_TYPE_NAMED_DATATYPE) {
+                assertTrue("Datatype is index: " + i + " ", i == 1);
+                assertTrue("Datatype is : " + objNames[i] + " ", objNames[i].compareToIgnoreCase("DT1") == 0);
             }
             else {
                 fail("  Unknown at index: " + i + " " + objNames[i]);
             }
         }
     }
-
 }
diff --git a/java/test/TestH5Lbasic.java b/java/test/TestH5Lbasic.java
index a28fc3d..c81545b 100644
--- a/java/test/TestH5Lbasic.java
+++ b/java/test/TestH5Lbasic.java
@@ -20,8 +20,8 @@ import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
-import hdf.hdf5lib.callbacks.H5L_iterate_t;
 import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t;
+import hdf.hdf5lib.callbacks.H5L_iterate_t;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.structs.H5L_info_t;
 
@@ -32,19 +32,19 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Lbasic {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "h5ex_g_iterateL1.hdf";
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
 
     @Before
-    public void openH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void openH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY,
-                HDF5Constants.H5P_DEFAULT);
+            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -53,15 +53,21 @@ public class TestH5Lbasic {
     }
 
     @After
-    public void closeH5file() throws HDF5LibraryException {
+    public void closeH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
         System.out.println();
     }
 
     @Test
-    public void testH5Lexists() {
+    public void testH5Lexists()
+    {
         boolean link_exists = false;
         try {
             link_exists = H5.H5Lexists(H5fid, "None", HDF5Constants.H5P_DEFAULT);
@@ -70,7 +76,7 @@ public class TestH5Lbasic {
             err.printStackTrace();
             fail("H5.H5Lexists: " + err);
         }
-        assertFalse("H5Lexists ",link_exists);
+        assertFalse("H5Lexists ", link_exists);
         try {
             link_exists = H5.H5Lexists(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
         }
@@ -78,7 +84,7 @@ public class TestH5Lbasic {
             err.printStackTrace();
             fail("H5.H5Lexists: " + err);
         }
-        assertTrue("H5Lexists ",link_exists);
+        assertTrue("H5Lexists ", link_exists);
         try {
             link_exists = H5.H5Lexists(H5fid, "G1/DS2", HDF5Constants.H5P_DEFAULT);
         }
@@ -86,16 +92,18 @@ public class TestH5Lbasic {
             err.printStackTrace();
             fail("H5.H5Lexists: " + err);
         }
-        assertTrue("H5Lexists ",link_exists);
+        assertTrue("H5Lexists ", link_exists);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_not_exist() throws Throwable {
+    public void testH5Lget_info_not_exist() throws Throwable
+    {
         H5.H5Lget_info(H5fid, "None", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lget_info_dataset() {
+    public void testH5Lget_info_dataset()
+    {
         H5L_info_t link_info = null;
         try {
             link_info = H5.H5Lget_info(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
@@ -104,12 +112,13 @@ public class TestH5Lbasic {
             err.printStackTrace();
             fail("H5.H5Lget_info: " + err);
         }
-        assertFalse("H5Lget_info ",link_info==null);
-        assertTrue("H5Lget_info link type",link_info.type==HDF5Constants.H5L_TYPE_HARD);
+        assertFalse("H5Lget_info ", link_info == null);
+        assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_HARD);
     }
 
     @Test
-    public void testH5Lget_info_hardlink() {
+    public void testH5Lget_info_hardlink()
+    {
         H5L_info_t link_info = null;
         try {
             link_info = H5.H5Lget_info(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
@@ -118,43 +127,53 @@ public class TestH5Lbasic {
             err.printStackTrace();
             fail("H5.H5Lget_info: " + err);
         }
-        assertFalse("H5Lget_info",link_info==null);
-        assertTrue("H5Lget_info link type",link_info.type==HDF5Constants.H5L_TYPE_HARD);
+        assertFalse("H5Lget_info", link_info == null);
+        assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_HARD);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_by_idx_name_not_exist_name() throws Throwable {
-        H5.H5Lget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_info_by_idx_name_not_exist_name() throws Throwable
+    {
+        H5.H5Lget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_by_idx_name_not_exist_create() throws Throwable {
-        H5.H5Lget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_info_by_idx_name_not_exist_create() throws Throwable
+    {
+        H5.H5Lget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_by_idx_not_exist_name() throws Throwable {
-        H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_info_by_idx_not_exist_name() throws Throwable
+    {
+        H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_by_idx_not_exist_create() throws Throwable {
-        H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_info_by_idx_not_exist_create() throws Throwable
+    {
+        H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lget_info_by_idx_n0() {
-        H5L_info_t link_info = null;
+    public void testH5Lget_info_by_idx_n0()
+    {
+        H5L_info_t link_info  = null;
         H5L_info_t link_info2 = null;
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("H5Lget_info_by_idx",link_info==null);
-        assertTrue("H5Lget_info_by_idx link type",link_info.type==HDF5Constants.H5L_TYPE_HARD);
+        assertFalse("H5Lget_info_by_idx", link_info == null);
+        assertTrue("H5Lget_info_by_idx link type", link_info.type == HDF5Constants.H5L_TYPE_HARD);
         try {
             link_info2 = H5.H5Lget_info(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
         }
@@ -166,18 +185,20 @@ public class TestH5Lbasic {
     }
 
     @Test
-    public void testH5Lget_info_by_idx_n3() {
-        H5L_info_t link_info = null;
+    public void testH5Lget_info_by_idx_n3()
+    {
+        H5L_info_t link_info  = null;
         H5L_info_t link_info2 = null;
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("H5Lget_info_by_idx",link_info==null);
-        assertTrue("H5Lget_info_by_idx link type",link_info.type==HDF5Constants.H5L_TYPE_HARD);
+        assertFalse("H5Lget_info_by_idx", link_info == null);
+        assertTrue("H5Lget_info_by_idx link type", link_info.type == HDF5Constants.H5L_TYPE_HARD);
         try {
             link_info2 = H5.H5Lget_info(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
         }
@@ -189,44 +210,52 @@ public class TestH5Lbasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_name_by_idx_not_exist() throws Throwable {
-        H5.H5Lget_name_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_name_by_idx_not_exist() throws Throwable
+    {
+        H5.H5Lget_name_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lget_name_by_idx_n0() {
+    public void testH5Lget_name_by_idx_n0()
+    {
         String link_name = null;
         try {
-            link_name = H5.H5Lget_name_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            link_name = H5.H5Lget_name_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_name_by_idx: " + err);
         }
-        assertFalse("H5Lget_name_by_idx ",link_name==null);
-        assertTrue("Link Name ",link_name.compareTo("DS1")==0);
+        assertFalse("H5Lget_name_by_idx ", link_name == null);
+        assertTrue("Link Name ", link_name.compareTo("DS1") == 0);
     }
 
     @Test
-    public void testH5Lget_name_by_idx_n3() {
+    public void testH5Lget_name_by_idx_n3()
+    {
         String link_name = null;
         try {
-            link_name = H5.H5Lget_name_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
+            link_name = H5.H5Lget_name_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_name_by_idx: " + err);
         }
-        assertFalse("H5Lget_name_by_idx ",link_name==null);
-        assertTrue("Link Name ",link_name.compareTo("L1")==0);
+        assertFalse("H5Lget_name_by_idx ", link_name == null);
+        assertTrue("Link Name ", link_name.compareTo("L1") == 0);
     }
 
     @Test
-    public void testH5Lvisit() {
+    public void testH5Lvisit()
+    {
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -236,7 +265,8 @@ public class TestH5Lbasic {
         }
         H5L_iterate_opdata_t iter_data = new H5L_iter_data();
         class H5L_iter_callback implements H5L_iterate_t {
-            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5L_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -250,21 +280,29 @@ public class TestH5Lbasic {
             err.printStackTrace();
             fail("H5.H5Lvisit: " + err);
         }
-        assertFalse("H5Lvisit ",((H5L_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Lvisit "+((H5L_iter_data)iter_data).iterdata.size(),((H5L_iter_data)iter_data).iterdata.size()==5);
-        assertTrue("H5Lvisit "+(((H5L_iter_data)iter_data).iterdata.get(0)).link_name,(((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1")==0);
-        assertTrue("H5Lvisit "+(((H5L_iter_data)iter_data).iterdata.get(1)).link_name,(((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DT1")==0);
-        assertTrue("H5Lvisit "+(((H5L_iter_data)iter_data).iterdata.get(2)).link_name,(((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1")==0);
-        assertTrue("H5Lvisit "+(((H5L_iter_data)iter_data).iterdata.get(3)).link_name,(((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1/DS2")==0);
-        assertTrue("H5Lvisit "+(((H5L_iter_data)iter_data).iterdata.get(4)).link_name,(((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("L1")==0);
+        assertFalse("H5Lvisit ", ((H5L_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Lvisit " + ((H5L_iter_data)iter_data).iterdata.size(),
+                   ((H5L_iter_data)iter_data).iterdata.size() == 5);
+        assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(0)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1") == 0);
+        assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(1)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DT1") == 0);
+        assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(2)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1") == 0);
+        assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(3)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1/DS2") == 0);
+        assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(4)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("L1") == 0);
     }
 
     @Test
-    public void testH5Lvisit_by_name() {
+    public void testH5Lvisit_by_name()
+    {
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -274,7 +312,8 @@ public class TestH5Lbasic {
         }
         H5L_iterate_opdata_t iter_data = new H5L_iter_data();
         class H5L_iter_callback implements H5L_iterate_t {
-            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5L_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -282,23 +321,28 @@ public class TestH5Lbasic {
         }
         H5L_iterate_t iter_cb = new H5L_iter_callback();
         try {
-            H5.H5Lvisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT);
+            H5.H5Lvisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb,
+                                iter_data, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lvisit_by_name: " + err);
         }
-        assertFalse("H5Lvisit_by_name ",((H5L_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Lvisit_by_name "+((H5L_iter_data)iter_data).iterdata.size(),((H5L_iter_data)iter_data).iterdata.size()==1);
-        assertTrue("H5Lvisit_by_name "+(((H5L_iter_data)iter_data).iterdata.get(0)).link_name,(((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS2")==0);
+        assertFalse("H5Lvisit_by_name ", ((H5L_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Lvisit_by_name " + ((H5L_iter_data)iter_data).iterdata.size(),
+                   ((H5L_iter_data)iter_data).iterdata.size() == 1);
+        assertTrue("H5Lvisit_by_name " + (((H5L_iter_data)iter_data).iterdata.get(0)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS2") == 0);
     }
 
     @Test
-    public void testH5Literate() {
+    public void testH5Literate()
+    {
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -308,7 +352,8 @@ public class TestH5Lbasic {
         }
         H5L_iterate_opdata_t iter_data = new H5L_iter_data();
         class H5L_iter_callback implements H5L_iterate_t {
-            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5L_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -316,26 +361,35 @@ public class TestH5Lbasic {
         }
         H5L_iterate_t iter_cb = new H5L_iter_callback();
         try {
-            H5.H5Literate(H5fid, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L, iter_cb, iter_data);
+            H5.H5Literate(H5fid, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L, iter_cb,
+                          iter_data);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Literate: " + err);
         }
-        assertFalse("H5Literate ",((H5L_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Literate "+((H5L_iter_data)iter_data).iterdata.size(),((H5L_iter_data)iter_data).iterdata.size()==4);
-        assertTrue("H5Literate "+(((H5L_iter_data)iter_data).iterdata.get(0)).link_name,(((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1")==0);
-        assertTrue("H5Literate "+(((H5L_iter_data)iter_data).iterdata.get(1)).link_name,(((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DT1")==0);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name,(((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1")==0);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("L1")==0);
+        assertFalse("H5Literate ", ((H5L_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Literate " + ((H5L_iter_data)iter_data).iterdata.size(),
+                   ((H5L_iter_data)iter_data).iterdata.size() == 4);
+        assertTrue("H5Literate " + (((H5L_iter_data)iter_data).iterdata.get(0)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1") == 0);
+        assertTrue("H5Literate " + (((H5L_iter_data)iter_data).iterdata.get(1)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DT1") == 0);
+        assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name,
+                   (((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1") == 0);
+        assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("L1") ==
+                       0);
     }
 
     @Test
-    public void testH5Literate_by_name() {
+    public void testH5Literate_by_name()
+    {
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -345,7 +399,8 @@ public class TestH5Lbasic {
         }
         H5L_iterate_opdata_t iter_data = new H5L_iter_data();
         class H5L_iter_callback implements H5L_iterate_t {
-            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5L_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -353,15 +408,18 @@ public class TestH5Lbasic {
         }
         H5L_iterate_t iter_cb = new H5L_iter_callback();
         try {
-            H5.H5Literate_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT);
+            H5.H5Literate_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L,
+                                  iter_cb, iter_data, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Literate_by_name: " + err);
         }
-        assertFalse("H5Literate_by_name ",((H5L_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Literate_by_name "+((H5L_iter_data)iter_data).iterdata.size(),((H5L_iter_data)iter_data).iterdata.size()==1);
-        assertTrue("H5Literate_by_name "+((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS2")==0);
+        assertFalse("H5Literate_by_name ", ((H5L_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Literate_by_name " + ((H5L_iter_data)iter_data).iterdata.size(),
+                   ((H5L_iter_data)iter_data).iterdata.size() == 1);
+        assertTrue("H5Literate_by_name " + ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS2") ==
+                       0);
     }
-
 }
diff --git a/java/test/TestH5Lcreate.java b/java/test/TestH5Lcreate.java
index 44af2e5..822323e 100644
--- a/java/test/TestH5Lcreate.java
+++ b/java/test/TestH5Lcreate.java
@@ -21,8 +21,8 @@ import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
-import hdf.hdf5lib.callbacks.H5L_iterate_t;
 import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t;
+import hdf.hdf5lib.callbacks.H5L_iterate_t;
 import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.structs.H5L_info_t;
@@ -35,21 +35,23 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Lcreate {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname               = new TestName();
     private static final String H5_EXTFILE = "h5ex_g_iterateL2.hdf";
-    private static final String H5_FILE = "testL.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long H5fcpl = HDF5Constants.H5I_INVALID_HID;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did1 = HDF5Constants.H5I_INVALID_HID;
-    long H5did2 = HDF5Constants.H5I_INVALID_HID;
-    long H5gcpl = HDF5Constants.H5I_INVALID_HID;
-    long H5gid = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-
-    private final void _deleteFile(String filename) {
+    private static final String H5_FILE    = "testL.h5";
+    private static final int DIM_X         = 4;
+    private static final int DIM_Y         = 6;
+    long H5fcpl                            = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                             = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                            = HDF5Constants.H5I_INVALID_HID;
+    long H5did1                            = HDF5Constants.H5I_INVALID_HID;
+    long H5did2                            = HDF5Constants.H5I_INVALID_HID;
+    long H5gcpl                            = HDF5Constants.H5I_INVALID_HID;
+    long H5gid                             = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                          = {DIM_X, DIM_Y};
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
@@ -62,39 +64,41 @@ public class TestH5Lcreate {
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Dcreate: " + err);
         }
-        assertTrue("TestH5L._createDataset: ",did > 0);
+        assertTrue("TestH5L._createDataset: ", did > 0);
 
         return did;
     }
 
-    private final long _createGroup(long fid, String name) {
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5gcpl = HDF5Constants.H5P_DEFAULT;
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                    H5gcpl, HDF5Constants.H5P_DEFAULT);
+            gid    = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, H5gcpl, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gcreate: " + err);
         }
-        assertTrue("TestH5L._createGroup: ",gid > 0);
+        assertTrue("TestH5L._createGroup: ", gid > 0);
 
         return gid;
     }
 
-    private final void _createHardLink(long fid, long cid, String curname, long did, String dstname, long lcpl, long lapl) {
+    private final void _createHardLink(long fid, long cid, String curname, long did, String dstname,
+                                       long lcpl, long lapl)
+    {
         boolean link_exists = false;
         try {
             H5.H5Lcreate_hard(cid, curname, did, dstname, lcpl, lapl);
@@ -108,7 +112,9 @@ public class TestH5Lcreate {
         assertTrue("TestH5L._createHardLink ", link_exists);
     }
 
-    private final void _createSoftLink(long fid, String curname, long did, String dstname, long lcpl, long lapl) {
+    private final void _createSoftLink(long fid, String curname, long did, String dstname, long lcpl,
+                                       long lapl)
+    {
         boolean link_exists = false;
         try {
             H5.H5Lcreate_soft(curname, did, dstname, lcpl, lapl);
@@ -122,7 +128,9 @@ public class TestH5Lcreate {
         assertTrue("TestH5L._createSoftLink ", link_exists);
     }
 
-    private final void _createExternalLink(long fid, String ext_filename, String curname, long did, String dstname, long lcpl, long lapl) {
+    private final void _createExternalLink(long fid, String ext_filename, String curname, long did,
+                                           String dstname, long lcpl, long lapl)
+    {
         boolean link_exists = false;
         try {
             H5.H5Lcreate_external(ext_filename, curname, did, dstname, lcpl, lapl);
@@ -137,111 +145,149 @@ public class TestH5Lcreate {
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         try {
             H5fcpl = H5.H5Pcreate(HDF5Constants.H5P_FILE_CREATE);
-            H5.H5Pset_link_creation_order(H5fcpl, HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    H5fcpl, HDF5Constants.H5P_DEFAULT);
+            H5.H5Pset_link_creation_order(H5fcpl, HDF5Constants.H5P_CRT_ORDER_TRACKED +
+                                                      HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, H5fcpl, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5L.createH5file: " + err);
         }
-        assertTrue("TestH5L.createH5file: H5.H5Fcreate: ",H5fid > 0);
+        assertTrue("TestH5L.createH5file: H5.H5Fcreate: ", H5fid > 0);
         try {
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
             H5did1 = _createDataset(H5fid, H5dsid, "DS1", HDF5Constants.H5P_DEFAULT);
-            H5gid = _createGroup(H5fid, "/G1");
+            H5gid  = _createGroup(H5fid, "/G1");
             H5did2 = _createDataset(H5gid, H5dsid, "DS2", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5L.createH5objs: " + err);
         }
-        assertTrue("TestH5L.createH5file: H5.H5Screate_simple: ",H5dsid > 0);
-        assertTrue("TestH5L.createH5file: H5.H5Gcreate: ",H5gid > 0);
+        assertTrue("TestH5L.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
+        assertTrue("TestH5L.createH5file: H5.H5Gcreate: ", H5gid > 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5gid > 0)
-            try {H5.H5Gclose(H5gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(H5gid);
+            }
+            catch (Exception ex) {
+            }
         if (H5gcpl > 0)
-            try {H5.H5Pclose(H5gcpl);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5gcpl);
+            }
+            catch (Exception ex) {
+            }
         if (H5did2 > 0)
-            try {H5.H5Dclose(H5did2);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did2);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did1 > 0)
-            try {H5.H5Dclose(H5did1);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did1);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fcpl > 0)
-            try {H5.H5Pclose(H5fcpl);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5fcpl);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
     @Test
-    public void testH5Lget_info_by_idx_n0_create() {
+    public void testH5Lget_info_by_idx_n0_create()
+    {
         H5L_info_t link_info = null;
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx_n0_create:H5Pget_link_creation_order " + err);
         }
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("H5Lget_info_by_idx ", link_info==null);
-        assertTrue("H5Lget_info_by_idx link type", link_info.type==HDF5Constants.H5L_TYPE_HARD);
+        assertFalse("H5Lget_info_by_idx ", link_info == null);
+        assertTrue("H5Lget_info_by_idx link type", link_info.type == HDF5Constants.H5L_TYPE_HARD);
     }
 
     @Test
-    public void testH5Lget_info_by_idx_n1_create() {
+    public void testH5Lget_info_by_idx_n1_create()
+    {
         H5L_info_t link_info = null;
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx_n1_create:H5Pget_link_creation_order " + err);
         }
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("H5Lget_info_by_idx ", link_info==null);
-        assertTrue("H5Lget_info_by_idx link type", link_info.type==HDF5Constants.H5L_TYPE_HARD);
+        assertFalse("H5Lget_info_by_idx ", link_info == null);
+        assertTrue("H5Lget_info_by_idx link type", link_info.type == HDF5Constants.H5L_TYPE_HARD);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcreate_hard_cur_not_exists() throws Throwable {
+    public void testH5Lcreate_hard_cur_not_exists() throws Throwable
+    {
         H5.H5Lcreate_hard(H5fid, "None", H5fid, "DS1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lcreate_hard() {
+    public void testH5Lcreate_hard()
+    {
         try {
-            H5.H5Lcreate_hard(H5fid, "DS1", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5.H5Lcreate_hard(H5fid, "DS1", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                              HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
             boolean link_exists = H5.H5Lexists(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5Lcreate_hard:H5Lexists ", link_exists);
@@ -253,14 +299,19 @@ public class TestH5Lcreate {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcreate_hard_dst_link_exists() throws Throwable {
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-        H5.H5Lcreate_hard(H5fid, "L1", H5fid, "/G1/DS2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lcreate_hard_dst_link_exists() throws Throwable
+    {
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
+        H5.H5Lcreate_hard(H5fid, "L1", H5fid, "/G1/DS2", HDF5Constants.H5P_DEFAULT,
+                          HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Ldelete_hard_link() {
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Ldelete_hard_link()
+    {
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
         try {
             H5.H5Ldelete(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -274,7 +325,8 @@ public class TestH5Lcreate {
     }
 
     @Test
-    public void testH5Lcreate_soft() {
+    public void testH5Lcreate_soft()
+    {
         try {
             H5.H5Lcreate_soft("DS1", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -288,13 +340,15 @@ public class TestH5Lcreate {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcreate_soft_dst_link_exists() throws Throwable {
+    public void testH5Lcreate_soft_dst_link_exists() throws Throwable
+    {
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         H5.H5Lcreate_soft("L1", H5fid, "/G1/DS2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Ldelete_soft_link() {
+    public void testH5Ldelete_soft_link()
+    {
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
             H5.H5Ldelete(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
@@ -309,7 +363,8 @@ public class TestH5Lcreate {
     }
 
     @Test
-    public void testH5Lget_info_softlink() {
+    public void testH5Lget_info_softlink()
+    {
         H5L_info_t link_info = null;
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
@@ -319,15 +374,16 @@ public class TestH5Lcreate {
             err.printStackTrace();
             fail("H5.H5Lget_info: " + err);
         }
-        assertFalse("H5Lget_info", link_info==null);
-        assertTrue("H5Lget_info link type", link_info.type==HDF5Constants.H5L_TYPE_SOFT);
+        assertFalse("H5Lget_info", link_info == null);
+        assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_SOFT);
         assertTrue("Link Value Size", link_info.val_size > 0);
     }
 
     @Test
-    public void testH5Lget_value_soft() {
+    public void testH5Lget_value_soft()
+    {
         String[] link_value = {null, null};
-        int link_type = -1;
+        int link_type       = -1;
 
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
@@ -338,12 +394,13 @@ public class TestH5Lcreate {
             fail("H5.H5Lget_value: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_SOFT);
-        assertFalse("H5Lget_value ", link_value[0]==null);
-        assertTrue("Link Value ", link_value[0].compareTo("/G1/DS2")==0);
+        assertFalse("H5Lget_value ", link_value[0] == null);
+        assertTrue("Link Value ", link_value[0].compareTo("/G1/DS2") == 0);
     }
 
     @Test
-    public void testH5Lcreate_soft_dangle() {
+    public void testH5Lcreate_soft_dangle()
+    {
         try {
             H5.H5Lcreate_soft("DS3", H5fid, "L2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -357,7 +414,8 @@ public class TestH5Lcreate {
     }
 
     @Test
-    public void testH5Ldelete_soft_link_dangle() {
+    public void testH5Ldelete_soft_link_dangle()
+    {
         _createSoftLink(H5fid, "DS3", H5fid, "L2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
             H5.H5Ldelete(H5fid, "L2", HDF5Constants.H5P_DEFAULT);
@@ -372,7 +430,8 @@ public class TestH5Lcreate {
     }
 
     @Test
-    public void testH5Lget_info_softlink_dangle() {
+    public void testH5Lget_info_softlink_dangle()
+    {
         H5L_info_t link_info = null;
         _createSoftLink(H5fid, "DS3", H5fid, "L2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
@@ -382,15 +441,16 @@ public class TestH5Lcreate {
             err.printStackTrace();
             fail("H5.H5Lget_info: " + err);
         }
-        assertFalse("H5Lget_info", link_info==null);
-        assertTrue("H5Lget_info link type", link_info.type==HDF5Constants.H5L_TYPE_SOFT);
+        assertFalse("H5Lget_info", link_info == null);
+        assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_SOFT);
         assertTrue("Link Value Size", link_info.val_size > 0);
     }
 
     @Test
-    public void testH5Lget_value_dangle() {
-        String[] link_value = {null,null};
-        int link_type = -1;
+    public void testH5Lget_value_dangle()
+    {
+        String[] link_value = {null, null};
+        int link_type       = -1;
 
         _createSoftLink(H5fid, "DS3", H5fid, "L2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
@@ -401,14 +461,16 @@ public class TestH5Lcreate {
             fail("H5.H5Lget_value: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_SOFT);
-        assertFalse("H5Lget_value ", link_value[0]==null);
-        assertTrue("Link Value ", link_value[0].compareTo("DS3")==0);
+        assertFalse("H5Lget_value ", link_value[0] == null);
+        assertTrue("Link Value ", link_value[0].compareTo("DS3") == 0);
     }
 
     @Test
-    public void testH5Lcreate_external() {
+    public void testH5Lcreate_external()
+    {
         try {
-            H5.H5Lcreate_external(H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5.H5Lcreate_external(H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                                  HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
             boolean link_exists = H5.H5Lexists(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5Lcreate_external:H5Lexists ", link_exists);
@@ -420,9 +482,11 @@ public class TestH5Lcreate {
     }
 
     @Test
-    public void testH5Lget_info_externallink() {
+    public void testH5Lget_info_externallink()
+    {
         H5L_info_t link_info = null;
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         try {
             link_info = H5.H5Lget_info(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
         }
@@ -430,17 +494,19 @@ public class TestH5Lcreate {
             err.printStackTrace();
             fail("H5.H5Lget_info: " + err);
         }
-        assertFalse("H5Lget_info", link_info==null);
-        assertTrue("H5Lget_info link type", link_info.type==HDF5Constants.H5L_TYPE_EXTERNAL);
+        assertFalse("H5Lget_info", link_info == null);
+        assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_EXTERNAL);
         assertTrue("Link Value Size", link_info.val_size > 0);
     }
 
     @Test
-    public void testH5Lget_value_external(){
-        String[] link_value = {null,null};
-        int link_type = -1;
+    public void testH5Lget_value_external()
+    {
+        String[] link_value = {null, null};
+        int link_type       = -1;
 
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         try {
             link_type = H5.H5Lget_value(H5fid, "L1", link_value, HDF5Constants.H5P_DEFAULT);
         }
@@ -449,18 +515,20 @@ public class TestH5Lcreate {
             fail("H5.H5Lget_value: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_EXTERNAL);
-        assertFalse("H5Lget_value ", link_value[0]==null);
-        assertFalse("H5Lget_value ", link_value[1]==null);
-        assertTrue("Link Value ", link_value[0].compareTo("DT1")==0);
+        assertFalse("H5Lget_value ", link_value[0] == null);
+        assertFalse("H5Lget_value ", link_value[1] == null);
+        assertTrue("Link Value ", link_value[0].compareTo("DT1") == 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcopy_cur_not_exists() throws Throwable {
+    public void testH5Lcopy_cur_not_exists() throws Throwable
+    {
         H5.H5Lcopy(H5fid, "None", H5fid, "DS1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lcopy() {
+    public void testH5Lcopy()
+    {
         try {
             H5.H5Lcopy(H5fid, "DS1", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -474,18 +542,22 @@ public class TestH5Lcreate {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcopy_dst_link_exists() throws Throwable {
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lcopy_dst_link_exists() throws Throwable
+    {
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
         H5.H5Lcopy(H5fid, "CPY1", H5fid, "/G1/DS2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lmove_cur_not_exists() throws Throwable {
+    public void testH5Lmove_cur_not_exists() throws Throwable
+    {
         H5.H5Lmove(H5fid, "None", H5fid, "DS1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lmove() {
+    public void testH5Lmove()
+    {
         try {
             H5.H5Lmove(H5fid, "DS1", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -501,60 +573,72 @@ public class TestH5Lcreate {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lmove_dst_link_exists() throws Throwable {
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lmove_dst_link_exists() throws Throwable
+    {
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
         H5.H5Lmove(H5fid, "CPY1", H5fid, "/G1/DS2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_value_by_idx_not_exist_name() throws Throwable {
-        String[] link_value = {null,null};
-        H5.H5Lget_value_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, link_value, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_value_by_idx_not_exist_name() throws Throwable
+    {
+        String[] link_value = {null, null};
+        H5.H5Lget_value_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                               link_value, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_value_by_idx_not_exist_create() throws Throwable {
-        String[] link_value = {null,null};
-        H5.H5Lget_value_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, link_value, HDF5Constants.H5P_DEFAULT);
+    public void testH5Lget_value_by_idx_not_exist_create() throws Throwable
+    {
+        String[] link_value = {null, null};
+        H5.H5Lget_value_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                               link_value, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Lget_value_by_idx_n2_name() {
+    public void testH5Lget_value_by_idx_n2_name()
+    {
         H5L_info_t link_info = null;
-        String[] link_value = {null,null};
-        int link_type = -1;
+        String[] link_value  = {null, null};
+        int link_type        = -1;
 
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("testH5Lget_value_by_idx_n2 ",link_info==null);
-        assertTrue("testH5Lget_value_by_idx_n2 link type", link_info.type==HDF5Constants.H5L_TYPE_SOFT);
+        assertFalse("testH5Lget_value_by_idx_n2 ", link_info == null);
+        assertTrue("testH5Lget_value_by_idx_n2 link type", link_info.type == HDF5Constants.H5L_TYPE_SOFT);
         try {
-            link_type = H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, link_value, HDF5Constants.H5P_DEFAULT);
+            link_type =
+                H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2,
+                                       link_value, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_value_by_idx: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_SOFT);
-        assertFalse("testH5Lget_value_by_idx_n2 ", link_value[0]==null);
-        assertTrue("testH5Lget_value_by_idx_n2 Link Value ", link_value[0].compareTo("/G1/DS2")==0);
+        assertFalse("testH5Lget_value_by_idx_n2 ", link_value[0] == null);
+        assertTrue("testH5Lget_value_by_idx_n2 Link Value ", link_value[0].compareTo("/G1/DS2") == 0);
     }
 
     @Test
-    public void testH5Lget_value_by_idx_n2_create() {
+    public void testH5Lget_value_by_idx_n2_create()
+    {
         H5L_info_t link_info = null;
-        String[] link_value = {null,null};
-        int link_type = -1;
+        String[] link_value  = {null, null};
+        int link_type        = -1;
 
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -562,116 +646,139 @@ public class TestH5Lcreate {
         }
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("testH5Lget_value_by_idx_n2 ", link_info==null);
-        assertTrue("testH5Lget_value_by_idx_n2 link type", link_info.type==HDF5Constants.H5L_TYPE_SOFT);
+        assertFalse("testH5Lget_value_by_idx_n2 ", link_info == null);
+        assertTrue("testH5Lget_value_by_idx_n2 link type", link_info.type == HDF5Constants.H5L_TYPE_SOFT);
         try {
-            link_type = H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, link_value, HDF5Constants.H5P_DEFAULT);
+            link_type =
+                H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                       HDF5Constants.H5_ITER_INC, 2, link_value, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_value_by_idx: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_SOFT);
-        assertFalse("testH5Lget_value_by_idx_n2 ", link_value[0]==null);
-        assertTrue("testH5Lget_value_by_idx_n2 Link Value ", link_value[0].compareTo("/G1/DS2")==0);
+        assertFalse("testH5Lget_value_by_idx_n2 ", link_value[0] == null);
+        assertTrue("testH5Lget_value_by_idx_n2 Link Value ", link_value[0].compareTo("/G1/DS2") == 0);
     }
 
     @Test
-    public void testH5Lget_value_by_idx_external_name() {
+    public void testH5Lget_value_by_idx_external_name()
+    {
         H5L_info_t link_info = null;
-        String[] link_value = {null,null};
-        int link_type = -1;
+        String[] link_value  = {null, null};
+        int link_type        = -1;
 
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("testH5Lget_value_by_idx_ext ", link_info==null);
-        assertTrue("testH5Lget_value_by_idx_ext link type "+link_info.type, link_info.type==HDF5Constants.H5L_TYPE_EXTERNAL);
+        assertFalse("testH5Lget_value_by_idx_ext ", link_info == null);
+        assertTrue("testH5Lget_value_by_idx_ext link type " + link_info.type,
+                   link_info.type == HDF5Constants.H5L_TYPE_EXTERNAL);
         try {
-            link_type = H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, link_value, HDF5Constants.H5P_DEFAULT);
+            link_type =
+                H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2,
+                                       link_value, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_value_by_idx: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_EXTERNAL);
-        assertFalse("testH5Lget_value_by_idx_ext ", link_value[0]==null);
-        assertFalse("testH5Lget_value_by_idx_ext ", link_value[1]==null);
-        assertTrue("testH5Lget_value_by_idx_ext Link Value ", link_value[0].compareTo("DT1")==0);
+        assertFalse("testH5Lget_value_by_idx_ext ", link_value[0] == null);
+        assertFalse("testH5Lget_value_by_idx_ext ", link_value[1] == null);
+        assertTrue("testH5Lget_value_by_idx_ext Link Value ", link_value[0].compareTo("DT1") == 0);
     }
 
     @Test
-    public void testH5Lget_value_by_idx_external_create() {
+    public void testH5Lget_value_by_idx_external_create()
+    {
         H5L_info_t link_info = null;
-        String[] link_value = {null,null};
-        int link_type = -1;
+        String[] link_value  = {null, null};
+        int link_type        = -1;
 
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("testH5Lget_value_by_idx_ext ", link_info==null);
-        assertTrue("testH5Lget_value_by_idx_ext link type "+link_info.type, link_info.type==HDF5Constants.H5L_TYPE_EXTERNAL);
+        assertFalse("testH5Lget_value_by_idx_ext ", link_info == null);
+        assertTrue("testH5Lget_value_by_idx_ext link type " + link_info.type,
+                   link_info.type == HDF5Constants.H5L_TYPE_EXTERNAL);
         try {
-            link_type = H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, link_value, HDF5Constants.H5P_DEFAULT);
+            link_type =
+                H5.H5Lget_value_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                       HDF5Constants.H5_ITER_INC, 2, link_value, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_value_by_idx: " + err);
         }
         assertTrue("Link Type", link_type == HDF5Constants.H5L_TYPE_EXTERNAL);
-        assertFalse("testH5Lget_value_by_idx_ext ", link_value[0]==null);
-        assertFalse("testH5Lget_value_by_idx_ext ", link_value[1]==null);
-        assertTrue("testH5Lget_value_by_idx_ext Link Value ", link_value[0].compareTo("DT1")==0);
+        assertFalse("testH5Lget_value_by_idx_ext ", link_value[0] == null);
+        assertFalse("testH5Lget_value_by_idx_ext ", link_value[1] == null);
+        assertTrue("testH5Lget_value_by_idx_ext Link Value ", link_value[0].compareTo("DT1") == 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ldelete_by_idx_not_exist_name() throws Throwable {
-        H5.H5Ldelete_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Ldelete_by_idx_not_exist_name() throws Throwable
+    {
+        H5.H5Ldelete_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                            HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ldelete_by_idx_not_exist_create() throws Throwable {
-        H5.H5Ldelete_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Ldelete_by_idx_not_exist_create() throws Throwable
+    {
+        H5.H5Ldelete_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                            HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Ldelete_by_idx_n2_name() {
+    public void testH5Ldelete_by_idx_n2_name()
+    {
         H5L_info_t link_info = null;
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("testH5Ldelete_by_idx_n2 ", link_info==null);
-        assertTrue("testH5Ldelete_by_idx_n2 link type", link_info.type==HDF5Constants.H5L_TYPE_SOFT);
+        assertFalse("testH5Ldelete_by_idx_n2 ", link_info == null);
+        assertTrue("testH5Ldelete_by_idx_n2 link type", link_info.type == HDF5Constants.H5L_TYPE_SOFT);
         try {
-            H5.H5Ldelete_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            H5.H5Ldelete_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2,
+                                HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Ldelete_by_idx: " + err);
         }
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (HDF5LibraryException err) {
             link_info = null;
@@ -680,31 +787,35 @@ public class TestH5Lcreate {
             err.printStackTrace();
             fail("H5.H5Ldelete_by_idx: " + err);
         }
-        assertTrue("testH5Ldelete_by_idx_n2 ",link_info==null);
+        assertTrue("testH5Ldelete_by_idx_n2 ", link_info == null);
     }
 
     @Test
-    public void testH5Ldelete_by_idx_n2_create() {
+    public void testH5Ldelete_by_idx_n2_create()
+    {
         H5L_info_t link_info = null;
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lget_info_by_idx: " + err);
         }
-        assertFalse("testH5Ldelete_by_idx_n2 ", link_info==null);
-        assertTrue("testH5Ldelete_by_idx_n2 link type", link_info.type==HDF5Constants.H5L_TYPE_SOFT);
+        assertFalse("testH5Ldelete_by_idx_n2 ", link_info == null);
+        assertTrue("testH5Ldelete_by_idx_n2 link type", link_info.type == HDF5Constants.H5L_TYPE_SOFT);
         try {
-            H5.H5Ldelete_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            H5.H5Ldelete_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2,
+                                HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Ldelete_by_idx: " + err);
         }
         try {
-            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
+            link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                              HDF5Constants.H5_ITER_INC, 2, HDF5Constants.H5P_DEFAULT);
         }
         catch (HDF5LibraryException err) {
             link_info = null;
@@ -713,28 +824,33 @@ public class TestH5Lcreate {
             err.printStackTrace();
             fail("H5.H5Ldelete_by_idx: " + err);
         }
-        assertTrue("testH5Ldelete_by_idx_n2 ",link_info==null);
+        assertTrue("testH5Ldelete_by_idx_n2 ", link_info == null);
     }
 
     @Test
-    public void testH5Lvisit_create() {
+    public void testH5Lvisit_create()
+    {
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lvisit_create: H5Pget_link_creation_order " + err);
         }
 
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
 
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -744,7 +860,8 @@ public class TestH5Lcreate {
         }
         H5L_iterate_opdata_t iter_data = new H5L_iter_data();
         class H5L_iter_callback implements H5L_iterate_t {
-            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5L_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -752,41 +869,60 @@ public class TestH5Lcreate {
         }
         H5L_iterate_t iter_cb = new H5L_iter_callback();
         try {
-            H5.H5Lvisit(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, iter_cb, iter_data);
+            H5.H5Lvisit(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, iter_cb,
+                        iter_data);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Lvisit: " + err);
         }
-        assertFalse("H5Lvisit ",((H5L_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Lvisit "+((H5L_iter_data)iter_data).iterdata.size(),((H5L_iter_data)iter_data).iterdata.size()==6);
-        assertTrue("H5Lvisit "+((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1")==0);
-        assertTrue("H5Lvisit "+((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("G1")==0);
-        assertTrue("H5Lvisit "+((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1/DS2")==0);
-        assertTrue("H5Lvisit "+((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("CPY1")==0);
-        assertTrue("H5Lvisit "+((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("LE")==0);
-        assertTrue("H5Lvisit "+((idata)((H5L_iter_data)iter_data).iterdata.get(5)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(5)).link_name.compareToIgnoreCase("LS")==0);
+        assertFalse("H5Lvisit ", ((H5L_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Lvisit " + ((H5L_iter_data)iter_data).iterdata.size(),
+                   ((H5L_iter_data)iter_data).iterdata.size() == 6);
+        assertTrue("H5Lvisit " + ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1") ==
+                       0);
+        assertTrue("H5Lvisit " + ((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("G1") ==
+                       0);
+        assertTrue(
+            "H5Lvisit " + ((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name,
+            ((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1/DS2") == 0);
+        assertTrue(
+            "H5Lvisit " + ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name,
+            ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("CPY1") == 0);
+        assertTrue("H5Lvisit " + ((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("LE") ==
+                       0);
+        assertTrue("H5Lvisit " + ((idata)((H5L_iter_data)iter_data).iterdata.get(5)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(5)).link_name.compareToIgnoreCase("LS") ==
+                       0);
     }
 
     @Test
-    public void testH5Literate_create() {
+    public void testH5Literate_create()
+    {
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Literate_create: H5Pget_link_creation_order " + err);
         }
 
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
 
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -796,7 +932,8 @@ public class TestH5Lcreate {
         }
         H5L_iterate_opdata_t iter_data = new H5L_iter_data();
         class H5L_iter_callback implements H5L_iterate_t {
-            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5L_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -804,19 +941,30 @@ public class TestH5Lcreate {
         }
         H5L_iterate_t iter_cb = new H5L_iter_callback();
         try {
-            H5.H5Literate(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, iter_cb, iter_data);
+            H5.H5Literate(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, iter_cb,
+                          iter_data);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Literate: " + err);
         }
-        assertFalse("H5Literate ",((H5L_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Literate "+((H5L_iter_data)iter_data).iterdata.size(),((H5L_iter_data)iter_data).iterdata.size()==5);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1")==0);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("G1")==0);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("CPY1")==0);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("LE")==0);
-        assertTrue("H5Literate "+((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name,((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("LS")==0);
+        assertFalse("H5Literate ", ((H5L_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Literate " + ((H5L_iter_data)iter_data).iterdata.size(),
+                   ((H5L_iter_data)iter_data).iterdata.size() == 5);
+        assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1") ==
+                       0);
+        assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("G1") ==
+                       0);
+        assertTrue(
+            "H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name,
+            ((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("CPY1") == 0);
+        assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("LE") ==
+                       0);
+        assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name,
+                   ((idata)((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("LS") ==
+                       0);
     }
-
 }
diff --git a/java/test/TestH5Lparams.java b/java/test/TestH5Lparams.java
index 30ee242..78de663 100644
--- a/java/test/TestH5Lparams.java
+++ b/java/test/TestH5Lparams.java
@@ -13,6 +13,7 @@
 package test;
 
 import static org.junit.Assert.assertTrue;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
@@ -23,206 +24,246 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Lparams {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_value_invalid() throws Throwable {
+    public void testH5Lget_value_invalid() throws Throwable
+    {
         H5.H5Lget_value(-1, "Bogus", null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lget_value_null() throws Throwable {
+    public void testH5Lget_value_null() throws Throwable
+    {
         H5.H5Lget_value(-1, null, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lexists_invalid() throws Throwable {
+    public void testH5Lexists_invalid() throws Throwable
+    {
         H5.H5Lexists(-1, "Bogus", -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lexists_null() throws Throwable {
+    public void testH5Lexists_null() throws Throwable
+    {
         H5.H5Lexists(-1, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_invalid() throws Throwable {
+    public void testH5Lget_info_invalid() throws Throwable
+    {
         H5.H5Lget_info(-1, "Bogus", -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lget_info_null() throws Throwable {
+    public void testH5Lget_info_null() throws Throwable
+    {
         H5.H5Lget_info(-1, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_info_by_idx_invalid() throws Throwable {
+    public void testH5Lget_info_by_idx_invalid() throws Throwable
+    {
         H5.H5Lget_info_by_idx(-1, "Bogus", -1, -1, -1L, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lget_info_by_idx_null() throws Throwable {
+    public void testH5Lget_info_by_idx_null() throws Throwable
+    {
         H5.H5Lget_info_by_idx(-1, null, 0, 0, 0L, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_name_by_idx_invalid() throws Throwable {
+    public void testH5Lget_name_by_idx_invalid() throws Throwable
+    {
         H5.H5Lget_name_by_idx(-1, "Bogus", -1, -1, -1L, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lget_name_by_idx_null() throws Throwable {
+    public void testH5Lget_name_by_idx_null() throws Throwable
+    {
         H5.H5Lget_name_by_idx(-1, null, 0, 0, 0L, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcreate_hard_invalid() throws Throwable {
+    public void testH5Lcreate_hard_invalid() throws Throwable
+    {
         H5.H5Lcreate_hard(-1, "Bogus", -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_hard_null_current() throws Throwable {
+    public void testH5Lcreate_hard_null_current() throws Throwable
+    {
         H5.H5Lcreate_hard(-1, null, 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_hard_null_dest() throws Throwable {
+    public void testH5Lcreate_hard_null_dest() throws Throwable
+    {
         H5.H5Lcreate_hard(-1, "Bogus", 0, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ldelete_invalid() throws Throwable {
+    public void testH5Ldelete_invalid() throws Throwable
+    {
         H5.H5Ldelete(-1, "Bogus", -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ldelete_null() throws Throwable {
+    public void testH5Ldelete_null() throws Throwable
+    {
         H5.H5Ldelete(-1, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcreate_soft_invalid() throws Throwable {
-        H5.H5Lcreate_soft( "Bogus", -1, "Bogus", -1, -1);
+    public void testH5Lcreate_soft_invalid() throws Throwable
+    {
+        H5.H5Lcreate_soft("Bogus", -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_soft_null_current() throws Throwable {
+    public void testH5Lcreate_soft_null_current() throws Throwable
+    {
         H5.H5Lcreate_soft(null, 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_soft_null_dest() throws Throwable {
+    public void testH5Lcreate_soft_null_dest() throws Throwable
+    {
         H5.H5Lcreate_soft("Bogus", 0, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcreate_external_invalid() throws Throwable {
+    public void testH5Lcreate_external_invalid() throws Throwable
+    {
         H5.H5Lcreate_external("PathToFile", "Bogus", -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_external_null_file() throws Throwable {
+    public void testH5Lcreate_external_null_file() throws Throwable
+    {
         H5.H5Lcreate_external(null, "Bogus", 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_external_null_current() throws Throwable {
+    public void testH5Lcreate_external_null_current() throws Throwable
+    {
         H5.H5Lcreate_external("PathToFile", null, 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcreate_external_null_dest() throws Throwable {
+    public void testH5Lcreate_external_null_dest() throws Throwable
+    {
         H5.H5Lcreate_external("PathToFile", "Bogus", 0, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lcopy_invalid() throws Throwable {
+    public void testH5Lcopy_invalid() throws Throwable
+    {
         H5.H5Lcopy(-1, "Bogus", -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcopy_null_current() throws Throwable {
+    public void testH5Lcopy_null_current() throws Throwable
+    {
         H5.H5Lcopy(-1, null, 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lcopy_null_dest() throws Throwable {
+    public void testH5Lcopy_null_dest() throws Throwable
+    {
         H5.H5Lcopy(-1, "Bogus", 0, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lmove_invalid() throws Throwable {
+    public void testH5Lmove_invalid() throws Throwable
+    {
         H5.H5Lmove(-1, "Bogus", -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lmove_null_current() throws Throwable {
+    public void testH5Lmove_null_current() throws Throwable
+    {
         H5.H5Lmove(-1, null, 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lmove_null_dest() throws Throwable {
+    public void testH5Lmove_null_dest() throws Throwable
+    {
         H5.H5Lmove(-1, "Bogus", 0, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Lget_value_by_idx_invalid() throws Throwable {
+    public void testH5Lget_value_by_idx_invalid() throws Throwable
+    {
         H5.H5Lget_value_by_idx(-1, "Bogus", -1, -1, -1L, null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lget_value_by_idx_null() throws Throwable {
+    public void testH5Lget_value_by_idx_null() throws Throwable
+    {
         H5.H5Lget_value_by_idx(-1, null, 0, 0, 0L, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ldelete_by_idx_invalid() throws Throwable {
+    public void testH5Ldelete_by_idx_invalid() throws Throwable
+    {
         H5.H5Ldelete_by_idx(-1, "Bogus", -1, -1, -1L, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ldelete_by_idx_null() throws Throwable {
+    public void testH5Ldelete_by_idx_null() throws Throwable
+    {
         H5.H5Ldelete_by_idx(-1, null, 0, 0, 0L, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lvisit_null() throws Throwable {
+    public void testH5Lvisit_null() throws Throwable
+    {
         H5.H5Lvisit(-1, -1, -1, null, null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lvisit_by_name_nullname() throws Throwable {
+    public void testH5Lvisit_by_name_nullname() throws Throwable
+    {
         H5.H5Lvisit_by_name(-1, null, -1, -1, null, null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Lvisit_by_name_null() throws Throwable {
+    public void testH5Lvisit_by_name_null() throws Throwable
+    {
         H5.H5Lvisit_by_name(-1, "Bogus", -1, -1, null, null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Literate_null() throws Throwable {
+    public void testH5Literate_null() throws Throwable
+    {
         H5.H5Literate(-1, -1, -1, -1, null, null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Literate_by_name_nullname() throws Throwable {
+    public void testH5Literate_by_name_nullname() throws Throwable
+    {
         H5.H5Literate_by_name(-1, null, -1, -1, -1, null, null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Literate_by_name_null() throws Throwable {
+    public void testH5Literate_by_name_null() throws Throwable
+    {
         H5.H5Literate_by_name(-1, "Bogus", -1, -1, -1, null, null, -1);
     }
-
 }
diff --git a/java/test/TestH5Obasic.java b/java/test/TestH5Obasic.java
index 350b7aa..cac2e6a 100644
--- a/java/test/TestH5Obasic.java
+++ b/java/test/TestH5Obasic.java
@@ -20,13 +20,13 @@ import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
-import hdf.hdf5lib.callbacks.H5O_iterate_t;
 import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t;
+import hdf.hdf5lib.callbacks.H5O_iterate_t;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
+import hdf.hdf5lib.structs.H5O_hdr_info_t;
 import hdf.hdf5lib.structs.H5O_info_t;
 import hdf.hdf5lib.structs.H5O_native_info_t;
 import hdf.hdf5lib.structs.H5O_token_t;
-import hdf.hdf5lib.structs.H5O_hdr_info_t;
 import hdf.hdf5lib.structs.H5_ih_info_t;
 
 import org.junit.After;
@@ -36,21 +36,21 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Obasic {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "h5ex_g_iterateO1.hdf";
     private static H5O_token_t H5la_ds1 = null;
-    private static H5O_token_t H5la_l1 = null;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
+    private static H5O_token_t H5la_l1  = null;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
 
     @Before
-    public void openH5file()
-            throws HDF5LibraryException, NullPointerException {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void openH5file() throws HDF5LibraryException, NullPointerException
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY,
-                HDF5Constants.H5P_DEFAULT);
+            H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -59,103 +59,136 @@ public class TestH5Obasic {
     }
 
     @After
-    public void closeH5file() throws HDF5LibraryException {
+    public void closeH5file() throws HDF5LibraryException
+    {
         if (H5fid > 0) {
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         }
         System.out.println();
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oopen_not_exists() throws Throwable {
+    public void testH5Oopen_not_exists() throws Throwable
+    {
         long oid = HDF5Constants.H5I_INVALID_HID;
 
         oid = H5.H5Oopen(H5fid, "Never_created", HDF5Constants.H5P_DEFAULT);
 
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_info_dataset() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_info_dataset()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
 
         try {
-            oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_info_hardlink() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_info_hardlink()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
-            oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_info_group() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_info_group()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
-            oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_GROUP);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP);
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_info_datatype() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_info_datatype()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
-            oid = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_name_not_exist_name() throws Throwable {
+    public void testH5Oget_info_by_name_not_exist_name() throws Throwable
+    {
         H5.H5Oget_info_by_name(H5fid, "None", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_name_not_exists() throws Throwable {
+    public void testH5Oget_info_by_name_not_exists() throws Throwable
+    {
         H5.H5Oget_info_by_name(H5fid, "Bogus", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Oget_info_by_name_dataset() {
+    public void testH5Oget_info_by_name_dataset()
+    {
         H5O_info_t obj_info = null;
 
         try {
@@ -165,12 +198,13 @@ public class TestH5Obasic {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
     }
 
     @Test
-    public void testH5Oget_info_by_name_hardlink() {
+    public void testH5Oget_info_by_name_hardlink()
+    {
         H5O_info_t obj_info = null;
         try {
             obj_info = H5.H5Oget_info_by_name(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
@@ -179,12 +213,13 @@ public class TestH5Obasic {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
     }
 
     @Test
-    public void testH5Oget_info_by_name_group() {
+    public void testH5Oget_info_by_name_group()
+    {
         H5O_info_t obj_info = null;
         try {
             obj_info = H5.H5Oget_info_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
@@ -193,12 +228,13 @@ public class TestH5Obasic {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_GROUP);
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP);
     }
 
     @Test
-    public void testH5Oget_info_by_name_datatype() {
+    public void testH5Oget_info_by_name_datatype()
+    {
         H5O_info_t obj_info = null;
         try {
             obj_info = H5.H5Oget_info_by_name(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
@@ -207,36 +243,45 @@ public class TestH5Obasic {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info ",obj_info==null);
-        assertTrue("H5Oget_info object type",obj_info.type==HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_idx_name_not_exist_name() throws Throwable {
-        H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_info_by_idx_name_not_exist_name() throws Throwable
+    {
+        H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_idx_name_not_exist_create() throws Throwable {
-        H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_info_by_idx_name_not_exist_create() throws Throwable
+    {
+        H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_idx_not_exist_name() throws Throwable {
-        H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_info_by_idx_not_exist_name() throws Throwable
+    {
+        H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_idx_not_exist_create() throws Throwable {
-        H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_info_by_idx_not_exist_create() throws Throwable
+    {
+        H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5,
+                              HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Oget_info_by_idx_n0() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_info_by_idx_n0()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
-            oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
@@ -244,25 +289,32 @@ public class TestH5Obasic {
             fail("testH5Oget_info_by_idx_n0:H5.H5Oget_info: " + err);
         }
         H5la_ds1 = obj_info.token;
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
         try {
-            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
+        try {
+            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                             HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("testH5Oget_info_by_idx_n0:H5.H5Oget_info_by_idx: " + err);
         }
-        assertFalse("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx ",obj_info==null);
-        assertTrue("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx link type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx ", obj_info == null);
+        assertTrue("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx link type",
+                   obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
         assertTrue("testH5Oget_info_by_idx_n0:Link Object token", obj_info.token.equals(H5la_ds1));
     }
 
     @Test
-    public void testH5Oget_info_by_idx_n3() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_info_by_idx_n3()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
-            oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
@@ -270,26 +322,33 @@ public class TestH5Obasic {
             fail("testH5Oget_info_by_idx_n3:H5.H5Oget_info: " + err);
         }
         H5la_l1 = obj_info.token;
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
         try {
-            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
+        try {
+            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                             HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("testH5Oget_info_by_idx_n3:H5.H5Oget_info_by_idx: " + err);
         }
-        assertFalse("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx ",obj_info==null);
-        assertTrue("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx link type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx ", obj_info == null);
+        assertTrue("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx link type",
+                   obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
         assertTrue("testH5Oget_info_by_idx_n3:Link Object Token", obj_info.token.equals(H5la_l1));
     }
 
     @Test
-    public void testH5Oget_native_info_dataset() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_native_info_dataset()
+    {
+        long oid                      = HDF5Constants.H5I_INVALID_HID;
         H5O_native_info_t native_info = null;
 
         try {
-            oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+            oid         = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
             native_info = H5.H5Oget_native_info(oid);
         }
         catch (Throwable err) {
@@ -300,16 +359,21 @@ public class TestH5Obasic {
         assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
         assertFalse("H5Oget_native_info ", native_info.obj_info == null);
         assertFalse("H5Oget_native_info ", native_info.attr_info == null);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_native_info_hardlink() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_native_info_hardlink()
+    {
+        long oid                      = HDF5Constants.H5I_INVALID_HID;
         H5O_native_info_t native_info = null;
 
         try {
-            oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
+            oid         = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             native_info = H5.H5Oget_native_info(oid);
         }
         catch (Throwable err) {
@@ -320,16 +384,21 @@ public class TestH5Obasic {
         assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
         assertFalse("H5Oget_native_info ", native_info.obj_info == null);
         assertFalse("H5Oget_native_info ", native_info.attr_info == null);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_native_info_group() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_native_info_group()
+    {
+        long oid                      = HDF5Constants.H5I_INVALID_HID;
         H5O_native_info_t native_info = null;
 
         try {
-            oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
+            oid         = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
             native_info = H5.H5Oget_native_info(oid);
         }
         catch (Throwable err) {
@@ -340,16 +409,21 @@ public class TestH5Obasic {
         assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
         assertFalse("H5Oget_native_info ", native_info.obj_info == null);
         assertFalse("H5Oget_native_info ", native_info.attr_info == null);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test
-    public void testH5Oget_native_info_datatype() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_native_info_datatype()
+    {
+        long oid                      = HDF5Constants.H5I_INVALID_HID;
         H5O_native_info_t native_info = null;
 
         try {
-            oid = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
+            oid         = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
             native_info = H5.H5Oget_native_info(oid);
         }
         catch (Throwable err) {
@@ -360,21 +434,28 @@ public class TestH5Obasic {
         assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
         assertFalse("H5Oget_native_info ", native_info.obj_info == null);
         assertFalse("H5Oget_native_info ", native_info.attr_info == null);
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_name_not_exist_name() throws Throwable {
+    public void testH5Oget_native_info_by_name_not_exist_name() throws Throwable
+    {
         H5.H5Oget_native_info_by_name(H5fid, "None", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_name_not_exists() throws Throwable {
+    public void testH5Oget_native_info_by_name_not_exists() throws Throwable
+    {
         H5.H5Oget_native_info_by_name(H5fid, "Bogus", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Oget_native_info_by_name_dataset() {
+    public void testH5Oget_native_info_by_name_dataset()
+    {
         H5O_native_info_t native_info = null;
 
         try {
@@ -391,7 +472,8 @@ public class TestH5Obasic {
     }
 
     @Test
-    public void testH5Oget_native_info_by_name_hardlink() {
+    public void testH5Oget_native_info_by_name_hardlink()
+    {
         H5O_native_info_t native_info = null;
 
         try {
@@ -408,7 +490,8 @@ public class TestH5Obasic {
     }
 
     @Test
-    public void testH5Oget_native_info_by_name_group() {
+    public void testH5Oget_native_info_by_name_group()
+    {
         H5O_native_info_t native_info = null;
 
         try {
@@ -425,7 +508,8 @@ public class TestH5Obasic {
     }
 
     @Test
-    public void testH5Oget_native_info_by_name_datatype() {
+    public void testH5Oget_native_info_by_name_datatype()
+    {
         H5O_native_info_t native_info = null;
 
         try {
@@ -442,35 +526,44 @@ public class TestH5Obasic {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_idx_name_not_exist_name() throws Throwable {
-        H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_native_info_by_idx_name_not_exist_name() throws Throwable
+    {
+        H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                                     HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_idx_name_not_exist_create() throws Throwable {
-        H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_native_info_by_idx_name_not_exist_create() throws Throwable
+    {
+        H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                     HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_idx_not_exist_name() throws Throwable {
-        H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_native_info_by_idx_not_exist_name() throws Throwable
+    {
+        H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5,
+                                     HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_idx_not_exist_create() throws Throwable {
-        H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT);
+    public void testH5Oget_native_info_by_idx_not_exist_create() throws Throwable
+    {
+        H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC,
+                                     5, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Oget_native_info_by_idx_n0() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_native_info_by_idx_n0()
+    {
+        long oid                      = HDF5Constants.H5I_INVALID_HID;
         H5O_native_info_t native_info = null;
         H5O_hdr_info_t ohdr;
         H5_ih_info_t oinfo;
         H5_ih_info_t ainfo;
 
         try {
-            oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+            oid         = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
             native_info = H5.H5Oget_native_info(oid);
         }
         catch (Throwable err) {
@@ -478,14 +571,20 @@ public class TestH5Obasic {
             fail("testH5Oget_native_info_by_idx_n0:H5.H5Oget_native_info: " + err);
         }
 
-        ohdr = native_info.hdr_info;
+        ohdr  = native_info.hdr_info;
         oinfo = native_info.obj_info;
         ainfo = native_info.attr_info;
 
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
 
         try {
-            native_info = H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            native_info =
+                H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                             HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -501,15 +600,16 @@ public class TestH5Obasic {
     }
 
     @Test
-    public void testH5Oget_native_info_by_idx_n3() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oget_native_info_by_idx_n3()
+    {
+        long oid                      = HDF5Constants.H5I_INVALID_HID;
         H5O_native_info_t native_info = null;
         H5O_hdr_info_t ohdr;
         H5_ih_info_t oinfo;
         H5_ih_info_t ainfo;
 
         try {
-            oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
+            oid         = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
             native_info = H5.H5Oget_native_info(oid);
         }
         catch (Throwable err) {
@@ -517,14 +617,20 @@ public class TestH5Obasic {
             fail("testH5Oget_native_info_by_idx_n3:H5.H5Oget_native_info: " + err);
         }
 
-        ohdr = native_info.hdr_info;
+        ohdr  = native_info.hdr_info;
         oinfo = native_info.obj_info;
         ainfo = native_info.attr_info;
 
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
 
         try {
-            native_info = H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
+            native_info =
+                H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
+                                             HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -540,11 +646,13 @@ public class TestH5Obasic {
     }
 
     @Test
-    public void testH5Ovisit() {
+    public void testH5Ovisit()
+    {
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -554,7 +662,8 @@ public class TestH5Obasic {
         }
         H5O_iterate_opdata_t iter_data = new H5O_iter_data();
         class H5O_iter_callback implements H5O_iterate_t {
-            public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5O_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -568,22 +677,31 @@ public class TestH5Obasic {
             err.printStackTrace();
             fail("H5.H5Ovisit: " + err);
         }
-        assertFalse("H5Ovisit ",((H5O_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Ovisit "+((H5O_iter_data)iter_data).iterdata.size(),((H5O_iter_data)iter_data).iterdata.size()==5);
-        assertTrue("H5Ovisit "+(((H5O_iter_data)iter_data).iterdata.get(0)).link_name,(((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".")==0);
-        assertTrue("H5Ovisit "+(((H5O_iter_data)iter_data).iterdata.get(1)).link_name,(((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS1")==0);
-        assertTrue("H5Ovisit "+(((H5O_iter_data)iter_data).iterdata.get(2)).link_name,(((H5O_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("DT1")==0);
-        assertTrue("H5Ovisit "+(((H5O_iter_data)iter_data).iterdata.get(3)).link_name,(((H5O_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1")==0);
-        assertTrue("H5Ovisit "+(((H5O_iter_data)iter_data).iterdata.get(4)).link_name,(((H5O_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("G1/DS2")==0);
-//        assertTrue("H5Ovisit "+((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name,((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name.compareToIgnoreCase("L1")==0);
+        assertFalse("H5Ovisit ", ((H5O_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Ovisit " + ((H5O_iter_data)iter_data).iterdata.size(),
+                   ((H5O_iter_data)iter_data).iterdata.size() == 5);
+        assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(0)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") == 0);
+        assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(1)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS1") == 0);
+        assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(2)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("DT1") == 0);
+        assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(3)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1") == 0);
+        assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(4)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("G1/DS2") == 0);
+        //        assertTrue("H5Ovisit
+        //        "+((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name,((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name.compareToIgnoreCase("L1")==0);
     }
 
     @Test
-    public void testH5Ovisit_by_name() {
+    public void testH5Ovisit_by_name()
+    {
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -593,7 +711,8 @@ public class TestH5Obasic {
         }
         H5O_iterate_opdata_t iter_data = new H5O_iter_data();
         class H5O_iter_callback implements H5O_iterate_t {
-            public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5O_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -601,20 +720,25 @@ public class TestH5Obasic {
         }
         H5O_iterate_t iter_cb = new H5O_iter_callback();
         try {
-            H5.H5Ovisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT);
+            H5.H5Ovisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb,
+                                iter_data, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Ovisit_by_name: " + err);
         }
-        assertFalse("H5Ovisit_by_name ",((H5O_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Ovisit_by_name "+((H5O_iter_data)iter_data).iterdata.size(),((H5O_iter_data)iter_data).iterdata.size()==2);
-        assertTrue("H5Ovisit_by_name "+(((H5O_iter_data)iter_data).iterdata.get(0)).link_name,(((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".")==0);
-        assertTrue("H5Ovisit_by_name "+(((H5O_iter_data)iter_data).iterdata.get(1)).link_name,(((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS2")==0);
+        assertFalse("H5Ovisit_by_name ", ((H5O_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Ovisit_by_name " + ((H5O_iter_data)iter_data).iterdata.size(),
+                   ((H5O_iter_data)iter_data).iterdata.size() == 2);
+        assertTrue("H5Ovisit_by_name " + (((H5O_iter_data)iter_data).iterdata.get(0)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") == 0);
+        assertTrue("H5Ovisit_by_name " + (((H5O_iter_data)iter_data).iterdata.get(1)).link_name,
+                   (((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS2") == 0);
     }
 
     @Test
-    public void testH5Oexists_by_name() {
+    public void testH5Oexists_by_name()
+    {
         boolean name_exists = false;
         try {
             name_exists = H5.H5Oexists_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
@@ -624,16 +748,17 @@ public class TestH5Obasic {
             fail("H5.H5Oexists_by_name: " + err);
         }
         assertTrue("H5Oexists_by_name ", name_exists);
-        //TODO get dangling link result
+        // TODO get dangling link result
     }
 
     @Test
-    public void testH5Oopen_by_token() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oopen_by_token()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
             try {
-                oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+                oid      = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
                 obj_info = H5.H5Oget_info(oid);
             }
             catch (Throwable err) {
@@ -641,7 +766,11 @@ public class TestH5Obasic {
                 fail("testH5Oopen_by_token: H5.H5Oget_info: " + err);
             }
             H5la_ds1 = obj_info.token;
-            try {H5.H5Oclose(oid);} catch (Exception ex) {}
+            try {
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
             try {
                 oid = H5.H5Oopen_by_token(H5fid, H5la_ds1);
             }
@@ -656,22 +785,28 @@ public class TestH5Obasic {
                 err.printStackTrace();
                 fail("testH5Oopen_by_token: H5.H5Oget_info: " + err);
             }
-            assertFalse("testH5Oopen_by_token: H5Oget_info ",obj_info==null);
-            assertTrue("testH5Oopen_by_token: H5Oget_info link type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+            assertFalse("testH5Oopen_by_token: H5Oget_info ", obj_info == null);
+            assertTrue("testH5Oopen_by_token: H5Oget_info link type",
+                       obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
             assertTrue("testH5Oopen_by_token: Link Object Token", obj_info.token.equals(H5la_ds1));
         }
         finally {
-            try{H5.H5Oclose(oid);} catch (Exception ex) {}
+            try {
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Oopen_by_idx_n0() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oopen_by_idx_n0()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
             try {
-                oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+                oid      = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
                 obj_info = H5.H5Oget_info(oid);
             }
             catch (Throwable err) {
@@ -679,9 +814,14 @@ public class TestH5Obasic {
                 fail("testH5Oopen_by_idx_n0: H5.H5Oget_info: " + err);
             }
             H5la_ds1 = obj_info.token;
-            try {H5.H5Oclose(oid);} catch (Exception ex) {}
             try {
-                oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
+                                        HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -694,22 +834,28 @@ public class TestH5Obasic {
                 err.printStackTrace();
                 fail("testH5Oopen_by_idx_n0: H5.H5Oget_info_by_idx: " + err);
             }
-            assertFalse("testH5Oopen_by_idx_n0: H5Oget_info_by_idx ",obj_info==null);
-            assertTrue("testH5Oopen_by_idx_n0: H5Oget_info_by_idx link type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+            assertFalse("testH5Oopen_by_idx_n0: H5Oget_info_by_idx ", obj_info == null);
+            assertTrue("testH5Oopen_by_idx_n0: H5Oget_info_by_idx link type",
+                       obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
             assertTrue("testH5Oopen_by_idx_n0: Link Object Token", obj_info.token.equals(H5la_ds1));
         }
         finally {
-            try{H5.H5Oclose(oid);} catch (Exception ex) {}
+            try {
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Oopen_by_idx_n3() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oopen_by_idx_n3()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
             try {
-                oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
+                oid      = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
                 obj_info = H5.H5Oget_info(oid);
             }
             catch (Throwable err) {
@@ -717,9 +863,14 @@ public class TestH5Obasic {
                 fail("testH5Oopen_by_idx_n3:H5.H5Oget_info: " + err);
             }
             H5la_l1 = obj_info.token;
-            try {H5.H5Oclose(oid);} catch (Exception ex) {}
             try {
-                oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3,
+                                        HDF5Constants.H5P_DEFAULT);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -732,12 +883,17 @@ public class TestH5Obasic {
                 err.printStackTrace();
                 fail("testH5Oopen_by_idx_n3:H5.H5Oget_info_by_idx: " + err);
             }
-            assertFalse("testH5Oopen_by_idx_n3:H5Oget_info_by_idx ",obj_info==null);
-            assertTrue("testH5Oopen_by_idx_n3:H5Oget_info_by_idx link type",obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+            assertFalse("testH5Oopen_by_idx_n3:H5Oget_info_by_idx ", obj_info == null);
+            assertTrue("testH5Oopen_by_idx_n3:H5Oget_info_by_idx link type",
+                       obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
             assertTrue("testH5Oopen_by_idx_n3:Link Object Token", obj_info.token.equals(H5la_l1));
         }
         finally {
-            try{H5.H5Oclose(oid);} catch (Exception ex) {}
+            try {
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 }
diff --git a/java/test/TestH5Ocopy.java b/java/test/TestH5Ocopy.java
index 821cad3..e429fef 100644
--- a/java/test/TestH5Ocopy.java
+++ b/java/test/TestH5Ocopy.java
@@ -31,20 +31,22 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Ocopy {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname             = new TestName();
     private static final String FILENAME = "testRefsattribute.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did1 = HDF5Constants.H5I_INVALID_HID;
-    long H5did2 = HDF5Constants.H5I_INVALID_HID;
-    long H5gcpl = HDF5Constants.H5I_INVALID_HID;
-    long H5gid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid2 = HDF5Constants.H5I_INVALID_HID;
-    long[] dims = { 2 };
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X       = 4;
+    private static final int DIM_Y       = 6;
+    long H5fid                           = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5did1                          = HDF5Constants.H5I_INVALID_HID;
+    long H5did2                          = HDF5Constants.H5I_INVALID_HID;
+    long H5gcpl                          = HDF5Constants.H5I_INVALID_HID;
+    long H5gid                           = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid2                         = HDF5Constants.H5I_INVALID_HID;
+    long[] dims                          = {2};
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
@@ -57,87 +59,113 @@ public class TestH5Ocopy {
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Dcreate: " + err);
         }
-        assertTrue("TestH5O._createDataset: ",did >= 0);
+        assertTrue("TestH5O._createDataset: ", did >= 0);
 
         return did;
     }
 
-    private final long _createGroup(long fid, String name) {
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5gcpl = HDF5Constants.H5P_DEFAULT;
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                    H5gcpl, HDF5Constants.H5P_DEFAULT);
+            gid    = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, H5gcpl, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gcreate: " + err);
         }
-        assertTrue("TestH5O._createGroup: ",gid >= 0);
+        assertTrue("TestH5O._createGroup: ", gid >= 0);
 
         return gid;
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         try {
-            H5fid = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            H5dsid2 =  H5.H5Screate(HDF5Constants.H5S_SCALAR);
-            H5did1 = _createDataset(H5fid, H5dsid2, "DS2", HDF5Constants.H5P_DEFAULT);
-            H5dsid = H5.H5Screate_simple(1, dims, null);
-            H5gid = _createGroup(H5fid, "/G1");
-            H5did2 = _createDataset(H5gid, H5dsid, "DS1", HDF5Constants.H5P_DEFAULT);
+            H5fid   = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
+            H5dsid2 = H5.H5Screate(HDF5Constants.H5S_SCALAR);
+            H5did1  = _createDataset(H5fid, H5dsid2, "DS2", HDF5Constants.H5P_DEFAULT);
+            H5dsid  = H5.H5Screate_simple(1, dims, null);
+            H5gid   = _createGroup(H5fid, "/G1");
+            H5did2  = _createDataset(H5gid, H5dsid, "DS1", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5O.createH5file: " + err);
         }
-        assertTrue("TestH5O.createH5file: H5.H5Fcreate: ",H5fid >= 0);
-        assertTrue("TestH5O.createH5file: H5.H5Screate_simple: ",H5dsid >= 0);
-        assertTrue("TestH5O.createH5file: H5.H5Gcreate: ",H5gid >= 0);
+        assertTrue("TestH5O.createH5file: H5.H5Fcreate: ", H5fid >= 0);
+        assertTrue("TestH5O.createH5file: H5.H5Screate_simple: ", H5dsid >= 0);
+        assertTrue("TestH5O.createH5file: H5.H5Gcreate: ", H5gid >= 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5gid > 0)
-            try {H5.H5Gclose(H5gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(H5gid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did2 > 0)
-            try {H5.H5Dclose(H5did2);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did2);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid2 > 0)
-            try {H5.H5Sclose(H5dsid2);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid2);
+            }
+            catch (Exception ex) {
+            }
         if (H5did1 > 0)
-            try {H5.H5Dclose(H5did1);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did1);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(FILENAME);
         System.out.println();
     }
 
     @Test
-    public void testH5OcopyRefsAttr() {
-        long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
+    public void testH5OcopyRefsAttr()
+    {
+        long ocp_plist_id  = HDF5Constants.H5I_INVALID_HID;
         byte[][] dset_data = new byte[2][HDF5Constants.H5R_REF_BUF_SIZE];
-        long attribute_id = HDF5Constants.H5I_INVALID_HID;
+        long attribute_id  = HDF5Constants.H5I_INVALID_HID;
 
         try {
             try {
@@ -147,7 +175,7 @@ public class TestH5Ocopy {
                 err.printStackTrace();
                 fail("testH5OcopyRefsAttr: H5Rcreate_object " + err);
             }
-    
+
             try {
                 dset_data[1] = H5.H5Rcreate_object(H5fid, "DS2", HDF5Constants.H5P_DEFAULT);
             }
@@ -155,27 +183,40 @@ public class TestH5Ocopy {
                 err.printStackTrace();
                 fail("testH5OcopyRefsAttr: H5Rcreate_object " + err);
             }
-    
+
             try {
-                attribute_id = H5.H5Acreate(H5did2, "A1", HDF5Constants.H5T_STD_REF, H5dsid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                attribute_id = H5.H5Acreate(H5did2, "A1", HDF5Constants.H5T_STD_REF, H5dsid,
+                                            HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
                 assertTrue("testH5OcopyRefsAttr.H5Acreate: ", attribute_id >= 0);
                 H5.H5Awrite(attribute_id, HDF5Constants.H5T_STD_REF, dset_data);
-    
+
                 H5.H5Aclose(attribute_id);
             }
             catch (Exception ex) {
                 fail("testH5OcopyRefsAttr: H5Awrite failed");
             }
             finally {
-                try {H5.H5Aclose(attribute_id);} catch (Exception exx) {}
+                try {
+                    H5.H5Aclose(attribute_id);
+                }
+                catch (Exception exx) {
+                }
             }
         }
         catch (Exception ex) {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Rdestroy(dset_data[1]);} catch (Exception ex) {}
-            try {H5.H5Rdestroy(dset_data[0]);} catch (Exception ex) {}
+            try {
+                H5.H5Rdestroy(dset_data[1]);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Rdestroy(dset_data[0]);
+            }
+            catch (Exception ex) {
+            }
         }
 
         try {
@@ -185,19 +226,24 @@ public class TestH5Ocopy {
             H5.H5Ocopy(H5fid, ".", H5fid, "CPYREF", ocp_plist_id, HDF5Constants.H5P_DEFAULT);
         }
         catch (Exception ex) {
-             fail("testH5OcopyRefsAttr: H5Ocopy failed");
+            fail("testH5OcopyRefsAttr: H5Ocopy failed");
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5OcopyRefsDatasettodiffFile() {
+    public void testH5OcopyRefsDatasettodiffFile()
+    {
         byte[][] dset_data = new byte[2][HDF5Constants.H5R_REF_BUF_SIZE];
-        long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
-        long dataset_id = HDF5Constants.H5I_INVALID_HID;
-        long H5fid2 = HDF5Constants.H5I_INVALID_HID;
+        long ocp_plist_id  = HDF5Constants.H5I_INVALID_HID;
+        long dataset_id    = HDF5Constants.H5I_INVALID_HID;
+        long H5fid2        = HDF5Constants.H5I_INVALID_HID;
 
         try {
             try {
@@ -214,72 +260,96 @@ public class TestH5Ocopy {
                 err.printStackTrace();
                 fail("testH5OcopyRefsDatasettodiffFile: H5Rcreate_object " + err);
             }
-    
+
             try {
-                dataset_id = H5.H5Dcreate(H5fid, "DSREF",
-                        HDF5Constants.H5T_STD_REF, H5dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                dataset_id =
+                    H5.H5Dcreate(H5fid, "DSREF", HDF5Constants.H5T_STD_REF, H5dsid, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
                 assertTrue("testH5OcopyRefsDatasettodiffFile.H5Dcreate: ", dataset_id >= 0);
-                H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
+                H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL,
+                            HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
                 H5.H5Dclose(dataset_id);
             }
             catch (Exception ex) {
                 fail("testH5OcopyRefsDatasettodiffFile: create dataset failed");
             }
             finally {
-                try {H5.H5Dclose(dataset_id);} catch (Exception exx) {}
+                try {
+                    H5.H5Dclose(dataset_id);
+                }
+                catch (Exception exx) {
+                }
             }
         }
         catch (Exception ex) {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Rdestroy(dset_data[0]);} catch (Exception ex) {}
-            try {H5.H5Rdestroy(dset_data[1]);} catch (Exception ex) {}
+            try {
+                H5.H5Rdestroy(dset_data[0]);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Rdestroy(dset_data[1]);
+            }
+            catch (Exception ex) {
+            }
         }
 
         try {
-            //create new file
-            H5fid2 = H5.H5Fcreate("copy.h5", HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            // create new file
+            H5fid2 = H5.H5Fcreate("copy.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                  HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5OcopyRefsDatasettodiffFile.H5Fcreate: ", H5fid2 >= 0);
             H5.H5Fflush(H5fid2, HDF5Constants.H5F_SCOPE_LOCAL);
         }
         catch (Exception ex) {
-            try {H5.H5Fclose(H5fid2);} catch (Exception exx) {}
+            try {
+                H5.H5Fclose(H5fid2);
+            }
+            catch (Exception exx) {
+            }
             fail("testH5OcopyRefsDatasettodiffFile: H5Fcreate failed");
         }
 
         try {
-            //create object copy property list id and set the flags.
+            // create object copy property list id and set the flags.
             ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
             assertTrue("testH5OcopyRefsDatasettodiffFile.H5Pcreate: ", ocp_plist_id >= 0);
             H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
 
-            //Perform copy function.
+            // Perform copy function.
             H5.H5Ocopy(H5fid, ".", H5fid2, "CPYREFD", ocp_plist_id, HDF5Constants.H5P_DEFAULT);
         }
-        catch (Exception ex){
+        catch (Exception ex) {
             ex.printStackTrace();
             fail("testH5OcopyRefsDatasettodiffFile: H5Ocopy failed");
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception ex) {}
-            try {H5.H5Fclose(H5fid2);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Fclose(H5fid2);
+            }
+            catch (Exception ex) {
+            }
         }
         _deleteFile("copy.h5");
     }
 
     @Test
-    public void testH5OcopyRefsDatasettosameFile() {
+    public void testH5OcopyRefsDatasettosameFile()
+    {
         byte[][] dset_data = new byte[2][HDF5Constants.H5R_REF_BUF_SIZE];
         byte[][] read_data = new byte[2][HDF5Constants.H5R_REF_BUF_SIZE];
-        long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
-        long dataset_id = HDF5Constants.H5I_INVALID_HID;
-        long did = HDF5Constants.H5I_INVALID_HID;
-        int obj_type = -1;
+        long ocp_plist_id  = HDF5Constants.H5I_INVALID_HID;
+        long dataset_id    = HDF5Constants.H5I_INVALID_HID;
+        long did           = HDF5Constants.H5I_INVALID_HID;
+        int obj_type       = -1;
 
         try {
             try {
@@ -289,7 +359,7 @@ public class TestH5Ocopy {
                 err.printStackTrace();
                 fail("testH5OcopyRefsDatasettosameFile: H5Rcreate_object " + err);
             }
-    
+
             try {
                 dset_data[1] = H5.H5Rcreate_object(H5fid, "DS2", HDF5Constants.H5P_DEFAULT);
             }
@@ -297,43 +367,54 @@ public class TestH5Ocopy {
                 err.printStackTrace();
                 fail("testH5OcopyRefsDatasettosameFile: H5Rcreate_object " + err);
             }
-    
+
             try {
-                //Create a dataset and write object references to it.
-                dataset_id = H5.H5Dcreate(H5fid, "DSREF",
-                        HDF5Constants.H5T_STD_REF, H5dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                // Create a dataset and write object references to it.
+                dataset_id =
+                    H5.H5Dcreate(H5fid, "DSREF", HDF5Constants.H5T_STD_REF, H5dsid, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
                 assertTrue("testH5OcopyRefsDatasettosameFile.H5Dcreate: ", dataset_id >= 0);
-                H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, dset_data);
-                //Close the dataset.
+                H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL,
+                            HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
+                // Close the dataset.
                 H5.H5Dclose(dataset_id);
             }
             catch (Exception ex) {
                 fail("testH5OcopyRefsDatasettosameFile: create dataset failed");
             }
             finally {
-                try {H5.H5Dclose(dataset_id);} catch (Exception exx) {}
+                try {
+                    H5.H5Dclose(dataset_id);
+                }
+                catch (Exception exx) {
+                }
             }
         }
         catch (Exception ex) {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Rdestroy(dset_data[1]);} catch (Exception ex) {}
-            try {H5.H5Rdestroy(dset_data[0]);} catch (Exception ex) {}
+            try {
+                H5.H5Rdestroy(dset_data[1]);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Rdestroy(dset_data[0]);
+            }
+            catch (Exception ex) {
+            }
         }
 
         try {
             ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
             assertTrue("testH5OcopyRefsDatasettosameFile.H5Pcreate: ", ocp_plist_id >= 0);
             H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
-            //Perform copy function.
+            // Perform copy function.
             try {
                 H5.H5Ocopy(H5fid, "DSREF", H5fid, "CPYREFD", ocp_plist_id, HDF5Constants.H5P_DEFAULT);
             }
-            catch(Exception ex) {
+            catch (Exception ex) {
                 fail("testH5OcopyRefsDatasettosameFile: H5Ocopy failed");
             }
         }
@@ -341,11 +422,15 @@ public class TestH5Ocopy {
             fail("testH5OcopyRefsDatasettosameFile: H5Pset_copy_object failed");
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception exx) {
+            }
         }
 
         try {
-            //Open the dataset that has been copied
+            // Open the dataset that has been copied
             try {
                 did = H5.H5Dopen(H5fid, "DSREF", HDF5Constants.H5P_DEFAULT);
                 assertTrue("testH5OcopyRefsDatasettosameFile.H5Dopen: ", did >= 0);
@@ -355,9 +440,10 @@ public class TestH5Ocopy {
                 fail("testH5OcopyRefsDatasettosameFile: H5Dopen failed");
             }
 
-            //Read the dataset object references in the read_data buffer.
+            // Read the dataset object references in the read_data buffer.
             try {
-                H5.H5Dread(did, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL,HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, read_data);
+                H5.H5Dread(did, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                           HDF5Constants.H5P_DEFAULT, read_data);
             }
             catch (Exception e) {
                 e.printStackTrace();
@@ -369,14 +455,18 @@ public class TestH5Ocopy {
             fail("testH5OcopyRefsDatasettosameFile: open and read dataset failed");
         }
         finally {
-            try {H5.H5Dclose(did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(did);
+            }
+            catch (Exception ex) {
+            }
         }
 
         try {
-            //Get the type of object the reference points to.
+            // Get the type of object the reference points to.
             obj_type = H5.H5Rget_obj_type3(read_data[1], HDF5Constants.H5R_OBJECT);
             assertEquals(obj_type, HDF5Constants.H5O_TYPE_DATASET);
-    
+
             obj_type = H5.H5Rget_obj_type3(read_data[0], HDF5Constants.H5R_OBJECT);
             assertEquals(obj_type, HDF5Constants.H5O_TYPE_GROUP);
         }
@@ -384,22 +474,32 @@ public class TestH5Ocopy {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Rdestroy(read_data[1]);} catch (Exception ex) {}
-            try {H5.H5Rdestroy(read_data[0]);} catch (Exception ex) {}
+            try {
+                H5.H5Rdestroy(read_data[1]);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Rdestroy(read_data[0]);
+            }
+            catch (Exception ex) {
+            }
         }
     }
-    
+
     @Test
-    public void testH5OcopyNullRef() throws Throwable {
+    public void testH5OcopyNullRef() throws Throwable
+    {
         final long _pid_ = HDF5Constants.H5P_DEFAULT;
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        long did = HDF5Constants.H5I_INVALID_HID;
-        long aid = HDF5Constants.H5I_INVALID_HID;
+        long sid         = HDF5Constants.H5I_INVALID_HID;
+        long did         = HDF5Constants.H5I_INVALID_HID;
+        long aid         = HDF5Constants.H5I_INVALID_HID;
 
         try {
             sid = H5.H5Screate_simple(1, new long[] {1}, null);
             assertTrue("testH5OcopyNullRef.H5Screate_simple: ", sid >= 0);
-            did = H5.H5Dcreate(H5fid, "Dataset_with_null_Ref", HDF5Constants.H5T_NATIVE_INT, sid, _pid_, _pid_, _pid_);
+            did = H5.H5Dcreate(H5fid, "Dataset_with_null_Ref", HDF5Constants.H5T_NATIVE_INT, sid, _pid_,
+                               _pid_, _pid_);
             assertTrue("testH5OcopyNullRef.H5Dcreate: ", did > 0);
             aid = H5.H5Acreate(did, "Null_Ref", HDF5Constants.H5T_STD_REF, sid, _pid_, _pid_);
             assertTrue("testH5OcopyNullRef.H5Acreate: ", aid > 0);
@@ -408,20 +508,36 @@ public class TestH5Ocopy {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Dclose(did);} catch (Exception exx) {}
-            try {H5.H5Aclose(aid);} catch (Exception exx) {}
-            try {H5.H5Sclose(sid);} catch (Exception exx) {}
+            try {
+                H5.H5Dclose(did);
+            }
+            catch (Exception exx) {
+            }
+            try {
+                H5.H5Aclose(aid);
+            }
+            catch (Exception exx) {
+            }
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception exx) {
+            }
         }
 
         long ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
         assertTrue("testH5OcopyNullRef.H5Pcreate: ", ocp_plist_id >= 0);
         H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
         try {
-            H5.H5Ocopy(H5fid, "/Dataset_with_null_Ref", H5fid, "/Dataset_with_null_Ref_cp", ocp_plist_id, _pid_);
+            H5.H5Ocopy(H5fid, "/Dataset_with_null_Ref", H5fid, "/Dataset_with_null_Ref_cp", ocp_plist_id,
+                       _pid_);
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception exx) {
+            }
         }
     }
-
 }
diff --git a/java/test/TestH5OcopyOld.java b/java/test/TestH5OcopyOld.java
index e547051..2cfccc7 100644
--- a/java/test/TestH5OcopyOld.java
+++ b/java/test/TestH5OcopyOld.java
@@ -31,20 +31,22 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5OcopyOld {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname             = new TestName();
     private static final String FILENAME = "testRefsattributeO.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did1 = HDF5Constants.H5I_INVALID_HID;
-    long H5did2 = HDF5Constants.H5I_INVALID_HID;
-    long H5gcpl = HDF5Constants.H5I_INVALID_HID;
-    long H5gid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid2 = HDF5Constants.H5I_INVALID_HID;
-    long[] dims = { 2 };
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X       = 4;
+    private static final int DIM_Y       = 6;
+    long H5fid                           = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5did1                          = HDF5Constants.H5I_INVALID_HID;
+    long H5did2                          = HDF5Constants.H5I_INVALID_HID;
+    long H5gcpl                          = HDF5Constants.H5I_INVALID_HID;
+    long H5gid                           = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid2                         = HDF5Constants.H5I_INVALID_HID;
+    long[] dims                          = {2};
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
@@ -57,93 +59,119 @@ public class TestH5OcopyOld {
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Dcreate: " + err);
         }
-        assertTrue("TestH5O._createDataset: ",did >= 0);
+        assertTrue("TestH5O._createDataset: ", did >= 0);
 
         return did;
     }
 
-    private final long _createGroup(long fid, String name) {
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5gcpl = HDF5Constants.H5P_DEFAULT;
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                    H5gcpl, HDF5Constants.H5P_DEFAULT);
+            gid    = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, H5gcpl, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gcreate: " + err);
         }
-        assertTrue("TestH5O._createGroup: ",gid >= 0);
+        assertTrue("TestH5O._createGroup: ", gid >= 0);
 
         return gid;
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         try {
-            H5fid = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            H5dsid2 =  H5.H5Screate(HDF5Constants.H5S_SCALAR);
-            H5did1 = _createDataset(H5fid, H5dsid2, "DS2", HDF5Constants.H5P_DEFAULT);
-            H5dsid = H5.H5Screate_simple(1, dims, null);
-            H5gid = _createGroup(H5fid, "/G1");
-            H5did2 = _createDataset(H5gid, H5dsid, "DS1", HDF5Constants.H5P_DEFAULT);
+            H5fid   = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
+            H5dsid2 = H5.H5Screate(HDF5Constants.H5S_SCALAR);
+            H5did1  = _createDataset(H5fid, H5dsid2, "DS2", HDF5Constants.H5P_DEFAULT);
+            H5dsid  = H5.H5Screate_simple(1, dims, null);
+            H5gid   = _createGroup(H5fid, "/G1");
+            H5did2  = _createDataset(H5gid, H5dsid, "DS1", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5O.createH5file: " + err);
         }
-        assertTrue("TestH5O.createH5file: H5.H5Fcreate: ",H5fid >= 0);
-        assertTrue("TestH5O.createH5file: H5.H5Screate_simple: ",H5dsid >= 0);
-        assertTrue("TestH5O.createH5file: H5.H5Gcreate: ",H5gid >= 0);
+        assertTrue("TestH5O.createH5file: H5.H5Fcreate: ", H5fid >= 0);
+        assertTrue("TestH5O.createH5file: H5.H5Screate_simple: ", H5dsid >= 0);
+        assertTrue("TestH5O.createH5file: H5.H5Gcreate: ", H5gid >= 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5gid > 0)
-            try {H5.H5Gclose(H5gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(H5gid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did2 > 0)
-            try {H5.H5Dclose(H5did2);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did2);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid2 > 0)
-            try {H5.H5Sclose(H5dsid2);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid2);
+            }
+            catch (Exception ex) {
+            }
         if (H5did1 > 0)
-            try {H5.H5Dclose(H5did1);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did1);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(FILENAME);
         System.out.println();
     }
 
     @Test
-    public void testH5OcopyRefsAttr() {
+    public void testH5OcopyRefsAttr()
+    {
         long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
-        byte rbuf0[]=null , rbuf1[] = null;
-        byte[] dset_data = new byte[16];
+        byte rbuf0[] = null, rbuf1[] = null;
+        byte[] dset_data  = new byte[16];
         long attribute_id = HDF5Constants.H5I_INVALID_HID;
 
         try {
             rbuf0 = H5.H5Rcreate(H5fid, "/G1", HDF5Constants.H5R_OBJECT, -1);
             rbuf1 = H5.H5Rcreate(H5fid, "DS2", HDF5Constants.H5R_OBJECT, -1);
-            //System.arraycopy(rbuf0, 0, dset_data, 0, 8);
+            // System.arraycopy(rbuf0, 0, dset_data, 0, 8);
             System.arraycopy(rbuf1, 0, dset_data, 8, 8);
         }
         catch (Exception ex) {
@@ -151,7 +179,8 @@ public class TestH5OcopyOld {
         }
 
         try {
-            attribute_id = H5.H5Acreate(H5did2, "A1", HDF5Constants.H5T_STD_REF_OBJ, H5dsid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            attribute_id = H5.H5Acreate(H5did2, "A1", HDF5Constants.H5T_STD_REF_OBJ, H5dsid,
+                                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5OcopyRefsAttr.H5Acreate: ", attribute_id >= 0);
             H5.H5Awrite(attribute_id, HDF5Constants.H5T_STD_REF_OBJ, dset_data);
 
@@ -161,7 +190,11 @@ public class TestH5OcopyOld {
             fail("testH5OcopyRefsAttr: H5Awrite failed");
         }
         finally {
-            try {H5.H5Aclose(attribute_id);} catch (Exception exx) {}
+            try {
+                H5.H5Aclose(attribute_id);
+            }
+            catch (Exception exx) {
+            }
         }
 
         try {
@@ -171,82 +204,103 @@ public class TestH5OcopyOld {
             H5.H5Ocopy(H5fid, ".", H5fid, "CPYREF", ocp_plist_id, HDF5Constants.H5P_DEFAULT);
         }
         catch (Exception ex) {
-             fail("testH5OcopyRefsAttr: H5Ocopy failed");
+            fail("testH5OcopyRefsAttr: H5Ocopy failed");
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5OcopyRefsDatasettodiffFile() {
-        byte rbuf1[] = null;
-        byte[] dset_data = new byte[16];
+    public void testH5OcopyRefsDatasettodiffFile()
+    {
+        byte rbuf1[]      = null;
+        byte[] dset_data  = new byte[16];
         long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
-        long dataset_id = HDF5Constants.H5I_INVALID_HID;
-        long H5fid2 = HDF5Constants.H5I_INVALID_HID;
+        long dataset_id   = HDF5Constants.H5I_INVALID_HID;
+        long H5fid2       = HDF5Constants.H5I_INVALID_HID;
 
         try {
             rbuf1 = H5.H5Rcreate(H5fid, "DS2", HDF5Constants.H5R_OBJECT, -1);
             System.arraycopy(rbuf1, 0, dset_data, 8, 8);
 
-            dataset_id = H5.H5Dcreate(H5fid, "DSREF",
-                    HDF5Constants.H5T_STD_REF_OBJ, H5dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            dataset_id =
+                H5.H5Dcreate(H5fid, "DSREF", HDF5Constants.H5T_STD_REF_OBJ, H5dsid, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5OcopyRefsDatasettodiffFile.H5Dcreate: ", dataset_id >= 0);
-            H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF_OBJ,
-                    HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    HDF5Constants.H5P_DEFAULT, dset_data);
+            H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF_OBJ, HDF5Constants.H5S_ALL,
+                        HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
             H5.H5Dclose(dataset_id);
         }
         catch (Exception ex) {
             fail("testH5OcopyRefsDatasettodiffFile: create dataset failed");
         }
         finally {
-            try {H5.H5Dclose(dataset_id);} catch (Exception exx) {}
+            try {
+                H5.H5Dclose(dataset_id);
+            }
+            catch (Exception exx) {
+            }
         }
 
         try {
-            //create new file
-            H5fid2 = H5.H5Fcreate("copy.h5", HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            // create new file
+            H5fid2 = H5.H5Fcreate("copy.h5", HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                  HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5OcopyRefsDatasettodiffFile.H5Fcreate: ", H5fid2 >= 0);
             H5.H5Fflush(H5fid2, HDF5Constants.H5F_SCOPE_LOCAL);
         }
         catch (Exception ex) {
-            try {H5.H5Fclose(H5fid2);} catch (Exception exx) {}
+            try {
+                H5.H5Fclose(H5fid2);
+            }
+            catch (Exception exx) {
+            }
             fail("testH5OcopyRefsDatasettodiffFile: H5Fcreate failed");
         }
 
         try {
-            //create object copy property list id and set the flags.
+            // create object copy property list id and set the flags.
             ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
             assertTrue("testH5OcopyRefsDatasettodiffFile.H5Pcreate: ", ocp_plist_id >= 0);
             H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
 
-            //Perform copy function.
+            // Perform copy function.
             H5.H5Ocopy(H5fid, ".", H5fid2, "CPYREFD", ocp_plist_id, HDF5Constants.H5P_DEFAULT);
         }
-        catch (Exception ex){
+        catch (Exception ex) {
             ex.printStackTrace();
             fail("testH5OcopyRefsDatasettodiffFile: H5Ocopy failed");
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception ex) {}
-            try {H5.H5Fclose(H5fid2);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Fclose(H5fid2);
+            }
+            catch (Exception ex) {
+            }
         }
         _deleteFile("copy.h5");
     }
 
     @Test
-    public void testH5OcopyRefsDatasettosameFile() {
-        byte rbuf0[]=null , rbuf1[] = null;
-        byte[] dset_data = new byte[16];
+    public void testH5OcopyRefsDatasettosameFile()
+    {
+        byte rbuf0[] = null, rbuf1[] = null;
+        byte[] dset_data  = new byte[16];
         long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
-        long dataset_id = HDF5Constants.H5I_INVALID_HID;
-        long did = HDF5Constants.H5I_INVALID_HID;
-        int obj_type = -1;
-        byte[] read_data = new byte[16];
+        long dataset_id   = HDF5Constants.H5I_INVALID_HID;
+        long did          = HDF5Constants.H5I_INVALID_HID;
+        int obj_type      = -1;
+        byte[] read_data  = new byte[16];
 
         try {
             rbuf0 = H5.H5Rcreate(H5fid, "/G1", HDF5Constants.H5R_OBJECT, -1);
@@ -254,19 +308,22 @@ public class TestH5OcopyOld {
             System.arraycopy(rbuf0, 0, dset_data, 0, 8);
             System.arraycopy(rbuf1, 0, dset_data, 8, 8);
 
-            //Create a dataset and write object references to it.
-            dataset_id = H5.H5Dcreate(H5fid, "DSREF",
-                    HDF5Constants.H5T_STD_REF_OBJ, H5dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            // Create a dataset and write object references to it.
+            dataset_id =
+                H5.H5Dcreate(H5fid, "DSREF", HDF5Constants.H5T_STD_REF_OBJ, H5dsid, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5OcopyRefsDatasettosameFile.H5Dcreate: ", dataset_id >= 0);
-            H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF_OBJ,
-                    HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    HDF5Constants.H5P_DEFAULT, dset_data);
-            //Close the dataset.
+            H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF_OBJ, HDF5Constants.H5S_ALL,
+                        HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
+            // Close the dataset.
             H5.H5Dclose(dataset_id);
         }
         catch (Exception ex) {
-            try {H5.H5Dclose(dataset_id);} catch (Exception exx) {}
+            try {
+                H5.H5Dclose(dataset_id);
+            }
+            catch (Exception exx) {
+            }
             fail("testH5OcopyRefsDatasettosameFile: create dataset failed");
         }
 
@@ -276,37 +333,50 @@ public class TestH5OcopyOld {
             H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
         }
         catch (Exception ex) {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception exx) {
+            }
             fail("testH5OcopyRefsDatasettosameFile: H5Pset_copy_object failed");
         }
 
-        //Perform copy function.
+        // Perform copy function.
         try {
             H5.H5Ocopy(H5fid, "DSREF", H5fid, "CPYREFD", ocp_plist_id, HDF5Constants.H5P_DEFAULT);
         }
-        catch(Exception ex) {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
+        catch (Exception ex) {
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception exx) {
+            }
             fail("testH5OcopyRefsDatasettosameFile: H5Ocopy failed");
         }
 
-        //Open the dataset that has been copied
+        // Open the dataset that has been copied
         try {
             did = H5.H5Dopen(H5fid, "DSREF", HDF5Constants.H5P_DEFAULT);
             assertTrue("testH5OcopyRefsDatasettosameFile.H5Dopen: ", did >= 0);
         }
         catch (Exception e) {
-            try {H5.H5Dclose(did);} catch (Exception exx) {}
+            try {
+                H5.H5Dclose(did);
+            }
+            catch (Exception exx) {
+            }
             e.printStackTrace();
             fail("testH5OcopyRefsDatasettosameFile: H5Dopen failed");
         }
 
         try {
-            //Read the dataset object references in the read_data buffer.
-            H5.H5Dread(did, HDF5Constants.H5T_STD_REF_OBJ, HDF5Constants.H5S_ALL,HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, read_data);
+            // Read the dataset object references in the read_data buffer.
+            H5.H5Dread(did, HDF5Constants.H5T_STD_REF_OBJ, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, read_data);
             System.arraycopy(read_data, 0, rbuf0, 0, 8);
             System.arraycopy(read_data, 8, rbuf1, 0, 8);
 
-            //Get the type of object the reference points to.
+            // Get the type of object the reference points to.
             obj_type = H5.H5Rget_obj_type(H5fid, HDF5Constants.H5R_OBJECT, rbuf1);
             assertEquals(obj_type, HDF5Constants.H5O_TYPE_DATASET);
 
@@ -317,22 +387,32 @@ public class TestH5OcopyOld {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Dclose(did);} catch (Exception ex) {}
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(did);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception ex) {
+            }
         }
-     }
-    
+    }
+
     @Test
-    public void testH5OcopyNullRef() throws Throwable {
+    public void testH5OcopyNullRef() throws Throwable
+    {
         final long _pid_ = HDF5Constants.H5P_DEFAULT;
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        long did = HDF5Constants.H5I_INVALID_HID;
-        long aid = HDF5Constants.H5I_INVALID_HID;
+        long sid         = HDF5Constants.H5I_INVALID_HID;
+        long did         = HDF5Constants.H5I_INVALID_HID;
+        long aid         = HDF5Constants.H5I_INVALID_HID;
 
         try {
             sid = H5.H5Screate_simple(1, new long[] {1}, null);
             assertTrue("testH5OcopyNullRef.H5Screate_simple: ", sid >= 0);
-            did = H5.H5Dcreate(H5fid, "Dataset_with_null_Ref", HDF5Constants.H5T_NATIVE_INT, sid, _pid_, _pid_, _pid_);
+            did = H5.H5Dcreate(H5fid, "Dataset_with_null_Ref", HDF5Constants.H5T_NATIVE_INT, sid, _pid_,
+                               _pid_, _pid_);
             assertTrue("testH5OcopyNullRef.H5Dcreate: ", did > 0);
             aid = H5.H5Acreate(did, "Null_Ref", HDF5Constants.H5T_STD_REF_OBJ, sid, _pid_, _pid_);
             assertTrue("testH5OcopyNullRef.H5Acreate: ", aid > 0);
@@ -341,57 +421,74 @@ public class TestH5OcopyOld {
             ex.printStackTrace();
         }
         finally {
-            try {H5.H5Dclose(did);} catch (Exception exx) {}
-            try {H5.H5Aclose(aid);} catch (Exception exx) {}
-            try {H5.H5Sclose(sid);} catch (Exception exx) {}
+            try {
+                H5.H5Dclose(did);
+            }
+            catch (Exception exx) {
+            }
+            try {
+                H5.H5Aclose(aid);
+            }
+            catch (Exception exx) {
+            }
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception exx) {
+            }
         }
 
         long ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
         assertTrue("testH5OcopyNullRef.H5Pcreate: ", ocp_plist_id >= 0);
         H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
         try {
-            H5.H5Ocopy(H5fid, "/Dataset_with_null_Ref", H5fid, "/Dataset_with_null_Ref_cp", ocp_plist_id, _pid_);
+            H5.H5Ocopy(H5fid, "/Dataset_with_null_Ref", H5fid, "/Dataset_with_null_Ref_cp", ocp_plist_id,
+                       _pid_);
         }
         finally {
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception exx) {
+            }
         }
     }
 
-//    @Ignore because of JIRA HDF5-9547
-//    @Test(expected = HDF5LibraryException.class)
-//    public void testH5OcopyInvalidRef() throws Throwable {
-//        final long _pid_ = HDF5Constants.H5P_DEFAULT;
-//        long sid = HDF5Constants.H5I_INVALID_HID;
-//        long did = HDF5Constants.H5I_INVALID_HID;
-//        long aid = HDF5Constants.H5I_INVALID_HID;
-//
-//        try {
-//            sid = H5.H5Screate_simple(1, new long[] {1}, null);
-//            assertTrue("testH5OcopyInvalidRef.H5Screate_simple: ", sid >= 0);
-//            did = H5.H5Dcreate(H5fid, "Dataset_with_invalid_Ref", HDF5Constants.H5T_NATIVE_INT, sid, _pid_, _pid_, _pid_);
-//            assertTrue("testH5OcopyInvalidRef.H5Dcreate: ", did > 0);
-//            aid = H5.H5Acreate(did, "Invalid_Ref", HDF5Constants.H5T_STD_REF_OBJ, sid, _pid_, _pid_);
-//            assertTrue("testH5OcopyInvalidRef.H5Acreate: ", aid > 0);
-//            H5.H5Awrite(aid, HDF5Constants.H5T_STD_REF_OBJ, new long[]{-1});
-//        }
-//        catch (Exception ex) {
-//            ex.printStackTrace();
-//        }
-//        finally {
-//            try {H5.H5Dclose(did);} catch (Exception exx) {}
-//            try {H5.H5Aclose(aid);} catch (Exception exx) {}
-//            try {H5.H5Sclose(sid);} catch (Exception exx) {}
-//        }
-//
-//        long ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
-//        assertTrue("testH5OcopyInvalidRef.H5Pcreate: ", ocp_plist_id >= 0);
-//        H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
-//        try {
-//            H5.H5Ocopy(H5fid, "/Dataset_with_invalid_Ref", H5fid, "/Dataset_with_invalid_Ref_cp", ocp_plist_id, _pid_);
-//        }
-//        finally {
-//            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
-//        }
-//    }
-
+    //    @Ignore because of JIRA HDF5-9547
+    //    @Test(expected = HDF5LibraryException.class)
+    //    public void testH5OcopyInvalidRef() throws Throwable {
+    //        final long _pid_ = HDF5Constants.H5P_DEFAULT;
+    //        long sid = HDF5Constants.H5I_INVALID_HID;
+    //        long did = HDF5Constants.H5I_INVALID_HID;
+    //        long aid = HDF5Constants.H5I_INVALID_HID;
+    //
+    //        try {
+    //            sid = H5.H5Screate_simple(1, new long[] {1}, null);
+    //            assertTrue("testH5OcopyInvalidRef.H5Screate_simple: ", sid >= 0);
+    //            did = H5.H5Dcreate(H5fid, "Dataset_with_invalid_Ref", HDF5Constants.H5T_NATIVE_INT, sid,
+    //            _pid_, _pid_, _pid_); assertTrue("testH5OcopyInvalidRef.H5Dcreate: ", did > 0); aid =
+    //            H5.H5Acreate(did, "Invalid_Ref", HDF5Constants.H5T_STD_REF_OBJ, sid, _pid_, _pid_);
+    //            assertTrue("testH5OcopyInvalidRef.H5Acreate: ", aid > 0);
+    //            H5.H5Awrite(aid, HDF5Constants.H5T_STD_REF_OBJ, new long[]{-1});
+    //        }
+    //        catch (Exception ex) {
+    //            ex.printStackTrace();
+    //        }
+    //        finally {
+    //            try {H5.H5Dclose(did);} catch (Exception exx) {}
+    //            try {H5.H5Aclose(aid);} catch (Exception exx) {}
+    //            try {H5.H5Sclose(sid);} catch (Exception exx) {}
+    //        }
+    //
+    //        long ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
+    //        assertTrue("testH5OcopyInvalidRef.H5Pcreate: ", ocp_plist_id >= 0);
+    //        H5.H5Pset_copy_object(ocp_plist_id, HDF5Constants.H5O_COPY_EXPAND_REFERENCE_FLAG);
+    //        try {
+    //            H5.H5Ocopy(H5fid, "/Dataset_with_invalid_Ref", H5fid, "/Dataset_with_invalid_Ref_cp",
+    //            ocp_plist_id, _pid_);
+    //        }
+    //        finally {
+    //            try {H5.H5Pclose(ocp_plist_id);} catch (Exception exx) {}
+    //        }
+    //    }
 }
diff --git a/java/test/TestH5Ocreate.java b/java/test/TestH5Ocreate.java
index 78ea744..096abcd 100644
--- a/java/test/TestH5Ocreate.java
+++ b/java/test/TestH5Ocreate.java
@@ -21,8 +21,8 @@ import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
-import hdf.hdf5lib.callbacks.H5O_iterate_t;
 import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t;
+import hdf.hdf5lib.callbacks.H5O_iterate_t;
 import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.structs.H5O_info_t;
@@ -35,21 +35,23 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Ocreate {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname               = new TestName();
     private static final String H5_EXTFILE = "h5ex_g_iterateO2.hdf";
-    private static final String H5_FILE = "testO.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long H5fcpl = HDF5Constants.H5I_INVALID_HID;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did1 = HDF5Constants.H5I_INVALID_HID;
-    long H5did2 = HDF5Constants.H5I_INVALID_HID;
-    long H5gcpl = HDF5Constants.H5I_INVALID_HID;
-    long H5gid = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-
-    private final void _deleteFile(String filename) {
+    private static final String H5_FILE    = "testO.h5";
+    private static final int DIM_X         = 4;
+    private static final int DIM_Y         = 6;
+    long H5fcpl                            = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                             = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                            = HDF5Constants.H5I_INVALID_HID;
+    long H5did1                            = HDF5Constants.H5I_INVALID_HID;
+    long H5did2                            = HDF5Constants.H5I_INVALID_HID;
+    long H5gcpl                            = HDF5Constants.H5I_INVALID_HID;
+    long H5gid                             = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                          = {DIM_X, DIM_Y};
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
@@ -62,39 +64,41 @@ public class TestH5Ocreate {
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Dcreate: " + err);
         }
-        assertTrue("TestH5O._createDataset: ",did > 0);
+        assertTrue("TestH5O._createDataset: ", did > 0);
 
         return did;
     }
 
-    private final long _createGroup(long fid, String name) {
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5gcpl = HDF5Constants.H5P_DEFAULT;
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                    H5gcpl, HDF5Constants.H5P_DEFAULT);
+            gid    = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, H5gcpl, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gcreate: " + err);
         }
-        assertTrue("TestH5O._createGroup: ",gid > 0);
+        assertTrue("TestH5O._createGroup: ", gid > 0);
 
         return gid;
     }
 
-    private final void _createHardLink(long fid, long cid, String curname, long did, String dstname, long lcpl, long lapl) {
+    private final void _createHardLink(long fid, long cid, String curname, long did, String dstname,
+                                       long lcpl, long lapl)
+    {
         boolean link_exists = false;
         try {
             H5.H5Lcreate_hard(cid, curname, did, dstname, lcpl, lapl);
@@ -108,7 +112,9 @@ public class TestH5Ocreate {
         assertTrue("TestH5O._createHardLink ", link_exists);
     }
 
-    private final void _createSoftLink(long fid, String curname, long did, String dstname, long lcpl, long lapl) {
+    private final void _createSoftLink(long fid, String curname, long did, String dstname, long lcpl,
+                                       long lapl)
+    {
         boolean link_exists = false;
         try {
             H5.H5Lcreate_soft(curname, did, dstname, lcpl, lapl);
@@ -122,7 +128,9 @@ public class TestH5Ocreate {
         assertTrue("TestH5O._createSoftLink ", link_exists);
     }
 
-    private final void _createExternalLink(long fid, String ext_filename, String curname, long did, String dstname, long lcpl, long lapl) {
+    private final void _createExternalLink(long fid, String ext_filename, String curname, long did,
+                                           String dstname, long lcpl, long lapl)
+    {
         boolean link_exists = false;
         try {
             H5.H5Lcreate_external(ext_filename, curname, did, dstname, lcpl, lapl);
@@ -137,64 +145,95 @@ public class TestH5Ocreate {
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         try {
             H5fcpl = H5.H5Pcreate(HDF5Constants.H5P_FILE_CREATE);
-            H5.H5Pset_link_creation_order(H5fcpl, HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    H5fcpl, HDF5Constants.H5P_DEFAULT);
+            H5.H5Pset_link_creation_order(H5fcpl, HDF5Constants.H5P_CRT_ORDER_TRACKED +
+                                                      HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, H5fcpl, HDF5Constants.H5P_DEFAULT);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
             H5did1 = _createDataset(H5fid, H5dsid, "DS1", HDF5Constants.H5P_DEFAULT);
-            H5gid = _createGroup(H5fid, "/G1");
+            H5gid  = _createGroup(H5fid, "/G1");
             H5did2 = _createDataset(H5gid, H5dsid, "DS2", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5O.createH5file: " + err);
         }
-        assertTrue("TestH5O.createH5file: H5.H5Fcreate: ",H5fid > 0);
-        assertTrue("TestH5O.createH5file: H5.H5Screate_simple: ",H5dsid > 0);
-        assertTrue("TestH5O.createH5file: H5.H5Gcreate: ",H5gid > 0);
+        assertTrue("TestH5O.createH5file: H5.H5Fcreate: ", H5fid > 0);
+        assertTrue("TestH5O.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
+        assertTrue("TestH5O.createH5file: H5.H5Gcreate: ", H5gid > 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5gid > 0)
-            try {H5.H5Gclose(H5gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(H5gid);
+            }
+            catch (Exception ex) {
+            }
         if (H5gcpl > 0)
-            try {H5.H5Pclose(H5gcpl);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5gcpl);
+            }
+            catch (Exception ex) {
+            }
         if (H5did2 > 0)
-            try {H5.H5Dclose(H5did2);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did2);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did1 > 0)
-            try {H5.H5Dclose(H5did1);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did1);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fcpl > 0)
-            try {H5.H5Pclose(H5fcpl);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5fcpl);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ocopy_cur_not_exists() throws Throwable {
+    public void testH5Ocopy_cur_not_exists() throws Throwable
+    {
         H5.H5Ocopy(H5fid, "None", H5fid, "DS1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Ocopy() {
+    public void testH5Ocopy()
+    {
         try {
             H5.H5Ocopy(H5fid, "DS1", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
             boolean link_exists = H5.H5Lexists(H5fid, "CPY1", HDF5Constants.H5P_DEFAULT);
-            assertTrue("testH5Ocopy:H5Lexists ",link_exists);
+            assertTrue("testH5Ocopy:H5Lexists ", link_exists);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -203,57 +242,66 @@ public class TestH5Ocreate {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ocopy_dst_link_exists() throws Throwable {
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+    public void testH5Ocopy_dst_link_exists() throws Throwable
+    {
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
         H5.H5Ocopy(H5fid, "CPY1", H5fid, "/G1/DS2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Oget_info_by_idx_n0_create() {
+    public void testH5Oget_info_by_idx_n0_create()
+    {
         H5O_info_t obj_info = null;
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info_by_idx_n0:H5Pget_link_creation_order " + err);
         }
         try {
-            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
+            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                             HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info_by_idx: " + err);
         }
-        assertFalse("H5Oget_info_by_idx ", obj_info==null);
-        assertTrue("H5Oget_info_by_idx link type", obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("H5Oget_info_by_idx ", obj_info == null);
+        assertTrue("H5Oget_info_by_idx link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
     }
 
     @Test
-    public void testH5Oget_info_by_idx_n1_create() {
+    public void testH5Oget_info_by_idx_n1_create()
+    {
         H5O_info_t obj_info = null;
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info_by_idx_n1:H5Pget_link_creation_order " + err);
         }
         try {
-            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT);
+            obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER,
+                                             HDF5Constants.H5_ITER_INC, 1, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Oget_info_by_idx: " + err);
         }
-        assertFalse("H5Oget_info_by_idx ", obj_info==null);
-        assertTrue("H5Oget_info_by_idx link type", obj_info.type==HDF5Constants.H5O_TYPE_GROUP);
+        assertFalse("H5Oget_info_by_idx ", obj_info == null);
+        assertTrue("H5Oget_info_by_idx link type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP);
     }
 
     @Test
-    public void testH5Oget_info_softlink() {
+    public void testH5Oget_info_softlink()
+    {
         H5O_info_t obj_info = null;
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         try {
@@ -263,21 +311,24 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info", obj_info==null);
-        assertTrue("H5Oget_info link type", obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("H5Oget_info", obj_info == null);
+        assertTrue("H5Oget_info link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
         assertTrue("Link Object Token", obj_info.token != null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_softlink_dangle() throws Throwable {
+    public void testH5Oget_info_softlink_dangle() throws Throwable
+    {
         _createSoftLink(H5fid, "DS3", H5fid, "L2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         H5.H5Oget_info_by_name(H5fid, "L2", HDF5Constants.H5P_DEFAULT);
     }
 
     @Test
-    public void testH5Oget_info_externallink() {
+    public void testH5Oget_info_externallink()
+    {
         H5O_info_t obj_info = null;
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "L1", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         try {
             obj_info = H5.H5Oget_info_by_name(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
         }
@@ -285,18 +336,19 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_info: " + err);
         }
-        assertFalse("H5Oget_info", obj_info==null);
-        assertTrue("H5Oget_info link type", obj_info.type==HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
+        assertFalse("H5Oget_info", obj_info == null);
+        assertTrue("H5Oget_info link type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
         assertTrue("Link Object Token", obj_info.token != null);
     }
 
     @Test
-    public void testH5Olink() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
-        H5O_info_t obj_info = null;
+    public void testH5Olink()
+    {
+        long oid                = HDF5Constants.H5I_INVALID_HID;
+        H5O_info_t obj_info     = null;
         H5O_info_t dst_obj_info = null;
         try {
-            oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
+            oid      = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
             obj_info = H5.H5Oget_info(oid);
         }
         catch (Throwable err) {
@@ -311,10 +363,14 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Olink: " + err);
         }
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
 
-        assertFalse("H5Oget_info ", obj_info==null);
-        assertTrue("H5Oget_info object type", obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("H5Oget_info ", obj_info == null);
+        assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
 
         try {
             dst_obj_info = H5.H5Oget_info_by_name(H5fid, "CPY1", HDF5Constants.H5P_DEFAULT);
@@ -323,29 +379,34 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_info_by_name: " + err);
         }
-        assertFalse("H5Oget_info ", dst_obj_info==null);
-        assertTrue("H5Oget_info object type", dst_obj_info.type==HDF5Constants.H5O_TYPE_DATASET);
+        assertFalse("H5Oget_info ", dst_obj_info == null);
+        assertTrue("H5Oget_info object type", dst_obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
     }
 
     @Test
-    public void testH5Ovisit_create() {
+    public void testH5Ovisit_create()
+    {
         try {
             int order = H5.H5Pget_link_creation_order(H5fcpl);
-            assertTrue("creation order :"+order, order == HDF5Constants.H5P_CRT_ORDER_TRACKED+HDF5Constants.H5P_CRT_ORDER_INDEXED);
+            assertTrue("creation order :" + order,
+                       order == HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Ovisit_create:H5Pget_link_creation_order " + err);
         }
 
-        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        _createHardLink(H5fid, H5fid, "/G1/DS2", H5fid, "CPY1", HDF5Constants.H5P_DEFAULT,
+                        HDF5Constants.H5P_DEFAULT);
+        _createExternalLink(H5fid, H5_EXTFILE, "DT1", H5fid, "LE", HDF5Constants.H5P_DEFAULT,
+                            HDF5Constants.H5P_DEFAULT);
         _createSoftLink(H5fid, "/G1/DS2", H5fid, "LS", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
 
         class idata {
             public String link_name = null;
-            public int link_type = -1;
-            idata(String name, int type) {
+            public int link_type    = -1;
+            idata(String name, int type)
+            {
                 this.link_name = name;
                 this.link_type = type;
             }
@@ -355,7 +416,8 @@ public class TestH5Ocreate {
         }
         H5O_iterate_opdata_t iter_data = new H5O_iter_data();
         class H5O_iter_callback implements H5O_iterate_t {
-            public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) {
+            public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data)
+            {
                 idata id = new idata(name, info.type);
                 ((H5O_iter_data)op_data).iterdata.add(id);
                 return 0;
@@ -363,23 +425,34 @@ public class TestH5Ocreate {
         }
         H5O_iterate_t iter_cb = new H5O_iter_callback();
         try {
-            H5.H5Ovisit(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, iter_cb, iter_data);
+            H5.H5Ovisit(H5fid, HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, iter_cb,
+                        iter_data);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Ovisit: " + err);
         }
         assertFalse("H5Ovisit ", ((H5O_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Ovisit "+((H5O_iter_data)iter_data).iterdata.size(), ((H5O_iter_data)iter_data).iterdata.size()==4);
-        assertTrue("H5Ovisit "+((idata)((H5O_iter_data)iter_data).iterdata.get(0)).link_name, ((idata)((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".")==0);
-        assertTrue("H5Ovisit "+((idata)((H5O_iter_data)iter_data).iterdata.get(1)).link_name, ((idata)((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS1")==0);
-        assertTrue("H5Ovisit "+((idata)((H5O_iter_data)iter_data).iterdata.get(2)).link_name, ((idata)((H5O_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1")==0);
-        assertTrue("H5Ovisit "+((idata)((H5O_iter_data)iter_data).iterdata.get(3)).link_name, ((idata)((H5O_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1/DS2")==0);
+        assertTrue("H5Ovisit " + ((H5O_iter_data)iter_data).iterdata.size(),
+                   ((H5O_iter_data)iter_data).iterdata.size() == 4);
+        assertTrue("H5Ovisit " + ((idata)((H5O_iter_data)iter_data).iterdata.get(0)).link_name,
+                   ((idata)((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") ==
+                       0);
+        assertTrue("H5Ovisit " + ((idata)((H5O_iter_data)iter_data).iterdata.get(1)).link_name,
+                   ((idata)((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS1") ==
+                       0);
+        assertTrue("H5Ovisit " + ((idata)((H5O_iter_data)iter_data).iterdata.get(2)).link_name,
+                   ((idata)((H5O_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1") ==
+                       0);
+        assertTrue(
+            "H5Ovisit " + ((idata)((H5O_iter_data)iter_data).iterdata.get(3)).link_name,
+            ((idata)((H5O_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1/DS2") == 0);
     }
 
     @Test
-    public void testH5Ocomment() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Ocomment()
+    {
+        long oid           = HDF5Constants.H5I_INVALID_HID;
         String obj_comment = null;
         try {
             oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
@@ -397,14 +470,19 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_comment: " + err);
         }
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
-        assertFalse("H5Oget_comment: ", obj_comment==null);
-        assertTrue("H5Oget_comment: ", obj_comment.compareTo("Test Comment")==0);
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
+        assertFalse("H5Oget_comment: ", obj_comment == null);
+        assertTrue("H5Oget_comment: ", obj_comment.compareTo("Test Comment") == 0);
     }
 
     @Test
-    public void testH5Ocomment_clear() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Ocomment_clear()
+    {
+        long oid           = HDF5Constants.H5I_INVALID_HID;
         String obj_comment = null;
         try {
             oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
@@ -422,8 +500,8 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_comment: " + err);
         }
-        assertFalse("H5Oget_comment: ", obj_comment==null);
-        assertTrue("H5Oget_comment: ", obj_comment.compareTo("Test Comment")==0);
+        assertFalse("H5Oget_comment: ", obj_comment == null);
+        assertTrue("H5Oget_comment: ", obj_comment.compareTo("Test Comment") == 0);
         try {
             H5.H5Oset_comment(oid, null);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -439,12 +517,17 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_comment: " + err);
         }
-        try {H5.H5Oclose(oid);} catch (Exception ex) {}
-        assertTrue("H5Oget_comment: ", obj_comment==null);
+        try {
+            H5.H5Oclose(oid);
+        }
+        catch (Exception ex) {
+        }
+        assertTrue("H5Oget_comment: ", obj_comment == null);
     }
 
     @Test
-    public void testH5Ocomment_by_name() {
+    public void testH5Ocomment_by_name()
+    {
         String obj_comment = null;
         try {
             H5.H5Oset_comment_by_name(H5fid, "DS1", "Test Comment", HDF5Constants.H5P_DEFAULT);
@@ -461,12 +544,13 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_comment_by_name: " + err);
         }
-        assertFalse("H5Oget_comment_by_name: ", obj_comment==null);
-        assertTrue("H5Oget_comment_by_name: ", obj_comment.compareTo("Test Comment")==0);
+        assertFalse("H5Oget_comment_by_name: ", obj_comment == null);
+        assertTrue("H5Oget_comment_by_name: ", obj_comment.compareTo("Test Comment") == 0);
     }
 
     @Test
-    public void testH5Ocomment_by_name_clear() {
+    public void testH5Ocomment_by_name_clear()
+    {
         String obj_comment = null;
         try {
             H5.H5Oset_comment_by_name(H5fid, "DS1", "Test Comment", HDF5Constants.H5P_DEFAULT);
@@ -483,8 +567,8 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_comment_by_name: " + err);
         }
-        assertFalse("H5Oget_comment_by_name: ", obj_comment==null);
-        assertTrue("H5Oget_comment_by_name: ", obj_comment.compareTo("Test Comment")==0);
+        assertFalse("H5Oget_comment_by_name: ", obj_comment == null);
+        assertTrue("H5Oget_comment_by_name: ", obj_comment.compareTo("Test Comment") == 0);
         try {
             H5.H5Oset_comment_by_name(H5fid, "DS1", null, HDF5Constants.H5P_DEFAULT);
             H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
@@ -500,19 +584,20 @@ public class TestH5Ocreate {
             err.printStackTrace();
             fail("H5.H5Oget_comment_by_name: " + err);
         }
-        assertTrue("H5Oget_comment_by_name: ", obj_comment==null);
+        assertTrue("H5Oget_comment_by_name: ", obj_comment == null);
     }
 
     @Test
-    public void testH5Oinc_dec_count() {
-        long oid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Oinc_dec_count()
+    {
+        long oid            = HDF5Constants.H5I_INVALID_HID;
         H5O_info_t obj_info = null;
         try {
             try {
-                oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
+                oid      = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
                 obj_info = H5.H5Oget_info(oid);
-                assertFalse("testH5Oinc_dec_count: H5Oget_info ",obj_info==null);
-                assertTrue("testH5Oinc_dec_count: H5Oget_info reference count",obj_info.rc==1);
+                assertFalse("testH5Oinc_dec_count: H5Oget_info ", obj_info == null);
+                assertTrue("testH5Oinc_dec_count: H5Oget_info reference count", obj_info.rc == 1);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -527,8 +612,8 @@ public class TestH5Ocreate {
             }
             try {
                 obj_info = H5.H5Oget_info(oid);
-                assertFalse("testH5Oinc_dec_count: H5Oget_info ",obj_info==null);
-                assertTrue("testH5Oinc_dec_count: H5Oget_info reference count",obj_info.rc==2);
+                assertFalse("testH5Oinc_dec_count: H5Oget_info ", obj_info == null);
+                assertTrue("testH5Oinc_dec_count: H5Oget_info reference count", obj_info.rc == 2);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -543,8 +628,8 @@ public class TestH5Ocreate {
             }
             try {
                 obj_info = H5.H5Oget_info(oid);
-                assertFalse("testH5Oinc_dec_count: H5Oget_info ",obj_info==null);
-                assertTrue("testH5Oinc_dec_count: H5Oget_info reference count",obj_info.rc==1);
+                assertFalse("testH5Oinc_dec_count: H5Oget_info ", obj_info == null);
+                assertTrue("testH5Oinc_dec_count: H5Oget_info reference count", obj_info.rc == 1);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -552,12 +637,17 @@ public class TestH5Ocreate {
             }
         }
         finally {
-            try{H5.H5Oclose(oid);} catch (Exception ex) {}
+            try {
+                H5.H5Oclose(oid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Ocork() {
+    public void testH5Ocork()
+    {
         boolean corked = false;
 
         // Check cork status of the group: not corked
@@ -608,5 +698,4 @@ public class TestH5Ocreate {
         }
         assertFalse("H5Oare_mdc_flushes_disabled: ", corked);
     }
-
 }
diff --git a/java/test/TestH5Oparams.java b/java/test/TestH5Oparams.java
index 5cbabe1..280e9fd 100644
--- a/java/test/TestH5Oparams.java
+++ b/java/test/TestH5Oparams.java
@@ -13,6 +13,7 @@
 package test;
 
 import static org.junit.Assert.assertTrue;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
@@ -25,177 +26,211 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Oparams {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
-    @Test//(expected = HDF5LibraryException.class)
-    public void testH5Oclose_invalid() throws Throwable {
+    @Test //(expected = HDF5LibraryException.class)
+    public void testH5Oclose_invalid() throws Throwable
+    {
         long oid = H5.H5Oclose(-1);
         assertTrue(oid == 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oopen_null() throws Throwable {
+    public void testH5Oopen_null() throws Throwable
+    {
         H5.H5Oopen(-1, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oopen_invalid() throws Throwable {
+    public void testH5Oopen_invalid() throws Throwable
+    {
         H5.H5Oopen(-1, "Bogus", 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Ocopy_invalid() throws Throwable {
+    public void testH5Ocopy_invalid() throws Throwable
+    {
         H5.H5Ocopy(-1, "Bogus", -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ocopy_null_current() throws Throwable {
+    public void testH5Ocopy_null_current() throws Throwable
+    {
         H5.H5Ocopy(-1, null, 0, "Bogus", 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ocopy_null_dest() throws Throwable {
+    public void testH5Ocopy_null_dest() throws Throwable
+    {
         H5.H5Ocopy(-1, "Bogus", 0, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_invalid() throws Throwable {
+    public void testH5Oget_info_invalid() throws Throwable
+    {
         H5.H5Oget_info(-1, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oget_info_by_name_null() throws Throwable {
+    public void testH5Oget_info_by_name_null() throws Throwable
+    {
         H5.H5Oget_info_by_name(-1, null, 0, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_name_invalid() throws Throwable {
+    public void testH5Oget_info_by_name_invalid() throws Throwable
+    {
         H5.H5Oget_info_by_name(-1, "/testH5Gcreate", 0, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_info_by_idx_invalid() throws Throwable {
+    public void testH5Oget_info_by_idx_invalid() throws Throwable
+    {
         H5.H5Oget_info_by_idx(-1, "Bogus", -1, -1, -1L, 0, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oget_info_by_idx_null() throws Throwable {
+    public void testH5Oget_info_by_idx_null() throws Throwable
+    {
         H5.H5Oget_info_by_idx(-1, null, 0, 0, 0L, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_invalid() throws Throwable {
+    public void testH5Oget_native_info_invalid() throws Throwable
+    {
         H5.H5Oget_native_info(-1, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oget_native_info_by_name_null() throws Throwable {
+    public void testH5Oget_native_info_by_name_null() throws Throwable
+    {
         H5.H5Oget_native_info_by_name(-1, null, 0, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_name_invalid() throws Throwable {
+    public void testH5Oget_native_info_by_name_invalid() throws Throwable
+    {
         H5.H5Oget_native_info_by_name(-1, "/testH5Gcreate", 0, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_native_info_by_idx_invalid() throws Throwable {
+    public void testH5Oget_native_info_by_idx_invalid() throws Throwable
+    {
         H5.H5Oget_native_info_by_idx(-1, "Bogus", -1, -1, -1L, 0, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oget_native_info_by_idx_null() throws Throwable {
+    public void testH5Oget_native_info_by_idx_null() throws Throwable
+    {
         H5.H5Oget_native_info_by_idx(-1, null, 0, 0, 0L, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Olink_invalid() throws Throwable {
+    public void testH5Olink_invalid() throws Throwable
+    {
         H5.H5Olink(-1, -1, "Bogus", -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Olink_null_dest() throws Throwable {
+    public void testH5Olink_null_dest() throws Throwable
+    {
         H5.H5Olink(-1, 0, null, 0, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ovisit_null() throws Throwable {
+    public void testH5Ovisit_null() throws Throwable
+    {
         H5.H5Ovisit(-1, -1, -1, null, null, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ovisit_by_name_nullname() throws Throwable {
+    public void testH5Ovisit_by_name_nullname() throws Throwable
+    {
         H5.H5Ovisit_by_name(-1, null, -1, -1, null, null, 0, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Ovisit_by_name_null() throws Throwable {
+    public void testH5Ovisit_by_name_null() throws Throwable
+    {
         H5.H5Ovisit_by_name(-1, "Bogus", -1, -1, null, null, 0, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oset_comment_invalid() throws Throwable {
+    public void testH5Oset_comment_invalid() throws Throwable
+    {
         H5.H5Oset_comment(-1, "Bogus");
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_comment_invalid() throws Throwable {
+    public void testH5Oget_comment_invalid() throws Throwable
+    {
         H5.H5Oget_comment(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oset_comment_by_name_invalid() throws Throwable {
+    public void testH5Oset_comment_by_name_invalid() throws Throwable
+    {
         H5.H5Oset_comment_by_name(-1, "Bogus", null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oset_comment_by_name_null() throws Throwable {
+    public void testH5Oset_comment_by_name_null() throws Throwable
+    {
         H5.H5Oset_comment_by_name(-1, null, null, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oget_comment_by_name_invalid() throws Throwable {
+    public void testH5Oget_comment_by_name_invalid() throws Throwable
+    {
         H5.H5Oget_comment_by_name(-1, "Bogus", -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Oget_comment_by_name_null() throws Throwable {
+    public void testH5Oget_comment_by_name_null() throws Throwable
+    {
         H5.H5Oget_comment_by_name(-1, null, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oflush_invalid() throws Throwable {
+    public void testH5Oflush_invalid() throws Throwable
+    {
         H5.H5Oflush(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Orefresh_invalid() throws Throwable {
+    public void testH5Orefresh_invalid() throws Throwable
+    {
         H5.H5Orefresh(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Odisable_mdc_flushes() throws Throwable {
+    public void testH5Odisable_mdc_flushes() throws Throwable
+    {
         H5.H5Odisable_mdc_flushes(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oenable_mdc_flushes() throws Throwable {
+    public void testH5Oenable_mdc_flushes() throws Throwable
+    {
         H5.H5Oenable_mdc_flushes(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Oare_mdc_flushes_disabled() throws Throwable {
+    public void testH5Oare_mdc_flushes_disabled() throws Throwable
+    {
         H5.H5Oare_mdc_flushes_disabled(-1);
     }
-
 }
diff --git a/java/test/TestH5P.java b/java/test/TestH5P.java
index 6ae93d9..0571e3f 100644
--- a/java/test/TestH5P.java
+++ b/java/test/TestH5P.java
@@ -34,40 +34,47 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5P {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     private static final String H5_FILE = "testP.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long[] H5dims = { DIM_X, DIM_Y };
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long lapl_id = HDF5Constants.H5I_INVALID_HID;
-    long fapl_id = HDF5Constants.H5I_INVALID_HID;
-    long fcpl_id = HDF5Constants.H5I_INVALID_HID;
-    long ocpl_id = HDF5Constants.H5I_INVALID_HID;
-    long ocp_plist_id = HDF5Constants.H5I_INVALID_HID;
-    long lcpl_id = HDF5Constants.H5I_INVALID_HID;
-    long plapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plist_id = HDF5Constants.H5I_INVALID_HID;
-    long gapl_id = HDF5Constants.H5I_INVALID_HID;
-    long gcpl_id = HDF5Constants.H5I_INVALID_HID;
-    long acpl_id = HDF5Constants.H5I_INVALID_HID;
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X      = 4;
+    private static final int DIM_Y      = 6;
+    long[] H5dims                       = {DIM_X, DIM_Y};
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5did                          = HDF5Constants.H5I_INVALID_HID;
+    long lapl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long fapl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long fcpl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long ocpl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long ocp_plist_id                   = HDF5Constants.H5I_INVALID_HID;
+    long lcpl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long plapl_id                       = HDF5Constants.H5I_INVALID_HID;
+    long plist_id                       = HDF5Constants.H5I_INVALID_HID;
+    long gapl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long gcpl_id                        = HDF5Constants.H5I_INVALID_HID;
+    long acpl_id                        = HDF5Constants.H5I_INVALID_HID;
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -78,12 +85,12 @@ public class TestH5P {
         return did;
     }
 
-    private final void _createH5File(long fcpl, long fapl) {
+    private final void _createH5File(long fcpl, long fapl)
+    {
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    fcpl, fapl);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, fcpl, fapl);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
-            H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+            H5did  = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -101,28 +108,26 @@ public class TestH5P {
         }
     }
 
-    public void deleteH5file() throws HDF5LibraryException {
-        _deleteFile(H5_FILE);
-    }
+    public void deleteH5file() throws HDF5LibraryException { _deleteFile(H5_FILE); }
 
     @Before
-    public void createH5fileProperties()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5fileProperties() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            lapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
-            fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
-            fcpl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_CREATE);
-            ocpl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE);
+            lapl_id      = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
+            fapl_id      = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
+            fcpl_id      = H5.H5Pcreate(HDF5Constants.H5P_FILE_CREATE);
+            ocpl_id      = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE);
             ocp_plist_id = H5.H5Pcreate(HDF5Constants.H5P_OBJECT_COPY);
-            lcpl_id = H5.H5Pcreate(HDF5Constants.H5P_LINK_CREATE);
-            plapl_id = H5.H5Pcreate(HDF5Constants.H5P_LINK_ACCESS);
-            plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
-            gapl_id = H5.H5Pcreate(HDF5Constants.H5P_GROUP_ACCESS);
-            gcpl_id = H5.H5Pcreate(HDF5Constants.H5P_GROUP_CREATE);
-            acpl_id = H5.H5Pcreate(HDF5Constants.H5P_ATTRIBUTE_CREATE);
+            lcpl_id      = H5.H5Pcreate(HDF5Constants.H5P_LINK_CREATE);
+            plapl_id     = H5.H5Pcreate(HDF5Constants.H5P_LINK_ACCESS);
+            plist_id     = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+            gapl_id      = H5.H5Pcreate(HDF5Constants.H5P_GROUP_ACCESS);
+            gcpl_id      = H5.H5Pcreate(HDF5Constants.H5P_GROUP_CREATE);
+            acpl_id      = H5.H5Pcreate(HDF5Constants.H5P_ATTRIBUTE_CREATE);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -134,51 +139,109 @@ public class TestH5P {
         assertTrue(ocpl_id > 0);
         assertTrue(ocp_plist_id > 0);
         assertTrue(lcpl_id > 0);
-        assertTrue(plapl_id>0);
+        assertTrue(plapl_id > 0);
         assertTrue(plist_id > 0);
         assertTrue(gapl_id > 0);
-        assertTrue(gcpl_id >0);
-        assertTrue(acpl_id >0);
+        assertTrue(gcpl_id > 0);
+        assertTrue(acpl_id > 0);
     }
 
     @After
-    public void deleteH5fileProperties() throws HDF5LibraryException {
-        if (lapl_id >0)
-            try {H5.H5Pclose(lapl_id);} catch (Exception ex) {}
-        if (fapl_id >0)
-            try {H5.H5Pclose(fapl_id);} catch (Exception ex) {}
-        if (fcpl_id >0)
-            try {H5.H5Pclose(fcpl_id);} catch (Exception ex) {}
-        if (ocpl_id >0)
-            try {H5.H5Pclose(ocpl_id);} catch (Exception ex) {}
-        if (ocp_plist_id >0)
-            try {H5.H5Pclose(ocp_plist_id);} catch (Exception ex) {}
-        if (lcpl_id >0)
-            try {H5.H5Pclose(lcpl_id);} catch (Exception ex) {}
-        if (plapl_id >0)
-            try {H5.H5Pclose(plapl_id);} catch (Exception ex) {}
-        if (plist_id >0)
-            try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
-        if (gapl_id >0)
-            try {H5.H5Pclose(gapl_id);} catch (Exception ex) {}
-        if (gcpl_id >0)
-            try {H5.H5Pclose(gcpl_id);} catch (Exception ex) {}
-        if (acpl_id >0)
-            try {H5.H5Pclose(acpl_id);} catch (Exception ex) {}
+    public void deleteH5fileProperties() throws HDF5LibraryException
+    {
+        if (lapl_id > 0)
+            try {
+                H5.H5Pclose(lapl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (fapl_id > 0)
+            try {
+                H5.H5Pclose(fapl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (fcpl_id > 0)
+            try {
+                H5.H5Pclose(fcpl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (ocpl_id > 0)
+            try {
+                H5.H5Pclose(ocpl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (ocp_plist_id > 0)
+            try {
+                H5.H5Pclose(ocp_plist_id);
+            }
+            catch (Exception ex) {
+            }
+        if (lcpl_id > 0)
+            try {
+                H5.H5Pclose(lcpl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (plapl_id > 0)
+            try {
+                H5.H5Pclose(plapl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (plist_id > 0)
+            try {
+                H5.H5Pclose(plist_id);
+            }
+            catch (Exception ex) {
+            }
+        if (gapl_id > 0)
+            try {
+                H5.H5Pclose(gapl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (gcpl_id > 0)
+            try {
+                H5.H5Pclose(gcpl_id);
+            }
+            catch (Exception ex) {
+            }
+        if (acpl_id > 0)
+            try {
+                H5.H5Pclose(acpl_id);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did > 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
     @Test
-    public void testH5Pget_nlinks() {
+    public void testH5Pget_nlinks()
+    {
         long nlinks = -1;
         try {
-            nlinks = (long) H5.H5Pget_nlinks(lapl_id);
+            nlinks = (long)H5.H5Pget_nlinks(lapl_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -190,12 +253,13 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_nlinks() {
+    public void testH5Pset_nlinks()
+    {
         long nlinks = 20;
         int ret_val = -1;
         try {
             ret_val = H5.H5Pset_nlinks(lapl_id, nlinks);
-            nlinks = (long) H5.H5Pget_nlinks(lapl_id);
+            nlinks  = (long)H5.H5Pget_nlinks(lapl_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -207,17 +271,22 @@ public class TestH5P {
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Pset_libver_bounds_invalidlow() throws Throwable {
-        H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST+1, HDF5Constants.H5F_LIBVER_LATEST);
+    public void testH5Pset_libver_bounds_invalidlow() throws Throwable
+    {
+        H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST + 1,
+                                HDF5Constants.H5F_LIBVER_LATEST);
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Pset_libver_bounds_invalidhigh() throws Throwable {
-        H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST+1);
+    public void testH5Pset_libver_bounds_invalidhigh() throws Throwable
+    {
+        H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST,
+                                HDF5Constants.H5F_LIBVER_LATEST + 1);
     }
 
     @Test
-    public void testH5Pget_link_creation_order() {
+    public void testH5Pget_link_creation_order()
+    {
         int crt_order_flags = 0;
         try {
             crt_order_flags = H5.H5Pget_link_creation_order(fcpl_id);
@@ -230,47 +299,51 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_link_creation_order_trackedPLUSindexed() {
-        int ret_val = -1;
+    public void testH5Pset_link_creation_order_trackedPLUSindexed()
+    {
+        int ret_val         = -1;
         int crt_order_flags = HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED;
-        int crtorderflags = 0;
+        int crtorderflags   = 0;
 
         try {
-            ret_val = H5.H5Pset_link_creation_order(fcpl_id, crt_order_flags);
+            ret_val       = H5.H5Pset_link_creation_order(fcpl_id, crt_order_flags);
             crtorderflags = H5.H5Pget_link_creation_order(fcpl_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pset_link_creation_order: " + err);
         }
-        assertTrue("testH5Pset_link_creation_order_trackedPLUSindexed",ret_val >= 0);
+        assertTrue("testH5Pset_link_creation_order_trackedPLUSindexed", ret_val >= 0);
         assertEquals(crt_order_flags, crtorderflags);
     }
 
     @Test
-    public void testH5Pset_link_creation_order_tracked() {
-        int ret_val = -1;
+    public void testH5Pset_link_creation_order_tracked()
+    {
+        int ret_val       = -1;
         int crtorderflags = 0;
 
         try {
-            ret_val = H5.H5Pset_link_creation_order(fcpl_id, HDF5Constants.H5P_CRT_ORDER_TRACKED);
+            ret_val       = H5.H5Pset_link_creation_order(fcpl_id, HDF5Constants.H5P_CRT_ORDER_TRACKED);
             crtorderflags = H5.H5Pget_link_creation_order(fcpl_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pset_link_creation_order: " + err);
         }
-        assertTrue("testH5Pset_link_creation_order_tracked",ret_val >= 0);
+        assertTrue("testH5Pset_link_creation_order_tracked", ret_val >= 0);
         assertEquals(HDF5Constants.H5P_CRT_ORDER_TRACKED, crtorderflags);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_link_creation_order_invalidvalue() throws Throwable {
+    public void testH5Pset_link_creation_order_invalidvalue() throws Throwable
+    {
         H5.H5Pset_link_creation_order(fcpl_id, HDF5Constants.H5P_CRT_ORDER_INDEXED);
     }
 
     @Test
-    public void testH5Pget_attr_creation_order() {
+    public void testH5Pget_attr_creation_order()
+    {
         int crt_order_flags = 0;
 
         try {
@@ -284,13 +357,14 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_attr_creation_order_trackedPLUSindexed() {
-        int ret_val = -1;
+    public void testH5Pset_attr_creation_order_trackedPLUSindexed()
+    {
+        int ret_val         = -1;
         int crt_order_flags = HDF5Constants.H5P_CRT_ORDER_TRACKED + HDF5Constants.H5P_CRT_ORDER_INDEXED;
-        int crtorderflags = 0;
+        int crtorderflags   = 0;
 
         try {
-            ret_val = H5.H5Pset_attr_creation_order(ocpl_id, crt_order_flags);
+            ret_val       = H5.H5Pset_attr_creation_order(ocpl_id, crt_order_flags);
             crtorderflags = H5.H5Pget_attr_creation_order(ocpl_id);
         }
         catch (Throwable err) {
@@ -302,12 +376,13 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_attr_creation_order_tracked() {
-        int ret_val = -1;
+    public void testH5Pset_attr_creation_order_tracked()
+    {
+        int ret_val       = -1;
         int crtorderflags = 0;
 
         try {
-            ret_val = H5.H5Pset_attr_creation_order(ocpl_id, HDF5Constants.H5P_CRT_ORDER_TRACKED);
+            ret_val       = H5.H5Pset_attr_creation_order(ocpl_id, HDF5Constants.H5P_CRT_ORDER_TRACKED);
             crtorderflags = H5.H5Pget_attr_creation_order(ocpl_id);
         }
         catch (Throwable err) {
@@ -319,12 +394,14 @@ public class TestH5P {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_attr_creation_order_invalidvalue() throws Throwable {
+    public void testH5Pset_attr_creation_order_invalidvalue() throws Throwable
+    {
         H5.H5Pset_attr_creation_order(ocpl_id, HDF5Constants.H5P_CRT_ORDER_INDEXED);
     }
 
     @Test
-    public void testH5Pset_copy_object() {
+    public void testH5Pset_copy_object()
+    {
 
         int cpy_option = -1;
 
@@ -350,12 +427,14 @@ public class TestH5P {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_copy_object_invalidobject() throws Throwable {
+    public void testH5Pset_copy_object_invalidobject() throws Throwable
+    {
         H5.H5Pset_copy_object(HDF5Constants.H5P_DEFAULT, HDF5Constants.H5O_COPY_SHALLOW_HIERARCHY_FLAG);
     }
 
     @Test
-    public void testH5Pset_create_intermediate_group() {
+    public void testH5Pset_create_intermediate_group()
+    {
 
         int ret_val = -1;
         try {
@@ -365,16 +444,18 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pset_create_intermediate_group: " + err);
         }
-        assertTrue(ret_val>=0);
+        assertTrue(ret_val >= 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_create_intermediate_group_invalidobject() throws Throwable {
+    public void testH5Pset_create_intermediate_group_invalidobject() throws Throwable
+    {
         H5.H5Pset_create_intermediate_group(ocp_plist_id, true);
     }
 
     @Test
-    public void testH5Pget_create_intermediate_group() {
+    public void testH5Pget_create_intermediate_group()
+    {
         boolean flag = false;
         try {
             H5.H5Pset_create_intermediate_group(lcpl_id, true);
@@ -388,7 +469,8 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pget_create_intermediate_group_notcreated() {
+    public void testH5Pget_create_intermediate_group_notcreated()
+    {
         boolean flag = true;
         try {
             flag = H5.H5Pget_create_intermediate_group(lcpl_id);
@@ -401,43 +483,48 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_data_transform() {
+    public void testH5Pset_data_transform()
+    {
 
         String expression = "(5/9.0)*(x-32)";
-        int ret_val = -1;
+        int ret_val       = -1;
 
         try {
-            ret_val= H5.H5Pset_data_transform(plist_id, expression);
+            ret_val = H5.H5Pset_data_transform(plist_id, expression);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pset_data_transform: " + err);
         }
-        assertTrue(ret_val>=0);
+        assertTrue(ret_val >= 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pset_data_transform_NullExpression() throws Throwable {
+    public void testH5Pset_data_transform_NullExpression() throws Throwable
+    {
         H5.H5Pset_data_transform(plist_id, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_data_transform_InvalidExpression1() throws Throwable {
+    public void testH5Pset_data_transform_InvalidExpression1() throws Throwable
+    {
         H5.H5Pset_data_transform(plist_id, "");
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_data_transform_InvalidExpression2() throws Throwable {
+    public void testH5Pset_data_transform_InvalidExpression2() throws Throwable
+    {
         H5.H5Pset_data_transform(plist_id, "hello");
     }
 
     @Test
-    public void testH5Pget_data_transform() {
+    public void testH5Pget_data_transform()
+    {
 
         String expression = "(5/9.0)*(x-32)";
-        String [] express = {""};
+        String[] express  = {""};
         long express_size = 0;
-        long size = 20;
+        long size         = 20;
 
         try {
             H5.H5Pset_data_transform(plist_id, expression);
@@ -447,25 +534,28 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pget_data_transform: " + err);
         }
-        assertTrue(express_size>=0);
+        assertTrue(express_size >= 0);
         assertTrue("The data transform expression: ", expression.equals(express[0]));
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pget_data_transform_ExpressionNotSet() throws Throwable {
-        String [] express = {""};
+    public void testH5Pget_data_transform_ExpressionNotSet() throws Throwable
+    {
+        String[] express = {""};
         H5.H5Pget_data_transform(plist_id, express, 20);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pget_data_transform_IllegalSize() throws Throwable {
-        String [] express = {""};
+    public void testH5Pget_data_transform_IllegalSize() throws Throwable
+    {
+        String[] express = {""};
         H5.H5Pset_data_transform(plist_id, "(5/9.0)*(x-32)");
         H5.H5Pget_data_transform(plist_id, express, 0);
     }
 
     @Test
-    public void testH5Pget_elink_acc_flags() {
+    public void testH5Pget_elink_acc_flags()
+    {
 
         int get_flags = -1;
         try {
@@ -480,12 +570,13 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_elink_acc_flags() {
+    public void testH5Pset_elink_acc_flags()
+    {
 
         int get_flags = -1;
-        int ret_val = -1;
+        int ret_val   = -1;
         try {
-            ret_val = H5.H5Pset_elink_acc_flags(lapl_id, HDF5Constants.H5F_ACC_RDWR);
+            ret_val   = H5.H5Pset_elink_acc_flags(lapl_id, HDF5Constants.H5F_ACC_RDWR);
             get_flags = H5.H5Pget_elink_acc_flags(lapl_id);
         }
         catch (Throwable err) {
@@ -497,21 +588,24 @@ public class TestH5P {
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Pset_elink_acc_flags_InvalidFlag1() throws Throwable {
+    public void testH5Pset_elink_acc_flags_InvalidFlag1() throws Throwable
+    {
         H5.H5Pset_elink_acc_flags(lapl_id, HDF5Constants.H5F_ACC_TRUNC);
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Pset_elink_acc_flags_InvalidFlag2() throws Throwable {
+    public void testH5Pset_elink_acc_flags_InvalidFlag2() throws Throwable
+    {
         H5.H5Pset_elink_acc_flags(lapl_id, -1);
     }
 
     @Test
-    public void testH5Pset_link_phase_change() {
+    public void testH5Pset_link_phase_change()
+    {
 
         int ret_val = -1;
         try {
-            ret_val = H5.H5Pset_link_phase_change(fcpl_id , 2, 2);
+            ret_val = H5.H5Pset_link_phase_change(fcpl_id, 2, 2);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -521,17 +615,20 @@ public class TestH5P {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_link_phase_change_Highmax_Compact() throws Throwable {
-        H5.H5Pset_link_phase_change(fcpl_id , 70000000, 3);
+    public void testH5Pset_link_phase_change_Highmax_Compact() throws Throwable
+    {
+        H5.H5Pset_link_phase_change(fcpl_id, 70000000, 3);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_link_phase_change_max_compactLESSTHANmin_dense() throws Throwable {
-        H5.H5Pset_link_phase_change(fcpl_id , 5, 6);
+    public void testH5Pset_link_phase_change_max_compactLESSTHANmin_dense() throws Throwable
+    {
+        H5.H5Pset_link_phase_change(fcpl_id, 5, 6);
     }
 
     @Test
-    public void testH5Pget_link_phase_change() {
+    public void testH5Pget_link_phase_change()
+    {
         int ret_val = -1;
         int[] links = new int[2];
 
@@ -548,10 +645,11 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pget_link_phase_change_EqualsSet() {
+    public void testH5Pget_link_phase_change_EqualsSet()
+    {
         int[] links = new int[2];
         try {
-            H5.H5Pset_link_phase_change(fcpl_id , 10, 7);
+            H5.H5Pset_link_phase_change(fcpl_id, 10, 7);
             H5.H5Pget_link_phase_change(fcpl_id, links);
         }
         catch (Throwable err) {
@@ -563,13 +661,15 @@ public class TestH5P {
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pget_link_phase_change_Null() throws Throwable {
+    public void testH5Pget_link_phase_change_Null() throws Throwable
+    {
         H5.H5Pget_link_phase_change(fcpl_id, null);
     }
 
     @Test
-    public void testH5Pget_attr_phase_change() {
-        int ret_val = -1;
+    public void testH5Pget_attr_phase_change()
+    {
+        int ret_val      = -1;
         int[] attributes = new int[2];
 
         try {
@@ -580,7 +680,8 @@ public class TestH5P {
             fail("H5Pget_attr_phase_change: " + err);
         }
         assertTrue("testH5Pget_attr_phase_change", ret_val >= 0);
-        assertEquals("Default value of the max. no. of attributes stored in compact storage", 8, attributes[0]);
+        assertEquals("Default value of the max. no. of attributes stored in compact storage", 8,
+                     attributes[0]);
         assertEquals("Default value of the min. no. of attributes stored in dense storage", 6, attributes[1]);
         try {
             H5.H5Pset_attr_phase_change(ocpl_id, 9, 5);
@@ -597,14 +698,16 @@ public class TestH5P {
             fail("H5Pget_attr_phase_change: " + err);
         }
         assertTrue("testH5Pget_attr_phase_change", ret_val >= 0);
-        assertEquals("Default value of the max. no. of attributes stored in compact storage", 9, attributes[0]);
+        assertEquals("Default value of the max. no. of attributes stored in compact storage", 9,
+                     attributes[0]);
         assertEquals("Default value of the min. no. of attributes stored in dense storage", 5, attributes[1]);
     }
 
     @Test
-    public void testH5Pget_shared_mesg_phase_change() {
+    public void testH5Pget_shared_mesg_phase_change()
+    {
         int ret_val = -1;
-        int[] size = new int[2];
+        int[] size  = new int[2];
 
         try {
             ret_val = H5.H5Pget_shared_mesg_phase_change(fcpl_id, size);
@@ -617,11 +720,12 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pget_shared_mesg_phase_change_EqualsSET() {
+    public void testH5Pget_shared_mesg_phase_change_EqualsSET()
+    {
         int[] size = new int[2];
 
         try {
-            H5.H5Pset_shared_mesg_phase_change(fcpl_id,50, 40);
+            H5.H5Pset_shared_mesg_phase_change(fcpl_id, 50, 40);
             H5.H5Pget_shared_mesg_phase_change(fcpl_id, size);
         }
         catch (Throwable err) {
@@ -633,11 +737,12 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_shared_mesg_phase_change() {
+    public void testH5Pset_shared_mesg_phase_change()
+    {
 
         int ret_val = -1;
         try {
-            ret_val = H5.H5Pset_shared_mesg_phase_change(fcpl_id,2, 1);
+            ret_val = H5.H5Pset_shared_mesg_phase_change(fcpl_id, 2, 1);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -647,22 +752,26 @@ public class TestH5P {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5PH5Pset_shared_mesg_phase_change_HighMaxlistValue() throws Throwable {
+    public void testH5PH5Pset_shared_mesg_phase_change_HighMaxlistValue() throws Throwable
+    {
         H5.H5Pset_shared_mesg_phase_change(fcpl_id, 5001, 4000);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5PH5Pset_shared_mesg_phase_change_HighMinbtreeValue() throws Throwable {
+    public void testH5PH5Pset_shared_mesg_phase_change_HighMinbtreeValue() throws Throwable
+    {
         H5.H5Pset_shared_mesg_phase_change(fcpl_id, 5000, 5001);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5PH5Pset_shared_mesg_phase_change_MinbtreeGreaterThanMaxlist() throws Throwable {
-        H5.H5Pset_link_phase_change(fcpl_id , 3, 7);
+    public void testH5PH5Pset_shared_mesg_phase_change_MinbtreeGreaterThanMaxlist() throws Throwable
+    {
+        H5.H5Pset_link_phase_change(fcpl_id, 3, 7);
     }
 
     @Test
-    public void testH5Pget_shared_mesg_nindexes() {
+    public void testH5Pget_shared_mesg_nindexes()
+    {
 
         int nindexes = -1;
         try {
@@ -676,12 +785,13 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_shared_mesg_nindexes() {
+    public void testH5Pset_shared_mesg_nindexes()
+    {
 
         int nindexes = -1;
-        int ret_val = -1;
+        int ret_val  = -1;
         try {
-            ret_val = H5.H5Pset_shared_mesg_nindexes(fcpl_id, 7);
+            ret_val  = H5.H5Pset_shared_mesg_nindexes(fcpl_id, 7);
             nindexes = H5.H5Pget_shared_mesg_nindexes(fcpl_id);
         }
         catch (Throwable err) {
@@ -689,21 +799,23 @@ public class TestH5P {
             fail("H5Pset_shared_mesg_nindexes: " + err);
         }
         assertTrue("H5Pset_shared_mesg_nindexes", ret_val >= 0);
-        assertEquals("Value of nindexes is equal to value set",7 ,nindexes);
+        assertEquals("Value of nindexes is equal to value set", 7, nindexes);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_shared_mesg_nindexes_InvalidHIGHnindexes()throws Throwable {
+    public void testH5Pset_shared_mesg_nindexes_InvalidHIGHnindexes() throws Throwable
+    {
         H5.H5Pset_shared_mesg_nindexes(fcpl_id, 9);
     }
 
     @Test
-    public void testH5Pset_shared_mesg_index() {
+    public void testH5Pset_shared_mesg_index()
+    {
 
         int ret_val = -1;
         try {
             H5.H5Pset_shared_mesg_nindexes(fcpl_id, 2);
-            ret_val = H5.H5Pset_shared_mesg_index(fcpl_id, 0,HDF5Constants.H5O_SHMESG_ATTR_FLAG, 10);
+            ret_val = H5.H5Pset_shared_mesg_index(fcpl_id, 0, HDF5Constants.H5O_SHMESG_ATTR_FLAG, 10);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -713,24 +825,27 @@ public class TestH5P {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_shared_mesg_index_Invalid_indexnum() throws Throwable {
-        H5.H5Pset_shared_mesg_index(fcpl_id, 2,HDF5Constants.H5O_SHMESG_ATTR_FLAG, 10);
+    public void testH5Pset_shared_mesg_index_Invalid_indexnum() throws Throwable
+    {
+        H5.H5Pset_shared_mesg_index(fcpl_id, 2, HDF5Constants.H5O_SHMESG_ATTR_FLAG, 10);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_shared_mesg_index_InvalidFlag() throws Throwable {
+    public void testH5Pset_shared_mesg_index_InvalidFlag() throws Throwable
+    {
         H5.H5Pset_shared_mesg_nindexes(fcpl_id, 7);
-        H5.H5Pset_shared_mesg_index(fcpl_id, 2,HDF5Constants.H5O_SHMESG_ALL_FLAG + 1, 10);
+        H5.H5Pset_shared_mesg_index(fcpl_id, 2, HDF5Constants.H5O_SHMESG_ALL_FLAG + 1, 10);
     }
 
     @Test
-    public void testH5Pget_shared_mesg_index() {
+    public void testH5Pget_shared_mesg_index()
+    {
 
-        int ret_val = -1;
+        int ret_val     = -1;
         int[] mesg_info = new int[2];
         try {
             H5.H5Pset_shared_mesg_nindexes(fcpl_id, 2);
-            H5.H5Pset_shared_mesg_index(fcpl_id, 0,HDF5Constants.H5O_SHMESG_ATTR_FLAG, 10);
+            H5.H5Pset_shared_mesg_index(fcpl_id, 0, HDF5Constants.H5O_SHMESG_ATTR_FLAG, 10);
             ret_val = H5.H5Pget_shared_mesg_index(fcpl_id, 0, mesg_info);
         }
         catch (Throwable err) {
@@ -743,13 +858,15 @@ public class TestH5P {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pget_shared_mesg_index_Invalid_indexnum() throws Throwable {
+    public void testH5Pget_shared_mesg_index_Invalid_indexnum() throws Throwable
+    {
         int[] mesg_info = new int[2];
         H5.H5Pget_shared_mesg_index(fcpl_id, 0, mesg_info);
     }
 
     @Test
-    public void testH5Pset_local_heap_size_hint() {
+    public void testH5Pset_local_heap_size_hint()
+    {
         int ret_val = -1;
         try {
             ret_val = H5.H5Pset_local_heap_size_hint(gcpl_id, 0);
@@ -762,7 +879,8 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pget_local_heap_size_hint() {
+    public void testH5Pget_local_heap_size_hint()
+    {
         long size_hint = -1;
         try {
             size_hint = H5.H5Pget_local_heap_size_hint(gcpl_id);
@@ -775,7 +893,8 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_nbit() {
+    public void testH5Pset_nbit()
+    {
         int ret_val = -1;
         try {
             ret_val = H5.H5Pset_nbit(ocpl_id);
@@ -788,9 +907,10 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_scaleoffset() {
-        int ret_val = -1;
-        int scale_type = HDF5Constants.H5Z_SO_FLOAT_DSCALE;
+    public void testH5Pset_scaleoffset()
+    {
+        int ret_val      = -1;
+        int scale_type   = HDF5Constants.H5Z_SO_FLOAT_DSCALE;
         int scale_factor = HDF5Constants.H5Z_SO_INT_MINBITS_DEFAULT;
         try {
             ret_val = H5.H5Pset_scaleoffset(ocpl_id, scale_type, scale_factor);
@@ -803,20 +923,23 @@ public class TestH5P {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_scaleoffset_Invalidscale_type() throws Throwable {
+    public void testH5Pset_scaleoffset_Invalidscale_type() throws Throwable
+    {
         H5.H5Pset_scaleoffset(ocpl_id, 3, 1);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_scaleoffset_Invalidscale_factor() throws Throwable {
+    public void testH5Pset_scaleoffset_Invalidscale_factor() throws Throwable
+    {
         H5.H5Pset_scaleoffset(ocpl_id, HDF5Constants.H5Z_SO_INT, -1);
     }
 
     @Test
-    public void testH5Pset_est_link_info() {
+    public void testH5Pset_est_link_info()
+    {
         int ret_val = -1;
         try {
-            ret_val = H5.H5Pset_est_link_info(gcpl_id, 0,10);
+            ret_val = H5.H5Pset_est_link_info(gcpl_id, 0, 10);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -826,13 +949,15 @@ public class TestH5P {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Pset_est_link_info_InvalidValues() throws Throwable {
-        H5.H5Pset_est_link_info(gcpl_id, 100000,10);
+    public void testH5Pset_est_link_info_InvalidValues() throws Throwable
+    {
+        H5.H5Pset_est_link_info(gcpl_id, 100000, 10);
     }
 
     @Test
-    public void testH5Pget_est_link_info() {
-        int ret_val = -1;
+    public void testH5Pget_est_link_info()
+    {
+        int ret_val     = -1;
         int[] link_info = new int[2];
         try {
             ret_val = H5.H5Pget_est_link_info(gcpl_id, link_info);
@@ -845,8 +970,9 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pset_elink_prefix() {
-        int ret_val = -1;
+    public void testH5Pset_elink_prefix()
+    {
+        int ret_val   = -1;
         String prefix = "tmp";
         try {
             ret_val = H5.H5Pset_elink_prefix(plapl_id, prefix);
@@ -859,14 +985,16 @@ public class TestH5P {
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pset_elink_prefix_null() throws Throwable{
+    public void testH5Pset_elink_prefix_null() throws Throwable
+    {
         H5.H5Pset_elink_prefix(plapl_id, null);
     }
 
     @Test
-    public void testH5Pget_elink_prefix() {
-        String prefix = "tmp";
-        String[] pre = {""};
+    public void testH5Pget_elink_prefix()
+    {
+        String prefix    = "tmp";
+        String[] pre     = {""};
         long prefix_size = 0;
 
         try {
@@ -877,22 +1005,25 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pget_elink_prefix: " + err);
         }
-        assertTrue(prefix_size>=0);
+        assertTrue(prefix_size >= 0);
         assertTrue("The prefix: ", prefix.equals(pre[0]));
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pget_elink_prefix_null() throws Throwable {
+    public void testH5Pget_elink_prefix_null() throws Throwable
+    {
         H5.H5Pget_elink_prefix(plapl_id, null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pget_userblock_null() throws Throwable {
+    public void testH5Pget_userblock_null() throws Throwable
+    {
         H5.H5Pget_userblock(fcpl_id, null);
     }
 
     @Test
-    public void testH5P_userblock() {
+    public void testH5P_userblock()
+    {
         long[] size = {0};
 
         try {
@@ -903,13 +1034,13 @@ public class TestH5P {
             H5.H5Pclose(fcpl_id);
 
             /* Get the file's dataset creation property list */
-            fcpl_id =  H5.H5Fget_create_plist(H5fid);
+            fcpl_id = H5.H5Fget_create_plist(H5fid);
 
             /* Get the file's version information */
             H5F_info2_t finfo = H5.H5Fget_info(H5fid);
-            assertTrue("super block version: "+finfo.super_version, finfo.super_version == 0);
-            assertTrue("free-space manager version: "+finfo.free_version, finfo.free_version == 0);
-            assertTrue("shared object header version: "+finfo.sohm_version, finfo.sohm_version == 0);
+            assertTrue("super block version: " + finfo.super_version, finfo.super_version == 0);
+            assertTrue("free-space manager version: " + finfo.free_version, finfo.free_version == 0);
+            assertTrue("shared object header version: " + finfo.sohm_version, finfo.sohm_version == 0);
             H5.H5Pget_userblock(fcpl_id, size);
             deleteH5file();
         }
@@ -917,17 +1048,19 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pget_userblock: " + err);
         }
-        assertTrue("user block size: "+size[0], size[0] == 1024);
+        assertTrue("user block size: " + size[0], size[0] == 1024);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pget_sizes_null() throws Throwable {
+    public void testH5Pget_sizes_null() throws Throwable
+    {
         H5.H5Pget_sizes(fcpl_id, null);
     }
 
     @Test
-    public void testH5P_sizes() {
-        long[] size = {0,0};
+    public void testH5P_sizes()
+    {
+        long[] size = {0, 0};
 
         try {
             H5.H5Pset_sizes(fcpl_id, 4, 8);
@@ -937,13 +1070,13 @@ public class TestH5P {
             H5.H5Pclose(fcpl_id);
 
             /* Get the file's dataset creation property list */
-            fcpl_id =  H5.H5Fget_create_plist(H5fid);
+            fcpl_id = H5.H5Fget_create_plist(H5fid);
 
             /* Get the file's version information */
             H5F_info2_t finfo = H5.H5Fget_info(H5fid);
-            assertTrue("super block version: "+finfo.super_version, finfo.super_version == 0);
-            assertTrue("free-space manager version: "+finfo.free_version, finfo.free_version == 0);
-            assertTrue("shared object header version: "+finfo.sohm_version, finfo.sohm_version == 0);
+            assertTrue("super block version: " + finfo.super_version, finfo.super_version == 0);
+            assertTrue("free-space manager version: " + finfo.free_version, finfo.free_version == 0);
+            assertTrue("shared object header version: " + finfo.sohm_version, finfo.sohm_version == 0);
             H5.H5Pget_sizes(fcpl_id, size);
             deleteH5file();
         }
@@ -951,18 +1084,20 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pget_sizes: " + err);
         }
-        assertTrue("sizeof_addr size: "+size[0], size[0] == 4);
-        assertTrue("sizeof_size size: "+size[1], size[1] == 8);
+        assertTrue("sizeof_addr size: " + size[0], size[0] == 4);
+        assertTrue("sizeof_size size: " + size[1], size[1] == 8);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pget_sym_k_null() throws Throwable {
+    public void testH5Pget_sym_k_null() throws Throwable
+    {
         H5.H5Pget_sym_k(fcpl_id, null);
     }
 
     @Test
-    public void testH5P_sym_k() {
-        int[] size = {0,0};
+    public void testH5P_sym_k()
+    {
+        int[] size = {0, 0};
 
         try {
             H5.H5Pset_sym_k(fcpl_id, 32, 8);
@@ -972,13 +1107,13 @@ public class TestH5P {
             H5.H5Pclose(fcpl_id);
 
             /* Get the file's dataset creation property list */
-            fcpl_id =  H5.H5Fget_create_plist(H5fid);
+            fcpl_id = H5.H5Fget_create_plist(H5fid);
 
             /* Get the file's version information */
             H5F_info2_t finfo = H5.H5Fget_info(H5fid);
-            assertTrue("super block version: "+finfo.super_version, finfo.super_version == 0);
-            assertTrue("free-space manager version: "+finfo.free_version, finfo.free_version == 0);
-            assertTrue("shared object header version: "+finfo.sohm_version, finfo.sohm_version == 0);
+            assertTrue("super block version: " + finfo.super_version, finfo.super_version == 0);
+            assertTrue("free-space manager version: " + finfo.free_version, finfo.free_version == 0);
+            assertTrue("shared object header version: " + finfo.sohm_version, finfo.sohm_version == 0);
             H5.H5Pget_sym_k(fcpl_id, size);
             deleteH5file();
         }
@@ -986,17 +1121,19 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pget_sym_k: " + err);
         }
-        assertTrue("symbol table tree rank: "+size[0], size[0] == 32);
-        assertTrue("symbol table node size: "+size[1], size[1] == 8);
+        assertTrue("symbol table tree rank: " + size[0], size[0] == 32);
+        assertTrue("symbol table node size: " + size[1], size[1] == 8);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pget_istore_k_null() throws Throwable {
+    public void testH5Pget_istore_k_null() throws Throwable
+    {
         H5.H5Pget_istore_k(fcpl_id, null);
     }
 
     @Test
-    public void testH5P_istore_k() {
+    public void testH5P_istore_k()
+    {
         int[] size = {0};
 
         try {
@@ -1007,13 +1144,13 @@ public class TestH5P {
             H5.H5Pclose(fcpl_id);
 
             /* Get the file's dataset creation property list */
-            fcpl_id =  H5.H5Fget_create_plist(H5fid);
+            fcpl_id = H5.H5Fget_create_plist(H5fid);
 
             /* Get the file's version information */
             H5F_info2_t finfo = H5.H5Fget_info(H5fid);
-            assertTrue("super block version: "+finfo.super_version, finfo.super_version == 1);
-            assertTrue("free-space manager version: "+finfo.free_version, finfo.free_version == 0);
-            assertTrue("shared object header version: "+finfo.sohm_version, finfo.sohm_version == 0);
+            assertTrue("super block version: " + finfo.super_version, finfo.super_version == 1);
+            assertTrue("free-space manager version: " + finfo.free_version, finfo.free_version == 0);
+            assertTrue("shared object header version: " + finfo.sohm_version, finfo.sohm_version == 0);
             H5.H5Pget_istore_k(fcpl_id, size);
             deleteH5file();
         }
@@ -1021,13 +1158,14 @@ public class TestH5P {
             err.printStackTrace();
             fail("H5Pget_sym_k: " + err);
         }
-        assertTrue("chunked storage b-tree 1/2-rank: "+size[0], size[0] == 64);
+        assertTrue("chunked storage b-tree 1/2-rank: " + size[0], size[0] == 64);
     }
 
     @Test
-    public void testH5P_obj_track_times() {
+    public void testH5P_obj_track_times()
+    {
         boolean default_ret_val = false;
-        boolean ret_val = true;
+        boolean ret_val         = true;
         try {
             default_ret_val = H5.H5Pget_obj_track_times(ocpl_id);
             H5.H5Pset_obj_track_times(ocpl_id, false);
@@ -1042,7 +1180,8 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5Pget_char_encoding() {
+    public void testH5Pget_char_encoding()
+    {
         int char_encoding = 0;
 
         try {
@@ -1065,18 +1204,19 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_fill_time() {
+    public void testH5P_fill_time()
+    {
         int[] fill_time = {0};
 
         try {
             H5.H5Pget_fill_time(ocpl_id, fill_time);
-            assertTrue("fill_time: "+fill_time[0], fill_time[0] == HDF5Constants.H5D_FILL_TIME_IFSET);
+            assertTrue("fill_time: " + fill_time[0], fill_time[0] == HDF5Constants.H5D_FILL_TIME_IFSET);
             H5.H5Pset_fill_time(ocpl_id, HDF5Constants.H5D_FILL_TIME_ALLOC);
             H5.H5Pget_fill_time(ocpl_id, fill_time);
-            assertTrue("fill_time: "+fill_time[0], fill_time[0] == HDF5Constants.H5D_FILL_TIME_ALLOC);
+            assertTrue("fill_time: " + fill_time[0], fill_time[0] == HDF5Constants.H5D_FILL_TIME_ALLOC);
             H5.H5Pset_fill_time(ocpl_id, HDF5Constants.H5D_FILL_TIME_NEVER);
             H5.H5Pget_fill_time(ocpl_id, fill_time);
-            assertTrue("fill_time: "+fill_time[0], fill_time[0] == HDF5Constants.H5D_FILL_TIME_NEVER);
+            assertTrue("fill_time: " + fill_time[0], fill_time[0] == HDF5Constants.H5D_FILL_TIME_NEVER);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1085,18 +1225,19 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_alloc_time() {
+    public void testH5P_alloc_time()
+    {
         int[] alloc_time = {0};
 
         try {
             H5.H5Pget_alloc_time(ocpl_id, alloc_time);
-            assertTrue("alloc_time: "+alloc_time[0], alloc_time[0] == HDF5Constants.H5D_ALLOC_TIME_LATE);
+            assertTrue("alloc_time: " + alloc_time[0], alloc_time[0] == HDF5Constants.H5D_ALLOC_TIME_LATE);
             H5.H5Pset_alloc_time(ocpl_id, HDF5Constants.H5D_ALLOC_TIME_EARLY);
             H5.H5Pget_alloc_time(ocpl_id, alloc_time);
-            assertTrue("alloc_time: "+alloc_time[0], alloc_time[0] == HDF5Constants.H5D_ALLOC_TIME_EARLY);
+            assertTrue("alloc_time: " + alloc_time[0], alloc_time[0] == HDF5Constants.H5D_ALLOC_TIME_EARLY);
             H5.H5Pset_alloc_time(ocpl_id, HDF5Constants.H5D_ALLOC_TIME_INCR);
             H5.H5Pget_alloc_time(ocpl_id, alloc_time);
-            assertTrue("alloc_time: "+alloc_time[0], alloc_time[0] == HDF5Constants.H5D_ALLOC_TIME_INCR);
+            assertTrue("alloc_time: " + alloc_time[0], alloc_time[0] == HDF5Constants.H5D_ALLOC_TIME_INCR);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1105,21 +1246,24 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_fill_value() {
-        int[] fill_value = {-1};
+    public void testH5P_fill_value()
+    {
+        int[] fill_value        = {-1};
         int[] fill_value_status = {-1};
 
         try {
             H5.H5Pfill_value_defined(ocpl_id, fill_value_status);
-            assertTrue("fill_value_status: "+fill_value_status[0], fill_value_status[0] == HDF5Constants.H5D_FILL_VALUE_DEFAULT);
+            assertTrue("fill_value_status: " + fill_value_status[0],
+                       fill_value_status[0] == HDF5Constants.H5D_FILL_VALUE_DEFAULT);
             H5.H5Pget_fill_value(ocpl_id, HDF5Constants.H5T_NATIVE_INT, fill_value);
-            assertTrue("fill_value: "+fill_value[0], fill_value[0] == 0);
+            assertTrue("fill_value: " + fill_value[0], fill_value[0] == 0);
             fill_value[0] = 255;
             H5.H5Pset_fill_value(ocpl_id, HDF5Constants.H5T_NATIVE_INT, fill_value);
             H5.H5Pget_fill_value(ocpl_id, HDF5Constants.H5T_NATIVE_INT, fill_value);
-            assertTrue("fill_value: "+fill_value[0], fill_value[0] == 255);
+            assertTrue("fill_value: " + fill_value[0], fill_value[0] == 255);
             H5.H5Pfill_value_defined(ocpl_id, fill_value_status);
-            assertTrue("fill_value_status: "+fill_value_status[0], fill_value_status[0] == HDF5Constants.H5D_FILL_VALUE_USER_DEFINED);
+            assertTrue("fill_value_status: " + fill_value_status[0],
+                       fill_value_status[0] == HDF5Constants.H5D_FILL_VALUE_USER_DEFINED);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1128,15 +1272,16 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_layout() {
+    public void testH5P_layout()
+    {
         int layout_type = -1;
 
         try {
             layout_type = H5.H5Pget_layout(ocpl_id);
-            assertTrue("layout: "+layout_type, layout_type == HDF5Constants.H5D_CONTIGUOUS);
+            assertTrue("layout: " + layout_type, layout_type == HDF5Constants.H5D_CONTIGUOUS);
             H5.H5Pset_layout(ocpl_id, HDF5Constants.H5D_COMPACT);
             layout_type = H5.H5Pget_layout(ocpl_id);
-            assertTrue("layout: "+layout_type, layout_type == HDF5Constants.H5D_COMPACT);
+            assertTrue("layout: " + layout_type, layout_type == HDF5Constants.H5D_COMPACT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1145,18 +1290,19 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_chunk() {
-        long[] chunk_size = {0,0};
-        long[] chunk_new_size = {2,3};
-        int layout_type = -1;
+    public void testH5P_chunk()
+    {
+        long[] chunk_size     = {0, 0};
+        long[] chunk_new_size = {2, 3};
+        int layout_type       = -1;
 
         try {
             H5.H5Pset_chunk(ocpl_id, 2, chunk_new_size);
             H5.H5Pget_chunk(ocpl_id, 2, chunk_size);
-            assertTrue("chunk: "+chunk_size[0], chunk_size[0] == chunk_new_size[0]);
-            assertTrue("chunk: "+chunk_size[1], chunk_size[1] == chunk_new_size[1]);
+            assertTrue("chunk: " + chunk_size[0], chunk_size[0] == chunk_new_size[0]);
+            assertTrue("chunk: " + chunk_size[1], chunk_size[1] == chunk_new_size[1]);
             layout_type = H5.H5Pget_layout(ocpl_id);
-            assertTrue("layout: "+layout_type, layout_type == HDF5Constants.H5D_CHUNKED);
+            assertTrue("layout: " + layout_type, layout_type == HDF5Constants.H5D_CHUNKED);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1165,20 +1311,22 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_file_space_strategy() {
-        long[] threshold = {0};
+    public void testH5P_file_space_strategy()
+    {
+        long[] threshold  = {0};
         boolean[] persist = {false};
-        int strategy = 0;
+        int strategy      = 0;
         try {
             strategy = H5.H5Pget_file_space_strategy(fcpl_id, persist, threshold);
-            assertTrue("strategy(default): "+strategy, strategy == HDF5Constants.H5F_FSPACE_STRATEGY_FSM_AGGR);
-            assertTrue("persist(default): "+persist[0], persist[0] == false);
-            assertTrue("threshold(default): "+threshold[0], threshold[0] == 1);
+            assertTrue("strategy(default): " + strategy,
+                       strategy == HDF5Constants.H5F_FSPACE_STRATEGY_FSM_AGGR);
+            assertTrue("persist(default): " + persist[0], persist[0] == false);
+            assertTrue("threshold(default): " + threshold[0], threshold[0] == 1);
             H5.H5Pset_file_space_strategy(fcpl_id, HDF5Constants.H5F_FSPACE_STRATEGY_PAGE, true, 1);
             strategy = H5.H5Pget_file_space_strategy(fcpl_id, persist, threshold);
-            assertTrue("strategy: "+strategy, strategy == HDF5Constants.H5F_FSPACE_STRATEGY_PAGE);
-            assertTrue("persist: "+persist[0], persist[0] == true);
-            assertTrue("threshold: "+threshold[0], threshold[0] == 1);
+            assertTrue("strategy: " + strategy, strategy == HDF5Constants.H5F_FSPACE_STRATEGY_PAGE);
+            assertTrue("persist: " + persist[0], persist[0] == true);
+            assertTrue("threshold: " + threshold[0], threshold[0] == 1);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1187,23 +1335,25 @@ public class TestH5P {
     }
 
     @Test
-    public void testH5P_file_space_page_size() {
+    public void testH5P_file_space_page_size()
+    {
         long page_size = 0;
         try {
             page_size = H5.H5Pget_file_space_page_size(fcpl_id);
-            assertTrue("page_size(default): "+page_size, page_size == 4096);
+            assertTrue("page_size(default): " + page_size, page_size == 4096);
             H5.H5Pset_file_space_page_size(fcpl_id, 512);
             page_size = H5.H5Pget_file_space_page_size(fcpl_id);
-            assertTrue("page_size: "+page_size, page_size == 512);
+            assertTrue("page_size: " + page_size, page_size == 512);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("testH5P_file_space_page_size: " + err);
         }
-   }
+    }
 
     @Test
-    public void testH5Pset_efile_prefix() {
+    public void testH5Pset_efile_prefix()
+    {
         String prefix = "tmp";
         try {
             H5.H5Pset_efile_prefix(lapl_id, prefix);
@@ -1215,14 +1365,16 @@ public class TestH5P {
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pset_efile_prefix_null() throws Throwable{
+    public void testH5Pset_efile_prefix_null() throws Throwable
+    {
         H5.H5Pset_efile_prefix(lapl_id, null);
     }
 
     @Test
-    public void testH5Pget_efile_prefix() {
+    public void testH5Pget_efile_prefix()
+    {
         String prefix = "tmp";
-        String pre = "";
+        String pre    = "";
 
         try {
             H5.H5Pset_efile_prefix(lapl_id, prefix);
@@ -1236,15 +1388,17 @@ public class TestH5P {
     }
 
     @Ignore
-    public void testH5P_chunk_opts() {
+    public void testH5P_chunk_opts()
+    {
         int chunk_opts = -1;
 
         try {
             chunk_opts = H5.H5Pget_chunk_opts(ocpl_id);
-            assertTrue("chunk_opts: "+chunk_opts, chunk_opts == 0);
+            assertTrue("chunk_opts: " + chunk_opts, chunk_opts == 0);
             H5.H5Pset_chunk_opts(ocpl_id, HDF5Constants.H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS);
             chunk_opts = H5.H5Pget_chunk_opts(ocpl_id);
-            assertTrue("chunk_opts: "+chunk_opts, chunk_opts == HDF5Constants.H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS);
+            assertTrue("chunk_opts: " + chunk_opts,
+                       chunk_opts == HDF5Constants.H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS);
         }
         catch (Throwable err) {
             err.printStackTrace();
diff --git a/java/test/TestH5PData.java b/java/test/TestH5PData.java
index 8b04629..49a0b7d 100644
--- a/java/test/TestH5PData.java
+++ b/java/test/TestH5PData.java
@@ -31,44 +31,61 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5PData {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     private static final String H5_FILE = "testPD.h5";
-    private static final int DIM_X = 12;
-    private static final int DIM_Y = 18;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long plist_id = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-    double windchillF[][] =
-    {{36.0, 31.0, 25.0, 19.0, 13.0, 7.0, 1.0, -5.0, -11.0, -16.0, -22.0, -28.0, -34.0, -40.0, -46.0, -52.0, -57.0, -63.0},
-     {34.0, 27.0, 21.0, 15.0, 9.0, 3.0, -4.0, -10.0, -16.0, -22.0, -28.0, -35.0, -41.0, -47.0, -53.0, -59.0, -66.0, -72.0},
-     {32.0, 25.0, 19.0, 13.0, 6.0, 0.0, -7.0, -13.0, -19.0, -26.0, -32.0, -39.0, -45.0, -51.0, -58.0, -64.0, -71.0, -77.0},
-     {30.0, 24.0, 17.0, 11.0, 4.0, -2.0, -9.0, -15.0, -22.0, -29.0, -35.0, -42.0, -48.0, -55.0, -61.0, -68.0, -74.0, -81.0},
-     {29.0, 23.0, 16.0, 9.0, 3.0, -4.0, -11.0, -17.0, -24.0, -31.0, -37.0, -44.0, -51.0, -58.0, -64.0, -71.0, -78.0, -84.0},
-     {28.0, 22.0, 15.0, 8.0, 1.0, -5.0, -12.0, -19.0, -26.0, -33.0, -39.0, -46.0, -53.0, -60.0, -67.0, -73.0, -80.0, -87.0},
-     {28.0, 21.0, 14.0, 7.0, 0.0, -7.0, -14.0, -21.0, -27.0, -34.0, -41.0, -48.0, -55.0, -62.0, -69.0, -76.0, -82.0, -89.0},
-     {27.0, 20.0, 13.0, 6.0, -1.0, -8.0, -15.0, -22.0, -29.0, -36.0, -43.0, -50.0, -57.0, -64.0, -71.0, -78.0, -84.0, -91.0},
-     {26.0, 19.0, 12.0, 5.0, -2.0, -9.0, -16.0, -23.0, -30.0, -37.0, -44.0, -51.0, -58.0, -65.0, -72.0, -79.0, -86.0, -93.0},
-     {26.0, 19.0, 12.0, 4.0, -3.0, -10.0, -17.0, -24.0, -31.0, -38.0, -45.0, -52.0, -60.0, -67.0, -74.0, -81.0, -88.0, -95.0},
-     {25.0, 18.0, 11.0, 4.0, -3.0, -11.0, -18.0, -25.0, -32.0, -39.0, -46.0, -54.0, -61.0, -68.0, -75.0, -82.0, -89.0, -97.0},
-     {25.0, 17.0, 10.0, 3.0, -4.0, -11.0, -19.0, -26.0, -33.0, -40.0, -48.0, -55.0, -62.0, -69.0, -76.0, -84.0, -91.0, -98.0}
-    };
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X      = 12;
+    private static final int DIM_Y      = 18;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5did                          = HDF5Constants.H5I_INVALID_HID;
+    long plist_id                       = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                       = {DIM_X, DIM_Y};
+    double windchillF[][] = {{36.0, 31.0, 25.0, 19.0, 13.0, 7.0, 1.0, -5.0, -11.0, -16.0, -22.0, -28.0, -34.0,
+                              -40.0, -46.0, -52.0, -57.0, -63.0},
+                             {34.0, 27.0, 21.0, 15.0, 9.0, 3.0, -4.0, -10.0, -16.0, -22.0, -28.0, -35.0,
+                              -41.0, -47.0, -53.0, -59.0, -66.0, -72.0},
+                             {32.0, 25.0, 19.0, 13.0, 6.0, 0.0, -7.0, -13.0, -19.0, -26.0, -32.0, -39.0,
+                              -45.0, -51.0, -58.0, -64.0, -71.0, -77.0},
+                             {30.0, 24.0, 17.0, 11.0, 4.0, -2.0, -9.0, -15.0, -22.0, -29.0, -35.0, -42.0,
+                              -48.0, -55.0, -61.0, -68.0, -74.0, -81.0},
+                             {29.0, 23.0, 16.0, 9.0, 3.0, -4.0, -11.0, -17.0, -24.0, -31.0, -37.0, -44.0,
+                              -51.0, -58.0, -64.0, -71.0, -78.0, -84.0},
+                             {28.0, 22.0, 15.0, 8.0, 1.0, -5.0, -12.0, -19.0, -26.0, -33.0, -39.0, -46.0,
+                              -53.0, -60.0, -67.0, -73.0, -80.0, -87.0},
+                             {28.0, 21.0, 14.0, 7.0, 0.0, -7.0, -14.0, -21.0, -27.0, -34.0, -41.0, -48.0,
+                              -55.0, -62.0, -69.0, -76.0, -82.0, -89.0},
+                             {27.0, 20.0, 13.0, 6.0, -1.0, -8.0, -15.0, -22.0, -29.0, -36.0, -43.0, -50.0,
+                              -57.0, -64.0, -71.0, -78.0, -84.0, -91.0},
+                             {26.0, 19.0, 12.0, 5.0, -2.0, -9.0, -16.0, -23.0, -30.0, -37.0, -44.0, -51.0,
+                              -58.0, -65.0, -72.0, -79.0, -86.0, -93.0},
+                             {26.0, 19.0, 12.0, 4.0, -3.0, -10.0, -17.0, -24.0, -31.0, -38.0, -45.0, -52.0,
+                              -60.0, -67.0, -74.0, -81.0, -88.0, -95.0},
+                             {25.0, 18.0, 11.0, 4.0, -3.0, -11.0, -18.0, -25.0, -32.0, -39.0, -46.0, -54.0,
+                              -61.0, -68.0, -75.0, -82.0, -89.0, -97.0},
+                             {25.0, 17.0, 10.0, 3.0, -4.0, -11.0, -19.0, -26.0, -33.0, -40.0, -48.0, -55.0,
+                              -62.0, -69.0, -76.0, -84.0, -91.0, -98.0}};
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final long _createFloatDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createFloatDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_NATIVE_FLOAT, dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_NATIVE_FLOAT, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -80,49 +97,67 @@ public class TestH5PData {
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            H5dsid = H5.H5Screate_simple(2, H5dims, null);
-            H5did = _createFloatDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+            H5fid    = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
+            H5dsid   = H5.H5Screate_simple(2, H5dims, null);
+            H5did    = _createFloatDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
             plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5PData.createH5file: " + err);
         }
-        assertTrue("TestH5PData.createH5file: H5.H5Fcreate: ",H5fid > 0);
-        assertTrue("TestH5PData.createH5file: H5.H5Screate_simple: ",H5dsid > 0);
-        assertTrue("TestH5PData.createH5file: _createFloatDataset: ",H5did > 0);
+        assertTrue("TestH5PData.createH5file: H5.H5Fcreate: ", H5fid > 0);
+        assertTrue("TestH5PData.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
+        assertTrue("TestH5PData.createH5file: _createFloatDataset: ", H5did > 0);
         assertTrue(plist_id > 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did > 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
 
         if (plist_id > 0)
-            try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plist_id);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
     @Test
-    public void testH5Pdata_transform() {
-        String f_to_c = "(5/9.0)*(x-32)";
+    public void testH5Pdata_transform()
+    {
+        String f_to_c             = "(5/9.0)*(x-32)";
         double windchillFread[][] = new double[DIM_X][DIM_Y];
         double windchillC;
         NumberFormat formatter = new DecimalFormat("#0.000");
@@ -130,38 +165,40 @@ public class TestH5PData {
         try {
             H5.H5Pset_data_transform(plist_id, f_to_c);
             H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    plist_id, windchillF);
+                        plist_id, windchillF);
             H5.H5Dread(H5did, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    HDF5Constants.H5P_DEFAULT, windchillFread);
+                       HDF5Constants.H5P_DEFAULT, windchillFread);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pdata_transform: " + err);
         }
-        for(int row = 0; row < DIM_X; row++)
-            for(int col = 0; col < DIM_Y; col++) {
-                windchillC = (5/9.0)*(windchillF[row][col]-32);
-                String Cstr = formatter.format(windchillC);
+        for (int row = 0; row < DIM_X; row++)
+            for (int col = 0; col < DIM_Y; col++) {
+                windchillC   = (5 / 9.0) * (windchillF[row][col] - 32);
+                String Cstr  = formatter.format(windchillC);
                 String Fread = formatter.format(windchillFread[row][col]);
-                assertTrue("H5Pdata_transform: <"+row+","+col+">"+Fread+"="+Cstr, Fread.compareTo(Cstr)==0);
+                assertTrue("H5Pdata_transform: <" + row + "," + col + ">" + Fread + "=" + Cstr,
+                           Fread.compareTo(Cstr) == 0);
             }
     }
 
     @Test
-    public void testH5P_buffer() {
+    public void testH5P_buffer()
+    {
         long default_size = 0;
-        long size = 0;
+        long size         = 0;
 
         try {
             default_size = H5.H5Pget_buffer_size(plist_id);
-            H5.H5Pset_buffer_size(plist_id, DIM_X*DIM_Y);
+            H5.H5Pset_buffer_size(plist_id, DIM_X * DIM_Y);
             size = H5.H5Pget_buffer_size(plist_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5P_buffer fail: " + err);
         }
-        assertTrue("H5P_buffer default: "+default_size, default_size==1024*1024);
-        assertTrue("H5P_buffer size: "+size, size==DIM_X*DIM_Y);
+        assertTrue("H5P_buffer default: " + default_size, default_size == 1024 * 1024);
+        assertTrue("H5P_buffer size: " + size, size == DIM_X * DIM_Y);
     }
 }
diff --git a/java/test/TestH5PL.java b/java/test/TestH5PL.java
index d44cc0b..f6440cd 100644
--- a/java/test/TestH5PL.java
+++ b/java/test/TestH5PL.java
@@ -14,6 +14,7 @@ package test;
 
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
@@ -26,39 +27,45 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5PL {
-    @Rule public TestName testname = new TestName();
-    private static String FILENAME = "h5_dlopenChunk.h5";
-    private static String DATASETNAME = "DS1";
-    private static final int DIM_X = 6;
-    private static final int DIM_Y = 8;
-    private static final int CHUNK_X = 4;
-    private static final int CHUNK_Y = 4;
-    private static final int RANK = 2;
-    private static final int NDIMS = 2;
+    @Rule
+    public TestName testname                    = new TestName();
+    private static String FILENAME              = "h5_dlopenChunk.h5";
+    private static String DATASETNAME           = "DS1";
+    private static final int DIM_X              = 6;
+    private static final int DIM_Y              = 8;
+    private static final int CHUNK_X            = 4;
+    private static final int CHUNK_Y            = 4;
+    private static final int RANK               = 2;
+    private static final int NDIMS              = 2;
     private static final int H5Z_FILTER_DYNLIB4 = 260;
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test
-    public void TestH5PLplugins() {
+    public void TestH5PLplugins()
+    {
         try {
             int plugin_flags = H5.H5PLget_loading_state();
-            assertTrue("H5.H5PLget_loading_state: "+plugin_flags, plugin_flags == HDF5Constants.H5PL_ALL_PLUGIN);
+            assertTrue("H5.H5PLget_loading_state: " + plugin_flags,
+                       plugin_flags == HDF5Constants.H5PL_ALL_PLUGIN);
             int new_setting = plugin_flags & ~HDF5Constants.H5PL_FILTER_PLUGIN;
-            H5.H5PLset_loading_state (new_setting);
+            H5.H5PLset_loading_state(new_setting);
             int changed_flags = H5.H5PLget_loading_state();
-            assertTrue("H5.H5PLget_loading_state: "+changed_flags, changed_flags == new_setting);
-            H5.H5PLset_loading_state (plugin_flags);
+            assertTrue("H5.H5PLget_loading_state: " + changed_flags, changed_flags == new_setting);
+            H5.H5PLset_loading_state(plugin_flags);
             changed_flags = H5.H5PLget_loading_state();
-            assertTrue("H5.H5PLget_loading_state: "+changed_flags, changed_flags == HDF5Constants.H5PL_ALL_PLUGIN);
+            assertTrue("H5.H5PLget_loading_state: " + changed_flags,
+                       changed_flags == HDF5Constants.H5PL_ALL_PLUGIN);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -67,15 +74,16 @@ public class TestH5PL {
     }
 
     @Test
-    public void TestH5PLpaths() {
+    public void TestH5PLpaths()
+    {
         try {
             // Get the original number of paths
             int nStartPaths = H5.H5PLsize();
 
-            int nPaths;                     /* # paths from H5PLSize()      */
-            int nTruePaths = nStartPaths;   /* What the # paths should be   */
-            int index;                      /* Path table index             */
-            String path;                    /* Path from H5PLget()          */
+            int nPaths;                   /* # paths from H5PLSize()      */
+            int nTruePaths = nStartPaths; /* What the # paths should be   */
+            int index;                    /* Path table index             */
+            String path;                  /* Path from H5PLget()          */
 
             // APPEND a path and ensure it was added correctly
             String pathAppend = "path_append";
@@ -86,8 +94,9 @@ public class TestH5PL {
             assertTrue("# paths should be " + nTruePaths + " but was " + nPaths, nTruePaths == nPaths);
 
             index = nTruePaths - 1;
-            path = H5.H5PLget(index);
-            assertTrue("Path should be " + pathAppend + " but was " + path, path.compareToIgnoreCase(pathAppend) == 0);
+            path  = H5.H5PLget(index);
+            assertTrue("Path should be " + pathAppend + " but was " + path,
+                       path.compareToIgnoreCase(pathAppend) == 0);
 
             // PREPEND a path and ensure it was added correctly
             String pathPrepend = "path_prepend";
@@ -98,13 +107,14 @@ public class TestH5PL {
             assertTrue("# paths should be " + nTruePaths + " but was " + nPaths, nTruePaths == nPaths);
 
             index = 0;
-            path = H5.H5PLget(index);
-            assertTrue("Path should be " + pathPrepend + " but was " + path, path.compareToIgnoreCase(pathPrepend) == 0);
+            path  = H5.H5PLget(index);
+            assertTrue("Path should be " + pathPrepend + " but was " + path,
+                       path.compareToIgnoreCase(pathPrepend) == 0);
 
             // INSERT a path and ensure it was added correctly
             // Inserting at the index == # of start paths ensures we're in the middle
             String pathInsert = "path_insert";
-            index = nStartPaths;
+            index             = nStartPaths;
             H5.H5PLinsert(pathInsert, index);
 
             nPaths = H5.H5PLsize();
@@ -112,22 +122,24 @@ public class TestH5PL {
             assertTrue("# paths should be " + nTruePaths + " but was " + nPaths, nTruePaths == nPaths);
 
             path = H5.H5PLget(index);
-            assertTrue("Path should be " + pathInsert + " but was " + path, path.compareToIgnoreCase(pathInsert) == 0);
+            assertTrue("Path should be " + pathInsert + " but was " + path,
+                       path.compareToIgnoreCase(pathInsert) == 0);
 
             // REPLACE the path we just added and ensure it updated correctly
             String pathReplace = "path_replace";
-            index = nStartPaths;
+            index              = nStartPaths;
             H5.H5PLreplace(pathReplace, index);
 
             nPaths = H5.H5PLsize();
             assertTrue("# paths should be " + nTruePaths + " but was " + nPaths, nTruePaths == nPaths);
 
             path = H5.H5PLget(index);
-            assertTrue("Path should be " + pathReplace + " but was " + path, path.compareToIgnoreCase(pathReplace) == 0);
+            assertTrue("Path should be " + pathReplace + " but was " + path,
+                       path.compareToIgnoreCase(pathReplace) == 0);
 
             // REMOVE the path we just replaced and check that the table was compacted
             // The (index+1) path should move down to fill the space when the path is removed.
-            index = nStartPaths;
+            index             = nStartPaths;
             String pathRemove = H5.H5PLget(index + 1);
             H5.H5PLremove(index);
 
@@ -136,7 +148,8 @@ public class TestH5PL {
             assertTrue("# paths should be " + nTruePaths + " but was " + nPaths, nTruePaths == nPaths);
 
             path = H5.H5PLget(index);
-            assertTrue("Path should be " + pathRemove + " but was " + path, path.compareToIgnoreCase(pathRemove) == 0);
+            assertTrue("Path should be " + pathRemove + " but was " + path,
+                       path.compareToIgnoreCase(pathRemove) == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -145,22 +158,23 @@ public class TestH5PL {
     }
 
     @Ignore
-    public void TestH5PLdlopen() {
-        long file_id = HDF5Constants.H5I_INVALID_HID;
+    public void TestH5PLdlopen()
+    {
+        long file_id      = HDF5Constants.H5I_INVALID_HID;
         long filespace_id = HDF5Constants.H5I_INVALID_HID;
-        long dataset_id = HDF5Constants.H5I_INVALID_HID;
-        long fapl_id = HDF5Constants.H5I_INVALID_HID;
-        long dcpl_id = HDF5Constants.H5I_INVALID_HID;
+        long dataset_id   = HDF5Constants.H5I_INVALID_HID;
+        long fapl_id      = HDF5Constants.H5I_INVALID_HID;
+        long dcpl_id      = HDF5Constants.H5I_INVALID_HID;
         try {
-            int[]  cd_values = {9, 0, 0, 0};
-            int[] libversion = {0, 0, 0};
-            long[] dims = { DIM_X, DIM_Y };
-            long[] chunk_dims = { CHUNK_X, CHUNK_Y };
-            int[][] dset_data = new int[DIM_X][DIM_Y];
-            int[] mdc_nelmts = {0};
+            int[] cd_values    = {9, 0, 0, 0};
+            int[] libversion   = {0, 0, 0};
+            long[] dims        = {DIM_X, DIM_Y};
+            long[] chunk_dims  = {CHUNK_X, CHUNK_Y};
+            int[][] dset_data  = new int[DIM_X][DIM_Y];
+            int[] mdc_nelmts   = {0};
             long[] rdcc_nelmts = {0};
             long[] rdcc_nbytes = {0};
-            double[] rdcc_w0 = {0};
+            double[] rdcc_w0   = {0};
 
             // Initialize data to "1", to make it easier to see the selections.
             for (int indx = 0; indx < DIM_X; indx++)
@@ -170,7 +184,7 @@ public class TestH5PL {
             // Create a new file using default properties.
             try {
                 file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
-                        HDF5Constants.H5P_DEFAULT);
+                                       HDF5Constants.H5P_DEFAULT);
             }
             catch (Exception e) {
                 e.printStackTrace();
@@ -212,7 +226,8 @@ public class TestH5PL {
                 cd_values[2] = libversion[1];
                 cd_values[3] = libversion[2];
                 if (dcpl_id >= 0)
-                    H5.H5Pset_filter(dcpl_id, H5Z_FILTER_DYNLIB4, HDF5Constants.H5Z_FLAG_MANDATORY, 4, cd_values);
+                    H5.H5Pset_filter(dcpl_id, H5Z_FILTER_DYNLIB4, HDF5Constants.H5Z_FLAG_MANDATORY, 4,
+                                     cd_values);
             }
             catch (Exception e) {
                 e.printStackTrace();
@@ -222,8 +237,9 @@ public class TestH5PL {
             // Create the chunked dataset.
             try {
                 if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0))
-                    dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_NATIVE_INT, filespace_id,
-                            HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT);
+                    dataset_id =
+                        H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_NATIVE_INT, filespace_id,
+                                     HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT);
             }
             catch (Exception e) {
                 e.printStackTrace();
@@ -232,8 +248,8 @@ public class TestH5PL {
 
             try {
                 if (dataset_id >= 0)
-                    H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                            HDF5Constants.H5S_ALL, dset_data);
+                    H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
+                                HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, dset_data);
             }
             catch (Exception e) {
                 e.printStackTrace();
@@ -247,13 +263,29 @@ public class TestH5PL {
         finally {
             // End access to the dataset and release resources used by it.
             if (dcpl_id >= 0)
-                try {H5.H5Pclose_class(dcpl_id);} catch (Throwable err) {}
+                try {
+                    H5.H5Pclose_class(dcpl_id);
+                }
+                catch (Throwable err) {
+                }
             if (dataset_id >= 0)
-                try {H5.H5Dclose(dataset_id);} catch (Throwable err) {}
+                try {
+                    H5.H5Dclose(dataset_id);
+                }
+                catch (Throwable err) {
+                }
             if (filespace_id >= 0)
-                try {H5.H5Sclose(filespace_id);} catch (Throwable err) {}
+                try {
+                    H5.H5Sclose(filespace_id);
+                }
+                catch (Throwable err) {
+                }
             if (file_id >= 0)
-                try {H5.H5Fclose(file_id);} catch (Throwable err) {}
+                try {
+                    H5.H5Fclose(file_id);
+                }
+                catch (Throwable err) {
+                }
         }
     }
 }
diff --git a/java/test/TestH5Pfapl.java b/java/test/TestH5Pfapl.java
index f6be24f..307ee74 100644
--- a/java/test/TestH5Pfapl.java
+++ b/java/test/TestH5Pfapl.java
@@ -35,104 +35,140 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Pfapl {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
-    private static final String H5_FILE = "testPf.h5";
-    private static final String H5_LOG_FILE = "testPf.log";
+    private static final String H5_FILE        = "testPf.h5";
+    private static final String H5_LOG_FILE    = "testPf.log";
     private static final String H5_FAMILY_FILE = "testPf%05d";
-    private static final String H5_MULTI_FILE = "testPfmulti";
-    private static char  MULTI_LETTERS[] = {'X','s','b','r','g','l','o'};
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    private static final int DIMF_X = 12;
-    private static final int DIMF_Y = 18;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long H5Fdsid = HDF5Constants.H5I_INVALID_HID;
-    long H5Fdid = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-    long fapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plapl_id = HDF5Constants.H5I_INVALID_HID;
-    long dapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plist_id = HDF5Constants.H5I_INVALID_HID;
-    long btplist_id = HDF5Constants.H5I_INVALID_HID;
-    long[] H5Fdims = { DIMF_X, DIMF_Y };
-    double windchillF[][] =
-    {{36.0, 31.0, 25.0, 19.0, 13.0, 7.0, 1.0, -5.0, -11.0, -16.0, -22.0, -28.0, -34.0, -40.0, -46.0, -52.0, -57.0, -63.0},
-     {34.0, 27.0, 21.0, 15.0, 9.0, 3.0, -4.0, -10.0, -16.0, -22.0, -28.0, -35.0, -41.0, -47.0, -53.0, -59.0, -66.0, -72.0},
-     {32.0, 25.0, 19.0, 13.0, 6.0, 0.0, -7.0, -13.0, -19.0, -26.0, -32.0, -39.0, -45.0, -51.0, -58.0, -64.0, -71.0, -77.0},
-     {30.0, 24.0, 17.0, 11.0, 4.0, -2.0, -9.0, -15.0, -22.0, -29.0, -35.0, -42.0, -48.0, -55.0, -61.0, -68.0, -74.0, -81.0},
-     {29.0, 23.0, 16.0, 9.0, 3.0, -4.0, -11.0, -17.0, -24.0, -31.0, -37.0, -44.0, -51.0, -58.0, -64.0, -71.0, -78.0, -84.0},
-     {28.0, 22.0, 15.0, 8.0, 1.0, -5.0, -12.0, -19.0, -26.0, -33.0, -39.0, -46.0, -53.0, -60.0, -67.0, -73.0, -80.0, -87.0},
-     {28.0, 21.0, 14.0, 7.0, 0.0, -7.0, -14.0, -21.0, -27.0, -34.0, -41.0, -48.0, -55.0, -62.0, -69.0, -76.0, -82.0, -89.0},
-     {27.0, 20.0, 13.0, 6.0, -1.0, -8.0, -15.0, -22.0, -29.0, -36.0, -43.0, -50.0, -57.0, -64.0, -71.0, -78.0, -84.0, -91.0},
-     {26.0, 19.0, 12.0, 5.0, -2.0, -9.0, -16.0, -23.0, -30.0, -37.0, -44.0, -51.0, -58.0, -65.0, -72.0, -79.0, -86.0, -93.0},
-     {26.0, 19.0, 12.0, 4.0, -3.0, -10.0, -17.0, -24.0, -31.0, -38.0, -45.0, -52.0, -60.0, -67.0, -74.0, -81.0, -88.0, -95.0},
-     {25.0, 18.0, 11.0, 4.0, -3.0, -11.0, -18.0, -25.0, -32.0, -39.0, -46.0, -54.0, -61.0, -68.0, -75.0, -82.0, -89.0, -97.0},
-     {25.0, 17.0, 10.0, 3.0, -4.0, -11.0, -19.0, -26.0, -33.0, -40.0, -48.0, -55.0, -62.0, -69.0, -76.0, -84.0, -91.0, -98.0}
-    };
-
-    private final void _deleteFile(String filename) {
+    private static final String H5_MULTI_FILE  = "testPfmulti";
+    private static char MULTI_LETTERS[]        = {'X', 's', 'b', 'r', 'g', 'l', 'o'};
+    private static final int DIM_X             = 4;
+    private static final int DIM_Y             = 6;
+    private static final int DIMF_X            = 12;
+    private static final int DIMF_Y            = 18;
+    long H5fid                                 = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                                = HDF5Constants.H5I_INVALID_HID;
+    long H5did                                 = HDF5Constants.H5I_INVALID_HID;
+    long H5Fdsid                               = HDF5Constants.H5I_INVALID_HID;
+    long H5Fdid                                = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                              = {DIM_X, DIM_Y};
+    long fapl_id                               = HDF5Constants.H5I_INVALID_HID;
+    long plapl_id                              = HDF5Constants.H5I_INVALID_HID;
+    long dapl_id                               = HDF5Constants.H5I_INVALID_HID;
+    long plist_id                              = HDF5Constants.H5I_INVALID_HID;
+    long btplist_id                            = HDF5Constants.H5I_INVALID_HID;
+    long[] H5Fdims                             = {DIMF_X, DIMF_Y};
+    double windchillF[][] = {{36.0, 31.0, 25.0, 19.0, 13.0, 7.0, 1.0, -5.0, -11.0, -16.0, -22.0, -28.0, -34.0,
+                              -40.0, -46.0, -52.0, -57.0, -63.0},
+                             {34.0, 27.0, 21.0, 15.0, 9.0, 3.0, -4.0, -10.0, -16.0, -22.0, -28.0, -35.0,
+                              -41.0, -47.0, -53.0, -59.0, -66.0, -72.0},
+                             {32.0, 25.0, 19.0, 13.0, 6.0, 0.0, -7.0, -13.0, -19.0, -26.0, -32.0, -39.0,
+                              -45.0, -51.0, -58.0, -64.0, -71.0, -77.0},
+                             {30.0, 24.0, 17.0, 11.0, 4.0, -2.0, -9.0, -15.0, -22.0, -29.0, -35.0, -42.0,
+                              -48.0, -55.0, -61.0, -68.0, -74.0, -81.0},
+                             {29.0, 23.0, 16.0, 9.0, 3.0, -4.0, -11.0, -17.0, -24.0, -31.0, -37.0, -44.0,
+                              -51.0, -58.0, -64.0, -71.0, -78.0, -84.0},
+                             {28.0, 22.0, 15.0, 8.0, 1.0, -5.0, -12.0, -19.0, -26.0, -33.0, -39.0, -46.0,
+                              -53.0, -60.0, -67.0, -73.0, -80.0, -87.0},
+                             {28.0, 21.0, 14.0, 7.0, 0.0, -7.0, -14.0, -21.0, -27.0, -34.0, -41.0, -48.0,
+                              -55.0, -62.0, -69.0, -76.0, -82.0, -89.0},
+                             {27.0, 20.0, 13.0, 6.0, -1.0, -8.0, -15.0, -22.0, -29.0, -36.0, -43.0, -50.0,
+                              -57.0, -64.0, -71.0, -78.0, -84.0, -91.0},
+                             {26.0, 19.0, 12.0, 5.0, -2.0, -9.0, -16.0, -23.0, -30.0, -37.0, -44.0, -51.0,
+                              -58.0, -65.0, -72.0, -79.0, -86.0, -93.0},
+                             {26.0, 19.0, 12.0, 4.0, -3.0, -10.0, -17.0, -24.0, -31.0, -38.0, -45.0, -52.0,
+                              -60.0, -67.0, -74.0, -81.0, -88.0, -95.0},
+                             {25.0, 18.0, 11.0, 4.0, -3.0, -11.0, -18.0, -25.0, -32.0, -39.0, -46.0, -54.0,
+                              -61.0, -68.0, -75.0, -82.0, -89.0, -97.0},
+                             {25.0, 17.0, 10.0, 3.0, -4.0, -11.0, -19.0, -26.0, -33.0, -40.0, -48.0, -55.0,
+                              -62.0, -69.0, -76.0, -84.0, -91.0, -98.0}};
+
+    private final void _deleteFile(String filename)
+    {
         File file = null;
         try {
             file = new File(filename);
         }
-        catch (Throwable err) {}
+        catch (Throwable err) {
+        }
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final void _deleteLogFile() {
+    private final void _deleteLogFile()
+    {
         File file = null;
         try {
             file = new File(H5_LOG_FILE);
         }
-        catch (Throwable err) {}
+        catch (Throwable err) {
+        }
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final void _deleteFamilyFile() {
+    private final void _deleteFamilyFile()
+    {
         File file = null;
-        for(int indx = 0; ;indx++) {
+        for (int indx = 0;; indx++) {
             java.text.DecimalFormat myFormat = new java.text.DecimalFormat("00000");
             try {
-                file = new File("test"+myFormat.format(Integer.valueOf(indx))+".h5");
+                file = new File("test" + myFormat.format(Integer.valueOf(indx)) + ".h5");
+            }
+            catch (Throwable err) {
             }
-            catch (Throwable err) {}
 
             if (file.exists()) {
-                try {file.delete();} catch (SecurityException e) {}
+                try {
+                    file.delete();
+                }
+                catch (SecurityException e) {
+                }
             }
             else
                 return;
         }
     }
 
-    private final void _deleteMultiFile() {
+    private final void _deleteMultiFile()
+    {
         File file = null;
-        for(int indx = 1;indx<7;indx++) {
+        for (int indx = 1; indx < 7; indx++) {
             try {
-                file = new File(H5_MULTI_FILE+"-"+MULTI_LETTERS[indx]+".h5");
+                file = new File(H5_MULTI_FILE + "-" + MULTI_LETTERS[indx] + ".h5");
+            }
+            catch (Throwable err) {
             }
-            catch (Throwable err) {}
 
             if (file.exists()) {
-                try {file.delete();} catch (SecurityException e) {}
+                try {
+                    file.delete();
+                }
+                catch (SecurityException e) {
+                }
             }
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -143,11 +179,13 @@ public class TestH5Pfapl {
         return did;
     }
 
-    private final void _createFloatDataset() {
+    private final void _createFloatDataset()
+    {
         try {
             H5Fdsid = H5.H5Screate_simple(2, H5Fdims, null);
-            H5Fdid = H5.H5Dcreate(H5fid, "dsfloat", HDF5Constants.H5T_NATIVE_FLOAT, H5Fdsid,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5Fdid =
+                H5.H5Dcreate(H5fid, "dsfloat", HDF5Constants.H5T_NATIVE_FLOAT, H5Fdsid,
+                             HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -163,7 +201,8 @@ public class TestH5Pfapl {
         }
     }
 
-    private final void _createH5multiFileDS() {
+    private final void _createH5multiFileDS()
+    {
         try {
             H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
         }
@@ -181,12 +220,12 @@ public class TestH5Pfapl {
         }
     }
 
-    private final void _createH5File(long fapl) {
+    private final void _createH5File(long fapl)
+    {
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, fapl);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, fapl);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
-            H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+            H5did  = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -204,12 +243,13 @@ public class TestH5Pfapl {
         }
     }
 
-    private final void _createH5familyFile(long fapl) {
+    private final void _createH5familyFile(long fapl)
+    {
         try {
-            H5fid = H5.H5Fcreate(H5_FAMILY_FILE+".h5", HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, fapl);
+            H5fid  = H5.H5Fcreate(H5_FAMILY_FILE + ".h5", HDF5Constants.H5F_ACC_TRUNC,
+                                 HDF5Constants.H5P_DEFAULT, fapl);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
-            H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+            H5did  = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -227,10 +267,10 @@ public class TestH5Pfapl {
         }
     }
 
-    private final void _createH5multiFile(long fapl) {
+    private final void _createH5multiFile(long fapl)
+    {
         try {
-            H5fid = H5.H5Fcreate(H5_MULTI_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, fapl);
+            H5fid = H5.H5Fcreate(H5_MULTI_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, fapl);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
         }
         catch (Throwable err) {
@@ -248,22 +288,16 @@ public class TestH5Pfapl {
         }
     }
 
-    public void deleteH5file() {
-        _deleteFile(H5_FILE);
-    }
+    public void deleteH5file() { _deleteFile(H5_FILE); }
 
-    public void deleteH5familyfile() {
-        _deleteFamilyFile();
-    }
+    public void deleteH5familyfile() { _deleteFamilyFile(); }
 
-    public void deleteH5multifile() {
-        _deleteMultiFile();
-    }
+    public void deleteH5multifile() { _deleteMultiFile(); }
 
     @Before
-    public void createFileAccess()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createFileAccess() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
@@ -283,9 +317,9 @@ public class TestH5Pfapl {
         }
         assertTrue(plapl_id > 0);
         try {
-            plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+            plist_id   = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
             btplist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
-            dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
+            dapl_id    = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -297,34 +331,76 @@ public class TestH5Pfapl {
     }
 
     @After
-    public void deleteFileAccess() throws HDF5LibraryException {
+    public void deleteFileAccess() throws HDF5LibraryException
+    {
         if (fapl_id > 0)
-            try {H5.H5Pclose(fapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(fapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (plapl_id > 0)
-            try {H5.H5Pclose(plapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (dapl_id > 0)
-            try {H5.H5Pclose(dapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(dapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (plist_id > 0)
-            try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plist_id);
+            }
+            catch (Exception ex) {
+            }
         if (btplist_id > 0)
-            try {H5.H5Pclose(btplist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(btplist_id);
+            }
+            catch (Exception ex) {
+            }
 
         if (H5Fdsid > 0)
-            try {H5.H5Sclose(H5Fdsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5Fdsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5Fdid > 0)
-            try {H5.H5Dclose(H5Fdid);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5Fdid);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did > 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
     @Test
-    public void testH5Pget_libver_bounds() {
-        int ret_val = -1;
+    public void testH5Pget_libver_bounds()
+    {
+        int ret_val  = -1;
         int[] libver = new int[2];
 
         try {
@@ -342,11 +418,12 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pset_libver_bounds() {
+    public void testH5Pset_libver_bounds()
+    {
 
-        int ret_val = -1;
-        int low = HDF5Constants.H5F_LIBVER_EARLIEST;
-        int high = HDF5Constants.H5F_LIBVER_LATEST;
+        int ret_val  = -1;
+        int low      = HDF5Constants.H5F_LIBVER_EARLIEST;
+        int high     = HDF5Constants.H5F_LIBVER_LATEST;
         int[] libver = new int[2];
 
         try {
@@ -365,15 +442,17 @@ public class TestH5Pfapl {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Pset_elink_fapl_NegativeID() throws Throwable {
-        H5.H5Pset_elink_fapl(-1, fapl_id );
+    public void testH5Pset_elink_fapl_NegativeID() throws Throwable
+    {
+        H5.H5Pset_elink_fapl(-1, fapl_id);
     }
 
     @Test
-    public void testH5Pset_elink_fapl() {
+    public void testH5Pset_elink_fapl()
+    {
         int ret_val = -1;
         try {
-            ret_val = H5.H5Pset_elink_fapl(plapl_id, fapl_id );
+            ret_val = H5.H5Pset_elink_fapl(plapl_id, fapl_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -383,12 +462,13 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pget_elink_fapl() {
+    public void testH5Pget_elink_fapl()
+    {
         long ret_val_id = HDF5Constants.H5I_INVALID_HID;
         try {
             ret_val_id = H5.H5Pget_elink_fapl(plapl_id);
             assertTrue("H5Pget_elink_fapl", ret_val_id >= 0);
-            assertEquals(HDF5Constants.H5P_DEFAULT, ret_val_id );
+            assertEquals(HDF5Constants.H5P_DEFAULT, ret_val_id);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -396,15 +476,20 @@ public class TestH5Pfapl {
         }
         finally {
             if (ret_val_id > 0)
-                try {H5.H5Pclose(ret_val_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Pclose(ret_val_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5P_elink_fapl() {
+    public void testH5P_elink_fapl()
+    {
         long ret_val_id = HDF5Constants.H5I_INVALID_HID;
         try {
-            H5.H5Pset_elink_fapl(plapl_id, fapl_id );
+            H5.H5Pset_elink_fapl(plapl_id, fapl_id);
             ret_val_id = H5.H5Pget_elink_fapl(plapl_id);
             assertTrue("H5P_elink_fapl", ret_val_id >= 0);
         }
@@ -414,16 +499,21 @@ public class TestH5Pfapl {
         }
         finally {
             if (ret_val_id > 0)
-                try {H5.H5Pclose(ret_val_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Pclose(ret_val_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5P_elink_file_cache_size() {
+    public void testH5P_elink_file_cache_size()
+    {
         long elink_fapl_id = HDF5Constants.H5I_INVALID_HID;
-        int efc_size = 0;
+        int efc_size       = 0;
         try {
-            H5.H5Pset_elink_fapl(plapl_id, fapl_id );
+            H5.H5Pset_elink_fapl(plapl_id, fapl_id);
             elink_fapl_id = H5.H5Pget_elink_fapl(plapl_id);
             assertTrue("H5P_elink_file_cache_size", elink_fapl_id >= 0);
             try {
@@ -449,15 +539,20 @@ public class TestH5Pfapl {
         }
         finally {
             if (elink_fapl_id > 0)
-                try {H5.H5Pclose(elink_fapl_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Pclose(elink_fapl_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5P_btree_ratios() {
-        double[] left = {0.1};
+    public void testH5P_btree_ratios()
+    {
+        double[] left   = {0.1};
         double[] middle = {0.5};
-        double[] right = {0.7};
+        double[] right  = {0.7};
         try {
             H5.H5Pset_btree_ratios(plist_id, left[0], middle[0], right[0]);
             H5.H5Pget_btree_ratios(plist_id, left, middle, right);
@@ -470,7 +565,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_edc_check() {
+    public void testH5P_edc_check()
+    {
         int ret_val_id = -1;
         try {
             ret_val_id = H5.H5Pget_edc_check(plist_id);
@@ -486,7 +582,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_fclose_degree() {
+    public void testH5P_fclose_degree()
+    {
         int ret_val_id = -1;
         try {
             ret_val_id = H5.H5Pget_fclose_degree(fapl_id);
@@ -517,8 +614,9 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_alignment() {
-        long[] align = {0,0};
+    public void testH5P_alignment()
+    {
+        long[] align = {0, 0};
         try {
             H5.H5Pget_alignment(fapl_id, align);
             assertTrue("H5P_alignment threshold default", align[0] == 1);
@@ -543,7 +641,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_meta_block_size() {
+    public void testH5P_meta_block_size()
+    {
         long meta_size = 0;
         try {
             meta_size = H5.H5Pget_meta_block_size(fapl_id);
@@ -566,7 +665,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_small_data_block_size() {
+    public void testH5P_small_data_block_size()
+    {
         long align = 0;
         try {
             align = H5.H5Pget_small_data_block_size(fapl_id);
@@ -589,7 +689,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_hyper_vector_size() {
+    public void testH5P_hyper_vector_size()
+    {
         long[] align = {0};
         try {
             H5.H5Pget_hyper_vector_size(plist_id, align);
@@ -612,14 +713,15 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_cache() {
+    public void testH5P_cache()
+    {
         long[] rdcc_nelmts = {0};
         long[] rdcc_nbytes = {0};
-        double[] rdcc_w0 = {0};
+        double[] rdcc_w0   = {0};
         try {
             H5.H5Pget_cache(fapl_id, null, rdcc_nelmts, rdcc_nbytes, rdcc_w0);
             assertTrue("H5P_cache default", rdcc_nelmts[0] == 521);
-            assertTrue("H5P_cache default", rdcc_nbytes[0] == (1024*1024));
+            assertTrue("H5P_cache default", rdcc_nbytes[0] == (1024 * 1024));
             assertTrue("H5P_cache default", rdcc_w0[0] == 0.75);
         }
         catch (Throwable err) {
@@ -639,14 +741,15 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_chunk_cache() {
+    public void testH5P_chunk_cache()
+    {
         long[] rdcc_nslots = {0};
         long[] rdcc_nbytes = {0};
-        double[] rdcc_w0 = {0};
+        double[] rdcc_w0   = {0};
         try {
             H5.H5Pget_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0);
             assertTrue("H5P_chunk_cache default", rdcc_nslots[0] == 521);
-            assertTrue("H5P_chunk_cache default", rdcc_nbytes[0] == (1024*1024));
+            assertTrue("H5P_chunk_cache default", rdcc_nbytes[0] == (1024 * 1024));
             assertTrue("H5P_chunk_cache default", rdcc_w0[0] == 0.75);
         }
         catch (Throwable err) {
@@ -666,11 +769,12 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_sieve_buf_size() {
+    public void testH5P_sieve_buf_size()
+    {
         long buf_size = 0;
         try {
             buf_size = H5.H5Pget_sieve_buf_size(fapl_id);
-            assertTrue("H5P_sieve_buf_size default", buf_size == (64*1024));
+            assertTrue("H5P_sieve_buf_size default", buf_size == (64 * 1024));
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -689,7 +793,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_gc_references() {
+    public void testH5P_gc_references()
+    {
         boolean ret_val_id = false;
         try {
             H5.H5Pset_gc_references(fapl_id, true);
@@ -703,11 +808,13 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pget_mdc_config() {
+    public void testH5Pget_mdc_config()
+    {
         H5AC_cache_config_t cache_config = null;
         try {
             cache_config = H5.H5Pget_mdc_config(fapl_id);
-            assertTrue("H5Pget_mdc_config", cache_config.version==HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
+            assertTrue("H5Pget_mdc_config",
+                       cache_config.version == HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -716,11 +823,13 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pset_mdc_config() {
+    public void testH5Pset_mdc_config()
+    {
         H5AC_cache_config_t cache_config = null;
         try {
             cache_config = H5.H5Pget_mdc_config(fapl_id);
-            assertTrue("H5Pset_mdc_config", cache_config.version==HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
+            assertTrue("H5Pset_mdc_config",
+                       cache_config.version == HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -730,8 +839,9 @@ public class TestH5Pfapl {
             cache_config.decr_mode = HDF5Constants.H5C_decr_off;
             H5.H5Pset_mdc_config(fapl_id, cache_config);
             cache_config = H5.H5Pget_mdc_config(fapl_id);
-            assertTrue("H5Pset_mdc_config", cache_config.version==HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
-            assertTrue("H5Pset_mdc_config", cache_config.decr_mode==HDF5Constants.H5C_decr_off);
+            assertTrue("H5Pset_mdc_config",
+                       cache_config.version == HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
+            assertTrue("H5Pset_mdc_config", cache_config.decr_mode == HDF5Constants.H5C_decr_off);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -740,24 +850,25 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_fapl_core() {
+    public void testH5P_fapl_core()
+    {
         if (HDF5Constants.H5FD_CORE < 0)
             return;
         try {
             H5.H5Pset_fapl_core(fapl_id, 4096, false);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: core = "+ driver_type, HDF5Constants.H5FD_CORE==driver_type);
+            assertTrue("H5Pget_driver: core = " + driver_type, HDF5Constants.H5FD_CORE == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pset_fapl_core: " + err);
         }
         try {
-            long[] increment = {-1};
+            long[] increment       = {-1};
             boolean[] backingstore = {true};
             H5.H5Pget_fapl_core(fapl_id, increment, backingstore);
-            assertTrue("H5Pget_fapl_core: increment="+increment[0], increment[0]==4096);
-            assertTrue("H5Pget_fapl_core: backingstore="+backingstore[0], !backingstore[0]);
+            assertTrue("H5Pget_fapl_core: increment=" + increment[0], increment[0] == 4096);
+            assertTrue("H5Pget_fapl_core: backingstore=" + backingstore[0], !backingstore[0]);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -766,13 +877,14 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_fapl_family() {
+    public void testH5P_fapl_family()
+    {
         if (HDF5Constants.H5FD_FAMILY < 0)
             return;
         try {
             H5.H5Pset_fapl_family(fapl_id, 1024, HDF5Constants.H5P_DEFAULT);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: family = "+ driver_type, HDF5Constants.H5FD_FAMILY==driver_type);
+            assertTrue("H5Pget_driver: family = " + driver_type, HDF5Constants.H5FD_FAMILY == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -782,8 +894,9 @@ public class TestH5Pfapl {
             long[] member_size = {0};
             long[] member_fapl = {-1};
             H5.H5Pget_fapl_family(fapl_id, member_size, member_fapl);
-            assertTrue("H5Pget_fapl_family: member_size="+member_size[0], member_size[0]==1024);
-            assertTrue("H5Pget_fapl_family: member_fapl ", H5.H5P_equal(member_fapl[0], HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
+            assertTrue("H5Pget_fapl_family: member_size=" + member_size[0], member_size[0] == 1024);
+            assertTrue("H5Pget_fapl_family: member_fapl ",
+                       H5.H5P_equal(member_fapl[0], HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -794,13 +907,14 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_family_offset() {
+    public void testH5P_family_offset()
+    {
         if (HDF5Constants.H5FD_FAMILY < 0)
             return;
         try {
             H5.H5Pset_fapl_family(fapl_id, 1024, HDF5Constants.H5P_DEFAULT);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: family = "+ driver_type, HDF5Constants.H5FD_FAMILY==driver_type);
+            assertTrue("H5Pget_driver: family = " + driver_type, HDF5Constants.H5FD_FAMILY == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -817,7 +931,7 @@ public class TestH5Pfapl {
         }
         try {
             long offset = H5.H5Pget_family_offset(fapl_id);
-            assertTrue("H5Pget_fapl_family: offset="+offset, offset==family_offset);
+            assertTrue("H5Pget_fapl_family: offset=" + offset, offset == family_offset);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -827,13 +941,14 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pset_fapl_sec2() {
+    public void testH5Pset_fapl_sec2()
+    {
         if (HDF5Constants.H5FD_SEC2 < 0)
             return;
         try {
             H5.H5Pset_fapl_sec2(fapl_id);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: sec2 = "+ driver_type, HDF5Constants.H5FD_SEC2==driver_type);
+            assertTrue("H5Pget_driver: sec2 = " + driver_type, HDF5Constants.H5FD_SEC2 == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -844,13 +959,14 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pset_fapl_stdio() {
+    public void testH5Pset_fapl_stdio()
+    {
         if (HDF5Constants.H5FD_STDIO < 0)
             return;
         try {
             H5.H5Pset_fapl_stdio(fapl_id);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: stdio = "+ driver_type, HDF5Constants.H5FD_STDIO==driver_type);
+            assertTrue("H5Pget_driver: stdio = " + driver_type, HDF5Constants.H5FD_STDIO == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -861,14 +977,15 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pset_fapl_log() {
+    public void testH5Pset_fapl_log()
+    {
         if (HDF5Constants.H5FD_LOG < 0)
             return;
         try {
             long log_flags = HDF5Constants.H5FD_LOG_LOC_IO;
             H5.H5Pset_fapl_log(fapl_id, H5_LOG_FILE, log_flags, 1024);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: log = "+ driver_type, HDF5Constants.H5FD_LOG==driver_type);
+            assertTrue("H5Pget_driver: log = " + driver_type, HDF5Constants.H5FD_LOG == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -880,19 +997,20 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_fapl_muti_nulls() {
+    public void testH5P_fapl_muti_nulls()
+    {
         if (HDF5Constants.H5FD_MULTI < 0)
             return;
 
-        int[] member_map = null;
-        long[] member_fapl = null;
+        int[] member_map     = null;
+        long[] member_fapl   = null;
         String[] member_name = null;
-        long[] member_addr = null;
+        long[] member_addr   = null;
 
         try {
             H5.H5Pset_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr, true);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: multi = "+ driver_type, HDF5Constants.H5FD_MULTI==driver_type);
+            assertTrue("H5Pget_driver: multi = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -911,53 +1029,68 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_fapl_muti_defaults() {
+    public void testH5P_fapl_muti_defaults()
+    {
         if (HDF5Constants.H5FD_MULTI < 0)
             return;
         int H5FD_MEM_NTYPES = HDF5Constants.H5FD_MEM_NTYPES; // 7
 
         long sH5FD_MEM_DEFAULT_HADDR = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
-        long sH5FD_MEM_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_SIZE;
-        long sH5FD_MEM_SUPER_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_SUPER_SIZE;
-        long sH5FD_MEM_BTREE_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_BTREE_SIZE;
-        long sH5FD_MEM_DRAW_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_DRAW_SIZE;
-        long sH5FD_MEM_GHEAP_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_GHEAP_SIZE;
-        long sH5FD_MEM_LHEAP_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_LHEAP_SIZE;
-        long sH5FD_MEM_OHDR_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_OHDR_SIZE;
-        int[] member_map = null;
-        long[] member_fapl = null;
-        String[] member_name = null;
-        long[] member_addr = null;
+        long sH5FD_MEM_HADDR         = HDF5Constants.H5FD_MEM_DEFAULT_SIZE;
+        long sH5FD_MEM_SUPER_HADDR   = HDF5Constants.H5FD_MEM_DEFAULT_SUPER_SIZE;
+        long sH5FD_MEM_BTREE_HADDR   = HDF5Constants.H5FD_MEM_DEFAULT_BTREE_SIZE;
+        long sH5FD_MEM_DRAW_HADDR    = HDF5Constants.H5FD_MEM_DEFAULT_DRAW_SIZE;
+        long sH5FD_MEM_GHEAP_HADDR   = HDF5Constants.H5FD_MEM_DEFAULT_GHEAP_SIZE;
+        long sH5FD_MEM_LHEAP_HADDR   = HDF5Constants.H5FD_MEM_DEFAULT_LHEAP_SIZE;
+        long sH5FD_MEM_OHDR_HADDR    = HDF5Constants.H5FD_MEM_DEFAULT_OHDR_SIZE;
+        int[] member_map             = null;
+        long[] member_fapl           = null;
+        String[] member_name         = null;
+        long[] member_addr           = null;
 
         try {
             H5.H5Pset_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr, true);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: multi = "+ driver_type, HDF5Constants.H5FD_MULTI==driver_type);
+            assertTrue("H5Pget_driver: multi = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pset_fapl_muti: " + err);
         }
         try {
-            member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
-            member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
-            member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
-            member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
+            member_map    = new int[HDF5Constants.H5FD_MEM_NTYPES];
+            member_fapl   = new long[HDF5Constants.H5FD_MEM_NTYPES];
+            member_name   = new String[HDF5Constants.H5FD_MEM_NTYPES];
+            member_addr   = new long[HDF5Constants.H5FD_MEM_NTYPES];
             boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
             assertTrue("H5Pget_fapl_muti: relax ", relax);
-            assertTrue("H5Pget_fapl_muti: member_map="+member_map[HDF5Constants.H5FD_MEM_DEFAULT], member_map[HDF5Constants.H5FD_MEM_DEFAULT] == HDF5Constants.H5FD_MEM_DEFAULT);
-            assertTrue("H5Pget_fapl_muti: member_fapl ", H5.H5P_equal(member_fapl[HDF5Constants.H5FD_MEM_DEFAULT], HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
-            assertTrue("H5Pget_fapl_muti: member_name="+member_name[HDF5Constants.H5FD_MEM_DEFAULT], member_name[HDF5Constants.H5FD_MEM_DEFAULT].compareTo("%s-X.h5")==0);
-            assertTrue("H5Pget_fapl_muti: member_name="+member_name[HDF5Constants.H5FD_MEM_SUPER], member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-s.h5")==0);
-            assertTrue("H5Pget_fapl_muti: member_name="+member_name[HDF5Constants.H5FD_MEM_BTREE], member_name[HDF5Constants.H5FD_MEM_BTREE].compareTo("%s-b.h5")==0);
-            assertTrue("H5Pget_fapl_muti: member_name="+member_name[HDF5Constants.H5FD_MEM_DRAW], member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-r.h5")==0);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_DEFAULT], member_addr[HDF5Constants.H5FD_MEM_DEFAULT] == sH5FD_MEM_HADDR);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_SUPER], member_addr[HDF5Constants.H5FD_MEM_SUPER] == sH5FD_MEM_SUPER_HADDR);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_BTREE], member_addr[HDF5Constants.H5FD_MEM_BTREE] == sH5FD_MEM_BTREE_HADDR);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_DRAW], member_addr[HDF5Constants.H5FD_MEM_DRAW] == sH5FD_MEM_DRAW_HADDR);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_GHEAP], member_addr[HDF5Constants.H5FD_MEM_GHEAP] == sH5FD_MEM_GHEAP_HADDR);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_LHEAP], member_addr[HDF5Constants.H5FD_MEM_LHEAP] == sH5FD_MEM_LHEAP_HADDR);
-            assertTrue("H5Pget_fapl_muti: member_addr="+member_addr[HDF5Constants.H5FD_MEM_OHDR], member_addr[HDF5Constants.H5FD_MEM_OHDR] == sH5FD_MEM_OHDR_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_DEFAULT],
+                       member_map[HDF5Constants.H5FD_MEM_DEFAULT] == HDF5Constants.H5FD_MEM_DEFAULT);
+            assertTrue("H5Pget_fapl_muti: member_fapl ",
+                       H5.H5P_equal(member_fapl[HDF5Constants.H5FD_MEM_DEFAULT],
+                                    HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
+            assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_DEFAULT],
+                       member_name[HDF5Constants.H5FD_MEM_DEFAULT].compareTo("%s-X.h5") == 0);
+            assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_SUPER],
+                       member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-s.h5") == 0);
+            assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_BTREE],
+                       member_name[HDF5Constants.H5FD_MEM_BTREE].compareTo("%s-b.h5") == 0);
+            assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_DRAW],
+                       member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-r.h5") == 0);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DEFAULT],
+                       member_addr[HDF5Constants.H5FD_MEM_DEFAULT] == sH5FD_MEM_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_SUPER],
+                       member_addr[HDF5Constants.H5FD_MEM_SUPER] == sH5FD_MEM_SUPER_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_BTREE],
+                       member_addr[HDF5Constants.H5FD_MEM_BTREE] == sH5FD_MEM_BTREE_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DRAW],
+                       member_addr[HDF5Constants.H5FD_MEM_DRAW] == sH5FD_MEM_DRAW_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_GHEAP],
+                       member_addr[HDF5Constants.H5FD_MEM_GHEAP] == sH5FD_MEM_GHEAP_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_LHEAP],
+                       member_addr[HDF5Constants.H5FD_MEM_LHEAP] == sH5FD_MEM_LHEAP_HADDR);
+            assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_OHDR],
+                       member_addr[HDF5Constants.H5FD_MEM_OHDR] == sH5FD_MEM_OHDR_HADDR);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -969,20 +1102,21 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_fapl_muti() {
+    public void testH5P_fapl_muti()
+    {
         if (HDF5Constants.H5FD_MULTI < 0)
             return;
         long HADDR_DEFAULT_SIZE = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
-        int[] member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
-        long[] member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
-        String[] member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
-        long[] member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
+        int[] member_map        = new int[HDF5Constants.H5FD_MEM_NTYPES];
+        long[] member_fapl      = new long[HDF5Constants.H5FD_MEM_NTYPES];
+        String[] member_name    = new String[HDF5Constants.H5FD_MEM_NTYPES];
+        long[] member_addr      = new long[HDF5Constants.H5FD_MEM_NTYPES];
 
-        for(int mt=HDF5Constants.H5FD_MEM_DEFAULT; mt= HADDR_DEFAULT_SIZE/4 || file_size <= HADDR_DEFAULT_SIZE/2);
+            assertTrue("H5Pget_fapl_muti: file_size ",
+                       file_size >= HADDR_DEFAULT_SIZE / 4 || file_size <= HADDR_DEFAULT_SIZE / 2);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1043,67 +1192,71 @@ public class TestH5Pfapl {
         }
         _createH5multiFileDS();
         deleteH5multifile();
-        File file = new File(H5_MULTI_FILE+"-super.h5");
+        File file = new File(H5_MULTI_FILE + "-super.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-btree.h5");
+        file = new File(H5_MULTI_FILE + "-btree.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-draw.h5");
+        file = new File(H5_MULTI_FILE + "-draw.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-gheap.h5");
+        file = new File(H5_MULTI_FILE + "-gheap.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
     }
 
     @Test
-    public void testH5P_fapl_split() {
+    public void testH5P_fapl_split()
+    {
         if (HDF5Constants.H5FD_MULTI < 0)
             return;
 
         try {
-            H5.H5Pset_fapl_split(fapl_id, "-meta.h5", HDF5Constants.H5P_DEFAULT, "-raw.h5", HDF5Constants.H5P_DEFAULT);
+            H5.H5Pset_fapl_split(fapl_id, "-meta.h5", HDF5Constants.H5P_DEFAULT, "-raw.h5",
+                                 HDF5Constants.H5P_DEFAULT);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: split = "+ driver_type, HDF5Constants.H5FD_MULTI==driver_type);
+            assertTrue("H5Pget_driver: split = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pset_fapl_split: " + err);
         }
         try {
-            int[] member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
-            long[] member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
+            int[] member_map     = new int[HDF5Constants.H5FD_MEM_NTYPES];
+            long[] member_fapl   = new long[HDF5Constants.H5FD_MEM_NTYPES];
             String[] member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
-            long[] member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
+            long[] member_addr   = new long[HDF5Constants.H5FD_MEM_NTYPES];
             boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
             assertTrue("H5Pget_fapl_multi: relax ", relax);
-            assertTrue("H5Pget_fapl_multi: member_name="+member_name[HDF5Constants.H5FD_MEM_SUPER], member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-meta.h5")==0);
-            assertTrue("H5Pget_fapl_multi: member_name="+member_name[HDF5Constants.H5FD_MEM_DRAW], member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-raw.h5")==0);
+            assertTrue("H5Pget_fapl_multi: member_name=" + member_name[HDF5Constants.H5FD_MEM_SUPER],
+                       member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-meta.h5") == 0);
+            assertTrue("H5Pget_fapl_multi: member_name=" + member_name[HDF5Constants.H5FD_MEM_DRAW],
+                       member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-raw.h5") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1111,34 +1264,35 @@ public class TestH5Pfapl {
         }
         _createH5multiFile(fapl_id);
         deleteH5multifile();
-        File file = new File(H5_MULTI_FILE+"-meta.h5");
+        File file = new File(H5_MULTI_FILE + "-meta.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-raw.h5");
+        file = new File(H5_MULTI_FILE + "-raw.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
     }
 
     @Test
-    public void testH5P_fapl_direct() {
+    public void testH5P_fapl_direct()
+    {
         if (HDF5Constants.H5FD_DIRECT < 0)
             return;
         try {
-            H5.H5Pset_fapl_direct(fapl_id, 1024, 4096, 8*4096);
+            H5.H5Pset_fapl_direct(fapl_id, 1024, 4096, 8 * 4096);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: direct = "+ driver_type, HDF5Constants.H5FD_DIRECT==driver_type);
+            assertTrue("H5Pget_driver: direct = " + driver_type, HDF5Constants.H5FD_DIRECT == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1147,9 +1301,9 @@ public class TestH5Pfapl {
         try {
             long[] params = {-1, -1, -1};
             H5.H5Pget_fapl_direct(fapl_id, params);
-            assertTrue("H5Pget_fapl_direct: alignment="+params[0], params[0]==1024);
-            assertTrue("H5Pget_fapl_direct: block_size="+params[1], params[1]==4096);
-            assertTrue("H5Pget_fapl_direct: cbuf_size="+params[2], params[2]==8*4096);
+            assertTrue("H5Pget_fapl_direct: alignment=" + params[0], params[0] == 1024);
+            assertTrue("H5Pget_fapl_direct: block_size=" + params[1], params[1] == 4096);
+            assertTrue("H5Pget_fapl_direct: cbuf_size=" + params[2], params[2] == 8 * 4096);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1160,13 +1314,14 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pset_fapl_windows() {
+    public void testH5Pset_fapl_windows()
+    {
         if (HDF5Constants.H5FD_WINDOWS < 0)
             return;
         try {
             H5.H5Pset_fapl_windows(fapl_id);
             long driver_type = H5.H5Pget_driver(fapl_id);
-            assertTrue("H5Pget_driver: windows = "+ driver_type, HDF5Constants.H5FD_WINDOWS==driver_type);
+            assertTrue("H5Pget_driver: windows = " + driver_type, HDF5Constants.H5FD_WINDOWS == driver_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1177,19 +1332,20 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5Pmulti_transform() {
+    public void testH5Pmulti_transform()
+    {
         if (HDF5Constants.H5FD_MULTI < 0)
             return;
-        String f_to_c = "(5/9.0)*(x-32)";
+        String f_to_c             = "(5/9.0)*(x-32)";
         double windchillFread[][] = new double[DIMF_X][DIMF_Y];
         double windchillC;
         NumberFormat formatter = new DecimalFormat("#0.000");
-        long HADDRMAX = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
+        long HADDRMAX          = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
 
-        int[] member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
-        long[] member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
+        int[] member_map     = new int[HDF5Constants.H5FD_MEM_NTYPES];
+        long[] member_fapl   = new long[HDF5Constants.H5FD_MEM_NTYPES];
         String[] member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
-        long[] member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
+        long[] member_addr   = new long[HDF5Constants.H5FD_MEM_NTYPES];
 
         try {
             H5.H5Pset_data_transform(plist_id, f_to_c);
@@ -1200,11 +1356,11 @@ public class TestH5Pfapl {
             fail("H5Pdata_transform: " + err);
         }
 
-        for(int mt=HDF5Constants.H5FD_MEM_DEFAULT; mt= HADDRMAX/4 || file_size <= HADDRMAX/2);
+            assertTrue("H5Pget_fapl_muti: file_size ",
+                       file_size >= HADDRMAX / 4 || file_size <= HADDRMAX / 2);
             _createH5multiFileDS();
             _createFloatDataset();
         }
@@ -1267,68 +1438,70 @@ public class TestH5Pfapl {
         }
         try {
             H5.H5Dwrite(H5Fdid, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    plist_id, windchillF);
+                        plist_id, windchillF);
             H5.H5Dread(H5Fdid, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                    HDF5Constants.H5P_DEFAULT, windchillFread);
+                       HDF5Constants.H5P_DEFAULT, windchillFread);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5Pdata_transform: " + err);
         }
-        for(int row = 0; row < DIMF_X; row++) {
-            for(int col = 0; col < DIMF_Y; col++) {
-                windchillC = (5/9.0)*(windchillF[row][col]-32);
-                String Cstr = formatter.format(windchillC);
+        for (int row = 0; row < DIMF_X; row++) {
+            for (int col = 0; col < DIMF_Y; col++) {
+                windchillC   = (5 / 9.0) * (windchillF[row][col] - 32);
+                String Cstr  = formatter.format(windchillC);
                 String Fread = formatter.format(windchillFread[row][col]);
-                assertTrue("H5Pdata_transform: <"+row+","+col+">"+Fread+"="+Cstr, Fread.compareTo(Cstr)==0);
+                assertTrue("H5Pdata_transform: <" + row + "," + col + ">" + Fread + "=" + Cstr,
+                           Fread.compareTo(Cstr) == 0);
             }
         }
         deleteH5multifile();
-        File file = new File(H5_MULTI_FILE+"-super.h5");
+        File file = new File(H5_MULTI_FILE + "-super.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-btree.h5");
+        file = new File(H5_MULTI_FILE + "-btree.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-draw.h5");
+        file = new File(H5_MULTI_FILE + "-draw.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
-        file = new File(H5_MULTI_FILE+"-gheap.h5");
+        file = new File(H5_MULTI_FILE + "-gheap.h5");
         if (file.exists()) {
             try {
                 file.delete();
             }
             catch (SecurityException e) {
-                ;// e.printStackTrace();
+                ; // e.printStackTrace();
             }
         }
     }
 
     @Test
-    public void testH5Fmdc_logging() {
+    public void testH5Fmdc_logging()
+    {
         boolean[] mdc_logging_status = {false, false};
-        boolean[] mdc_log_options = {false, false};
+        boolean[] mdc_log_options    = {false, false};
 
         try {
-            boolean is_enabled = true;
+            boolean is_enabled      = true;
             boolean start_on_access = false;
             H5.H5Pset_mdc_log_options(fapl_id, is_enabled, H5_LOG_FILE, start_on_access);
 
@@ -1336,7 +1509,8 @@ public class TestH5Pfapl {
             assertTrue("H5.H5Pget_mdc_log_options: is_enabled", mdc_log_options[0]);
             assertFalse("H5.H5Pget_mdc_log_options: start_on_access_out", mdc_log_options[1]);
 
-            H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST);
+            H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST,
+                                    HDF5Constants.H5F_LIBVER_LATEST);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -1370,7 +1544,7 @@ public class TestH5Pfapl {
         catch (Throwable err) {
             fail("stop H5.H5Fget_mdc_logging_status: " + err);
         }
-//        assertFalse("stop: is_enabled", mdc_logging_status[0]);
+        //        assertFalse("stop: is_enabled", mdc_logging_status[0]);
         assertFalse("stop: is_currently_logging", mdc_logging_status[1]);
 
         deleteH5file();
@@ -1378,7 +1552,8 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_evict_on_close() {
+    public void testH5P_evict_on_close()
+    {
         boolean ret_val_id = false;
         try {
             H5.H5Pset_evict_on_close(fapl_id, true);
@@ -1399,20 +1574,21 @@ public class TestH5Pfapl {
     }
 
     @Test
-    public void testH5P_file_locking() {
-        boolean use_file_locking = false;
+    public void testH5P_file_locking()
+    {
+        boolean use_file_locking             = false;
         boolean ignore_disabled_file_locking = false;
         try {
             // false values (usually not the default)
             H5.H5Pset_file_locking(fapl_id, false, false);
-            use_file_locking = H5.H5Pget_use_file_locking(fapl_id);
+            use_file_locking             = H5.H5Pget_use_file_locking(fapl_id);
             ignore_disabled_file_locking = H5.H5Pget_ignore_disabled_file_locking(fapl_id);
             assertFalse("H5P_file_locking", use_file_locking);
             assertFalse("H5P_file_locking", ignore_disabled_file_locking);
 
             // true values (typically the default)
             H5.H5Pset_file_locking(fapl_id, true, true);
-            use_file_locking = H5.H5Pget_use_file_locking(fapl_id);
+            use_file_locking             = H5.H5Pget_use_file_locking(fapl_id);
             ignore_disabled_file_locking = H5.H5Pget_ignore_disabled_file_locking(fapl_id);
             assertTrue("H5P_file_locking", use_file_locking);
             assertTrue("H5P_file_locking", ignore_disabled_file_locking);
diff --git a/java/test/TestH5Pfaplhdfs.java b/java/test/TestH5Pfaplhdfs.java
index d922666..e99967b 100644
--- a/java/test/TestH5Pfaplhdfs.java
+++ b/java/test/TestH5Pfaplhdfs.java
@@ -31,12 +31,13 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Pfaplhdfs {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
-    long fapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plapl_id = HDF5Constants.H5I_INVALID_HID;
-    long dapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plist_id = HDF5Constants.H5I_INVALID_HID;
+    long fapl_id    = HDF5Constants.H5I_INVALID_HID;
+    long plapl_id   = HDF5Constants.H5I_INVALID_HID;
+    long dapl_id    = HDF5Constants.H5I_INVALID_HID;
+    long plist_id   = HDF5Constants.H5I_INVALID_HID;
     long btplist_id = HDF5Constants.H5I_INVALID_HID;
 
     @Before
@@ -62,9 +63,9 @@ public class TestH5Pfaplhdfs {
         }
         assertTrue(plapl_id > 0);
         try {
-            plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+            plist_id   = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
             btplist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
-            dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
+            dapl_id    = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -79,15 +80,35 @@ public class TestH5Pfaplhdfs {
     public void deleteFileAccess() throws HDF5LibraryException
     {
         if (fapl_id > 0)
-            try {H5.H5Pclose(fapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(fapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (plapl_id > 0)
-            try {H5.H5Pclose(plapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (dapl_id > 0)
-            try {H5.H5Pclose(dapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(dapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (plist_id > 0)
-            try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plist_id);
+            }
+            catch (Exception ex) {
+            }
         if (btplist_id > 0)
-            try {H5.H5Pclose(btplist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(btplist_id);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
@@ -97,19 +118,21 @@ public class TestH5Pfaplhdfs {
         if (HDF5Constants.H5FD_HDFS < 0)
             throw new HDF5LibraryException("skip");
 
-        String nodename = "blues";
-        int    nodeport = 12345;
-        String username = "sparticus";
+        String nodename  = "blues";
+        int nodeport     = 12345;
+        String username  = "sparticus";
         String kerbcache = "/dev/null";
-        int    streamsize = 1024;
+        int streamsize   = 1024;
 
-        final H5FD_hdfs_fapl_t config = new H5FD_hdfs_fapl_t(nodename, nodeport, username, kerbcache, streamsize);
+        final H5FD_hdfs_fapl_t config =
+            new H5FD_hdfs_fapl_t(nodename, nodeport, username, kerbcache, streamsize);
         assertTrue("setting fapl should succeed", -1 < H5.H5Pset_fapl_hdfs(fapl_id, config));
 
         assertEquals("driver types should match", HDF5Constants.H5FD_HDFS, H5.H5Pget_driver(fapl_id));
 
         H5FD_hdfs_fapl_t copy = H5.H5Pget_fapl_hdfs(fapl_id);
-        assertEquals("fapl contents should match", new H5FD_hdfs_fapl_t(nodename, nodeport, username, kerbcache, streamsize), copy);
+        assertEquals("fapl contents should match",
+                     new H5FD_hdfs_fapl_t(nodename, nodeport, username, kerbcache, streamsize), copy);
     }
 
     @Test(expected = HDF5LibraryException.class)
@@ -125,13 +148,12 @@ public class TestH5Pfaplhdfs {
     {
         if (HDF5Constants.H5FD_HDFS < 0)
             throw new HDF5LibraryException("skip");
-        if (HDF5Constants.H5FD_SEC2 < 0 )
+        if (HDF5Constants.H5FD_SEC2 < 0)
             throw new HDF5LibraryException("skip");
-            /* TODO: for now, test against a sec2 fapl only */
+        /* TODO: for now, test against a sec2 fapl only */
 
         H5.H5Pset_fapl_sec2(fapl_id);
         assertEquals("fapl_id was not set properly", HDF5Constants.H5FD_SEC2, H5.H5Pget_driver(fapl_id));
         H5FD_hdfs_fapl_t fails = H5.H5Pget_fapl_hdfs(fapl_id);
     }
-
 }
diff --git a/java/test/TestH5Pfapls3.java b/java/test/TestH5Pfapls3.java
index dda2716..06baef2 100644
--- a/java/test/TestH5Pfapls3.java
+++ b/java/test/TestH5Pfapls3.java
@@ -31,12 +31,13 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Pfapls3 {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
-    long fapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plapl_id = HDF5Constants.H5I_INVALID_HID;
-    long dapl_id = HDF5Constants.H5I_INVALID_HID;
-    long plist_id = HDF5Constants.H5I_INVALID_HID;
+    long fapl_id    = HDF5Constants.H5I_INVALID_HID;
+    long plapl_id   = HDF5Constants.H5I_INVALID_HID;
+    long dapl_id    = HDF5Constants.H5I_INVALID_HID;
+    long plist_id   = HDF5Constants.H5I_INVALID_HID;
     long btplist_id = HDF5Constants.H5I_INVALID_HID;
 
     @Before
@@ -62,9 +63,9 @@ public class TestH5Pfapls3 {
         }
         assertTrue(plapl_id > 0);
         try {
-            plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+            plist_id   = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
             btplist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
-            dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
+            dapl_id    = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -79,15 +80,35 @@ public class TestH5Pfapls3 {
     public void deleteFileAccess() throws HDF5LibraryException
     {
         if (fapl_id > 0)
-            try {H5.H5Pclose(fapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(fapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (plapl_id > 0)
-            try {H5.H5Pclose(plapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (dapl_id > 0)
-            try {H5.H5Pclose(dapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(dapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (plist_id > 0)
-            try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plist_id);
+            }
+            catch (Exception ex) {
+            }
         if (btplist_id > 0)
-            try {H5.H5Pclose(btplist_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(btplist_id);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
@@ -98,18 +119,15 @@ public class TestH5Pfapls3 {
             return;
 
         final H5FD_ros3_fapl_t config = new H5FD_ros3_fapl_t();
-        assertEquals("Default fapl has unexpected contents",
-                new H5FD_ros3_fapl_t("", "", ""), config);
+        assertEquals("Default fapl has unexpected contents", new H5FD_ros3_fapl_t("", "", ""), config);
 
         H5.H5Pset_fapl_ros3(fapl_id, config);
 
-        assertEquals("driver types don't match",
-                HDF5Constants.H5FD_ROS3, H5.H5Pget_driver(fapl_id));
+        assertEquals("driver types don't match", HDF5Constants.H5FD_ROS3, H5.H5Pget_driver(fapl_id));
 
         /* get_fapl_ros3 can throw exception in error cases */
         H5FD_ros3_fapl_t copy = H5.H5Pget_fapl_ros3(fapl_id);
-        assertEquals("contents of fapl set and get don't match",
-                new H5FD_ros3_fapl_t("", "", ""), copy);
+        assertEquals("contents of fapl set and get don't match", new H5FD_ros3_fapl_t("", "", ""), copy);
     }
 
     @Test(expected = HDF5LibraryException.class)
@@ -125,13 +143,12 @@ public class TestH5Pfapls3 {
     {
         if (HDF5Constants.H5FD_ROS3 < 0)
             throw new HDF5LibraryException("skip");
-        if (HDF5Constants.H5FD_SEC2 < 0 )
+        if (HDF5Constants.H5FD_SEC2 < 0)
             throw new HDF5LibraryException("skip");
-            /* TODO: for now, test against a sec2 fapl only */
+        /* TODO: for now, test against a sec2 fapl only */
 
         H5.H5Pset_fapl_sec2(fapl_id);
-        assertEquals("fapl_id was not set properly",
-                HDF5Constants.H5FD_SEC2, H5.H5Pget_driver(fapl_id));
+        assertEquals("fapl_id was not set properly", HDF5Constants.H5FD_SEC2, H5.H5Pget_driver(fapl_id));
         H5FD_ros3_fapl_t fails = H5.H5Pget_fapl_ros3(fapl_id);
     }
 
@@ -147,12 +164,10 @@ public class TestH5Pfapls3 {
 
         final H5FD_ros3_fapl_t config = new H5FD_ros3_fapl_t(region, acc_id, acc_key);
         H5.H5Pset_fapl_ros3(fapl_id, config);
-        assertEquals("driver types don't match",
-                HDF5Constants.H5FD_ROS3, H5.H5Pget_driver(fapl_id));
+        assertEquals("driver types don't match", HDF5Constants.H5FD_ROS3, H5.H5Pget_driver(fapl_id));
 
         H5FD_ros3_fapl_t copy = H5.H5Pget_fapl_ros3(fapl_id);
         assertEquals("contents of fapl set and get don't match",
-                new H5FD_ros3_fapl_t(region, acc_id, acc_key), copy);
+                     new H5FD_ros3_fapl_t(region, acc_id, acc_key), copy);
     }
-
 }
diff --git a/java/test/TestH5Plist.java b/java/test/TestH5Plist.java
index 03e1c8f..d8a429b 100644
--- a/java/test/TestH5Plist.java
+++ b/java/test/TestH5Plist.java
@@ -17,11 +17,11 @@ import static org.junit.Assert.assertFalse;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
 
-import java.util.ArrayList;
 import java.io.File;
+import java.nio.charset.StandardCharsets;
 import java.text.DecimalFormat;
 import java.text.NumberFormat;
-import java.nio.charset.StandardCharsets;
+import java.util.ArrayList;
 
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
@@ -32,15 +32,15 @@ import hdf.hdf5lib.callbacks.H5P_cls_copy_func_cb;
 import hdf.hdf5lib.callbacks.H5P_cls_copy_func_t;
 import hdf.hdf5lib.callbacks.H5P_cls_create_func_cb;
 import hdf.hdf5lib.callbacks.H5P_cls_create_func_t;
-import hdf.hdf5lib.callbacks.H5P_prp_set_func_cb;
-import hdf.hdf5lib.callbacks.H5P_prp_get_func_cb;
-import hdf.hdf5lib.callbacks.H5P_prp_delete_func_cb;
-import hdf.hdf5lib.callbacks.H5P_prp_copy_func_cb;
-import hdf.hdf5lib.callbacks.H5P_prp_compare_func_cb;
-import hdf.hdf5lib.callbacks.H5P_prp_close_func_cb;
-import hdf.hdf5lib.callbacks.H5P_prp_create_func_cb;
 import hdf.hdf5lib.callbacks.H5P_iterate_cb;
 import hdf.hdf5lib.callbacks.H5P_iterate_t;
+import hdf.hdf5lib.callbacks.H5P_prp_close_func_cb;
+import hdf.hdf5lib.callbacks.H5P_prp_compare_func_cb;
+import hdf.hdf5lib.callbacks.H5P_prp_copy_func_cb;
+import hdf.hdf5lib.callbacks.H5P_prp_create_func_cb;
+import hdf.hdf5lib.callbacks.H5P_prp_delete_func_cb;
+import hdf.hdf5lib.callbacks.H5P_prp_get_func_cb;
+import hdf.hdf5lib.callbacks.H5P_prp_set_func_cb;
 import hdf.hdf5lib.exceptions.HDF5Exception;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.structs.H5AC_cache_config_t;
@@ -52,7 +52,8 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Plist {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     // Property definitions
     private static final String CLASS1_NAME = "Class 1";
@@ -63,33 +64,31 @@ public class TestH5Plist {
 
     // Property definitions
     private static final String PROP1_NAME = "Property 1";
-    private static final int    prop1_def = 10;   // Property 1 default value
-    private static final int    PROP1_SIZE = 2;
+    private static final int prop1_def     = 10; // Property 1 default value
+    private static final int PROP1_SIZE    = 2;
 
     private static final String PROP2_NAME = "Property 2";
-    private static final float  prop2_def = 3.14F;   // Property 2 default value
-    private static final int    PROP2_SIZE = 8;
+    private static final float prop2_def   = 3.14F; // Property 2 default value
+    private static final int PROP2_SIZE    = 8;
 
-    private static final String PROP3_NAME  = "Property 3";
-    private static final char[] prop3_def = {'T','e','n',' ','c','h','a','r','s',' '};   // Property 3 default value
-    private static final int    PROP3_SIZE = 10;
+    private static final String PROP3_NAME = "Property 3";
+    private static final char[] prop3_def  = {'T', 'e', 'n', ' ', 'c',
+                                             'h', 'a', 'r', 's', ' '}; // Property 3 default value
+    private static final int PROP3_SIZE    = 10;
 
-    private static final String PROP4_NAME  = "Property 4";
-    private static final double prop4_def = 1.41F;   // Property 4 default value
-    private static final int    PROP4_SIZE = 8;
+    private static final String PROP4_NAME = "Property 4";
+    private static final double prop4_def  = 1.41F; // Property 4 default value
+    private static final int PROP4_SIZE    = 8;
 
-    private static final String [] pnames = { // Names of properties for iterator
-            PROP1_NAME,
-            PROP2_NAME,
-            PROP3_NAME,
-            PROP4_NAME};
+    private static final String[] pnames = { // Names of properties for iterator
+        PROP1_NAME, PROP2_NAME, PROP3_NAME, PROP4_NAME};
 
     long plist_class_id = HDF5Constants.H5I_INVALID_HID;
 
     @Before
-    public void createPropClass()throws NullPointerException, HDF5Exception
+    public void createPropClass() throws NullPointerException, HDF5Exception
     {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         // Create a new generic class, derived from the root of the class hierarchy
         try {
@@ -103,20 +102,26 @@ public class TestH5Plist {
     }
 
     @After
-    public void deleteFileAccess() throws HDF5LibraryException {
+    public void deleteFileAccess() throws HDF5LibraryException
+    {
         if (plist_class_id > 0)
-            try {H5.H5Pclose(plist_class_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(plist_class_id);
+            }
+            catch (Exception ex) {
+            }
         System.out.println();
     }
 
     // Test basic generic property list code. Tests creating new generic classes.
     @Test
-    public void testH5P_genprop_basic_class() {
-        int         status = -1;
-        long        cid1 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
-        long        cid2 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
-        long        cid3 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
-        String      name = null;       // Name of class
+    public void testH5P_genprop_basic_class()
+    {
+        int status  = -1;
+        long cid1   = HDF5Constants.H5I_INVALID_HID; // Generic Property class ID
+        long cid2   = HDF5Constants.H5I_INVALID_HID; // Generic Property class ID
+        long cid3   = HDF5Constants.H5I_INVALID_HID; // Generic Property class ID
+        String name = null;                          // Name of class
 
         try {
             // Check class name
@@ -127,7 +132,8 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pget_class_name plist_class_id: " + err);
             }
-            assertTrue("Class names don't match!, "+name+"="+CLASS1_NAME+"\n", name.compareTo(CLASS1_NAME)==0);
+            assertTrue("Class names don't match!, " + name + "=" + CLASS1_NAME + "\n",
+                       name.compareTo(CLASS1_NAME) == 0);
 
             // Check class parent
             try {
@@ -196,7 +202,8 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pget_class_name cid1: " + err);
             }
-            assertTrue("Class names don't match!, "+name+"="+CLASS2_NAME+"\n", name.compareTo(CLASS2_NAME)==0);
+            assertTrue("Class names don't match!, " + name + "=" + CLASS2_NAME + "\n",
+                       name.compareTo(CLASS2_NAME) == 0);
 
             // Check class parent
             try {
@@ -270,20 +277,33 @@ public class TestH5Plist {
         }
         finally {
             if (cid3 > 0)
-                try {H5.H5Pclose_class(cid3);} catch (Throwable err) {}
+                try {
+                    H5.H5Pclose_class(cid3);
+                }
+                catch (Throwable err) {
+                }
             if (cid2 > 0)
-                try {H5.H5Pclose_class(cid2);} catch (Throwable err) {}
+                try {
+                    H5.H5Pclose_class(cid2);
+                }
+                catch (Throwable err) {
+                }
             if (cid1 > 0)
-                try {H5.H5Pclose_class(cid1);} catch (Throwable err) {}
+                try {
+                    H5.H5Pclose_class(cid1);
+                }
+                catch (Throwable err) {
+                }
         }
     }
 
     // Test basic generic property list code. Tests adding properties to generic classes.
     @Test
-    public void testH5P_genprop_basic_class_prop() {
-        boolean     status = false;
-        long        size = -1;        // Generic Property size
-        long        nprops = -1;      // Generic Property class number
+    public void testH5P_genprop_basic_class_prop()
+    {
+        boolean status = false;
+        long size      = -1; // Generic Property size
+        long nprops    = -1; // Generic Property class number
 
         // Check the number of properties in class
         try {
@@ -293,7 +313,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==0);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 0);
 
         // Check the existence of the first property (should fail)
         try {
@@ -303,7 +323,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pexist plist_class_id: " + err);
         }
-        assertFalse("H5Pexist plist_class_id "+PROP1_NAME, status);
+        assertFalse("H5Pexist plist_class_id " + PROP1_NAME, status);
 
         // Insert first property into class (with no callbacks)
         try {
@@ -313,7 +333,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP1_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP1_NAME + err);
         }
 
         // Try to insert the first property again (should fail)
@@ -321,7 +341,7 @@ public class TestH5Plist {
             byte[] prop_value = HDFNativeData.intToByte(prop1_def);
 
             H5.H5Pregister2_nocb(plist_class_id, PROP1_NAME, PROP1_SIZE, prop_value);
-            fail("H5Pregister2 plist_class_id: "+PROP1_NAME);
+            fail("H5Pregister2 plist_class_id: " + PROP1_NAME);
         }
         catch (Throwable err) {
         }
@@ -334,7 +354,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pexist plist_class_id: " + err);
         }
-        assertTrue("H5Pexist plist_class_id "+PROP1_NAME, status);
+        assertTrue("H5Pexist plist_class_id " + PROP1_NAME, status);
 
         // Check the size of the first property
         try {
@@ -344,7 +364,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_size PROP1_NAME: " + err);
         }
-        assertTrue("H5Pget_size "+PROP1_NAME +" size: "+size, size == PROP1_SIZE);
+        assertTrue("H5Pget_size " + PROP1_NAME + " size: " + size, size == PROP1_SIZE);
 
         // Check the number of properties in class
         try {
@@ -354,7 +374,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==1);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 1);
 
         // Insert second property into class (with no callbacks)
         try {
@@ -364,7 +384,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP2_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP2_NAME + err);
         }
 
         // Try to insert the second property again (should fail)
@@ -372,7 +392,7 @@ public class TestH5Plist {
             byte[] prop_value = HDFNativeData.floatToByte(prop2_def);
 
             H5.H5Pregister2_nocb(plist_class_id, PROP2_NAME, PROP2_SIZE, prop_value);
-            fail("H5Pregister2 plist_class_id: "+PROP2_NAME);
+            fail("H5Pregister2 plist_class_id: " + PROP2_NAME);
         }
         catch (Throwable err) {
         }
@@ -385,7 +405,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pexist plist_class_id: " + err);
         }
-        assertTrue("H5Pexist plist_class_id "+PROP2_NAME, status);
+        assertTrue("H5Pexist plist_class_id " + PROP2_NAME, status);
 
         // Check the size of the second property
         try {
@@ -395,7 +415,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_size PROP2_NAME: " + err);
         }
-        assertTrue("H5Pget_size "+PROP2_NAME +" size: "+size, size == PROP2_SIZE);
+        assertTrue("H5Pget_size " + PROP2_NAME + " size: " + size, size == PROP2_SIZE);
 
         // Check the number of properties in class
         try {
@@ -405,7 +425,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==2);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 2);
 
         // Insert third property into class (with no callbacks)
         try {
@@ -415,7 +435,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP3_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP3_NAME + err);
         }
 
         // Check the existence of the third property
@@ -426,7 +446,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pexist plist_class_id: " + err);
         }
-        assertTrue("H5Pexist plist_class_id "+PROP3_NAME, status);
+        assertTrue("H5Pexist plist_class_id " + PROP3_NAME, status);
 
         // Check the size of the third property
         try {
@@ -436,7 +456,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_size PROP3_NAME: " + err);
         }
-        assertTrue("H5Pget_size "+PROP3_NAME +" size: "+size, size == PROP3_SIZE);
+        assertTrue("H5Pget_size " + PROP3_NAME + " size: " + size, size == PROP3_SIZE);
 
         // Check the number of properties in class
         try {
@@ -446,7 +466,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==3);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 3);
 
         // Unregister first property
         try {
@@ -454,7 +474,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Punregister plist_class_id: "+PROP1_NAME + err);
+            fail("H5Punregister plist_class_id: " + PROP1_NAME + err);
         }
 
         // Try to check the size of the first property (should fail)
@@ -473,7 +493,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==2);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 2);
 
         // Unregister second property
         try {
@@ -481,7 +501,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Punregister plist_class_id: "+PROP2_NAME + err);
+            fail("H5Punregister plist_class_id: " + PROP2_NAME + err);
         }
 
         // Check the number of properties in class
@@ -492,7 +512,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==1);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 1);
 
         // Unregister third property
         try {
@@ -500,7 +520,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Punregister plist_class_id: "+PROP3_NAME + err);
+            fail("H5Punregister plist_class_id: " + PROP3_NAME + err);
         }
 
         // Check the number of properties in class
@@ -511,16 +531,18 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==0);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 0);
     }
 
     // Test basic generic property list code. Tests iterating over properties in a generic class.
     @Test
-    public void testH5P_genprop_class_iter() {
+    public void testH5P_genprop_class_iter()
+    {
         class idata {
-            public String[] iter_names= null;
-            public int iter_count = -1;
-            idata(String[] names, int count) {
+            public String[] iter_names = null;
+            public int iter_count      = -1;
+            idata(String[] names, int count)
+            {
                 this.iter_names = names;
                 this.iter_count = count;
             }
@@ -531,16 +553,17 @@ public class TestH5Plist {
         H5P_iterate_t iter_data = new H5P_iter_data();
 
         class H5P_iter_callback implements H5P_iterate_cb {
-            public int callback(long list_id, String name, H5P_iterate_t op_data) {
+            public int callback(long list_id, String name, H5P_iterate_t op_data)
+            {
                 idata id = ((H5P_iter_data)op_data).iterdata.get(0);
                 return name.compareTo(id.iter_names[id.iter_count++]);
             }
         }
         H5P_iterate_cb iter_cb = new H5P_iter_callback();
 
-        long        size = -1;        // Generic Property size
-        long        nprops = -1;      // Generic Property class number
-        int[]       idx = {0};        // Index to start iteration at
+        long size   = -1;  // Generic Property size
+        long nprops = -1;  // Generic Property class number
+        int[] idx   = {0}; // Index to start iteration at
 
         // Insert first property into class (with no callbacks) */
         try {
@@ -550,7 +573,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP1_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP1_NAME + err);
         }
 
         // Insert second property into class (with no callbacks) */
@@ -561,7 +584,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP2_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP2_NAME + err);
         }
 
         // Insert third property into class (with no callbacks) */
@@ -572,7 +595,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP3_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP3_NAME + err);
         }
 
         // Insert fourth property into class (with no callbacks) */
@@ -583,7 +606,7 @@ public class TestH5Plist {
         }
         catch (Throwable err) {
             err.printStackTrace();
-            fail("H5Pregister2 plist_class_id: "+PROP4_NAME + err);
+            fail("H5Pregister2 plist_class_id: " + PROP4_NAME + err);
         }
 
         // Check the number of properties in class */
@@ -594,7 +617,7 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5Pget_nprops plist_class_id: " + err);
         }
-        assertTrue("H5Pget_nprops: "+nprops, nprops==4);
+        assertTrue("H5Pget_nprops: " + nprops, nprops == 4);
 
         // Iterate over all properties in class */
         idata id = new idata(pnames, 0);
@@ -606,12 +629,14 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5.H5Piterate: " + err);
         }
-        assertFalse("H5Piterate ",((H5P_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Piterate "+((H5P_iter_data)iter_data).iterdata.size(),((H5P_iter_data)iter_data).iterdata.size()==1);
-        assertTrue("H5Piterate "+(((H5P_iter_data)iter_data).iterdata.get(0)).iter_count,((idata)((H5P_iter_data)iter_data).iterdata.get(0)).iter_count==4);
+        assertFalse("H5Piterate ", ((H5P_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Piterate " + ((H5P_iter_data)iter_data).iterdata.size(),
+                   ((H5P_iter_data)iter_data).iterdata.size() == 1);
+        assertTrue("H5Piterate " + (((H5P_iter_data)iter_data).iterdata.get(0)).iter_count,
+                   ((idata)((H5P_iter_data)iter_data).iterdata.get(0)).iter_count == 4);
 
         // Iterate over last three properties in class */
-        idx[0] = 1;
+        idx[0]                                                = 1;
         ((H5P_iter_data)iter_data).iterdata.get(0).iter_count = 1;
         try {
             H5.H5Piterate(plist_class_id, idx, iter_cb, iter_data);
@@ -620,21 +645,24 @@ public class TestH5Plist {
             err.printStackTrace();
             fail("H5.H5Piterate: " + err);
         }
-        assertFalse("H5Piterate ",((H5P_iter_data)iter_data).iterdata.isEmpty());
-        assertTrue("H5Piterate "+((H5P_iter_data)iter_data).iterdata.size(),((H5P_iter_data)iter_data).iterdata.size()==1);
-        assertTrue("H5Piterate "+(((H5P_iter_data)iter_data).iterdata.get(0)).iter_count,((idata)((H5P_iter_data)iter_data).iterdata.get(0)).iter_count==4);
+        assertFalse("H5Piterate ", ((H5P_iter_data)iter_data).iterdata.isEmpty());
+        assertTrue("H5Piterate " + ((H5P_iter_data)iter_data).iterdata.size(),
+                   ((H5P_iter_data)iter_data).iterdata.size() == 1);
+        assertTrue("H5Piterate " + (((H5P_iter_data)iter_data).iterdata.get(0)).iter_count,
+                   ((idata)((H5P_iter_data)iter_data).iterdata.get(0)).iter_count == 4);
 
-        assertTrue("H5Piterate: "+nprops+"="+idx[0], nprops == idx[0]);
+        assertTrue("H5Piterate: " + nprops + "=" + idx[0], nprops == idx[0]);
     }
 
     // Test basic generic property list code.
     //      Tests creating new generic property lists and adding and
     //      removing properties from them.
     @Test
-    public void testH5P_genprop_basic_list_prop() {
-        boolean     status = false;
-        long        lid1 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
-        long        nprops = -1;      // Number of properties in class
+    public void testH5P_genprop_basic_list_prop()
+    {
+        boolean status = false;
+        long lid1      = HDF5Constants.H5I_INVALID_HID; // Generic Property list ID
+        long nprops    = -1;                            // Number of properties in class
 
         try {
             // Add several properties (several w/default values)
@@ -647,7 +675,7 @@ public class TestH5Plist {
             }
             catch (Throwable err) {
                 err.printStackTrace();
-                fail("H5Pregister2 plist_class_id: "+PROP1_NAME + err);
+                fail("H5Pregister2 plist_class_id: " + PROP1_NAME + err);
             }
 
             // Insert second property into class (with no callbacks)
@@ -658,7 +686,7 @@ public class TestH5Plist {
             }
             catch (Throwable err) {
                 err.printStackTrace();
-                fail("H5Pregister2 plist_class_id: "+PROP2_NAME + err);
+                fail("H5Pregister2 plist_class_id: " + PROP2_NAME + err);
             }
 
             // Create a property list from the class
@@ -678,7 +706,7 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pget_nprops lid1: " + err);
             }
-            assertTrue("H5Pget_nprops: "+nprops, nprops==2);
+            assertTrue("H5Pget_nprops: " + nprops, nprops == 2);
 
             // Add temporary properties
 
@@ -690,7 +718,7 @@ public class TestH5Plist {
             }
             catch (Throwable err) {
                 err.printStackTrace();
-                fail("H5Pinsertr2 lid1: "+PROP3_NAME + err);
+                fail("H5Pinsertr2 lid1: " + PROP3_NAME + err);
             }
 
             // Insert second temporary property into list (with no callbacks)
@@ -701,7 +729,7 @@ public class TestH5Plist {
             }
             catch (Throwable err) {
                 err.printStackTrace();
-                fail("H5Pinsert2 lid1: "+PROP4_NAME + err);
+                fail("H5Pinsert2 lid1: " + PROP4_NAME + err);
             }
 
             // Check the number of properties in class
@@ -712,7 +740,7 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pget_nprops lid1: " + err);
             }
-            assertTrue("H5Pget_nprops: "+nprops, nprops==4);
+            assertTrue("H5Pget_nprops: " + nprops, nprops == 4);
 
             // Check existence of all properties
             try {
@@ -722,7 +750,7 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pexist plist_class_id: " + err);
             }
-            assertTrue("H5Pexist lid1 "+PROP1_NAME, status);
+            assertTrue("H5Pexist lid1 " + PROP1_NAME, status);
             try {
                 status = H5.H5Pexist(lid1, PROP2_NAME);
             }
@@ -730,7 +758,7 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pexist plist_class_id: " + err);
             }
-            assertTrue("H5Pexist lid1 "+PROP2_NAME, status);
+            assertTrue("H5Pexist lid1 " + PROP2_NAME, status);
             try {
                 status = H5.H5Pexist(lid1, PROP3_NAME);
             }
@@ -738,7 +766,7 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pexist plist_class_id: " + err);
             }
-            assertTrue("H5Pexist lid1 "+PROP3_NAME, status);
+            assertTrue("H5Pexist lid1 " + PROP3_NAME, status);
             try {
                 status = H5.H5Pexist(lid1, PROP4_NAME);
             }
@@ -746,265 +774,279 @@ public class TestH5Plist {
                 err.printStackTrace();
                 fail("H5Pexist plist_class_id: " + err);
             }
-            assertTrue("H5Pexist lid1 "+PROP4_NAME, status);
-
+            assertTrue("H5Pexist lid1 " + PROP4_NAME, status);
         }
         finally {
             if (lid1 > 0)
-                try {H5.H5Pclose(lid1);} catch (Throwable err) {}
+                try {
+                    H5.H5Pclose(lid1);
+                }
+                catch (Throwable err) {
+                }
         }
     }
 
-//    // Test basic generic property list code. Tests callbacks for property lists in a generic class.
-//    @Test
-//    public void testH5P_genprop_class_callback() {
-//        class cdata {
-//            public long cls_id = HDF5Constants.H5I_INVALID_HID;
-//            public int cls_count = -1;
-//            cdata(long id, int count) {
-//                this.cls_id = id;
-//                this.cls_count = count;
-//            }
-//        }
-//        class H5P_cls_create_data implements H5P_cls_create_func_t {
-//            public ArrayList clsdata = new ArrayList();
-//        }
-//        H5P_cls_create_func_t cls_create_data = new H5P_cls_create_data();
-//
-//        class H5P_cls_create_callback implements H5P_cls_create_func_cb {
-//            public int callback(long list_id, H5P_cls_create_func_t cls_data) {
-//                System.err.println("H5P_cls_create_callback enter");
-//                cdata cd = ((H5P_cls_create_data)cls_create_data).clsdata.get(0);
-//                cd.cls_count++;
-//                cd.cls_id = list_id;
-//                return 0;
-//            }
-//        }
-//        H5P_cls_create_func_cb cls_create_cb = new H5P_cls_create_callback();
-//
-//        class H5P_cls_copy_data implements H5P_cls_copy_func_t {
-//            public ArrayList clsdata = new ArrayList();
-//        }
-//        H5P_cls_copy_func_t cls_copy_data = new H5P_cls_copy_data();
-//
-//        class H5P_cls_copy_callback implements H5P_cls_copy_func_cb {
-//            public int callback(long list_id1, long list_id2, H5P_cls_copy_func_t cls_data) {
-//                cdata cd = ((H5P_cls_copy_data)cls_copy_data).clsdata.get(0);
-//                cd.cls_count++;
-//                cd.cls_id = list_id1;
-//                return 0;
-//            }
-//        }
-//        H5P_cls_copy_func_cb cls_copy_cb = new H5P_cls_copy_callback();
-//
-//        class H5P_cls_close_data implements H5P_cls_close_func_t {
-//            public ArrayList clsdata = new ArrayList();
-//        }
-//        H5P_cls_close_func_t cls_close_data = new H5P_cls_close_data();
-//
-//        class H5P_cls_close_callback implements H5P_cls_close_func_cb {
-//            public int callback(long list_id, H5P_cls_close_func_t cls_data) {
-//                cdata cd = ((H5P_cls_close_data)cls_close_data).clsdata.get(0);
-//                cd.cls_count++;
-//                cd.cls_id = list_id;
-//                return 0;
-//            }
-//        }
-//        H5P_cls_close_func_cb cls_close_cb = new H5P_cls_close_callback();
-//
-//        long    cid1 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
-//        long    cid2 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
-//        long    lid1 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
-//        long    lid2 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
-//        long    lid3 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
-//        long    nprops = -1;    // Number of properties in class
-//
-//        try {
-//            // Create a new generic class, derived from the root of the class hierarchy
-//            try {
-//                cid1 = H5.H5Pcreate_class(HDF5Constants.H5P_ROOT, CLASS1_NAME, cls_create_cb, cls_create_data, cls_copy_cb, cls_copy_data, cls_close_cb, cls_close_data);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pcreate_class cid1: " + err);
-//            }
-//            assertTrue("H5Pcreate_class cid1", cid1 >= 0);
-//
-//            // Insert first property into class (with no callbacks)
-//            try {
-//                byte[] prop_value = HDFNativeData.intToByte(prop1_def);
-//
-//                H5.H5Pregister2(cid1, PROP1_NAME, PROP1_SIZE, prop_value, null, null, null, null, null, null, null);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pregister2 cid1: "+PROP1_NAME + err);
-//            }
-//
-//            // Insert second property into class (with no callbacks)
-//            try {
-//                byte[] prop_value = HDFNativeData.floatToByte(prop2_def);
-//
-//                H5.H5Pregister2(cid1, PROP2_NAME, PROP2_SIZE, prop_value, null, null, null, null, null, null, null);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pregister2 cid1: "+PROP2_NAME + err);
-//            }
-//
-//            // Insert third property into class (with no callbacks)
-//            try {
-//                byte[] prop_value = new String(prop3_def).getBytes(StandardCharsets.UTF_8);
-//
-//                H5.H5Pregister2(cid1, PROP3_NAME, PROP3_SIZE, prop_value, null, null, null, null, null, null, null);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pregister2 cid1: "+PROP3_NAME + err);
-//            }
-//
-//            // Check the number of properties in class
-//            try {
-//                nprops = H5.H5Pget_nprops(cid1);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pget_nprops cid1: " + err);
-//            }
-//            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
-//
-//            // Initialize class callback structs
-//            cdata create_id = new cdata(-1, 0);
-//            cdata copy_id = new cdata(-1, 0);
-//            cdata close_id = new cdata(-1, 0);
-//            ((H5P_cls_create_data)cls_create_data).clsdata.add(create_id);
-//            ((H5P_cls_copy_data)cls_copy_data).clsdata.add(copy_id);
-//            ((H5P_cls_close_data)cls_close_data).clsdata.add(close_id);
-//
-//            // Create a property list from the class
-//            try {
-//                lid1 = H5.H5Pcreate(cid1);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pcreate lid1: " + err);
-//            }
-//
-//            // Verify that the creation callback occurred
-//            assertFalse("H5Pcreate ",((H5P_cls_create_data)cls_create_data).clsdata.isEmpty());
-//            assertTrue("H5Pcreate "+((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id ,((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id == lid1);
-//            assertTrue("H5Pcreate "+(((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count==1);
-//
-//            // Check the number of properties in list
-//            try {
-//                nprops = H5.H5Pget_nprops(lid1);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pget_nprops lid1: " + err);
-//            }
-//            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
-//
-//            // Create another property list from the class
-//            try {
-//                lid2 = H5.H5Pcreate(cid1);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pcreate lid2: " + err);
-//            }
-//
-//            /* Verify that the creation callback occurred */
-//            assertFalse("H5Pcreate ",((H5P_cls_create_data)cls_create_data).clsdata.isEmpty());
-//            assertTrue("H5Pcreate "+((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id ,((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id == lid2);
-//            assertTrue("H5Pcreate "+(((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count==2);
-//
-//            // Check the number of properties in list
-//            try {
-//                nprops = H5.H5Pget_nprops(lid2);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pget_nprops lid2: " + err);
-//            }
-//            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
-//
-//            // Create another property list by copying an existing list
-//            try {
-//                lid3= H5.H5Pcopy(lid1);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pcopy lid3: " + err);
-//            }
-//
-//            // Verify that the copy callback occurred
-//            assertFalse("H5Pcopy ",((H5P_cls_copy_data)cls_copy_data).clsdata.isEmpty());
-//            assertTrue("H5Pcopy "+((H5P_cls_copy_data)cls_copy_data).clsdata.get(0).cls_id ,((H5P_cls_copy_data)cls_copy_data).clsdata.get(0).cls_id == lid3);
-//            assertTrue("H5Pcopy "+(((H5P_cls_copy_data)cls_copy_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_copy_data)cls_copy_data).clsdata.get(0)).cls_count==1);
-//
-//            // Check the number of properties in list
-//            try {
-//                nprops = H5.H5Pget_nprops(lid3);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pget_nprops lid3: " + err);
-//            }
-//            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
-//
-//            // Close first list
-//            try {
-//                H5.H5Pclose(lid1);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pclose lid1: " + err);
-//            }
-//
-//            /* Verify that the close callback occurred */
-//            assertFalse("H5Pclose ",((H5P_cls_close_data)cls_close_data).clsdata.isEmpty());
-//            assertTrue("H5Pclose "+((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id ,((H5P_cls_close_data)cls_copy_data).clsdata.get(0).cls_id == lid1);
-//            assertTrue("H5Pclose "+(((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_close_data)cls_copy_data).clsdata.get(0)).cls_count==1);
-//
-//            // Close second list
-//            try {
-//                H5.H5Pclose(lid2);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pclose lid2: " + err);
-//            }
-//
-//            // Verify that the close callback occurred
-//            assertTrue("H5Pclose "+((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id ,((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id == lid2);
-//            assertTrue("H5Pclose "+(((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count==2);
-//
-//            // Close third list
-//            try {
-//                H5.H5Pclose(lid3);
-//            }
-//            catch (Throwable err) {
-//                err.printStackTrace();
-//                fail("H5Pclose lid3: " + err);
-//            }
-//
-//            // Verify that the close callback occurred
-//            assertTrue("H5Pclose "+((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id ,((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id == lid3);
-//            assertTrue("H5Pclose "+(((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count==3);
-//        }
-//        finally {
-//            if (lid3 > 0)
-//                try {H5.H5Pclose(lid3);} catch (Throwable err) {}
-//            if (lid2 > 0)
-//                try {H5.H5Pclose(lid2);} catch (Throwable err) {}
-//            if (lid1 > 0)
-//                try {H5.H5Pclose(lid1);} catch (Throwable err) {}
-//            if (cid2 > 0)
-//                try {H5.H5Pclose_class(cid2);} catch (Throwable err) {}
-//            if (cid1 > 0)
-//                try {H5.H5Pclose_class(cid1);} catch (Throwable err) {}
-//        }
-//    }
-
+    //    // Test basic generic property list code. Tests callbacks for property lists in a generic class.
+    //    @Test
+    //    public void testH5P_genprop_class_callback() {
+    //        class cdata {
+    //            public long cls_id = HDF5Constants.H5I_INVALID_HID;
+    //            public int cls_count = -1;
+    //            cdata(long id, int count) {
+    //                this.cls_id = id;
+    //                this.cls_count = count;
+    //            }
+    //        }
+    //        class H5P_cls_create_data implements H5P_cls_create_func_t {
+    //            public ArrayList clsdata = new ArrayList();
+    //        }
+    //        H5P_cls_create_func_t cls_create_data = new H5P_cls_create_data();
+    //
+    //        class H5P_cls_create_callback implements H5P_cls_create_func_cb {
+    //            public int callback(long list_id, H5P_cls_create_func_t cls_data) {
+    //                System.err.println("H5P_cls_create_callback enter");
+    //                cdata cd = ((H5P_cls_create_data)cls_create_data).clsdata.get(0);
+    //                cd.cls_count++;
+    //                cd.cls_id = list_id;
+    //                return 0;
+    //            }
+    //        }
+    //        H5P_cls_create_func_cb cls_create_cb = new H5P_cls_create_callback();
+    //
+    //        class H5P_cls_copy_data implements H5P_cls_copy_func_t {
+    //            public ArrayList clsdata = new ArrayList();
+    //        }
+    //        H5P_cls_copy_func_t cls_copy_data = new H5P_cls_copy_data();
+    //
+    //        class H5P_cls_copy_callback implements H5P_cls_copy_func_cb {
+    //            public int callback(long list_id1, long list_id2, H5P_cls_copy_func_t cls_data) {
+    //                cdata cd = ((H5P_cls_copy_data)cls_copy_data).clsdata.get(0);
+    //                cd.cls_count++;
+    //                cd.cls_id = list_id1;
+    //                return 0;
+    //            }
+    //        }
+    //        H5P_cls_copy_func_cb cls_copy_cb = new H5P_cls_copy_callback();
+    //
+    //        class H5P_cls_close_data implements H5P_cls_close_func_t {
+    //            public ArrayList clsdata = new ArrayList();
+    //        }
+    //        H5P_cls_close_func_t cls_close_data = new H5P_cls_close_data();
+    //
+    //        class H5P_cls_close_callback implements H5P_cls_close_func_cb {
+    //            public int callback(long list_id, H5P_cls_close_func_t cls_data) {
+    //                cdata cd = ((H5P_cls_close_data)cls_close_data).clsdata.get(0);
+    //                cd.cls_count++;
+    //                cd.cls_id = list_id;
+    //                return 0;
+    //            }
+    //        }
+    //        H5P_cls_close_func_cb cls_close_cb = new H5P_cls_close_callback();
+    //
+    //        long    cid1 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
+    //        long    cid2 = HDF5Constants.H5I_INVALID_HID;        // Generic Property class ID
+    //        long    lid1 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
+    //        long    lid2 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
+    //        long    lid3 = HDF5Constants.H5I_INVALID_HID;        // Generic Property list ID
+    //        long    nprops = -1;    // Number of properties in class
+    //
+    //        try {
+    //            // Create a new generic class, derived from the root of the class hierarchy
+    //            try {
+    //                cid1 = H5.H5Pcreate_class(HDF5Constants.H5P_ROOT, CLASS1_NAME, cls_create_cb,
+    //                cls_create_data, cls_copy_cb, cls_copy_data, cls_close_cb, cls_close_data);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pcreate_class cid1: " + err);
+    //            }
+    //            assertTrue("H5Pcreate_class cid1", cid1 >= 0);
+    //
+    //            // Insert first property into class (with no callbacks)
+    //            try {
+    //                byte[] prop_value = HDFNativeData.intToByte(prop1_def);
+    //
+    //                H5.H5Pregister2(cid1, PROP1_NAME, PROP1_SIZE, prop_value, null, null, null, null, null,
+    //                null, null);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pregister2 cid1: "+PROP1_NAME + err);
+    //            }
+    //
+    //            // Insert second property into class (with no callbacks)
+    //            try {
+    //                byte[] prop_value = HDFNativeData.floatToByte(prop2_def);
+    //
+    //                H5.H5Pregister2(cid1, PROP2_NAME, PROP2_SIZE, prop_value, null, null, null, null, null,
+    //                null, null);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pregister2 cid1: "+PROP2_NAME + err);
+    //            }
+    //
+    //            // Insert third property into class (with no callbacks)
+    //            try {
+    //                byte[] prop_value = new String(prop3_def).getBytes(StandardCharsets.UTF_8);
+    //
+    //                H5.H5Pregister2(cid1, PROP3_NAME, PROP3_SIZE, prop_value, null, null, null, null, null,
+    //                null, null);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pregister2 cid1: "+PROP3_NAME + err);
+    //            }
+    //
+    //            // Check the number of properties in class
+    //            try {
+    //                nprops = H5.H5Pget_nprops(cid1);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pget_nprops cid1: " + err);
+    //            }
+    //            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
+    //
+    //            // Initialize class callback structs
+    //            cdata create_id = new cdata(-1, 0);
+    //            cdata copy_id = new cdata(-1, 0);
+    //            cdata close_id = new cdata(-1, 0);
+    //            ((H5P_cls_create_data)cls_create_data).clsdata.add(create_id);
+    //            ((H5P_cls_copy_data)cls_copy_data).clsdata.add(copy_id);
+    //            ((H5P_cls_close_data)cls_close_data).clsdata.add(close_id);
+    //
+    //            // Create a property list from the class
+    //            try {
+    //                lid1 = H5.H5Pcreate(cid1);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pcreate lid1: " + err);
+    //            }
+    //
+    //            // Verify that the creation callback occurred
+    //            assertFalse("H5Pcreate ",((H5P_cls_create_data)cls_create_data).clsdata.isEmpty());
+    //            assertTrue("H5Pcreate "+((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id
+    //            ,((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id == lid1);
+    //            assertTrue("H5Pcreate
+    //            "+(((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count==1);
+    //
+    //            // Check the number of properties in list
+    //            try {
+    //                nprops = H5.H5Pget_nprops(lid1);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pget_nprops lid1: " + err);
+    //            }
+    //            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
+    //
+    //            // Create another property list from the class
+    //            try {
+    //                lid2 = H5.H5Pcreate(cid1);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pcreate lid2: " + err);
+    //            }
+    //
+    //            /* Verify that the creation callback occurred */
+    //            assertFalse("H5Pcreate ",((H5P_cls_create_data)cls_create_data).clsdata.isEmpty());
+    //            assertTrue("H5Pcreate "+((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id
+    //            ,((H5P_cls_create_data)cls_create_data).clsdata.get(0).cls_id == lid2);
+    //            assertTrue("H5Pcreate
+    //            "+(((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_create_data)cls_create_data).clsdata.get(0)).cls_count==2);
+    //
+    //            // Check the number of properties in list
+    //            try {
+    //                nprops = H5.H5Pget_nprops(lid2);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pget_nprops lid2: " + err);
+    //            }
+    //            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
+    //
+    //            // Create another property list by copying an existing list
+    //            try {
+    //                lid3= H5.H5Pcopy(lid1);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pcopy lid3: " + err);
+    //            }
+    //
+    //            // Verify that the copy callback occurred
+    //            assertFalse("H5Pcopy ",((H5P_cls_copy_data)cls_copy_data).clsdata.isEmpty());
+    //            assertTrue("H5Pcopy "+((H5P_cls_copy_data)cls_copy_data).clsdata.get(0).cls_id
+    //            ,((H5P_cls_copy_data)cls_copy_data).clsdata.get(0).cls_id == lid3); assertTrue("H5Pcopy
+    //            "+(((H5P_cls_copy_data)cls_copy_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_copy_data)cls_copy_data).clsdata.get(0)).cls_count==1);
+    //
+    //            // Check the number of properties in list
+    //            try {
+    //                nprops = H5.H5Pget_nprops(lid3);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pget_nprops lid3: " + err);
+    //            }
+    //            assertTrue("H5Pget_nprops: "+nprops, nprops==3);
+    //
+    //            // Close first list
+    //            try {
+    //                H5.H5Pclose(lid1);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pclose lid1: " + err);
+    //            }
+    //
+    //            /* Verify that the close callback occurred */
+    //            assertFalse("H5Pclose ",((H5P_cls_close_data)cls_close_data).clsdata.isEmpty());
+    //            assertTrue("H5Pclose "+((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id
+    //            ,((H5P_cls_close_data)cls_copy_data).clsdata.get(0).cls_id == lid1); assertTrue("H5Pclose
+    //            "+(((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_close_data)cls_copy_data).clsdata.get(0)).cls_count==1);
+    //
+    //            // Close second list
+    //            try {
+    //                H5.H5Pclose(lid2);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pclose lid2: " + err);
+    //            }
+    //
+    //            // Verify that the close callback occurred
+    //            assertTrue("H5Pclose "+((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id
+    //            ,((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id == lid2); assertTrue("H5Pclose
+    //            "+(((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count==2);
+    //
+    //            // Close third list
+    //            try {
+    //                H5.H5Pclose(lid3);
+    //            }
+    //            catch (Throwable err) {
+    //                err.printStackTrace();
+    //                fail("H5Pclose lid3: " + err);
+    //            }
+    //
+    //            // Verify that the close callback occurred
+    //            assertTrue("H5Pclose "+((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id
+    //            ,((H5P_cls_close_data)cls_close_data).clsdata.get(0).cls_id == lid3); assertTrue("H5Pclose
+    //            "+(((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count,((cdata)((H5P_cls_close_data)cls_close_data).clsdata.get(0)).cls_count==3);
+    //        }
+    //        finally {
+    //            if (lid3 > 0)
+    //                try {H5.H5Pclose(lid3);} catch (Throwable err) {}
+    //            if (lid2 > 0)
+    //                try {H5.H5Pclose(lid2);} catch (Throwable err) {}
+    //            if (lid1 > 0)
+    //                try {H5.H5Pclose(lid1);} catch (Throwable err) {}
+    //            if (cid2 > 0)
+    //                try {H5.H5Pclose_class(cid2);} catch (Throwable err) {}
+    //            if (cid1 > 0)
+    //                try {H5.H5Pclose_class(cid1);} catch (Throwable err) {}
+    //        }
+    //    }
 }
diff --git a/java/test/TestH5Pvirtual.java b/java/test/TestH5Pvirtual.java
index 0478356..41ae6d1 100644
--- a/java/test/TestH5Pvirtual.java
+++ b/java/test/TestH5Pvirtual.java
@@ -32,48 +32,47 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Pvirtual {
-    @Rule public TestName testname = new TestName();
-
-    private static final String H5_FILE = "vds.h5";
-    private static final String SRC_FILE[] = {
-            "v-0.h5",
-            "v-1.h5",
-            "v-2.h5"
-        };
-    private static final String SRC_DATASET[] = {
-            "A",
-            "B",
-            "C"
-        };
-    private static final int DIM_Y = 6;
-    private static final int VDSDIM_X = 4;
-    private static final int VDSDIM_Y = 6;
-    private static final int fill_value = -1;
-    long[] H5dims = { DIM_Y };
-    long[] VDSH5dims = { VDSDIM_X, VDSDIM_Y };
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5dssid = HDF5Constants.H5I_INVALID_HID;
-    long H5dvsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long H5dcplid = HDF5Constants.H5I_INVALID_HID;
-    long H5dapl_id = HDF5Constants.H5I_INVALID_HID;
-
-    private final void _deleteFile(String filename) {
+    @Rule
+    public TestName testname = new TestName();
+
+    private static final String H5_FILE       = "vds.h5";
+    private static final String SRC_FILE[]    = {"v-0.h5", "v-1.h5", "v-2.h5"};
+    private static final String SRC_DATASET[] = {"A", "B", "C"};
+    private static final int DIM_Y            = 6;
+    private static final int VDSDIM_X         = 4;
+    private static final int VDSDIM_Y         = 6;
+    private static final int fill_value       = -1;
+    long[] H5dims                             = {DIM_Y};
+    long[] VDSH5dims                          = {VDSDIM_X, VDSDIM_Y};
+    long H5fid                                = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                               = HDF5Constants.H5I_INVALID_HID;
+    long H5dssid                              = HDF5Constants.H5I_INVALID_HID;
+    long H5dvsid                              = HDF5Constants.H5I_INVALID_HID;
+    long H5did                                = HDF5Constants.H5I_INVALID_HID;
+    long H5dcplid                             = HDF5Constants.H5I_INVALID_HID;
+    long H5dapl_id                            = HDF5Constants.H5I_INVALID_HID;
+
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dcpl, long dapl) {
-        long did = HDF5Constants.H5I_INVALID_HID;
+    private final long _createDataset(long fid, long dsid, String name, long dcpl, long dapl)
+    {
+        long did      = HDF5Constants.H5I_INVALID_HID;
         long space_id = HDF5Constants.H5I_INVALID_HID;
-        long[] start = {0, 0};
+        long[] start  = {0, 0};
         long[] stride = null;
-        long[] count = {1, 1};
-        long[] block = {1, VDSDIM_Y};
+        long[] count  = {1, 1};
+        long[] block  = {1, VDSDIM_Y};
 
         try {
             H5dssid = H5.H5Screate_simple(1, H5dims, null);
@@ -83,8 +82,8 @@ public class TestH5Pvirtual {
                 H5.H5Sselect_hyperslab(dsid, HDF5Constants.H5S_SELECT_SET, start, stride, count, block);
                 H5.H5Pset_virtual(dcpl, dsid, SRC_FILE[i], SRC_DATASET[i], H5dssid);
             }
-            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_NATIVE_INT, dsid,
-                    HDF5Constants.H5P_DEFAULT, dcpl, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_NATIVE_INT, dsid, HDF5Constants.H5P_DEFAULT, dcpl,
+                               dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -95,23 +94,26 @@ public class TestH5Pvirtual {
         return did;
     }
 
-    private final void _createH5File(long fcpl, long fapl) {
+    private final void _createH5File(long fcpl, long fapl)
+    {
         int[] dset_data = new int[DIM_Y];
         // Create source files and datasets
-        for (int i=0; i < 3; i++) {
+        for (int i = 0; i < 3; i++) {
             long space_id = HDF5Constants.H5I_INVALID_HID;
-            long dset_id = HDF5Constants.H5I_INVALID_HID;
-            long file_id = HDF5Constants.H5I_INVALID_HID;
-            for (int j = 0; j < DIM_Y; j++) dset_data[j] = i+1;
+            long dset_id  = HDF5Constants.H5I_INVALID_HID;
+            long file_id  = HDF5Constants.H5I_INVALID_HID;
+            for (int j = 0; j < DIM_Y; j++)
+                dset_data[j] = i + 1;
 
             try {
-                file_id = H5.H5Fcreate(SRC_FILE[i], HDF5Constants.H5F_ACC_TRUNC,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                file_id  = H5.H5Fcreate(SRC_FILE[i], HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                       HDF5Constants.H5P_DEFAULT);
                 space_id = H5.H5Screate_simple(1, H5dims, null);
-                dset_id = H5.H5Dcreate(file_id, SRC_DATASET[i], HDF5Constants.H5T_NATIVE_INT, space_id,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-                H5.H5Dwrite (dset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT,
-                        dset_data);
+                dset_id  = H5.H5Dcreate(file_id, SRC_DATASET[i], HDF5Constants.H5T_NATIVE_INT, space_id,
+                                       HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                                       HDF5Constants.H5P_DEFAULT);
+                H5.H5Dwrite(dset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
+                            HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
             }
             catch (Throwable err) {
                 err.printStackTrace();
@@ -119,19 +121,32 @@ public class TestH5Pvirtual {
             }
             finally {
                 if (dset_id > 0)
-                    try {H5.H5Dclose(dset_id);} catch (Exception ex) {}
+                    try {
+                        H5.H5Dclose(dset_id);
+                    }
+                    catch (Exception ex) {
+                    }
                 if (space_id > 0)
-                    try {H5.H5Sclose(space_id);} catch (Exception ex) {}
+                    try {
+                        H5.H5Sclose(space_id);
+                    }
+                    catch (Exception ex) {
+                    }
                 if (file_id > 0)
-                    try {H5.H5Fclose(file_id);} catch (Exception ex) {}
+                    try {
+                        H5.H5Fclose(file_id);
+                    }
+                    catch (Exception ex) {
+                    }
             }
         }
 
         try {
             int[] fill_value = {-1};
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-            H5dsid = H5.H5Screate_simple(2, VDSH5dims, null);
-            H5dcplid = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE);
+            H5fid            = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
+            H5dsid           = H5.H5Screate_simple(2, VDSH5dims, null);
+            H5dcplid         = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE);
             H5.H5Pset_fill_value(H5dcplid, HDF5Constants.H5T_NATIVE_INT, fill_value);
         }
         catch (Throwable err) {
@@ -151,25 +166,42 @@ public class TestH5Pvirtual {
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
         _createH5File(HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
         H5dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
         assertTrue("TestH5Pvirtual.createH5file: H5.H5Pcreate: ", H5dapl_id > 0);
-  }
+    }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5dapl_id > 0)
-            try {H5.H5Pclose(H5dapl_id);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5dapl_id);
+            }
+            catch (Exception ex) {
+            }
         if (H5dcplid > 0)
-            try {H5.H5Pclose(H5dcplid);} catch (Exception ex) {}
+            try {
+                H5.H5Pclose(H5dcplid);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         for (int i = 0; i < 3; i++) {
             _deleteFile(SRC_FILE[i]);
         }
@@ -178,12 +210,13 @@ public class TestH5Pvirtual {
     }
 
     @Test
-    public void testH5Pvirtual_storage() {
+    public void testH5Pvirtual_storage()
+    {
         int layout = -1;
 
         H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
         try {
-            layout = H5.H5Pget_layout (H5dcplid);
+            layout = H5.H5Pget_layout(H5dcplid);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -191,15 +224,24 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
         assertTrue("testH5Pvirtual_storage", HDF5Constants.H5D_VIRTUAL == layout);
     }
 
     @Test
-    public void testH5Pget_virtual_count() {
+    public void testH5Pget_virtual_count()
+    {
         long num_map = -1;
 
         H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
@@ -212,21 +254,30 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
-        assertTrue("testH5Pget_virtual_count: "+num_map, num_map >= 0);
+        assertTrue("testH5Pget_virtual_count: " + num_map, num_map >= 0);
         assertEquals(3, num_map);
     }
 
     @Test
-    public void testH5Pget_source_filename() throws Throwable {
+    public void testH5Pget_source_filename() throws Throwable
+    {
         String filename = null;
 
         H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
         try {
-            filename = (H5.H5Pget_virtual_filename (H5dcplid, 2));
+            filename = (H5.H5Pget_virtual_filename(H5dcplid, 2));
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -234,20 +285,29 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
-        assertTrue("testH5Pget_source_filename: "+filename, filename.compareTo("v-2.h5") == 0);
+        assertTrue("testH5Pget_source_filename: " + filename, filename.compareTo("v-2.h5") == 0);
     }
 
     @Test
-    public void testH5Pget_source_datasetname() throws Throwable {
+    public void testH5Pget_source_datasetname() throws Throwable
+    {
         String datasetname = null;
 
         H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
         try {
-            datasetname = H5.H5Pget_virtual_dsetname (H5dcplid, 1);
+            datasetname = H5.H5Pget_virtual_dsetname(H5dcplid, 1);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -255,21 +315,30 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
-        assertTrue("testH5Pget_source_datasetname: "+datasetname, datasetname.compareTo("B") == 0);
+        assertTrue("testH5Pget_source_datasetname: " + datasetname, datasetname.compareTo("B") == 0);
     }
 
     @Test
-    public void testH5Pget_selection_source_dataset() throws Throwable {
-        long src_space = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Pget_selection_source_dataset() throws Throwable
+    {
+        long src_space     = HDF5Constants.H5I_INVALID_HID;
         long src_selection = -1;
 
         H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
         try {
-            src_space = H5.H5Pget_virtual_srcspace (H5dcplid, 0);
+            src_space     = H5.H5Pget_virtual_srcspace(H5dcplid, 0);
             src_selection = H5.H5Sget_select_type(src_space);
         }
         catch (Throwable err) {
@@ -278,17 +347,30 @@ public class TestH5Pvirtual {
         }
         finally {
             if (src_space > 0)
-                try {H5.H5Sclose(src_space);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(src_space);
+                }
+                catch (Exception ex) {
+                }
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
         assertTrue("testH5Pget_selection_source_dataset", src_selection == HDF5Constants.H5S_SEL_ALL);
     }
 
     @Test
-    public void testH5Pget_mapping_parameters() {
+    public void testH5Pget_mapping_parameters()
+    {
         long num_map = -1;
 
         H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
@@ -302,22 +384,22 @@ public class TestH5Pvirtual {
             }
             for (int i = 0; i < num_map; i++) {
                 int vselection = -1;
-                long vspace = -1;
-                long nblocks;   // Number of hyperslab blocks
-                long blocks[] = {-1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1};    // List of blocks
-                long[] start = {i, 0};
-                long[] stride = {1, 1};
-                long[] count = {1, 1};
-                long[] block = {1, VDSDIM_Y};
-                long q_start[] = new long[2];
-                long q_stride[] = new long[2];
-                long q_count[] = new long[2];
-                long q_block[] = new long[2];
+                long vspace    = -1;
+                long nblocks; // Number of hyperslab blocks
+                long blocks[]      = {-1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1}; // List of blocks
+                long[] start       = {i, 0};
+                long[] stride      = {1, 1};
+                long[] count       = {1, 1};
+                long[] block       = {1, VDSDIM_Y};
+                long q_start[]     = new long[2];
+                long q_stride[]    = new long[2];
+                long q_count[]     = new long[2];
+                long q_block[]     = new long[2];
                 boolean is_regular = false;
 
                 try {
                     try {
-                        vspace = H5.H5Pget_virtual_vspace (H5dcplid, i);
+                        vspace = H5.H5Pget_virtual_vspace(H5dcplid, i);
                     }
                     catch (Throwable err) {
                         err.printStackTrace();
@@ -330,7 +412,8 @@ public class TestH5Pvirtual {
                         err.printStackTrace();
                         fail("H5.H5Sget_select_type: " + err);
                     }
-                    assertTrue("testH5Pget_mapping_parameters["+i+"]", vselection == HDF5Constants.H5S_SEL_HYPERSLABS);
+                    assertTrue("testH5Pget_mapping_parameters[" + i + "]",
+                               vselection == HDF5Constants.H5S_SEL_HYPERSLABS);
 
                     // Verify that there is only one block
                     nblocks = H5.H5Sget_select_hyper_nblocks(vspace);
@@ -340,30 +423,38 @@ public class TestH5Pvirtual {
                     H5.H5Sget_select_hyper_blocklist(vspace, 0, nblocks, blocks);
 
                     // Verify that the correct block is defined
-                    assertTrue("H5.H5Sget_select_hyper_blocklist["+i+"] [0]: "+blocks[0], start[0] == blocks[0]);
-                    assertTrue("H5.H5Sget_select_hyper_blocklist["+i+"] [1]: "+blocks[1], start[1] == blocks[1]);
-                    assertTrue("H5.H5Sget_select_hyper_blocklist["+i+"] [2]: "+blocks[2], (block[0]-1+i) == blocks[2]);
-                    assertTrue("H5.H5Sget_select_hyper_blocklist["+i+"] [3]: "+blocks[3], (block[1]-1) == blocks[3]);
+                    assertTrue("H5.H5Sget_select_hyper_blocklist[" + i + "] [0]: " + blocks[0],
+                               start[0] == blocks[0]);
+                    assertTrue("H5.H5Sget_select_hyper_blocklist[" + i + "] [1]: " + blocks[1],
+                               start[1] == blocks[1]);
+                    assertTrue("H5.H5Sget_select_hyper_blocklist[" + i + "] [2]: " + blocks[2],
+                               (block[0] - 1 + i) == blocks[2]);
+                    assertTrue("H5.H5Sget_select_hyper_blocklist[" + i + "] [3]: " + blocks[3],
+                               (block[1] - 1) == blocks[3]);
                     // We also can use new APIs to get start, stride, count and block
                     is_regular = H5.H5Sis_regular_hyperslab(vspace);
                     assertTrue("H5.H5Sis_regular_hyperslab", is_regular);
-                    H5.H5Sget_regular_hyperslab (vspace, q_start, q_stride, q_count, q_block);
+                    H5.H5Sget_regular_hyperslab(vspace, q_start, q_stride, q_count, q_block);
 
                     // Verify the hyperslab parameters
-                    for(int u = 0; u < 2; u++) {
+                    for (int u = 0; u < 2; u++) {
                         assertTrue("H5Sget_regular_hyperslab, start", start[u] == q_start[u]);
                         assertTrue("H5Sget_regular_hyperslab, stride", stride[u] == q_stride[u]);
                         assertTrue("H5Sget_regular_hyperslab, count", count[u] == q_count[u]);
                         assertTrue("H5Sget_regular_hyperslab, block", block[u] == q_block[u]);
                     }
-               }
+                }
                 catch (Throwable err) {
                     err.printStackTrace();
                     fail("H5.testH5Pget_mapping_parameters: " + err);
                 }
                 finally {
                     if (vspace > 0)
-                        try {H5.H5Sclose(vspace);} catch (Exception ex) {}
+                        try {
+                            H5.H5Sclose(vspace);
+                        }
+                        catch (Exception ex) {
+                        }
                 }
             }
         }
@@ -373,16 +464,25 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Pset_get_virtual_view() {
+    public void testH5Pset_get_virtual_view()
+    {
         int ret_val = -1;
-        H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
+        H5did       = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
         try {
             ret_val = H5.H5Pget_virtual_view(H5dapl_id);
             assertTrue("H5Pget_virtual_view", ret_val >= 0);
@@ -398,16 +498,25 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void  testH5Pset_get_virtual_printf_gap() {
+    public void testH5Pset_get_virtual_printf_gap()
+    {
         long ret_val = -1;
-        H5did = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
+        H5did        = _createDataset(H5fid, H5dsid, "VDS", H5dcplid, H5dapl_id);
         try {
             ret_val = H5.H5Pget_virtual_printf_gap(H5dapl_id);
             assertTrue("H5Pget_virtual_printf_gap", ret_val >= 0);
@@ -423,14 +532,23 @@ public class TestH5Pvirtual {
         }
         finally {
             if (H5dssid > 0)
-                try {H5.H5Sclose(H5dssid);} catch (Exception ex) {}
+                try {
+                    H5.H5Sclose(H5dssid);
+                }
+                catch (Exception ex) {
+                }
             if (H5did > 0)
-                try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+                try {
+                    H5.H5Dclose(H5did);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Pset_virtual_prefix() {
+    public void testH5Pset_virtual_prefix()
+    {
         String prefix = "tmp";
         try {
             H5.H5Pset_virtual_prefix(H5dapl_id, prefix);
@@ -442,14 +560,16 @@ public class TestH5Pvirtual {
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Pset_virtual_prefix_null() throws Throwable{
+    public void testH5Pset_virtual_prefix_null() throws Throwable
+    {
         H5.H5Pset_virtual_prefix(H5dapl_id, null);
     }
 
     @Test
-    public void testH5Pget_virtual_prefix() {
+    public void testH5Pget_virtual_prefix()
+    {
         String prefix = "tmp";
-        String pre = "";
+        String pre    = "";
 
         try {
             H5.H5Pset_virtual_prefix(H5dapl_id, prefix);
diff --git a/java/test/TestH5R.java b/java/test/TestH5R.java
index 031b8e4..4e610bc 100644
--- a/java/test/TestH5R.java
+++ b/java/test/TestH5R.java
@@ -23,8 +23,8 @@ import java.io.File;
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5Exception;
-import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.exceptions.HDF5FunctionArgumentException;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
 import org.junit.After;
 import org.junit.Before;
@@ -34,38 +34,46 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5R {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testH5R.h5";
-    private static final int DIM_X = 4;
-    private static final int DIM_Y = 6;
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
-    long H5gid = HDF5Constants.H5I_INVALID_HID;
-    long H5did2 = HDF5Constants.H5I_INVALID_HID;
-    long[] H5dims = { DIM_X, DIM_Y };
-    int[][] dset_data = new int[DIM_X][DIM_Y];
-    int FILLVAL = 99;
-
-    private final void _deleteFile(String filename) {
+    private static final int DIM_X      = 4;
+    private static final int DIM_Y      = 6;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                         = HDF5Constants.H5I_INVALID_HID;
+    long H5did                          = HDF5Constants.H5I_INVALID_HID;
+    long H5gid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5did2                         = HDF5Constants.H5I_INVALID_HID;
+    long[] H5dims                       = {DIM_X, DIM_Y};
+    int[][] dset_data                   = new int[DIM_X][DIM_Y];
+    int FILLVAL                         = 99;
+
+    private final void _deleteFile(String filename)
+    {
         File file = null;
         try {
             file = new File(filename);
         }
-        catch (Throwable err) {}
+        catch (Throwable err) {
+        }
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {e.printStackTrace();}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+                e.printStackTrace();
+            }
         }
         assertFalse("TestH5R._deleteFile file still exists ", file.exists());
     }
 
-    private final long _createDataset(long fid, long dsid, String name, long dapl) {
+    private final long _createDataset(long fid, long dsid, String name, long dapl)
+    {
         long did = HDF5Constants.H5I_INVALID_HID;
         try {
-            did = H5.H5Dcreate(fid, name,
-                        HDF5Constants.H5T_STD_I32BE, dsid,
-                        HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+            did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT, dapl);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -76,34 +84,35 @@ public class TestH5R {
         return did;
     }
 
-    private final long _createGroup(long fid, String name) {
+    private final long _createGroup(long fid, String name)
+    {
         long gid = HDF5Constants.H5I_INVALID_HID;
         try {
-            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                               HDF5Constants.H5P_DEFAULT);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Gcreate: " + err);
         }
-        assertTrue("TestH5R._createGroup: ",gid > 0);
+        assertTrue("TestH5R._createGroup: ", gid > 0);
 
         return gid;
     }
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         try {
-            H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                    HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5fid  = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                 HDF5Constants.H5P_DEFAULT);
             H5dsid = H5.H5Screate_simple(2, H5dims, null);
-            H5gid = _createGroup(H5fid, "Group1");
+            H5gid  = _createGroup(H5fid, "Group1");
             H5did2 = _createDataset(H5gid, H5dsid, "dset2", HDF5Constants.H5P_DEFAULT);
-            H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+            H5did  = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
 
             // Initialize the dataset.
             for (int indx = 0; indx < DIM_X; indx++)
@@ -112,38 +121,57 @@ public class TestH5R {
 
             try {
                 if (H5did >= 0)
-                    H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
-                            HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                            HDF5Constants.H5P_DEFAULT, dset_data[0]);
+                    H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
+                                HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data[0]);
             }
             catch (Exception e) {
                 e.printStackTrace();
             }
-
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("TestH5R.createH5file: " + err);
         }
-        assertTrue("TestH5R.createH5file: H5.H5Fcreate: ",H5fid > 0);
-        assertTrue("TestH5R.createH5file: H5.H5Screate_simple: ",H5dsid > 0);
-        assertTrue("TestH5R.createH5file: _createDataset: ",H5did > 0);
+        assertTrue("TestH5R.createH5file: H5.H5Fcreate: ", H5fid > 0);
+        assertTrue("TestH5R.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
+        assertTrue("TestH5R.createH5file: _createDataset: ", H5did > 0);
 
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did > 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
         if (H5gid > 0)
-            try {H5.H5Gclose(H5gid);} catch (Exception ex) {}
+            try {
+                H5.H5Gclose(H5gid);
+            }
+            catch (Exception ex) {
+            }
         if (H5did2 > 0)
-            try {H5.H5Dclose(H5did2);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did2);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
         System.out.println();
@@ -152,11 +180,12 @@ public class TestH5R {
     // Test v1.12 APIs params
 
     @Test
-    public void testH5Rget_object() {
-        int ref_type = HDF5Constants.H5R_OBJECT2;
-        long ret_val = -1;
-        byte[] ref = null;
-        String name = "";
+    public void testH5Rget_object()
+    {
+        int ref_type   = HDF5Constants.H5R_OBJECT2;
+        long ret_val   = -1;
+        byte[] ref     = null;
+        String name    = "";
         String objName = "/dset";
 
         try {
@@ -197,9 +226,10 @@ public class TestH5R {
     }
 
     @Test
-    public void testH5Rget_obj_type3() {
-        int obj_type = -1;
-        byte[] ref = null;
+    public void testH5Rget_obj_type3()
+    {
+        int obj_type   = -1;
+        byte[] ref     = null;
         String objName = "/dset";
 
         try {
@@ -222,13 +252,14 @@ public class TestH5R {
     }
 
     @Test
-    public void testH5Rcreate_regionref_object() {
-        byte[] ref = null;
+    public void testH5Rcreate_regionref_object()
+    {
+        byte[] ref     = null;
         String objName = "/dset";
-        long start[] = {2,2};     // Starting location of hyperslab
-        long stride[] = {1,1};    // Stride of hyperslab
-        long count[] = {1,1};     // Element count of hyperslab
-        long block[] = {3,3};     // Block size of hyperslab
+        long start[]   = {2, 2}; // Starting location of hyperslab
+        long stride[]  = {1, 1}; // Stride of hyperslab
+        long count[]   = {1, 1}; // Element count of hyperslab
+        long block[]   = {3, 3}; // Block size of hyperslab
 
         // Select 3x3 hyperslab for reference
         try {
@@ -249,235 +280,252 @@ public class TestH5R {
         H5.H5Rdestroy(ref);
     }
 
-// These tests need to be updated with new APIs
-//    @Test//
-//    public void testH5Rget_group() {
-//        long loc_id = H5fid;
-//        int ref_type = HDF5Constants.H5R_OBJECT2;
-//        long ret_val = -1;
-//        byte[] ref = null;
-//        String name = "";
-//        String objName = "/dset";
-//
-//        try {
-//            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("testH5Rget_object: H5Rcreate_object " + err);
-//        }
-//        try {
-//            dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
-//
-//            //Create reference on group
-//            ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
-//            group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
-//            assertNotNull(ref1);
-//            assertNotNull(ref2);
-//            assertTrue(dataset_id >= 0);
-//            assertTrue(group_id >= 0);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("TestH5Rdereference " + err);
-//        }
-//        finally {
-//            try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
-//            try {H5.H5Gclose(group_id);} catch (Exception ex) {}
-//        }
-//    }
-
-//    @Test//
-//    public void testH5Rget_region_dataset() {
-//        long loc_id = H5fid;
-//        int ref_type = HDF5Constants.H5R_OBJECT2;
-//        long ret_val = -1;
-//        byte[] ref = null;
-//        String name = "";
-//        String objName = "/dset";
-//
-//        try {
-//            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("testH5Rget_object: H5Rcreate_object " + err);
-//        }
-//        try {
-//            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
-//            assertNotNull(ref);
-//            assertTrue(dsid >= 0);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("TestH5Rget_region: " + err);
-//        }
-//        finally {
-//            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
-//        }
-//    }
-
-//    @Test//
-//    public void testH5Rget_attr() {
-//        long loc_id = H5fid;
-//        int ref_type = HDF5Constants.H5R_OBJECT2;
-//        long ret_val = -1;
-//        byte[] ref = null;
-//        String name = "";
-//        String objName = "/dset";
-//
-//        try {
-//            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("testH5Rget_object: H5Rcreate_object " + err);
-//        }
-//        try {
-//            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
-//            assertNotNull(ref);
-//            assertTrue(dsid >= 0);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("TestH5Rget_region: " + err);
-//        }
-//        finally {
-//            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
-//        }
-//    }
+    // These tests need to be updated with new APIs
+    //    @Test//
+    //    public void testH5Rget_group() {
+    //        long loc_id = H5fid;
+    //        int ref_type = HDF5Constants.H5R_OBJECT2;
+    //        long ret_val = -1;
+    //        byte[] ref = null;
+    //        String name = "";
+    //        String objName = "/dset";
+    //
+    //        try {
+    //            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("testH5Rget_object: H5Rcreate_object " + err);
+    //        }
+    //        try {
+    //            dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT,
+    //            HDF5Constants.H5R_DATASET_REGION, ref1);
+    //
+    //            //Create reference on group
+    //            ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
+    //            group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT,
+    //            ref2); assertNotNull(ref1); assertNotNull(ref2); assertTrue(dataset_id >= 0);
+    //            assertTrue(group_id >= 0);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("TestH5Rdereference " + err);
+    //        }
+    //        finally {
+    //            try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
+    //            try {H5.H5Gclose(group_id);} catch (Exception ex) {}
+    //        }
+    //    }
+
+    //    @Test//
+    //    public void testH5Rget_region_dataset() {
+    //        long loc_id = H5fid;
+    //        int ref_type = HDF5Constants.H5R_OBJECT2;
+    //        long ret_val = -1;
+    //        byte[] ref = null;
+    //        String name = "";
+    //        String objName = "/dset";
+    //
+    //        try {
+    //            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("testH5Rget_object: H5Rcreate_object " + err);
+    //        }
+    //        try {
+    //            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+    //            assertNotNull(ref);
+    //            assertTrue(dsid >= 0);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("TestH5Rget_region: " + err);
+    //        }
+    //        finally {
+    //            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+    //        }
+    //    }
+
+    //    @Test//
+    //    public void testH5Rget_attr() {
+    //        long loc_id = H5fid;
+    //        int ref_type = HDF5Constants.H5R_OBJECT2;
+    //        long ret_val = -1;
+    //        byte[] ref = null;
+    //        String name = "";
+    //        String objName = "/dset";
+    //
+    //        try {
+    //            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("testH5Rget_object: H5Rcreate_object " + err);
+    //        }
+    //        try {
+    //            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+    //            assertNotNull(ref);
+    //            assertTrue(dsid >= 0);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("TestH5Rget_region: " + err);
+    //        }
+    //        finally {
+    //            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+    //        }
+    //    }
 
     // Test parameters to H5Rcreate_object
     @Test(expected = NullPointerException.class)
-    public void testH5Rcreate_object_Nullname() throws Throwable {
+    public void testH5Rcreate_object_Nullname() throws Throwable
+    {
         String name = null;
         H5.H5Rcreate_object(H5fid, name, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Rget_name_Invalidloc() throws Throwable {
-        String name= "";
+    public void testH5Rget_name_Invalidloc() throws Throwable
+    {
+        String name = "";
         H5.H5Rcreate_object(-1, name, HDF5Constants.H5P_DEFAULT);
     }
 
     // Test parameters to H5Rcreate_region
     @Test(expected = NullPointerException.class)
-    public void testH5Rcreate_region_Nullname() throws Throwable {
+    public void testH5Rcreate_region_Nullname() throws Throwable
+    {
         String name = null;
         H5.H5Rcreate_region(H5fid, name, -1, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Rcreate_region_Invalidloc() throws Throwable {
-        String name= "";
+    public void testH5Rcreate_region_Invalidloc() throws Throwable
+    {
+        String name = "";
         H5.H5Rcreate_region(-1, name, -1, HDF5Constants.H5P_DEFAULT);
     }
 
     // Test parameters to H5Rcreate_attr
     @Test(expected = NullPointerException.class)
-    public void testH5Rcreate_attr_Nullname() throws Throwable {
-        String name = null;
+    public void testH5Rcreate_attr_Nullname() throws Throwable
+    {
+        String name     = null;
         String attrname = "";
         H5.H5Rcreate_attr(H5fid, name, attrname, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Rcreate_attr_Nullattrname() throws Throwable {
-        String name = "";
+    public void testH5Rcreate_attr_Nullattrname() throws Throwable
+    {
+        String name     = "";
         String attrname = null;
         H5.H5Rcreate_attr(H5fid, name, attrname, HDF5Constants.H5P_DEFAULT);
     }
 
     @Test(expected = HDF5FunctionArgumentException.class)
-    public void testH5Rcreate_attr_Invalidloc() throws Throwable {
-        String name= "";
-        String attrname= "";
+    public void testH5Rcreate_attr_Invalidloc() throws Throwable
+    {
+        String name     = "";
+        String attrname = "";
         H5.H5Rcreate_attr(-1, name, attrname, HDF5Constants.H5P_DEFAULT);
     }
 
     // Test parameters to H5Rdestroy
     @Test(expected = NullPointerException.class)
-    public void testH5Rdestroy_Nullref() throws Throwable {
+    public void testH5Rdestroy_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Rdestroy(ref);
     }
 
     // Test parameters to H5Rget_type
     @Test(expected = NullPointerException.class)
-    public void testH5Rget_type_Nullref() throws Throwable {
+    public void testH5Rget_type_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Rget_type(ref);
     }
 
     // Test parameters to H5Requal
     @Test(expected = NullPointerException.class)
-    public void testH5Requal_Nullref1() throws Throwable {
+    public void testH5Requal_Nullref1() throws Throwable
+    {
         byte[] ref1 = null;
-        byte[] ref2 = {0,0,0,0};
+        byte[] ref2 = {0, 0, 0, 0};
         H5.H5Requal(ref1, ref2);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Requal_Nullref2() throws Throwable {
-        byte[] ref1 = {0,0,0,0};
+    public void testH5Requal_Nullref2() throws Throwable
+    {
+        byte[] ref1 = {0, 0, 0, 0};
         byte[] ref2 = null;
         H5.H5Requal(ref1, ref2);
     }
 
     // Test parameters to H5Rcopy
     @Test(expected = NullPointerException.class)
-    public void testH5Rcopy_Nullref1() throws Throwable {
+    public void testH5Rcopy_Nullref1() throws Throwable
+    {
         byte[] ref1 = null;
         byte[] ref2 = H5.H5Rcopy(ref1);
     }
 
     // Test parameters to H5Ropen_object
     @Test(expected = NullPointerException.class)
-    public void testH5Ropen_object_Nullref() throws Throwable {
+    public void testH5Ropen_object_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Ropen_object(ref, -1, -1);
     }
 
     // Test parameters to H5Ropen_region
     @Test(expected = NullPointerException.class)
-    public void testH5Ropen_region_Nullref() throws Throwable {
+    public void testH5Ropen_region_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Ropen_region(ref, -1, -1);
     }
 
     // Test parameters to H5Ropen_attr
     @Test(expected = NullPointerException.class)
-    public void testH5Ropen_attr_Nullref() throws Throwable {
+    public void testH5Ropen_attr_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Ropen_attr(ref, -1, -1);
     }
 
     // Test parameters to H5Rget_obj_type3
     @Test(expected = NullPointerException.class)
-    public void testH5Rget_obj_type3_Nullref() throws Throwable {
+    public void testH5Rget_obj_type3_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Rget_obj_type3(ref, -1);
     }
 
     // Test parameters to H5Rget_file_name
     @Test(expected = NullPointerException.class)
-    public void testH5Rget_file_name_Nullref() throws Throwable {
+    public void testH5Rget_file_name_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Rget_file_name(ref);
     }
 
     // Test parameters to H5Rget_obj_name
     @Test(expected = NullPointerException.class)
-    public void testH5Rget_obj_name_Nullref() throws Throwable {
+    public void testH5Rget_obj_name_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Rget_obj_name(ref, -1);
     }
 
     // Test parameters to H5Rget_attr_name
     @Test(expected = NullPointerException.class)
-    public void testH5Rget_attr_name_Nullref() throws Throwable {
+    public void testH5Rget_attr_name_Nullref() throws Throwable
+    {
         byte[] ref = null;
         H5.H5Rget_attr_name(ref);
     }
-
 }
diff --git a/java/test/TestH5Rref.java b/java/test/TestH5Rref.java
index 5733aae..520de74 100644
--- a/java/test/TestH5Rref.java
+++ b/java/test/TestH5Rref.java
@@ -23,8 +23,8 @@ import java.io.File;
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5Exception;
-import hdf.hdf5lib.exceptions.HDF5LibraryException;
 import hdf.hdf5lib.exceptions.HDF5FunctionArgumentException;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
 import org.junit.After;
 import org.junit.Before;
@@ -34,14 +34,16 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Rref {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname                 = new TestName();
     private static final String H5_DREG_FILE = "trefer_reg.h5";
     private static final String H5_AREG_FILE = "trefer_attr.h5";
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5dsid = HDF5Constants.H5I_INVALID_HID;
-    long H5did = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                               = HDF5Constants.H5I_INVALID_HID;
+    long H5dsid                              = HDF5Constants.H5I_INVALID_HID;
+    long H5did                               = HDF5Constants.H5I_INVALID_HID;
 
-    private boolean byteArrayCheck(final byte[] array) {
+    private boolean byteArrayCheck(final byte[] array)
+    {
         for (byte b : array) {
             if (b != 0) {
                 return false;
@@ -50,67 +52,81 @@ public class TestH5Rref {
         return true;
     }
 
-    public void openH5file(String filename, String dsetname) {
-       try {
-           H5fid = H5.H5Fopen(filename,
-                   HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5R._openH5file: " + err);
-       }
-       assertTrue("TestH5R._openH5file: H5.H5Fopen: ", H5fid >= 0);
-       try {
-           H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5R._openH5file: " + err);
-       }
-       assertTrue("TestH5R._openH5file: H5.H5Dopen: ", H5did >= 0);
-       try {
-           H5dsid = H5.H5Dget_space(H5did);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("TestH5R._openH5file: " + err);
-       }
-       assertTrue("TestH5R._openH5file: H5.H5Screate_simple: ",H5dsid > 0);
+    public void openH5file(String filename, String dsetname)
+    {
+        try {
+            H5fid = H5.H5Fopen(filename, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5R._openH5file: " + err);
+        }
+        assertTrue("TestH5R._openH5file: H5.H5Fopen: ", H5fid >= 0);
+        try {
+            H5did = H5.H5Dopen(H5fid, dsetname, HDF5Constants.H5P_DEFAULT);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5R._openH5file: " + err);
+        }
+        assertTrue("TestH5R._openH5file: H5.H5Dopen: ", H5did >= 0);
+        try {
+            H5dsid = H5.H5Dget_space(H5did);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("TestH5R._openH5file: " + err);
+        }
+        assertTrue("TestH5R._openH5file: H5.H5Screate_simple: ", H5dsid > 0);
     }
 
     @After
-    public void closeH5file() throws HDF5LibraryException {
+    public void closeH5file() throws HDF5LibraryException
+    {
         if (H5did >= 0)
-            try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+            try {
+                H5.H5Dclose(H5did);
+            }
+            catch (Exception ex) {
+            }
         if (H5dsid > 0)
-            try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5dsid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
-        H5fid = HDF5Constants.H5I_INVALID_HID;
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
+        H5fid  = HDF5Constants.H5I_INVALID_HID;
         H5dsid = HDF5Constants.H5I_INVALID_HID;
-        H5did = HDF5Constants.H5I_INVALID_HID;
+        H5did  = HDF5Constants.H5I_INVALID_HID;
         System.out.println();
     }
 
     @Before
-    public void verifyCount()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+    public void verifyCount() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
 
     // Test v1.12 APIs params
 
     @Test
-    public void testH5Rget_object() {
-        int ref_type = HDF5Constants.H5R_OBJECT1;
-        long f_type = HDF5Constants.H5I_INVALID_HID;
-        int obj_type = -1;
-        int ndims = 1;
-        long ret_val = -1;
+    public void testH5Rget_object()
+    {
+        int ref_type    = HDF5Constants.H5R_OBJECT1;
+        long f_type     = HDF5Constants.H5I_INVALID_HID;
+        int obj_type    = -1;
+        int ndims       = 1;
+        long ret_val    = -1;
         byte[][] refbuf = null;
-        String name = "";
-        String objName = "/DS_NA";
+        String name     = "";
+        String objName  = "/DS_NA";
 
         try {
             openH5file(H5_DREG_FILE, objName);
@@ -120,18 +136,22 @@ public class TestH5Rref {
             fail("testH5Rget_object: openH5file: " + err);
         }
         try {
-            f_type = H5.H5Dget_type(H5did);
+            f_type     = H5.H5Dget_type(H5did);
             int result = H5.H5Tget_class(f_type);
             assertTrue("testH5Rget_object: H5Tget_class", result > 0);
             String class_name = H5.H5Tget_class_name(result);
-            assertTrue("testH5Rget_object: H5Tget_class", class_name.compareTo("H5T_REFERENCE")==0);
+            assertTrue("testH5Rget_object: H5Tget_class", class_name.compareTo("H5T_REFERENCE") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("testH5Rget_object: " + err);
         }
         finally {
-            try {H5.H5Tclose(f_type);} catch (Exception ex) {}
+            try {
+                H5.H5Tclose(f_type);
+            }
+            catch (Exception ex) {
+            }
         }
         try {
             ndims = (int)H5.H5Sget_simple_extent_npoints(H5dsid);
@@ -143,9 +163,8 @@ public class TestH5Rref {
         refbuf = new byte[ndims][HDF5Constants.H5R_REF_BUF_SIZE];
         // Read the reference from the dataset.
         try {
-            H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, refbuf);
+            H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, refbuf);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -155,7 +174,7 @@ public class TestH5Rref {
         for (int i = 0; i < ndims; i++) {
             try {
                 ret_val = H5.H5Rget_type(refbuf[i]);
-                assertTrue("testH5Rget_object: H5Rget_type["+i+"]="+ret_val, ret_val == ref_type);
+                assertTrue("testH5Rget_object: H5Rget_type[" + i + "]=" + ret_val, ret_val == ref_type);
                 if (!byteArrayCheck(refbuf[i])) {
                     try {
                         obj_type = H5.H5Rget_obj_type3(refbuf[i], HDF5Constants.H5P_DEFAULT);
@@ -178,14 +197,15 @@ public class TestH5Rref {
     }
 
     @Test
-    public void testH5Rget_obj_type3() {
-        long f_type = HDF5Constants.H5I_INVALID_HID;
-        int ref_type = HDF5Constants.H5R_DATASET_REGION2;
-        int obj_type = -1;
-        int ndims = 1;
-        long ret_val = -1;
+    public void testH5Rget_obj_type3()
+    {
+        long f_type     = HDF5Constants.H5I_INVALID_HID;
+        int ref_type    = HDF5Constants.H5R_DATASET_REGION2;
+        int obj_type    = -1;
+        int ndims       = 1;
+        long ret_val    = -1;
         byte[][] refbuf = null;
-        String objName = "/Dataset1";
+        String objName  = "/Dataset1";
 
         try {
             openH5file(H5_DREG_FILE, objName);
@@ -195,18 +215,23 @@ public class TestH5Rref {
             fail("testH5Rget_obj_type3: openH5file: " + err);
         }
         try {
-            f_type = H5.H5Dget_type(H5did);
+            f_type     = H5.H5Dget_type(H5did);
             int result = H5.H5Tget_class(f_type);
             assertTrue("testH5Rget_obj_type3: H5Tget_class", result > 0);
             String class_name = H5.H5Tget_class_name(result);
-            assertTrue("testH5Rget_obj_type3: H5Tget_class="+class_name, class_name.compareTo("H5T_REFERENCE")==0);
+            assertTrue("testH5Rget_obj_type3: H5Tget_class=" + class_name,
+                       class_name.compareTo("H5T_REFERENCE") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("testH5Rget_obj_type3: " + err);
         }
         finally {
-            try {H5.H5Tclose(f_type);} catch (Exception ex) {}
+            try {
+                H5.H5Tclose(f_type);
+            }
+            catch (Exception ex) {
+            }
         }
         try {
             ndims = (int)H5.H5Sget_simple_extent_npoints(H5dsid);
@@ -218,9 +243,8 @@ public class TestH5Rref {
         refbuf = new byte[ndims][HDF5Constants.H5R_REF_BUF_SIZE];
         // Read the reference from the dataset.
         try {
-            H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF,
-                        HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                        HDF5Constants.H5P_DEFAULT, refbuf);
+            H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, refbuf);
         }
         catch (Exception err) {
             err.printStackTrace();
@@ -230,7 +254,7 @@ public class TestH5Rref {
         for (int i = 0; i < ndims; i++) {
             try {
                 ret_val = H5.H5Rget_type(refbuf[i]);
-                assertTrue("testH5Rget_obj_type3: H5Rget_type["+i+"]="+ret_val, ret_val == ref_type);
+                assertTrue("testH5Rget_obj_type3: H5Rget_type[" + i + "]=" + ret_val, ret_val == ref_type);
                 if (!byteArrayCheck(refbuf[i])) {
                     try {
                         obj_type = H5.H5Rget_obj_type3(refbuf[i], HDF5Constants.H5P_DEFAULT);
@@ -252,312 +276,341 @@ public class TestH5Rref {
         }
     }
 
-  @Test
-  public void testH5Rget_region_dataset() {
-      long f_type = HDF5Constants.H5I_INVALID_HID;
-      long loc_id = HDF5Constants.H5I_INVALID_HID;
-      long loc_sid = HDF5Constants.H5I_INVALID_HID;
-      int ref_type = HDF5Constants.H5R_DATASET_REGION2;
-      int ndims = 1;
-      long ret_val = -1;
-      byte[][] refbuf = null;
-      String name = "";
-      String objName = "/Dataset1";
-
-      try {
-          openH5file(H5_DREG_FILE, objName);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_dataset: openH5file: " + err);
-      }
-      try {
-          f_type = H5.H5Dget_type(H5did);
-          int result = H5.H5Tget_class(f_type);
-          assertTrue("testH5Rget_region_dataset: H5Tget_class", result > 0);
-          String class_name = H5.H5Tget_class_name(result);
-          assertTrue("testH5Rget_region_dataset: H5Tget_class="+class_name, class_name.compareTo("H5T_REFERENCE")==0);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_dataset: " + err);
-      }
-      finally {
-          try {H5.H5Tclose(f_type);} catch (Exception ex) {}
-      }
-      try {
-          ndims = (int)H5.H5Sget_simple_extent_npoints(H5dsid);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_dataset: H5Sget_simple_extent_ndims: " + err);
-      }
-      refbuf = new byte[ndims][HDF5Constants.H5R_REF_BUF_SIZE];
-      // Read the reference from the dataset.
-      try {
-          H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF,
-                      HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                      HDF5Constants.H5P_DEFAULT, refbuf);
-      }
-      catch (Exception err) {
-          err.printStackTrace();
-          fail("testH5Rget_obj_type3: H5Dread: " + err);
-      }
-      for (int i = 0; i < ndims; i++) {
-          try {
-              try {
-                  ret_val = H5.H5Rget_type(refbuf[i]);
-              }
-              catch (Throwable err) {
-                  err.printStackTrace();
-                  fail("testH5Rget_region_dataset: H5Rget_type["+i+"]: " + err);
-              }
-              assertTrue("testH5Rget_region_dataset: H5Rget_type["+i+"]="+ret_val, ret_val == ref_type);
-              try {
-                  loc_id = H5.H5Ropen_object(refbuf[i], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-                  assertTrue(loc_id >= 0);
-                  try {
-                      loc_sid = H5.H5Ropen_region(refbuf[i], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-                      assertTrue(loc_sid >= 0);
-                      int region_type = -1;
-                      try {
-                          int reg_ndims = H5.H5Sget_simple_extent_ndims(loc_sid);
-                          region_type = H5.H5Sget_select_type(loc_sid);
-                          if (i == 1)
-                              assertTrue(region_type == HDF5Constants.H5S_SEL_POINTS);
-                          else
-                              assertTrue(region_type == HDF5Constants.H5S_SEL_HYPERSLABS);
-                          if (region_type == HDF5Constants.H5S_SEL_POINTS) {
-                              long reg_npoints = H5.H5Sget_select_elem_npoints(loc_sid);
-                              // Coordinates for get point selection
-                              long getcoord[] = new long[reg_ndims * (int)reg_npoints];
-                              // Known coordinates for point selection
-                              long coord[][] = {{6,9},{2,2},{8,4},{1,6},{2,8},{3,2},
-                                               {0,4},{9,0},{7,1},{3,3}};
-                              try {
-                                  H5.H5Sget_select_elem_pointlist(loc_sid, 0, reg_npoints, getcoord);
-                                  assertTrue("H5.H5Sget_select_elem_pointlist", coord[0][0] == getcoord[0]);
-                                  assertTrue("H5.H5Sget_select_elem_pointlist", coord[0][1] == getcoord[1]);
-                                  assertTrue("H5.H5Sget_select_elem_pointlist", coord[1][0] == getcoord[2]);
-                                  assertTrue("H5.H5Sget_select_elem_pointlist", coord[1][1] == getcoord[3]);
-                                  assertTrue("H5.H5Sget_select_elem_pointlist", coord[2][0] == getcoord[4]);
-                                  assertTrue("H5.H5Sget_select_elem_pointlist", coord[2][1] == getcoord[5]);
-                              }
-                              catch (Throwable err3) {
-                                  err3.printStackTrace();
-                                  fail("H5.H5Sget_select_elem_pointlist: " + err3);
-                              }
-                          }
-                          else if (region_type == HDF5Constants.H5S_SEL_HYPERSLABS) {
-                              long reg_nblocks = H5.H5Sget_select_hyper_nblocks(loc_sid);
-                              assertTrue("H5Sget_select_hyper_nblocks", reg_nblocks == 1);
-                              // Coordinates for get block selection
-                              long getblocks[] = new long[reg_ndims * (int)reg_nblocks * 2];
-                              long start[] = {2,2};
-                              long block[] = {8,8};
-                              try {
-                                  H5.H5Sget_select_hyper_blocklist(loc_sid, 0, reg_nblocks, getblocks);
-                                  assertTrue("H5.H5Sget_select_hyper_blocklist", start[0] == getblocks[0]);
-                                  assertTrue("H5.H5Sget_select_hyper_blocklist", start[1] == getblocks[1]);
-                                  assertTrue("H5.H5Sget_select_hyper_blocklist", (block[0]-1) == getblocks[2]);
-                                  assertTrue("H5.H5Sget_select_hyper_blocklist", (block[1]-1) == getblocks[3]);
-                              }
-                              catch (Throwable err3) {
-                                  err3.printStackTrace();
-                                  fail("H5.H5Sget_select_hyper_blocklist: " + err3);
-                              }
-                          }
-                      }
-                      catch (Throwable err2) {
-                          err2.printStackTrace();
-                          assertTrue("testH5Rget_region_dataset: H5Sget_select_type: " + err2, i > 1);
-                      }
-                  }
-                  catch (Throwable err1) {
-                      err1.printStackTrace();
-                      fail("testH5Rget_region_dataset: " + err1);
-                  }
-                  finally {
-                      try {H5.H5Sclose(loc_sid);} catch (Exception ex) {}
-                  }
-              }
-              catch (Throwable err0) {
-                  err0.printStackTrace();
-                  fail("testH5Rget_region_dataset: " + err0);
-              }
-              finally {
-                  try {H5.H5Dclose(loc_id);} catch (Exception ex) {}
-              }
-          }
-          catch (Throwable err) {
-              err.printStackTrace();
-              fail("testH5Rget_region_dataset: H5Rget_type: " + err);
-          }
-          finally {
-              H5.H5Rdestroy(refbuf[i]);
-          }
-      } //for (int i = 0; i < ndims; i++)
-  }
-
-  @Test
-  public void testH5Rget_region_attribute() {
-      long f_type = HDF5Constants.H5I_INVALID_HID;
-      long loc_id = HDF5Constants.H5I_INVALID_HID;
-      long loc_sid = HDF5Constants.H5I_INVALID_HID;
-      int ref_type = HDF5Constants.H5R_ATTR;
-      int obj_type = -1;
-      int ndims = 1;
-      long ret_val = -1;
-      byte[][] refbuf = null;
-      String objName = "/Dataset3";
+    @Test
+    public void testH5Rget_region_dataset()
+    {
+        long f_type     = HDF5Constants.H5I_INVALID_HID;
+        long loc_id     = HDF5Constants.H5I_INVALID_HID;
+        long loc_sid    = HDF5Constants.H5I_INVALID_HID;
+        int ref_type    = HDF5Constants.H5R_DATASET_REGION2;
+        int ndims       = 1;
+        long ret_val    = -1;
+        byte[][] refbuf = null;
+        String name     = "";
+        String objName  = "/Dataset1";
 
-      try {
-          openH5file(H5_AREG_FILE, objName);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_attribute: openH5file: " + err);
-      }
-      try {
-          f_type = H5.H5Dget_type(H5did);
-          int result = H5.H5Tget_class(f_type);
-          assertTrue("testH5Rget_region_attribute: H5Tget_class", result > 0);
-          String class_name = H5.H5Tget_class_name(result);
-          assertTrue("testH5Rget_region_attribute: H5Tget_class="+class_name, class_name.compareTo("H5T_REFERENCE")==0);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_attribute: " + err);
-      }
-      finally {
-          try {H5.H5Tclose(f_type);} catch (Exception ex) {}
-      }
-      try {
-          ndims = (int)H5.H5Sget_simple_extent_npoints(H5dsid);
-      }
-      catch (Throwable err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_attribute: H5Sget_simple_extent_ndims: " + err);
-      }
-      refbuf = new byte[ndims][HDF5Constants.H5R_REF_BUF_SIZE];
-      // Read the reference from the dataset.
-      try {
-          H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF,
-                      HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
-                      HDF5Constants.H5P_DEFAULT, refbuf);
-      }
-      catch (Exception err) {
-          err.printStackTrace();
-          fail("testH5Rget_region_attribute: H5Dread: " + err);
-      }
+        try {
+            openH5file(H5_DREG_FILE, objName);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_dataset: openH5file: " + err);
+        }
+        try {
+            f_type     = H5.H5Dget_type(H5did);
+            int result = H5.H5Tget_class(f_type);
+            assertTrue("testH5Rget_region_dataset: H5Tget_class", result > 0);
+            String class_name = H5.H5Tget_class_name(result);
+            assertTrue("testH5Rget_region_dataset: H5Tget_class=" + class_name,
+                       class_name.compareTo("H5T_REFERENCE") == 0);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_dataset: " + err);
+        }
+        finally {
+            try {
+                H5.H5Tclose(f_type);
+            }
+            catch (Exception ex) {
+            }
+        }
+        try {
+            ndims = (int)H5.H5Sget_simple_extent_npoints(H5dsid);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_dataset: H5Sget_simple_extent_ndims: " + err);
+        }
+        refbuf = new byte[ndims][HDF5Constants.H5R_REF_BUF_SIZE];
+        // Read the reference from the dataset.
+        try {
+            H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, refbuf);
+        }
+        catch (Exception err) {
+            err.printStackTrace();
+            fail("testH5Rget_obj_type3: H5Dread: " + err);
+        }
+        for (int i = 0; i < ndims; i++) {
+            try {
+                try {
+                    ret_val = H5.H5Rget_type(refbuf[i]);
+                }
+                catch (Throwable err) {
+                    err.printStackTrace();
+                    fail("testH5Rget_region_dataset: H5Rget_type[" + i + "]: " + err);
+                }
+                assertTrue("testH5Rget_region_dataset: H5Rget_type[" + i + "]=" + ret_val,
+                           ret_val == ref_type);
+                try {
+                    loc_id =
+                        H5.H5Ropen_object(refbuf[i], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                    assertTrue(loc_id >= 0);
+                    try {
+                        loc_sid = H5.H5Ropen_region(refbuf[i], HDF5Constants.H5P_DEFAULT,
+                                                    HDF5Constants.H5P_DEFAULT);
+                        assertTrue(loc_sid >= 0);
+                        int region_type = -1;
+                        try {
+                            int reg_ndims = H5.H5Sget_simple_extent_ndims(loc_sid);
+                            region_type   = H5.H5Sget_select_type(loc_sid);
+                            if (i == 1)
+                                assertTrue(region_type == HDF5Constants.H5S_SEL_POINTS);
+                            else
+                                assertTrue(region_type == HDF5Constants.H5S_SEL_HYPERSLABS);
+                            if (region_type == HDF5Constants.H5S_SEL_POINTS) {
+                                long reg_npoints = H5.H5Sget_select_elem_npoints(loc_sid);
+                                // Coordinates for get point selection
+                                long getcoord[] = new long[reg_ndims * (int)reg_npoints];
+                                // Known coordinates for point selection
+                                long coord[][] = {{6, 9}, {2, 2}, {8, 4}, {1, 6}, {2, 8},
+                                                  {3, 2}, {0, 4}, {9, 0}, {7, 1}, {3, 3}};
+                                try {
+                                    H5.H5Sget_select_elem_pointlist(loc_sid, 0, reg_npoints, getcoord);
+                                    assertTrue("H5.H5Sget_select_elem_pointlist", coord[0][0] == getcoord[0]);
+                                    assertTrue("H5.H5Sget_select_elem_pointlist", coord[0][1] == getcoord[1]);
+                                    assertTrue("H5.H5Sget_select_elem_pointlist", coord[1][0] == getcoord[2]);
+                                    assertTrue("H5.H5Sget_select_elem_pointlist", coord[1][1] == getcoord[3]);
+                                    assertTrue("H5.H5Sget_select_elem_pointlist", coord[2][0] == getcoord[4]);
+                                    assertTrue("H5.H5Sget_select_elem_pointlist", coord[2][1] == getcoord[5]);
+                                }
+                                catch (Throwable err3) {
+                                    err3.printStackTrace();
+                                    fail("H5.H5Sget_select_elem_pointlist: " + err3);
+                                }
+                            }
+                            else if (region_type == HDF5Constants.H5S_SEL_HYPERSLABS) {
+                                long reg_nblocks = H5.H5Sget_select_hyper_nblocks(loc_sid);
+                                assertTrue("H5Sget_select_hyper_nblocks", reg_nblocks == 1);
+                                // Coordinates for get block selection
+                                long getblocks[] = new long[reg_ndims * (int)reg_nblocks * 2];
+                                long start[]     = {2, 2};
+                                long block[]     = {8, 8};
+                                try {
+                                    H5.H5Sget_select_hyper_blocklist(loc_sid, 0, reg_nblocks, getblocks);
+                                    assertTrue("H5.H5Sget_select_hyper_blocklist", start[0] == getblocks[0]);
+                                    assertTrue("H5.H5Sget_select_hyper_blocklist", start[1] == getblocks[1]);
+                                    assertTrue("H5.H5Sget_select_hyper_blocklist",
+                                               (block[0] - 1) == getblocks[2]);
+                                    assertTrue("H5.H5Sget_select_hyper_blocklist",
+                                               (block[1] - 1) == getblocks[3]);
+                                }
+                                catch (Throwable err3) {
+                                    err3.printStackTrace();
+                                    fail("H5.H5Sget_select_hyper_blocklist: " + err3);
+                                }
+                            }
+                        }
+                        catch (Throwable err2) {
+                            err2.printStackTrace();
+                            assertTrue("testH5Rget_region_dataset: H5Sget_select_type: " + err2, i > 1);
+                        }
+                    }
+                    catch (Throwable err1) {
+                        err1.printStackTrace();
+                        fail("testH5Rget_region_dataset: " + err1);
+                    }
+                    finally {
+                        try {
+                            H5.H5Sclose(loc_sid);
+                        }
+                        catch (Exception ex) {
+                        }
+                    }
+                }
+                catch (Throwable err0) {
+                    err0.printStackTrace();
+                    fail("testH5Rget_region_dataset: " + err0);
+                }
+                finally {
+                    try {
+                        H5.H5Dclose(loc_id);
+                    }
+                    catch (Exception ex) {
+                    }
+                }
+            }
+            catch (Throwable err) {
+                err.printStackTrace();
+                fail("testH5Rget_region_dataset: H5Rget_type: " + err);
+            }
+            finally {
+                H5.H5Rdestroy(refbuf[i]);
+            }
+        } // for (int i = 0; i < ndims; i++)
+    }
 
-      for (int i = 0; i < ndims; i++) {
-          try {
-              ret_val = H5.H5Rget_type(refbuf[i]);
-              assertTrue("testH5Rget_region_attribute: H5Rget_type["+i+"]="+ret_val, ret_val == ref_type);
-              try {
-                  loc_id = H5.H5Ropen_attr(refbuf[i], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
-                  assertTrue(loc_id >= 0);
-                  if (!byteArrayCheck(refbuf[i])) {
-                      try {
-                          loc_sid = H5.H5Aget_space(loc_id);
-                          assertTrue(loc_sid >= 0);
-                      }
-                      catch (Throwable err1) {
-                          err1.printStackTrace();
-                          fail("testH5Rget_region_attribute: " + err1);
-                      }
-                      finally {
-                          try {H5.H5Sclose(loc_sid);} catch (Exception ex) {}
-                      }
-                  }
-              }
-              catch (Throwable err0) {
-                  err0.printStackTrace();
-                  // second attribute is null
-                  assertTrue("testH5Rget_region_attribute: " + err0, i == 1);
-              }
-              finally {
-                  try {H5.H5Aclose(loc_id);} catch (Exception ex) {}
-              }
-          }
-          catch (Throwable err) {
-              err.printStackTrace();
-              fail("testH5Rget_region_attribute: H5Rget_type: " + err);
-          }
-          finally {
-              H5.H5Rdestroy(refbuf[i]);
-          }
-      }
-  }
+    @Test
+    public void testH5Rget_region_attribute()
+    {
+        long f_type     = HDF5Constants.H5I_INVALID_HID;
+        long loc_id     = HDF5Constants.H5I_INVALID_HID;
+        long loc_sid    = HDF5Constants.H5I_INVALID_HID;
+        int ref_type    = HDF5Constants.H5R_ATTR;
+        int obj_type    = -1;
+        int ndims       = 1;
+        long ret_val    = -1;
+        byte[][] refbuf = null;
+        String objName  = "/Dataset3";
 
+        try {
+            openH5file(H5_AREG_FILE, objName);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_attribute: openH5file: " + err);
+        }
+        try {
+            f_type     = H5.H5Dget_type(H5did);
+            int result = H5.H5Tget_class(f_type);
+            assertTrue("testH5Rget_region_attribute: H5Tget_class", result > 0);
+            String class_name = H5.H5Tget_class_name(result);
+            assertTrue("testH5Rget_region_attribute: H5Tget_class=" + class_name,
+                       class_name.compareTo("H5T_REFERENCE") == 0);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_attribute: " + err);
+        }
+        finally {
+            try {
+                H5.H5Tclose(f_type);
+            }
+            catch (Exception ex) {
+            }
+        }
+        try {
+            ndims = (int)H5.H5Sget_simple_extent_npoints(H5dsid);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_attribute: H5Sget_simple_extent_ndims: " + err);
+        }
+        refbuf = new byte[ndims][HDF5Constants.H5R_REF_BUF_SIZE];
+        // Read the reference from the dataset.
+        try {
+            H5.H5Dread(H5did, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+                       HDF5Constants.H5P_DEFAULT, refbuf);
+        }
+        catch (Exception err) {
+            err.printStackTrace();
+            fail("testH5Rget_region_attribute: H5Dread: " + err);
+        }
 
-// These tests need to be updated with new APIs
-//    @Test//
-//    public void testH5Rget_group() {
-//        long loc_id = H5fid;
-//        int ref_type = HDF5Constants.H5R_OBJECT2;
-//        long ret_val = -1;
-//        byte[] ref = null;
-//        String name = "";
-//        String objName = "/dset";
-//
-//        try {
-//            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("testH5Rget_object: H5Rcreate_object " + err);
-//        }
-//        try {
-//            dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
-//
-//            //Create reference on group
-//            ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
-//            group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
-//            assertNotNull(ref1);
-//            assertNotNull(ref2);
-//            assertTrue(dataset_id >= 0);
-//            assertTrue(group_id >= 0);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("TestH5Rdereference " + err);
-//        }
-//        finally {
-//            try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
-//            try {H5.H5Gclose(group_id);} catch (Exception ex) {}
-//        }
-//    }
+        for (int i = 0; i < ndims; i++) {
+            try {
+                ret_val = H5.H5Rget_type(refbuf[i]);
+                assertTrue("testH5Rget_region_attribute: H5Rget_type[" + i + "]=" + ret_val,
+                           ret_val == ref_type);
+                try {
+                    loc_id = H5.H5Ropen_attr(refbuf[i], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+                    assertTrue(loc_id >= 0);
+                    if (!byteArrayCheck(refbuf[i])) {
+                        try {
+                            loc_sid = H5.H5Aget_space(loc_id);
+                            assertTrue(loc_sid >= 0);
+                        }
+                        catch (Throwable err1) {
+                            err1.printStackTrace();
+                            fail("testH5Rget_region_attribute: " + err1);
+                        }
+                        finally {
+                            try {
+                                H5.H5Sclose(loc_sid);
+                            }
+                            catch (Exception ex) {
+                            }
+                        }
+                    }
+                }
+                catch (Throwable err0) {
+                    err0.printStackTrace();
+                    // second attribute is null
+                    assertTrue("testH5Rget_region_attribute: " + err0, i == 1);
+                }
+                finally {
+                    try {
+                        H5.H5Aclose(loc_id);
+                    }
+                    catch (Exception ex) {
+                    }
+                }
+            }
+            catch (Throwable err) {
+                err.printStackTrace();
+                fail("testH5Rget_region_attribute: H5Rget_type: " + err);
+            }
+            finally {
+                H5.H5Rdestroy(refbuf[i]);
+            }
+        }
+    }
 
-//    @Test//
-//    public void testH5Rget_attr() {
-//        long loc_id = H5fid;
-//        int ref_type = HDF5Constants.H5R_OBJECT2;
-//        long ret_val = -1;
-//        byte[] ref = null;
-//        String name = "";
-//        String objName = "/dset";
-//
-//        try {
-//            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("testH5Rget_object: H5Rcreate_object " + err);
-//        }
-//        try {
-//            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
-//            assertNotNull(ref);
-//            assertTrue(dsid >= 0);
-//        }
-//        catch (Throwable err) {
-//            err.printStackTrace();
-//            fail("TestH5Rget_region: " + err);
-//        }
-//        finally {
-//            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
-//        }
-//    }
+    // These tests need to be updated with new APIs
+    //    @Test//
+    //    public void testH5Rget_group() {
+    //        long loc_id = H5fid;
+    //        int ref_type = HDF5Constants.H5R_OBJECT2;
+    //        long ret_val = -1;
+    //        byte[] ref = null;
+    //        String name = "";
+    //        String objName = "/dset";
+    //
+    //        try {
+    //            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("testH5Rget_object: H5Rcreate_object " + err);
+    //        }
+    //        try {
+    //            dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT,
+    //            HDF5Constants.H5R_DATASET_REGION, ref1);
+    //
+    //            //Create reference on group
+    //            ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
+    //            group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT,
+    //            ref2); assertNotNull(ref1); assertNotNull(ref2); assertTrue(dataset_id >= 0);
+    //            assertTrue(group_id >= 0);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("TestH5Rdereference " + err);
+    //        }
+    //        finally {
+    //            try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
+    //            try {H5.H5Gclose(group_id);} catch (Exception ex) {}
+    //        }
+    //    }
 
+    //    @Test//
+    //    public void testH5Rget_attr() {
+    //        long loc_id = H5fid;
+    //        int ref_type = HDF5Constants.H5R_OBJECT2;
+    //        long ret_val = -1;
+    //        byte[] ref = null;
+    //        String name = "";
+    //        String objName = "/dset";
+    //
+    //        try {
+    //            ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("testH5Rget_object: H5Rcreate_object " + err);
+    //        }
+    //        try {
+    //            dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+    //            assertNotNull(ref);
+    //            assertTrue(dsid >= 0);
+    //        }
+    //        catch (Throwable err) {
+    //            err.printStackTrace();
+    //            fail("TestH5Rget_region: " + err);
+    //        }
+    //        finally {
+    //            try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+    //        }
+    //    }
 }
diff --git a/java/test/TestH5S.java b/java/test/TestH5S.java
index 7eeed7a..6e081a6 100644
--- a/java/test/TestH5S.java
+++ b/java/test/TestH5S.java
@@ -12,10 +12,10 @@
 
 package test;
 
-
 import static org.junit.Assert.assertFalse;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5Exception;
@@ -28,16 +28,17 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5S {
-    @Rule public TestName testname = new TestName();
-    long H5sid = HDF5Constants.H5I_INVALID_HID;
-    int H5rank = 2;
-    long H5dims[] = {5, 5};
-    long H5maxdims[] = {10, 10};
+    @Rule
+    public TestName testname = new TestName();
+    long H5sid               = HDF5Constants.H5I_INVALID_HID;
+    int H5rank               = 2;
+    long H5dims[]            = {5, 5};
+    long H5maxdims[]         = {10, 10};
 
     @Before
-    public void createH5file()
-            throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
         H5sid = H5.H5Screate_simple(H5rank, H5dims, H5maxdims);
@@ -45,15 +46,21 @@ public class TestH5S {
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5sid > 0) {
-            try {H5.H5Sclose(H5sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(H5sid);
+            }
+            catch (Exception ex) {
+            }
         }
         System.out.println();
     }
 
     @Test
-    public void testH5Sget_simple_extent_ndims() {
+    public void testH5Sget_simple_extent_ndims()
+    {
         int read_rank = -1;
         try {
             read_rank = H5.H5Sget_simple_extent_ndims(H5sid);
@@ -66,7 +73,8 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_simple_extent_dims_null() {
+    public void testH5Sget_simple_extent_dims_null()
+    {
         int read_rank = -1;
 
         try {
@@ -80,9 +88,10 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_simple_extent_dims() {
-        int read_rank = -1;
-        long dims[] = {5, 5};
+    public void testH5Sget_simple_extent_dims()
+    {
+        int read_rank  = -1;
+        long dims[]    = {5, 5};
         long maxdims[] = {10, 10};
 
         try {
@@ -98,11 +107,12 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_simple_extent_npoints() {
+    public void testH5Sget_simple_extent_npoints()
+    {
         long num_elements = -1;
         try {
             num_elements = H5.H5Sget_simple_extent_npoints(H5sid);
-            assertTrue("H5.H5Sget_simple_extent_npoints", (H5dims[0]*H5dims[1]) == num_elements);
+            assertTrue("H5.H5Sget_simple_extent_npoints", (H5dims[0] * H5dims[1]) == num_elements);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -111,7 +121,8 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_simple_extent_type() {
+    public void testH5Sget_simple_extent_type()
+    {
         int read_type = -1;
         try {
             read_type = H5.H5Sget_simple_extent_type(H5sid);
@@ -124,7 +135,8 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sis_simple() {
+    public void testH5Sis_simple()
+    {
         boolean result = false;
 
         try {
@@ -138,12 +150,13 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sset_extent_simple() {
+    public void testH5Sset_extent_simple()
+    {
         long num_elements = -1;
         try {
             H5.H5Sset_extent_simple(H5sid, H5rank, H5maxdims, H5maxdims);
             num_elements = H5.H5Sget_simple_extent_npoints(H5sid);
-            assertTrue("H5.H5Sget_simple_extent_npoints", (H5maxdims[0]*H5maxdims[1]) == num_elements);
+            assertTrue("H5.H5Sget_simple_extent_npoints", (H5maxdims[0] * H5maxdims[1]) == num_elements);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -152,7 +165,8 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_select_type() {
+    public void testH5Sget_select_type()
+    {
         int read_type = -1;
         try {
             read_type = H5.H5Sget_select_type(H5sid);
@@ -165,12 +179,13 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sset_extent_none() {
+    public void testH5Sset_extent_none()
+    {
         int read_type = -1;
         try {
             H5.H5Sset_extent_none(H5sid);
             read_type = H5.H5Sget_simple_extent_type(H5sid);
-            assertTrue("H5.H5Sget_simple_extent_type: "+read_type, HDF5Constants.H5S_NULL == read_type);
+            assertTrue("H5.H5Sget_simple_extent_type: " + read_type, HDF5Constants.H5S_NULL == read_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -179,8 +194,9 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Scopy() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Scopy()
+    {
+        long sid      = HDF5Constants.H5I_INVALID_HID;
         int read_rank = -1;
 
         try {
@@ -194,13 +210,18 @@ public class TestH5S {
             fail("H5.H5Scopy: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Sextent_copy() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Sextent_copy()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         int class_type = -1;
 
         try {
@@ -215,18 +236,23 @@ public class TestH5S {
             fail("H5.H5Sextent_copy: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Sextent_equal() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Sextent_equal()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         boolean result = false;
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_NULL);
-            assertTrue("H5.H5Screate_null",sid > 0);
+            assertTrue("H5.H5Screate_null", sid > 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -235,7 +261,7 @@ public class TestH5S {
 
         try {
             result = H5.H5Sextent_equal(sid, H5sid);
-            assertFalse("H5.testH5Sextent_equal",result);
+            assertFalse("H5.testH5Sextent_equal", result);
             H5.H5Sextent_copy(sid, H5sid);
             result = H5.H5Sextent_equal(sid, H5sid);
             assertTrue("H5.testH5Sextent_equal", result);
@@ -245,16 +271,21 @@ public class TestH5S {
             fail("H5.H5Sextent_copy " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Sencode_decode_null_dataspace() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Sencode_decode_null_dataspace()
+    {
+        long sid         = HDF5Constants.H5I_INVALID_HID;
         long decoded_sid = HDF5Constants.H5I_INVALID_HID;
         byte[] null_sbuf = null;
-        boolean result = false;
+        boolean result   = false;
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_NULL);
@@ -267,21 +298,25 @@ public class TestH5S {
 
         try {
             null_sbuf = H5.H5Sencode(sid);
-            assertFalse("H5.testH5Sencode", null_sbuf==null);
+            assertFalse("H5.testH5Sencode", null_sbuf == null);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Sencode " + err);
         }
         finally {
-            if(null_sbuf == null) {
-                try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            if (null_sbuf == null) {
+                try {
+                    H5.H5Sclose(sid);
+                }
+                catch (Exception ex) {
+                }
             }
         }
 
         try {
             decoded_sid = H5.H5Sdecode(null_sbuf);
-            assertTrue("H5.testH5Sdecode", decoded_sid>0);
+            assertTrue("H5.testH5Sdecode", decoded_sid > 0);
 
             result = H5.H5Sextent_equal(sid, decoded_sid);
             assertTrue("H5.testH5Sextent_equal", result);
@@ -291,19 +326,28 @@ public class TestH5S {
             fail("H5.H5Sdecode " + err);
         }
         finally {
-            try {H5.H5Sclose(decoded_sid);} catch (Exception ex) {}
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(decoded_sid);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Sencode_decode_scalar_dataspace() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        long decoded_sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Sencode_decode_scalar_dataspace()
+    {
+        long sid           = HDF5Constants.H5I_INVALID_HID;
+        long decoded_sid   = HDF5Constants.H5I_INVALID_HID;
         byte[] scalar_sbuf = null;
-        boolean result = false;
-        int iresult = -1;
-        long lresult = -1;
+        boolean result     = false;
+        int iresult        = -1;
+        long lresult       = -1;
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SCALAR);
@@ -316,52 +360,65 @@ public class TestH5S {
 
         try {
             scalar_sbuf = H5.H5Sencode(sid);
-            assertFalse("H5.testH5Sencode", scalar_sbuf==null);
+            assertFalse("H5.testH5Sencode", scalar_sbuf == null);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Sencode " + err);
         }
         finally {
-            if(scalar_sbuf == null) {
-                try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            if (scalar_sbuf == null) {
+                try {
+                    H5.H5Sclose(sid);
+                }
+                catch (Exception ex) {
+                }
             }
         }
 
         try {
             decoded_sid = H5.H5Sdecode(scalar_sbuf);
-            assertTrue("H5.testH5Sdecode", decoded_sid>0);
+            assertTrue("H5.testH5Sdecode", decoded_sid > 0);
 
             result = H5.H5Sextent_equal(sid, decoded_sid);
             assertTrue("H5.testH5Sextent_equal", result);
 
             /* Verify decoded dataspace */
             lresult = H5.H5Sget_simple_extent_npoints(decoded_sid);
-            assertTrue("H5.testH5Sget_simple_extent_npoints", lresult==1);
+            assertTrue("H5.testH5Sget_simple_extent_npoints", lresult == 1);
 
             iresult = H5.H5Sget_simple_extent_ndims(decoded_sid);
-            assertTrue("H5.testH5Sget_simple_extent_ndims", iresult==0);
+            assertTrue("H5.testH5Sget_simple_extent_ndims", iresult == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Sdecode " + err);
         }
         finally {
-            try {H5.H5Sclose(decoded_sid);} catch (Exception ex) {}
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(decoded_sid);
+            }
+            catch (Exception ex) {
+            }
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Sselect_none() {
+    public void testH5Sselect_none()
+    {
         int read_type = -1;
         try {
             H5.H5Sselect_none(H5sid);
             read_type = H5.H5Sget_select_type(H5sid);
-            assertTrue("H5.H5Sget_select_type: "+read_type, HDF5Constants.H5S_SEL_NONE == read_type);
+            assertTrue("H5.H5Sget_select_type: " + read_type, HDF5Constants.H5S_SEL_NONE == read_type);
             H5.H5Sselect_all(H5sid);
             read_type = H5.H5Sget_select_type(H5sid);
-            assertTrue("H5.H5Sget_select_type: "+read_type, HDF5Constants.H5S_SEL_ALL == read_type);
+            assertTrue("H5.H5Sget_select_type: " + read_type, HDF5Constants.H5S_SEL_ALL == read_type);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -370,13 +427,14 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_select_npoints() {
-        long coord[][] = {{0,1},{2,4},{5,6}}; /* Coordinates for point selection */
+    public void testH5Sget_select_npoints()
+    {
+        long coord[][]    = {{0, 1}, {2, 4}, {5, 6}}; /* Coordinates for point selection */
         long num_elements = -1;
         try {
             H5.H5Sselect_elements(H5sid, HDF5Constants.H5S_SELECT_SET, 3, coord);
             num_elements = H5.H5Sget_select_npoints(H5sid);
-            assertTrue("H5.H5Sget_select_npoints: "+num_elements, 3 == num_elements);
+            assertTrue("H5.H5Sget_select_npoints: " + num_elements, 3 == num_elements);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -385,9 +443,10 @@ public class TestH5S {
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sget_select_elem_pointlist_invalid() throws Throwable {
-        long coord[][] = {{0,1},{2,4},{5,6}}; /* Coordinates for point selection */
-        long getcoord[] = {-1,-1}; /* Coordinates for get point selection */
+    public void testH5Sget_select_elem_pointlist_invalid() throws Throwable
+    {
+        long coord[][]  = {{0, 1}, {2, 4}, {5, 6}}; /* Coordinates for point selection */
+        long getcoord[] = {-1, -1};                 /* Coordinates for get point selection */
         try {
             H5.H5Sselect_elements(H5sid, HDF5Constants.H5S_SELECT_SET, 3, coord);
         }
@@ -399,9 +458,10 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_select_elem_pointlist() {
-        long coord[][] = {{0,1},{2,3},{4,5}}; /* Coordinates for point selection */
-        long getcoord[] = {-1,-1,-1,-1,-1,-1}; /* Coordinates for get point selection */
+    public void testH5Sget_select_elem_pointlist()
+    {
+        long coord[][]  = {{0, 1}, {2, 3}, {4, 5}}; /* Coordinates for point selection */
+        long getcoord[] = {-1, -1, -1, -1, -1, -1}; /* Coordinates for get point selection */
         try {
             H5.H5Sselect_elements(H5sid, HDF5Constants.H5S_SELECT_SET, 3, coord);
             H5.H5Sget_select_elem_pointlist(H5sid, 0, 3, getcoord);
@@ -419,15 +479,16 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_select_bounds() {
-        long lowbounds[] = {-1,-1};
-        long hibounds[] = {-1,-1};
+    public void testH5Sget_select_bounds()
+    {
+        long lowbounds[] = {-1, -1};
+        long hibounds[]  = {-1, -1};
         try {
             H5.H5Sget_select_bounds(H5sid, lowbounds, hibounds);
             assertTrue("H5.H5Sget_select_bounds", 0 == lowbounds[0]);
             assertTrue("H5.H5Sget_select_bounds", 0 == lowbounds[1]);
-            assertTrue("H5.H5Sget_select_bounds", (H5dims[0]-1) == hibounds[0]);
-            assertTrue("H5.H5Sget_select_bounds", (H5dims[1]-1) == hibounds[1]);
+            assertTrue("H5.H5Sget_select_bounds", (H5dims[0] - 1) == hibounds[0]);
+            assertTrue("H5.H5Sget_select_bounds", (H5dims[1] - 1) == hibounds[1]);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -436,30 +497,31 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Soffset_simple() {
-        long coord[][] = {{2,2},{2,4},{4,2},{4,4}}; /* Coordinates for point selection */
-        long lowbounds[] = {-1,-1};
-        long hibounds[] = {-1,-1};
+    public void testH5Soffset_simple()
+    {
+        long coord[][]   = {{2, 2}, {2, 4}, {4, 2}, {4, 4}}; /* Coordinates for point selection */
+        long lowbounds[] = {-1, -1};
+        long hibounds[]  = {-1, -1};
         try {
             H5.H5Sselect_elements(H5sid, HDF5Constants.H5S_SELECT_SET, 4, coord);
             H5.H5Sget_select_bounds(H5sid, lowbounds, hibounds);
             assertTrue("H5.H5Sget_select_bounds", 2 == lowbounds[0]);
             assertTrue("H5.H5Sget_select_bounds", 2 == lowbounds[1]);
-            assertTrue("H5.H5Sget_select_bounds", (H5dims[0]-1) == hibounds[0]);
-            assertTrue("H5.H5Sget_select_bounds", (H5dims[1]-1) == hibounds[1]);
+            assertTrue("H5.H5Sget_select_bounds", (H5dims[0] - 1) == hibounds[0]);
+            assertTrue("H5.H5Sget_select_bounds", (H5dims[1] - 1) == hibounds[1]);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Sget_select_bounds: " + err);
         }
         try {
-            long offset[] = {-1,-1};
+            long offset[] = {-1, -1};
             H5.H5Soffset_simple(H5sid, offset);
             H5.H5Sget_select_bounds(H5sid, lowbounds, hibounds);
             assertTrue("H5.H5Sget_select_bounds", 1 == lowbounds[0]);
             assertTrue("H5.H5Sget_select_bounds", 1 == lowbounds[1]);
-            assertTrue("H5.H5Sget_select_bounds", (H5dims[0]-2) == hibounds[0]);
-            assertTrue("H5.H5Sget_select_bounds", (H5dims[1]-2) == hibounds[1]);
+            assertTrue("H5.H5Sget_select_bounds", (H5dims[0] - 2) == hibounds[0]);
+            assertTrue("H5.H5Sget_select_bounds", (H5dims[1] - 2) == hibounds[1]);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -468,14 +530,15 @@ public class TestH5S {
     }
 
     @Test
-    public void testH5Sget_select_hyper() {
-        long space1 = HDF5Constants.H5I_INVALID_HID;
-        long start[] = {0,0};
-        long stride[] = {1,1};
-        long count[] = {1,1};
-        long block[] = {4,4};
-        long nblocks;   // Number of hyperslab blocks
-        long blocks[] = {-1, -1, -1, -1, -1, -1, -1, -1};    // List of blocks
+    public void testH5Sget_select_hyper()
+    {
+        long space1   = HDF5Constants.H5I_INVALID_HID;
+        long start[]  = {0, 0};
+        long stride[] = {1, 1};
+        long count[]  = {1, 1};
+        long block[]  = {4, 4};
+        long nblocks;                                     // Number of hyperslab blocks
+        long blocks[] = {-1, -1, -1, -1, -1, -1, -1, -1}; // List of blocks
         try {
             // Copy "all" selection & space
             space1 = H5.H5Scopy(H5sid);
@@ -493,26 +556,31 @@ public class TestH5S {
             // Verify that the correct block is defined
             assertTrue("H5.H5Sget_select_hyper_blocklist", start[0] == blocks[0]);
             assertTrue("H5.H5Sget_select_hyper_blocklist", start[1] == blocks[1]);
-            assertTrue("H5.H5Sget_select_hyper_blocklist", (block[0]-1) == blocks[2]);
-            assertTrue("H5.H5Sget_select_hyper_blocklist", (block[1]-1) == blocks[3]);
+            assertTrue("H5.H5Sget_select_hyper_blocklist", (block[0] - 1) == blocks[2]);
+            assertTrue("H5.H5Sget_select_hyper_blocklist", (block[1] - 1) == blocks[3]);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Sget_select_bounds: " + err);
         }
         finally {
-            try {H5.H5Sclose(space1);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(space1);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Sget_select_valid() {
-        long space1 = HDF5Constants.H5I_INVALID_HID;
-        long start[] = {1,0};
-        long stride[] = {1,1};
-        long count[] = {2,3};
-        long block[] = {1,1};
-        long offset[] = {0,0};    // Offset of selection
+    public void testH5Sget_select_valid()
+    {
+        long space1   = HDF5Constants.H5I_INVALID_HID;
+        long start[]  = {1, 0};
+        long stride[] = {1, 1};
+        long count[]  = {2, 3};
+        long block[]  = {1, 1};
+        long offset[] = {0, 0}; // Offset of selection
 
         try {
             // Copy "all" selection & space
@@ -522,20 +590,20 @@ public class TestH5S {
             H5.H5Sselect_hyperslab(space1, HDF5Constants.H5S_SELECT_SET, start, stride, count, block);
 
             // Check a valid offset
-            offset[0]=-1;
-            offset[1]=0;
+            offset[0] = -1;
+            offset[1] = 0;
             H5.H5Soffset_simple(space1, offset);
             assertTrue("H5Sselect_valid", H5.H5Sselect_valid(space1));
 
             // Check an invalid offset
-            offset[0]=10;
-            offset[1]=0;
+            offset[0] = 10;
+            offset[1] = 0;
             H5.H5Soffset_simple(space1, offset);
             assertFalse("H5Sselect_valid", H5.H5Sselect_valid(space1));
 
             /* Reset offset */
-            offset[0]=0;
-            offset[1]=0;
+            offset[0] = 0;
+            offset[1] = 0;
             H5.H5Soffset_simple(space1, offset);
             assertTrue("H5Sselect_valid", H5.H5Sselect_valid(space1));
         }
@@ -544,20 +612,25 @@ public class TestH5S {
             fail("testH5Sget_select_valid: " + err);
         }
         finally {
-            try {H5.H5Sclose(space1);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(space1);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Shyper_regular() {
-        long start[] = {1,0};
-        long stride[] = {1,1};
-        long count[] = {2,3};
-        long block[] = {1,1};
-        long q_start[] = new long[2];
-        long q_stride[] = new long[2];
-        long q_count[] = new long[2];
-        long q_block[] = new long[2];
+    public void testH5Shyper_regular()
+    {
+        long start[]       = {1, 0};
+        long stride[]      = {1, 1};
+        long count[]       = {2, 3};
+        long block[]       = {1, 1};
+        long q_start[]     = new long[2];
+        long q_stride[]    = new long[2];
+        long q_count[]     = new long[2];
+        long q_block[]     = new long[2];
         boolean is_regular = false;
 
         try {
@@ -572,7 +645,7 @@ public class TestH5S {
             H5.H5Sget_regular_hyperslab(H5sid, q_start, q_stride, q_count, q_block);
 
             /* Verify the hyperslab parameters */
-            for(int u = 0; u < H5rank; u++) {
+            for (int u = 0; u < H5rank; u++) {
                 assertTrue("H5Sget_regular_hyperslab, start", start[u] == q_start[u]);
                 assertTrue("H5Sget_regular_hyperslab, stride", stride[u] == q_stride[u]);
                 assertTrue("H5Sget_regular_hyperslab, count", count[u] == q_count[u]);
diff --git a/java/test/TestH5Sbasic.java b/java/test/TestH5Sbasic.java
index 548ac95..3b92c92 100644
--- a/java/test/TestH5Sbasic.java
+++ b/java/test/TestH5Sbasic.java
@@ -14,6 +14,7 @@ package test;
 
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
@@ -25,56 +26,68 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Sbasic {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
-    @Test//(expected = HDF5LibraryException.class)
-    public void testH5Sclose_invalid() throws Throwable {
+    @Test //(expected = HDF5LibraryException.class)
+    public void testH5Sclose_invalid() throws Throwable
+    {
         long sid = H5.H5Sclose(-1);
         assertTrue(sid == 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Screate_invalid() throws Throwable {
+    public void testH5Screate_invalid() throws Throwable
+    {
         H5.H5Screate(-1);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sget_simple_extent_type_invalid() throws Throwable {
+    public void testH5Sget_simple_extent_type_invalid() throws Throwable
+    {
         H5.H5Sget_simple_extent_type(-1);
     }
 
     @Test
-    public void testH5Screate_scalar() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Screate_scalar()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         int class_type = -1;
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SCALAR);
-            assertTrue("H5.H5Screate_scalar",sid > 0);
+            assertTrue("H5.H5Screate_scalar", sid > 0);
             class_type = H5.H5Sget_simple_extent_type(sid);
-            assertTrue("H5.H5Screate_scalar: type",class_type == HDF5Constants.H5S_SCALAR);
+            assertTrue("H5.H5Screate_scalar: type", class_type == HDF5Constants.H5S_SCALAR);
         }
         catch (Throwable err) {
             err.printStackTrace();
             fail("H5.H5Screate: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Screate_null() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Screate_null()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         int class_type = -1;
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_NULL);
@@ -87,47 +100,56 @@ public class TestH5Sbasic {
             fail("H5.H5Screate: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Screate_simple_dims_null() throws Throwable {
+    public void testH5Screate_simple_dims_null() throws Throwable
+    {
         H5.H5Screate_simple(2, (long[])null, null);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Screate_simple_rank_invalid() throws Throwable {
+    public void testH5Screate_simple_rank_invalid() throws Throwable
+    {
         long dims[] = {5, 5};
         H5.H5Screate_simple(-1, dims, null);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Screate_simple_dims_invalid() throws Throwable {
+    public void testH5Screate_simple_dims_invalid() throws Throwable
+    {
         long dims[] = {2, 2};
         H5.H5Screate_simple(5, dims, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Screate_simple_dims_exceed() throws Throwable {
-        long dims[] = {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,
-                21,22,23,24,25,26,27,28,29,30,31,32,33,35};
+    public void testH5Screate_simple_dims_exceed() throws Throwable
+    {
+        long dims[] = {0,  1,  2,  3,  4,  5,  6,  7,  8,  9,  10, 11, 12, 13, 14, 15, 16, 17,
+                       18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 35};
         H5.H5Screate_simple(35, dims, null);
     }
 
-//H5Screate_simple was changed to allow a dim of 0
-//    @Ignore(expected = HDF5LibraryException.class)
-//    public void testH5Screate_simple_dims_zero() {
-//        long dims[] = {0, 0};
-//        H5.H5Screate_simple(2, dims, null);
-//    }
+    // H5Screate_simple was changed to allow a dim of 0
+    //     @Ignore(expected = HDF5LibraryException.class)
+    //     public void testH5Screate_simple_dims_zero() {
+    //         long dims[] = {0, 0};
+    //         H5.H5Screate_simple(2, dims, null);
+    //     }
 
     @Test
-    public void testH5Screate_simple() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Screate_simple()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         int class_type = -1;
-        int rank = 2;
-        long dims[] = {5, 5};
+        int rank       = 2;
+        long dims[]    = {5, 5};
         long maxdims[] = {10, 10};
 
         try {
@@ -141,16 +163,21 @@ public class TestH5Sbasic {
             fail("H5.H5Screate_simple: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Screate_simple_unlimted() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Screate_simple_unlimted()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         int class_type = -1;
-        int rank = 2;
-        long dims[] = {5, 5};
+        int rank       = 2;
+        long dims[]    = {5, 5};
         long maxdims[] = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED};
 
         try {
@@ -164,16 +191,21 @@ public class TestH5Sbasic {
             fail("H5.H5Screate_simple: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Screate_simple_unlimted_1d() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Screate_simple_unlimted_1d()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
         int class_type = -1;
-        int rank = 1;
-        long dims[] = {5};
+        int rank       = 1;
+        long dims[]    = {5};
         long maxdims[] = {HDF5Constants.H5S_UNLIMITED};
 
         try {
@@ -187,14 +219,19 @@ public class TestH5Sbasic {
             fail("H5.H5Screate_simple: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Screate_simple_max_default() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        int rank = 2;
+    public void testH5Screate_simple_max_default()
+    {
+        long sid    = HDF5Constants.H5I_INVALID_HID;
+        int rank    = 2;
         long dims[] = {5, 5};
 
         try {
@@ -206,20 +243,25 @@ public class TestH5Sbasic {
             fail("H5.H5Screate_simple: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test
-    public void testH5Screate_simple_extent() {
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        int rank = 2;
-        long dims[] = {5, 5};
+    public void testH5Screate_simple_extent()
+    {
+        long sid       = HDF5Constants.H5I_INVALID_HID;
+        int rank       = 2;
+        long dims[]    = {5, 5};
         long maxdims[] = {10, 10};
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
-            assertTrue("H5.H5Screate_simple_extent",sid > 0);
+            assertTrue("H5.H5Screate_simple_extent", sid > 0);
             H5.H5Sset_extent_simple(sid, rank, dims, maxdims);
         }
         catch (Throwable err) {
@@ -227,156 +269,195 @@ public class TestH5Sbasic {
             fail("H5.H5Screate: " + err);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sencode_invalid() throws Throwable {
+    public void testH5Sencode_invalid() throws Throwable
+    {
         H5.H5Sencode(-1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Sdecode_null() throws Throwable {
+    public void testH5Sdecode_null() throws Throwable
+    {
         H5.H5Sdecode(null);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sget_regular_hyperslab_invalid() throws Throwable {
-        long q_start[] = new long[2];
+    public void testH5Sget_regular_hyperslab_invalid() throws Throwable
+    {
+        long q_start[]  = new long[2];
         long q_stride[] = new long[2];
-        long q_count[] = new long[2];
-        long q_block[] = new long[2];
+        long q_count[]  = new long[2];
+        long q_block[]  = new long[2];
 
         H5.H5Sget_regular_hyperslab(-1, q_start, q_stride, q_count, q_block);
     }
 
     @Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
-    public void testH5Sselect_copy_invalid() throws Throwable {
+    public void testH5Sselect_copy_invalid() throws Throwable
+    {
         H5.H5Sselect_copy(-1, -1);
     }
 
     @Test(expected = hdf.hdf5lib.exceptions.HDF5DataspaceInterfaceException.class)
-    public void testH5Sselect_shape_same_invalid() throws Throwable {
+    public void testH5Sselect_shape_same_invalid() throws Throwable
+    {
         H5.H5Sselect_shape_same(-1, -1);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sselect_adjust_invalid() throws Throwable {
-        long offset[][] = {{0,1},{2,4},{5,6}};
+    public void testH5Sselect_adjust_invalid() throws Throwable
+    {
+        long offset[][] = {{0, 1}, {2, 4}, {5, 6}};
         H5.H5Sselect_adjust(-1, offset);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sselect_adjust_rank_offset() throws Throwable {
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        long offset[][] = {{0,1},{2,4},{5,6}};
+    public void testH5Sselect_adjust_rank_offset() throws Throwable
+    {
+        long sid        = HDF5Constants.H5I_INVALID_HID;
+        long offset[][] = {{0, 1}, {2, 4}, {5, 6}};
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
-            assertTrue("H5.H5Screate_simple_extent",sid > 0);
+            assertTrue("H5.H5Screate_simple_extent", sid > 0);
             H5.H5Sselect_adjust(sid, offset);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sselect_intersect_block_invalid() throws Throwable {
+    public void testH5Sselect_intersect_block_invalid() throws Throwable
+    {
         long start[] = new long[2];
-        long end[] = new long[2];
+        long end[]   = new long[2];
         H5.H5Sselect_intersect_block(-1, start, end);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sselect_intersect_block_rank_start() throws Throwable {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Sselect_intersect_block_rank_start() throws Throwable
+    {
+        long sid     = HDF5Constants.H5I_INVALID_HID;
         long start[] = new long[2];
-        long end[] = null;
+        long end[]   = null;
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
-            assertTrue("H5.H5Screate_simple_extent",sid > 0);
+            assertTrue("H5.H5Screate_simple_extent", sid > 0);
             H5.H5Sselect_intersect_block(sid, start, end);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Sselect_intersect_block_rank_end() throws Throwable {
-        long sid = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Sselect_intersect_block_rank_end() throws Throwable
+    {
+        long sid     = HDF5Constants.H5I_INVALID_HID;
         long start[] = null;
-        long end[] = new long[2];
+        long end[]   = new long[2];
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
-            assertTrue("H5.H5Screate_simple_extent",sid > 0);
+            assertTrue("H5.H5Screate_simple_extent", sid > 0);
             H5.H5Sselect_intersect_block(sid, start, end);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = hdf.hdf5lib.exceptions.HDF5DataspaceInterfaceException.class)
-    public void testH5Sselect_project_intersection_invalid() throws Throwable {
+    public void testH5Sselect_project_intersection_invalid() throws Throwable
+    {
         H5.H5Sselect_project_intersection(-1, -1, -1);
     }
 
     @Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
-    public void testH5Scombine_hyperslab_invalid() throws Throwable {
+    public void testH5Scombine_hyperslab_invalid() throws Throwable
+    {
         long start[] = new long[2];
         long count[] = new long[2];
         H5.H5Scombine_hyperslab(-1, 0, start, null, count, null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Scombine_hyperslab_null_start() throws Throwable {
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        long start[] = null;
+    public void testH5Scombine_hyperslab_null_start() throws Throwable
+    {
+        long sid      = HDF5Constants.H5I_INVALID_HID;
+        long start[]  = null;
         long stride[] = null;
-        long count[] = new long[2];
-        long block[] = null;
+        long count[]  = new long[2];
+        long block[]  = null;
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
-            assertTrue("H5.H5Screate_simple_extent",sid > 0);
+            assertTrue("H5.H5Screate_simple_extent", sid > 0);
             H5.H5Scombine_hyperslab(sid, 0, start, stride, count, block);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Scombine_hyperslab_null_count() throws Throwable {
-        long sid = HDF5Constants.H5I_INVALID_HID;
-        long start[] = new long[2];
+    public void testH5Scombine_hyperslab_null_count() throws Throwable
+    {
+        long sid      = HDF5Constants.H5I_INVALID_HID;
+        long start[]  = new long[2];
         long stride[] = null;
-        long count[] = null;
-        long block[] = null;
+        long count[]  = null;
+        long block[]  = null;
 
         try {
             sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
-            assertTrue("H5.H5Screate_simple_extent",sid > 0);
+            assertTrue("H5.H5Screate_simple_extent", sid > 0);
             H5.H5Scombine_hyperslab(sid, 0, start, stride, count, block);
         }
         finally {
-            try {H5.H5Sclose(sid);} catch (Exception ex) {}
+            try {
+                H5.H5Sclose(sid);
+            }
+            catch (Exception ex) {
+            }
         }
     }
 
     @Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
-    public void testH5Smodify_select_invalid() throws Throwable {
+    public void testH5Smodify_select_invalid() throws Throwable
+    {
         H5.H5Smodify_select(-1, 0, -1);
     }
 
     @Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
-    public void testH5Scombine_select_invalid() throws Throwable {
+    public void testH5Scombine_select_invalid() throws Throwable
+    {
         H5.H5Scombine_select(-1, 0, -1);
     }
-
 }
diff --git a/java/test/TestH5T.java b/java/test/TestH5T.java
index ed4e2a9..0121cc2 100644
--- a/java/test/TestH5T.java
+++ b/java/test/TestH5T.java
@@ -30,30 +30,38 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5T {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname            = new TestName();
     private static final String H5_FILE = "testT.h5";
-    long H5fid = HDF5Constants.H5I_INVALID_HID;
-    long H5strdid = HDF5Constants.H5I_INVALID_HID;
+    long H5fid                          = HDF5Constants.H5I_INVALID_HID;
+    long H5strdid                       = HDF5Constants.H5I_INVALID_HID;
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = null;
         try {
             file = new File(filename);
         }
-        catch (Throwable err) {}
+        catch (Throwable err) {
+        }
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void createH5file() throws NullPointerException, HDF5Exception {
-        assertTrue("H5 open ids is 0", H5.getOpenIDCount()==0);
+    public void createH5file() throws NullPointerException, HDF5Exception
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
 
-        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                             HDF5Constants.H5P_DEFAULT);
         assertTrue("H5.H5Fcreate", H5fid > 0);
         H5strdid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
         assertTrue("H5.H5Tcopy", H5strdid > 0);
@@ -62,28 +70,39 @@ public class TestH5T {
     }
 
     @After
-    public void deleteH5file() throws HDF5LibraryException {
+    public void deleteH5file() throws HDF5LibraryException
+    {
         if (H5strdid >= 0)
-            try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
+            try {
+                H5.H5Tclose(H5strdid);
+            }
+            catch (Exception ex) {
+            }
         if (H5fid > 0)
-            try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+            try {
+                H5.H5Fclose(H5fid);
+            }
+            catch (Exception ex) {
+            }
 
         _deleteFile(H5_FILE);
         System.out.println();
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tequal_type_error() throws Throwable {
+    public void testH5Tequal_type_error() throws Throwable
+    {
         H5.H5Tequal(HDF5Constants.H5T_INTEGER, H5strdid);
     }
 
     @Test
-    public void testH5Tget_class() {
+    public void testH5Tget_class()
+    {
         try {
             int result = H5.H5Tget_class(H5strdid);
             assertTrue("H5.H5Tget_class", result > 0);
             String class_name = H5.H5Tget_class_name(result);
-            assertTrue("H5.H5Tget_class", class_name.compareTo("H5T_STRING")==0);
+            assertTrue("H5.H5Tget_class", class_name.compareTo("H5T_STRING") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -92,7 +111,8 @@ public class TestH5T {
     }
 
     @Test
-    public void testH5Tget_size() {
+    public void testH5Tget_size()
+    {
         long dt_size = -1;
 
         try {
@@ -106,7 +126,8 @@ public class TestH5T {
     }
 
     @Test
-    public void testH5Tset_size() {
+    public void testH5Tset_size()
+    {
         long dt_size = 5;
 
         try {
@@ -127,89 +148,105 @@ public class TestH5T {
     }
 
     @Test
-    public void testH5Tarray_create() {
-       long filetype_id = HDF5Constants.H5I_INVALID_HID;
-       long[] adims = { 3, 5 };
-
-       try {
-           filetype_id = H5.H5Tarray_create(HDF5Constants.H5T_STD_I64LE, 2, adims);
-           assertTrue("testH5Tarray_create", filetype_id >= 0);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tarray_create.H5Tarray_create " + err);
-       }
-       finally {
-           if (filetype_id >= 0)
-               try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
-       }
+    public void testH5Tarray_create()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
+        long[] adims     = {3, 5};
+
+        try {
+            filetype_id = H5.H5Tarray_create(HDF5Constants.H5T_STD_I64LE, 2, adims);
+            assertTrue("testH5Tarray_create", filetype_id >= 0);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tarray_create.H5Tarray_create " + err);
+        }
+        finally {
+            if (filetype_id >= 0)
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
+        }
     }
 
     @Test
-    public void testH5Tget_array_ndims() {
-       long filetype_id = HDF5Constants.H5I_INVALID_HID;
-       int ndims = 0;
-       long[] adims = { 3, 5 };
-
-       try {
-           filetype_id = H5.H5Tarray_create(HDF5Constants.H5T_STD_I64LE, 2, adims);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tarray_create.H5Tarray_create " + err);
-       }
-       assertTrue("testH5Tget_array_ndims:H5Tarray_create", filetype_id >= 0);
-       try {
-           ndims = H5.H5Tget_array_ndims(filetype_id);
-           assertTrue("testH5Tget_array_ndims", ndims == 2);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tget_array_ndims.H5Tget_array_ndims " + err);
-       }
-       finally {
-           if (filetype_id >= 0)
-               try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
-       }
+    public void testH5Tget_array_ndims()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
+        int ndims        = 0;
+        long[] adims     = {3, 5};
+
+        try {
+            filetype_id = H5.H5Tarray_create(HDF5Constants.H5T_STD_I64LE, 2, adims);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tarray_create.H5Tarray_create " + err);
+        }
+        assertTrue("testH5Tget_array_ndims:H5Tarray_create", filetype_id >= 0);
+        try {
+            ndims = H5.H5Tget_array_ndims(filetype_id);
+            assertTrue("testH5Tget_array_ndims", ndims == 2);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tget_array_ndims.H5Tget_array_ndims " + err);
+        }
+        finally {
+            if (filetype_id >= 0)
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
+        }
     }
 
     @Test
-    public void testH5Tget_array_dims() {
-       long filetype_id = HDF5Constants.H5I_INVALID_HID;
-       int ndims = 0;
-       long[] adims = { 3, 5 };
-       long[] rdims = new long[2];
-
-       try {
-           filetype_id = H5.H5Tarray_create(HDF5Constants.H5T_STD_I64LE, 2, adims);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tarray_create.H5Tarray_create " + err);
-       }
-       assertTrue("testH5Tget_array_dims:H5Tarray_create", filetype_id >= 0);
-       try {
-           ndims = H5.H5Tget_array_dims(filetype_id, rdims);
-           assertTrue("testH5Tget_array_dims", ndims == 2);
-           assertTrue("testH5Tget_array_dims", adims[0] == rdims[0]);
-           assertTrue("testH5Tget_array_dims", adims[1] == rdims[1]);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tget_array_dims.H5Tget_array_dims " + err);
-       }
-       finally {
-           if (filetype_id >= 0)
-               try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
-       }
+    public void testH5Tget_array_dims()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
+        int ndims        = 0;
+        long[] adims     = {3, 5};
+        long[] rdims     = new long[2];
+
+        try {
+            filetype_id = H5.H5Tarray_create(HDF5Constants.H5T_STD_I64LE, 2, adims);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tarray_create.H5Tarray_create " + err);
+        }
+        assertTrue("testH5Tget_array_dims:H5Tarray_create", filetype_id >= 0);
+        try {
+            ndims = H5.H5Tget_array_dims(filetype_id, rdims);
+            assertTrue("testH5Tget_array_dims", ndims == 2);
+            assertTrue("testH5Tget_array_dims", adims[0] == rdims[0]);
+            assertTrue("testH5Tget_array_dims", adims[1] == rdims[1]);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tget_array_dims.H5Tget_array_dims " + err);
+        }
+        finally {
+            if (filetype_id >= 0)
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
+        }
     }
 
     @Test
-    public void testH5Tenum_functions() {
-        long       filetype_id = HDF5Constants.H5I_INVALID_HID;
-        String    enum_type ="Enum_type";
-        byte[]    enum_val = new byte[1];
-        String    enum_name = null;
+    public void testH5Tenum_functions()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
+        String enum_type = "Enum_type";
+        byte[] enum_val  = new byte[1];
+        String enum_name = null;
 
         // Create a enumerate datatype
         try {
@@ -221,15 +258,15 @@ public class TestH5T {
         }
         assertTrue("testH5Tenum_functions:H5Tcreate", filetype_id >= 0);
         try {
-            enum_val[0]=10;
+            enum_val[0] = 10;
             H5.H5Tenum_insert(filetype_id, "RED", enum_val);
-            enum_val[0]=11;
+            enum_val[0] = 11;
             H5.H5Tenum_insert(filetype_id, "GREEN", enum_val);
-            enum_val[0]=12;
+            enum_val[0] = 12;
             H5.H5Tenum_insert(filetype_id, "BLUE", enum_val);
-            enum_val[0]=13;
+            enum_val[0] = 13;
             H5.H5Tenum_insert(filetype_id, "ORANGE", enum_val);
-            enum_val[0]=14;
+            enum_val[0] = 14;
             H5.H5Tenum_insert(filetype_id, "YELLOW", enum_val);
 
             // Query member number and member index by member name, for enumeration type.
@@ -237,7 +274,8 @@ public class TestH5T {
             assertTrue("Can't get correct index number", H5.H5Tget_member_index(filetype_id, "ORANGE") == 3);
 
             // Commit enumeration datatype and close it */
-            H5.H5Tcommit(H5fid, enum_type, filetype_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+            H5.H5Tcommit(H5fid, enum_type, filetype_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+                         HDF5Constants.H5P_DEFAULT);
 
             H5.H5Tclose(filetype_id);
 
@@ -250,17 +288,17 @@ public class TestH5T {
             assertTrue("Can't get correct index number", H5.H5Tget_member_index(filetype_id, "ORANGE") == 3);
 
             // Query member value by member name, for enumeration type
-            H5.H5Tenum_valueof (filetype_id, "ORANGE", enum_val);
-            assertTrue("Incorrect value for enum member", enum_val[0]==13);
+            H5.H5Tenum_valueof(filetype_id, "ORANGE", enum_val);
+            assertTrue("Incorrect value for enum member", enum_val[0] == 13);
 
             // Query member value by member index, for enumeration type
-            H5.H5Tget_member_value (filetype_id, 2, enum_val);
-            assertTrue("Incorrect value for enum member", enum_val[0]==12);
+            H5.H5Tget_member_value(filetype_id, 2, enum_val);
+            assertTrue("Incorrect value for enum member", enum_val[0] == 12);
 
             // Query member name by member value, for enumeration type
             enum_val[0] = 14;
-            enum_name = H5.H5Tenum_nameof(filetype_id, enum_val, 16);
-            assertTrue("Incorrect name for enum member", enum_name.compareTo("YELLOW")==0);
+            enum_name   = H5.H5Tenum_nameof(filetype_id, enum_val, 16);
+            assertTrue("Incorrect name for enum member", enum_name.compareTo("YELLOW") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -268,14 +306,19 @@ public class TestH5T {
         }
         finally {
             if (filetype_id >= 0)
-                try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Tenum_create_functions() {
-        long      filetype_id = HDF5Constants.H5I_INVALID_HID;
-        byte[]    enum_val = new byte[1];
+    public void testH5Tenum_create_functions()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
+        byte[] enum_val  = new byte[1];
 
         // Create a enumerate datatype
         try {
@@ -287,15 +330,15 @@ public class TestH5T {
         }
         assertTrue("testH5Tenum_create_functions:H5Tcreate", filetype_id >= 0);
         try {
-            enum_val[0]=10;
+            enum_val[0] = 10;
             H5.H5Tenum_insert(filetype_id, "RED", enum_val);
-            enum_val[0]=11;
+            enum_val[0] = 11;
             H5.H5Tenum_insert(filetype_id, "GREEN", enum_val);
-            enum_val[0]=12;
+            enum_val[0] = 12;
             H5.H5Tenum_insert(filetype_id, "BLUE", enum_val);
-            enum_val[0]=13;
+            enum_val[0] = 13;
             H5.H5Tenum_insert(filetype_id, "ORANGE", enum_val);
-            enum_val[0]=14;
+            enum_val[0] = 14;
             H5.H5Tenum_insert(filetype_id, "YELLOW", enum_val);
 
             // Query member number and member index by member name, for enumeration type.
@@ -308,14 +351,19 @@ public class TestH5T {
         }
         finally {
             if (filetype_id >= 0)
-                try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Topaque_functions() {
-        long       filetype_id = HDF5Constants.H5I_INVALID_HID;
-        String    opaque_name = null;
+    public void testH5Topaque_functions()
+    {
+        long filetype_id   = HDF5Constants.H5I_INVALID_HID;
+        String opaque_name = null;
 
         // Create a opaque datatype
         try {
@@ -330,7 +378,7 @@ public class TestH5T {
         try {
             H5.H5Tset_tag(filetype_id, "opaque type");
             opaque_name = H5.H5Tget_tag(filetype_id);
-            assertTrue("Incorrect tag for opaque type", opaque_name.compareTo("opaque type")==0);
+            assertTrue("Incorrect tag for opaque type", opaque_name.compareTo("opaque type") == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -338,67 +386,83 @@ public class TestH5T {
         }
         finally {
             if (filetype_id >= 0)
-                try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Tvlen_create() {
+    public void testH5Tvlen_create()
+    {
         long filetype_id = HDF5Constants.H5I_INVALID_HID;
 
-       try {
-           filetype_id = H5.H5Tvlen_create(HDF5Constants.H5T_C_S1);
-           assertTrue("testH5Tvlen_create", filetype_id >= 0);
-
-           // Check if datatype is VL type
-           int vlclass = H5.H5Tget_class(filetype_id);
-           assertTrue("testH5Tvlen_create:H5Tget_class", vlclass == HDF5Constants.H5T_VLEN);
-           assertFalse("testH5Tis_variable_str:H5Tget_class", vlclass == HDF5Constants.H5T_STRING);
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tvlen_create.H5Tvlen_create " + err);
-       }
-       finally {
-           if (filetype_id >= 0)
-               try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
-       }
+        try {
+            filetype_id = H5.H5Tvlen_create(HDF5Constants.H5T_C_S1);
+            assertTrue("testH5Tvlen_create", filetype_id >= 0);
+
+            // Check if datatype is VL type
+            int vlclass = H5.H5Tget_class(filetype_id);
+            assertTrue("testH5Tvlen_create:H5Tget_class", vlclass == HDF5Constants.H5T_VLEN);
+            assertFalse("testH5Tis_variable_str:H5Tget_class", vlclass == HDF5Constants.H5T_STRING);
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tvlen_create.H5Tvlen_create " + err);
+        }
+        finally {
+            if (filetype_id >= 0)
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
+        }
     }
 
     @Test
-    public void testH5Tis_variable_str() {
-       long filetype_id = HDF5Constants.H5I_INVALID_HID;
-
-       try {
-           filetype_id = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
-           assertTrue("testH5Tis_variable_str.H5Tcopy: ", filetype_id >= 0);
-
-           // Convert to variable-length string
-           H5.H5Tset_size(filetype_id, HDF5Constants.H5T_VARIABLE);
-
-           // Check if datatype is VL string
-           int vlclass = H5.H5Tget_class(filetype_id);
-           assertTrue("testH5Tis_variable_str:H5Tget_class", vlclass == HDF5Constants.H5T_STRING);
-           assertFalse("testH5Tvlen_create:H5Tget_class", vlclass == HDF5Constants.H5T_VLEN);
-
-           assertTrue("testH5Tis_variable_str:H5Tis_variable_str", H5.H5Tis_variable_str(filetype_id));
-
-           // Verify that the class detects as a string
-           assertTrue("testH5Tis_variable_str:H5Tdetect_class", H5.H5Tdetect_class(filetype_id, HDF5Constants.H5T_STRING));
-       }
-       catch (Throwable err) {
-           err.printStackTrace();
-           fail("testH5Tis_variable_str " + err);
-       }
-       finally {
-           if (filetype_id >= 0)
-               try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
-       }
+    public void testH5Tis_variable_str()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
+
+        try {
+            filetype_id = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
+            assertTrue("testH5Tis_variable_str.H5Tcopy: ", filetype_id >= 0);
+
+            // Convert to variable-length string
+            H5.H5Tset_size(filetype_id, HDF5Constants.H5T_VARIABLE);
+
+            // Check if datatype is VL string
+            int vlclass = H5.H5Tget_class(filetype_id);
+            assertTrue("testH5Tis_variable_str:H5Tget_class", vlclass == HDF5Constants.H5T_STRING);
+            assertFalse("testH5Tvlen_create:H5Tget_class", vlclass == HDF5Constants.H5T_VLEN);
+
+            assertTrue("testH5Tis_variable_str:H5Tis_variable_str", H5.H5Tis_variable_str(filetype_id));
+
+            // Verify that the class detects as a string
+            assertTrue("testH5Tis_variable_str:H5Tdetect_class",
+                       H5.H5Tdetect_class(filetype_id, HDF5Constants.H5T_STRING));
+        }
+        catch (Throwable err) {
+            err.printStackTrace();
+            fail("testH5Tis_variable_str " + err);
+        }
+        finally {
+            if (filetype_id >= 0)
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
+        }
     }
 
     @Test
-    public void testH5Tcompound_functions() {
-        long       filetype_id = HDF5Constants.H5I_INVALID_HID;
+    public void testH5Tcompound_functions()
+    {
+        long filetype_id = HDF5Constants.H5I_INVALID_HID;
 
         // Create a compound datatype
         try {
@@ -420,28 +484,34 @@ public class TestH5T {
             // We started to support this function for compound type in 1.8.6 release.
             int order = H5.H5Tget_order(filetype_id);
             assertFalse("Can't get order for compound type.", order == HDF5Constants.H5T_ORDER_ERROR);
-            assertTrue("Wrong order for this type.", (order == HDF5Constants.H5T_ORDER_LE) || (order == HDF5Constants.H5T_ORDER_BE));
+            assertTrue("Wrong order for this type.",
+                       (order == HDF5Constants.H5T_ORDER_LE) || (order == HDF5Constants.H5T_ORDER_BE));
 
             // Make certain that the correct classes can be detected
-            assertTrue("Can't get correct class", H5.H5Tdetect_class(filetype_id, HDF5Constants.H5T_COMPOUND));
+            assertTrue("Can't get correct class",
+                       H5.H5Tdetect_class(filetype_id, HDF5Constants.H5T_COMPOUND));
             assertTrue("Can't get correct class", H5.H5Tdetect_class(filetype_id, HDF5Constants.H5T_FLOAT));
             // Make certain that an incorrect class is not detected
             assertFalse("Can get incorrect class", H5.H5Tdetect_class(filetype_id, HDF5Constants.H5T_TIME));
 
             // Query member name by member index
-            String index_name = H5.H5Tget_member_name (filetype_id, 0);
-            assertTrue("Incorrect name for member index", index_name.compareTo("Lon")==0);
+            String index_name = H5.H5Tget_member_name(filetype_id, 0);
+            assertTrue("Incorrect name for member index", index_name.compareTo("Lon") == 0);
 
             // Query member offset by member no
-            long index_offset = H5.H5Tget_member_offset (filetype_id, 1);
+            long index_offset = H5.H5Tget_member_offset(filetype_id, 1);
             assertTrue("Incorrect offset for member no", index_offset == 8);
 
             // Query member type by member index
-            long index_type = H5.H5Tget_member_type (filetype_id, 0);
-            assertTrue("Incorrect type for member index", H5.H5Tequal(HDF5Constants.H5T_NATIVE_DOUBLE, index_type));
+            long index_type = H5.H5Tget_member_type(filetype_id, 0);
+            assertTrue("Incorrect type for member index",
+                       H5.H5Tequal(HDF5Constants.H5T_NATIVE_DOUBLE, index_type));
             if (index_type >= 0)
-                try {H5.H5Tclose(index_type);} catch (Exception ex) {}
-
+                try {
+                    H5.H5Tclose(index_type);
+                }
+                catch (Exception ex) {
+                }
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -449,8 +519,11 @@ public class TestH5T {
         }
         finally {
             if (filetype_id >= 0)
-                try {H5.H5Tclose(filetype_id);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(filetype_id);
+                }
+                catch (Exception ex) {
+                }
         }
     }
-
 }
diff --git a/java/test/TestH5Tbasic.java b/java/test/TestH5Tbasic.java
index 7aac2ab..8fb1e58 100644
--- a/java/test/TestH5Tbasic.java
+++ b/java/test/TestH5Tbasic.java
@@ -15,6 +15,7 @@ package test;
 import static org.junit.Assert.assertFalse;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 
@@ -25,24 +26,28 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Tbasic {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test
-    public void testH5Tcopy() {
+    public void testH5Tcopy()
+    {
         long H5strdid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5strdid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
-            assertTrue("H5.H5Tcopy",H5strdid > 0);
+            assertTrue("H5.H5Tcopy", H5strdid > 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -50,18 +55,23 @@ public class TestH5Tbasic {
         }
         finally {
             if (H5strdid >= 0)
-                try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(H5strdid);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Tequal() {
+    public void testH5Tequal()
+    {
         long H5strdid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5strdid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
-            assertTrue("H5.H5Tcopy",H5strdid > 0);
+            assertTrue("H5.H5Tcopy", H5strdid > 0);
             boolean teq = H5.H5Tequal(HDF5Constants.H5T_C_S1, H5strdid);
-            assertTrue("H5.H5Tequal",teq);
+            assertTrue("H5.H5Tequal", teq);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -69,18 +79,23 @@ public class TestH5Tbasic {
         }
         finally {
             if (H5strdid >= 0)
-                try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(H5strdid);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Tequal_not() {
+    public void testH5Tequal_not()
+    {
         long H5strdid = HDF5Constants.H5I_INVALID_HID;
         try {
             H5strdid = H5.H5Tcopy(HDF5Constants.H5T_STD_U64LE);
-            assertTrue("H5.H5Tcopy",H5strdid > 0);
+            assertTrue("H5.H5Tcopy", H5strdid > 0);
             boolean teq = H5.H5Tequal(HDF5Constants.H5T_IEEE_F32BE, H5strdid);
-            assertFalse("H5.H5Tequal",teq);
+            assertFalse("H5.H5Tequal", teq);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -88,22 +103,27 @@ public class TestH5Tbasic {
         }
         finally {
             if (H5strdid >= 0)
-                try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(H5strdid);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 
     @Test
-    public void testH5Tconvert() {
-        String[] strs = {"a1234","b1234"};
-        int srcLen = 5;
-        int dstLen = 10;
-        long srcId = HDF5Constants.H5I_INVALID_HID;
-        long dstId = HDF5Constants.H5I_INVALID_HID;
-        int dimSize = strs.length;
-        byte[]   buf = new byte[dimSize*dstLen];
-
-        for (int i=0; i 0);
+            assertTrue("H5.H5Tcopy", H5strdid > 0);
             H5.H5Tset_size(H5strdid, (long)5);
             assertTrue(HDF5Constants.H5T_ORDER_NONE == H5.H5Tget_order(H5strdid));
             H5.H5Tset_order(H5strdid, HDF5Constants.H5T_ORDER_NONE);
@@ -152,7 +181,11 @@ public class TestH5Tbasic {
         }
         finally {
             if (H5strdid >= 0)
-                try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
+                try {
+                    H5.H5Tclose(H5strdid);
+                }
+                catch (Exception ex) {
+                }
         }
     }
 }
diff --git a/java/test/TestH5Tparams.java b/java/test/TestH5Tparams.java
index 92a034c..a1710af 100644
--- a/java/test/TestH5Tparams.java
+++ b/java/test/TestH5Tparams.java
@@ -13,6 +13,7 @@
 package test;
 
 import static org.junit.Assert.assertTrue;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
@@ -23,385 +24,459 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Tparams {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
-    @Test//(expected = HDF5LibraryException.class)
-    public void testH5Tclose_invalid() throws Throwable {
+    @Test //(expected = HDF5LibraryException.class)
+    public void testH5Tclose_invalid() throws Throwable
+    {
         long tid = H5.H5Tclose(-1);
         assertTrue(tid == 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tcopy_invalid() throws Throwable {
+    public void testH5Tcopy_invalid() throws Throwable
+    {
         H5.H5Tcopy(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tequal_invalid() throws Throwable {
+    public void testH5Tequal_invalid() throws Throwable
+    {
         H5.H5Tequal(-1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tlock_invalid() throws Throwable {
+    public void testH5Tlock_invalid() throws Throwable
+    {
         H5.H5Tlock(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_class_invalid() throws Throwable {
+    public void testH5Tget_class_invalid() throws Throwable
+    {
         H5.H5Tget_class(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_size_invalid() throws Throwable {
+    public void testH5Tget_size_invalid() throws Throwable
+    {
         H5.H5Tget_size(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_size_invalid() throws Throwable {
+    public void testH5Tset_size_invalid() throws Throwable
+    {
         H5.H5Tset_size(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_order_invalid() throws Throwable {
+    public void testH5Tget_order_invalid() throws Throwable
+    {
         H5.H5Tget_order(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_order_invalid() throws Throwable {
+    public void testH5Tset_order_invalid() throws Throwable
+    {
         H5.H5Tset_order(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_precision_invalid() throws Throwable {
+    public void testH5Tget_precision_invalid() throws Throwable
+    {
         H5.H5Tget_precision(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_precision_long_invalid() throws Throwable {
+    public void testH5Tget_precision_long_invalid() throws Throwable
+    {
         H5.H5Tget_precision_long(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_precision_invalid() throws Throwable {
+    public void testH5Tset_precision_invalid() throws Throwable
+    {
         H5.H5Tset_precision(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_offset_invalid() throws Throwable {
+    public void testH5Tget_offset_invalid() throws Throwable
+    {
         H5.H5Tget_offset(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_offset_invalid() throws Throwable {
+    public void testH5Tset_offset_invalid() throws Throwable
+    {
         H5.H5Tset_offset(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tcreate_invalid() throws Throwable {
+    public void testH5Tcreate_invalid() throws Throwable
+    {
         H5.H5Tcreate(-1, (long)0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Topen_null() throws Throwable {
+    public void testH5Topen_null() throws Throwable
+    {
         H5.H5Topen(-1, null, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Topen_invalid() throws Throwable {
+    public void testH5Topen_invalid() throws Throwable
+    {
         H5.H5Topen(-1, "Bogus", 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tcommit_null() throws Throwable {
+    public void testH5Tcommit_null() throws Throwable
+    {
         H5.H5Tcommit(-1, null, 0, -1, -1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tcommit_invalid() throws Throwable {
+    public void testH5Tcommit_invalid() throws Throwable
+    {
         H5.H5Tcommit(-1, "Bogus", -1, -1, -1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tget_pad_null() throws Throwable {
+    public void testH5Tget_pad_null() throws Throwable
+    {
         H5.H5Tget_pad(-1, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_pad_invalid() throws Throwable {
+    public void testH5Tget_pad_invalid() throws Throwable
+    {
         int[] pad = new int[2];
         H5.H5Tget_pad(-1, pad);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_pad_invalid() throws Throwable {
+    public void testH5Tset_pad_invalid() throws Throwable
+    {
         H5.H5Tset_pad(-1, -1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_sign_invalid() throws Throwable {
+    public void testH5Tget_sign_invalid() throws Throwable
+    {
         H5.H5Tget_sign(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_sign_invalid() throws Throwable {
+    public void testH5Tset_sign_invalid() throws Throwable
+    {
         H5.H5Tset_sign(-1, 0);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tget_fields_null() throws Throwable {
+    public void testH5Tget_fields_null() throws Throwable
+    {
         H5.H5Tget_fields(-1, (long[])null);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Tget_fields_length_invalid() throws Throwable {
+    public void testH5Tget_fields_length_invalid() throws Throwable
+    {
         long[] fields = new long[2];
         H5.H5Tget_fields(-1, fields);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_fields_invalid() throws Throwable {
+    public void testH5Tget_fields_invalid() throws Throwable
+    {
         long[] fields = new long[5];
         H5.H5Tget_fields(-1, fields);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_fields_invalid() throws Throwable {
+    public void testH5Tset_fields_invalid() throws Throwable
+    {
         H5.H5Tset_fields(-1, -1, -1, -1, -1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_ebias_invalid() throws Throwable {
+    public void testH5Tget_ebias_invalid() throws Throwable
+    {
         H5.H5Tget_ebias(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_ebias_long_invalid() throws Throwable {
+    public void testH5Tget_ebias_long_invalid() throws Throwable
+    {
         H5.H5Tget_ebias_long(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_ebias_invalid() throws Throwable {
+    public void testH5Tset_ebias_invalid() throws Throwable
+    {
         H5.H5Tset_ebias(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_norm_invalid() throws Throwable {
+    public void testH5Tget_norm_invalid() throws Throwable
+    {
         H5.H5Tget_norm(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_norm_invalid() throws Throwable {
+    public void testH5Tset_norm_invalid() throws Throwable
+    {
         H5.H5Tset_norm(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_inpad_invalid() throws Throwable {
+    public void testH5Tget_inpad_invalid() throws Throwable
+    {
         H5.H5Tget_inpad(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_inpad_invalid() throws Throwable {
+    public void testH5Tset_inpad_invalid() throws Throwable
+    {
         H5.H5Tset_inpad(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_cset_invalid() throws Throwable {
+    public void testH5Tget_cset_invalid() throws Throwable
+    {
         H5.H5Tget_cset(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_cset_invalid() throws Throwable {
+    public void testH5Tset_cset_invalid() throws Throwable
+    {
         H5.H5Tset_cset(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_strpad_invalid() throws Throwable {
+    public void testH5Tget_strpad_invalid() throws Throwable
+    {
         H5.H5Tget_strpad(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_strpad_invalid() throws Throwable {
+    public void testH5Tset_strpad_invalid() throws Throwable
+    {
         H5.H5Tset_strpad(-1, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_nmembers_invalid() throws Throwable {
+    public void testH5Tget_nmembers_invalid() throws Throwable
+    {
         H5.H5Tget_nmembers(-1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tget_member_index_null() throws Throwable {
+    public void testH5Tget_member_index_null() throws Throwable
+    {
         H5.H5Tget_member_index(-1, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_member_index_invalid() throws Throwable {
+    public void testH5Tget_member_index_invalid() throws Throwable
+    {
         H5.H5Tget_member_index(-1, "Bogus");
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_member_type_invalid() throws Throwable {
+    public void testH5Tget_member_type_invalid() throws Throwable
+    {
         H5.H5Tget_member_type(-1, -1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_member_class_invalid() throws Throwable {
+    public void testH5Tget_member_class_invalid() throws Throwable
+    {
         H5.H5Tget_member_class(-1, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tinsert_null() throws Throwable {
+    public void testH5Tinsert_null() throws Throwable
+    {
         H5.H5Tinsert(-1, null, 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tinsert_invalid() throws Throwable {
+    public void testH5Tinsert_invalid() throws Throwable
+    {
         H5.H5Tinsert(-1, "Bogus", 0, 0);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tpack_invalid() throws Throwable {
+    public void testH5Tpack_invalid() throws Throwable
+    {
         H5.H5Tpack(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Treclaim_invalid() throws Throwable {
+    public void testH5Treclaim_invalid() throws Throwable
+    {
         byte[] buf = new byte[2];
         H5.H5Treclaim(-1, -1, -1, buf);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Treclaim_null() throws Throwable {
+    public void testH5Treclaim_null() throws Throwable
+    {
         H5.H5Treclaim(-1, -1, -1, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tvlen_create_invalid() throws Throwable {
+    public void testH5Tvlen_create_invalid() throws Throwable
+    {
         H5.H5Tvlen_create(-1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tset_tag_null() throws Throwable {
+    public void testH5Tset_tag_null() throws Throwable
+    {
         H5.H5Tset_tag(-1, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tset_tag_invalid() throws Throwable {
+    public void testH5Tset_tag_invalid() throws Throwable
+    {
         H5.H5Tset_tag(-1, "Bogus");
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_super_invalid() throws Throwable {
+    public void testH5Tget_super_invalid() throws Throwable
+    {
         H5.H5Tget_super(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tenum_create_invalid() throws Throwable {
+    public void testH5Tenum_create_invalid() throws Throwable
+    {
         H5.H5Tenum_create(-1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tenum_insert_name_null() throws Throwable {
+    public void testH5Tenum_insert_name_null() throws Throwable
+    {
         H5.H5Tenum_insert(-1, null, (byte[])null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tenum_insert_null() throws Throwable {
+    public void testH5Tenum_insert_null() throws Throwable
+    {
         H5.H5Tenum_insert(-1, "bogus", (byte[])null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tenum_insert_invalid() throws Throwable {
+    public void testH5Tenum_insert_invalid() throws Throwable
+    {
         byte[] enumtype = new byte[2];
         H5.H5Tenum_insert(-1, "bogus", enumtype);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Tenum_nameof_invalid_size() throws Throwable {
+    public void testH5Tenum_nameof_invalid_size() throws Throwable
+    {
         H5.H5Tenum_nameof(-1, null, -1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tenum_nameof_value_null() throws Throwable {
+    public void testH5Tenum_nameof_value_null() throws Throwable
+    {
         H5.H5Tenum_nameof(-1, null, 1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tenum_nameof_invalid() throws Throwable {
+    public void testH5Tenum_nameof_invalid() throws Throwable
+    {
         byte[] btype = new byte[2];
         H5.H5Tenum_nameof(-1, btype, 1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tenum_valueof_name_null() throws Throwable {
+    public void testH5Tenum_valueof_name_null() throws Throwable
+    {
         H5.H5Tenum_valueof(-1, null, (byte[])null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tenum_valueof_null() throws Throwable {
+    public void testH5Tenum_valueof_null() throws Throwable
+    {
         H5.H5Tenum_valueof(-1, "bogus", (byte[])null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tenum_valueof_invalid() throws Throwable {
+    public void testH5Tenum_valueof_invalid() throws Throwable
+    {
         byte[] btype = new byte[2];
         H5.H5Tenum_valueof(-1, "bogus", btype);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tget_member_value_null() throws Throwable {
+    public void testH5Tget_member_value_null() throws Throwable
+    {
         H5.H5Tget_member_value(-1, -1, (byte[])null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_member_value_invalid() throws Throwable {
+    public void testH5Tget_member_value_invalid() throws Throwable
+    {
         byte[] btype = new byte[2];
         H5.H5Tget_member_value(-1, -1, btype);
     }
 
     @Test(expected = IllegalArgumentException.class)
-    public void testH5Tarray_create_invalid() throws Throwable {
+    public void testH5Tarray_create_invalid() throws Throwable
+    {
         H5.H5Tarray_create(-1, -1, null);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tarray_create_value_null() throws Throwable {
+    public void testH5Tarray_create_value_null() throws Throwable
+    {
         H5.H5Tarray_create(-1, 1, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_array_ndims_invalid() throws Throwable {
+    public void testH5Tget_array_ndims_invalid() throws Throwable
+    {
         H5.H5Tget_array_ndims(-1);
     }
 
     @Test(expected = NullPointerException.class)
-    public void testH5Tget_array_dims_null() throws Throwable {
+    public void testH5Tget_array_dims_null() throws Throwable
+    {
         H5.H5Tget_array_dims(-1, null);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tget_native_type_invalid() throws Throwable {
+    public void testH5Tget_native_type_invalid() throws Throwable
+    {
         H5.H5Tget_native_type(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Tflush_invalid() throws Throwable {
+    public void testH5Tflush_invalid() throws Throwable
+    {
         H5.H5Tflush(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Trefresh_invalid() throws Throwable {
+    public void testH5Trefresh_invalid() throws Throwable
+    {
         H5.H5Trefresh(-1);
     }
-
 }
diff --git a/java/test/TestH5VL.java b/java/test/TestH5VL.java
index 4253d20..99505ae 100644
--- a/java/test/TestH5VL.java
+++ b/java/test/TestH5VL.java
@@ -16,12 +16,13 @@ import static org.junit.Assert.assertEquals;
 import static org.junit.Assert.assertFalse;
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
+import java.io.File;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
 
-import java.io.File;
-
 import org.junit.After;
 import org.junit.Before;
 import org.junit.Rule;
@@ -29,28 +30,37 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5VL {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
-    private final void _deleteFile(String filename) {
+    private final void _deleteFile(String filename)
+    {
         File file = new File(filename);
 
         if (file.exists()) {
-            try {file.delete();} catch (SecurityException e) {}
+            try {
+                file.delete();
+            }
+            catch (SecurityException e) {
+            }
         }
     }
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test
-    public void testH5VLnative_init() {
+    public void testH5VLnative_init()
+    {
         try {
             boolean is_registered;
 
@@ -70,11 +80,12 @@ public class TestH5VL {
     }
 
     @Test
-    public void testH5VLget_connector_id() {
+    public void testH5VLget_connector_id()
+    {
         String H5_FILE = "testFvl.h5";
 
-        long H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        long H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                  HDF5Constants.H5P_DEFAULT);
 
         try {
             long native_id = H5.H5VLget_connector_id(H5fid);
@@ -95,14 +106,19 @@ public class TestH5VL {
         }
         finally {
             if (H5fid > 0) {
-                try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+                try {
+                    H5.H5Fclose(H5fid);
+                }
+                catch (Exception ex) {
+                }
             }
             _deleteFile(H5_FILE);
         }
     }
 
     @Test
-    public void testH5VLget_connector_id_by_name() {
+    public void testH5VLget_connector_id_by_name()
+    {
         try {
             long native_id = H5.H5VLget_connector_id_by_name(HDF5Constants.H5VL_NATIVE_NAME);
             assertTrue("H5.H5VLget_connector_id_by_name H5VL_NATIVE_NAME", native_id >= 0);
@@ -115,7 +131,8 @@ public class TestH5VL {
     }
 
     @Test
-    public void testH5VLget_connector_id_by_value() {
+    public void testH5VLget_connector_id_by_value()
+    {
         try {
             long native_id = H5.H5VLget_connector_id_by_value(HDF5Constants.H5VL_NATIVE_VALUE);
             assertTrue("H5.H5VLget_connector_id_by_value H5VL_NATIVE_VALUE", native_id >= 0);
@@ -128,11 +145,12 @@ public class TestH5VL {
     }
 
     @Test
-    public void testH5VLget_connector_name() {
+    public void testH5VLget_connector_name()
+    {
         String H5_FILE = "testFvl.h5";
 
-        long H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
-                HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+        long H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+                                  HDF5Constants.H5P_DEFAULT);
         H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
 
         try {
@@ -145,7 +163,8 @@ public class TestH5VL {
              */
             String connector = System.getenv("HDF5_VOL_CONNECTOR");
             if (connector == null)
-                assertTrue("H5.H5VLget_connector_name H5VL_NATIVE", native_name.compareToIgnoreCase(HDF5Constants.H5VL_NATIVE_NAME)==0);
+                assertTrue("H5.H5VLget_connector_name H5VL_NATIVE",
+                           native_name.compareToIgnoreCase(HDF5Constants.H5VL_NATIVE_NAME) == 0);
         }
         catch (Throwable err) {
             err.printStackTrace();
@@ -153,20 +172,25 @@ public class TestH5VL {
         }
         finally {
             if (H5fid > 0) {
-                try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+                try {
+                    H5.H5Fclose(H5fid);
+                }
+                catch (Exception ex) {
+                }
             }
             _deleteFile(H5_FILE);
         }
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5VLclose_NegativeID() throws Throwable {
+    public void testH5VLclose_NegativeID() throws Throwable
+    {
         H5.H5VLclose(-1);
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5VLunregister_connector_NegativeID() throws Throwable {
+    public void testH5VLunregister_connector_NegativeID() throws Throwable
+    {
         H5.H5VLunregister_connector(-1);
     }
 }
-
diff --git a/java/test/TestH5Z.java b/java/test/TestH5Z.java
index fde8f1a..bc6bfc0 100644
--- a/java/test/TestH5Z.java
+++ b/java/test/TestH5Z.java
@@ -14,6 +14,7 @@ package test;
 
 import static org.junit.Assert.assertTrue;
 import static org.junit.Assert.fail;
+
 import hdf.hdf5lib.H5;
 import hdf.hdf5lib.HDF5Constants;
 import hdf.hdf5lib.exceptions.HDF5LibraryException;
@@ -25,20 +26,24 @@ import org.junit.Test;
 import org.junit.rules.TestName;
 
 public class TestH5Z {
-    @Rule public TestName testname = new TestName();
+    @Rule
+    public TestName testname = new TestName();
 
     @Before
-    public void checkOpenIDs() {
-        assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+    public void checkOpenIDs()
+    {
+        assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
         System.out.print(testname.getMethodName());
     }
     @After
-    public void nextTestName() {
+    public void nextTestName()
+    {
         System.out.println();
     }
 
     @Test
-    public void testH5Zfilter_avail() {
+    public void testH5Zfilter_avail()
+    {
         try {
             int filter_found;
 
@@ -64,34 +69,46 @@ public class TestH5Z {
     }
 
     @Test
-    public void testH5Zget_filter_info() {
+    public void testH5Zget_filter_info()
+    {
         try {
             int filter_flag;
 
             filter_flag = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_FLETCHER32);
-            assertTrue("H5.H5Zget_filter_info_FLETCHER32_DECODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
-            assertTrue("H5.H5Zget_filter_info_FLETCHER32_ENCODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_FLETCHER32_DECODE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_FLETCHER32_ENCODE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
             filter_flag = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_NBIT);
-            assertTrue("H5.H5Zget_filter_info_NBIT_DECODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
-            assertTrue("H5.H5Zget_filter_info_NBIT_ENCODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_NBIT_DECODE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_NBIT_ENCODE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
             filter_flag = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SCALEOFFSET);
-            assertTrue("H5.H5Zget_filter_info_SCALEOFFSET_DECODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
-            assertTrue("H5.H5Zget_filter_info_SCALEOFFSET_ENCODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_SCALEOFFSET_DECODE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_SCALEOFFSET_ENCODE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
             filter_flag = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SHUFFLE);
-            assertTrue("H5.H5Zget_filter_info_DECODE_SHUFFLE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
-            assertTrue("H5.H5Zget_filter_info_ENCODE_SHUFFLE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_DECODE_SHUFFLE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
+            assertTrue("H5.H5Zget_filter_info_ENCODE_SHUFFLE_ENABLED",
+                       (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
 
-            if(1 == H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_DEFLATE)) {
+            if (1 == H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_DEFLATE)) {
                 filter_flag = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_DEFLATE);
-                assertTrue("H5.H5Zget_filter_info_DEFLATE_DECODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
-                assertTrue("H5.H5Zget_filter_info_DEFLATE_ENCODE_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
+                assertTrue("H5.H5Zget_filter_info_DEFLATE_DECODE_ENABLED",
+                           (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
+                assertTrue("H5.H5Zget_filter_info_DEFLATE_ENCODE_ENABLED",
+                           (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) > 0);
             }
 
-            if(1 == H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SZIP)) {
+            if (1 == H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SZIP)) {
                 filter_flag = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SZIP);
                 // Decode should always be available, but we have no way of determining
                 // if encode is so don't assert on that.
-                assertTrue("H5.H5Zget_filter_info_DECODE_SZIP_ENABLED", (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
+                assertTrue("H5.H5Zget_filter_info_DECODE_SZIP_ENABLED",
+                           (filter_flag & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) > 0);
             }
         }
         catch (Throwable err) {
@@ -101,7 +118,8 @@ public class TestH5Z {
     }
 
     @Test(expected = HDF5LibraryException.class)
-    public void testH5Zunregister_predefined() throws Throwable {
+    public void testH5Zunregister_predefined() throws Throwable
+    {
         int filter_found = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SHUFFLE);
         assertTrue("H5.H5Zfilter_avail", filter_found > 0);
 
diff --git a/java/test/junit.sh.in b/java/test/junit.sh.in
index ca2b3a9..4e5152b 100644
--- a/java/test/junit.sh.in
+++ b/java/test/junit.sh.in
@@ -31,6 +31,7 @@ CMP='cmp'
 DIFF='diff -c'
 CP='cp'
 DIRNAME='dirname'
+BASENAME='basename'
 LS='ls'
 AWK='awk'
 
@@ -141,17 +142,21 @@ COPY_LIBFILES_TO_BLDLIBDIR()
             INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
             INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
             if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
-                $CP -f $tstfile $BLDLIBDIR
+                $CP -fR $tstfile $BLDLIBDIR
                 if [ $? -ne 0 ]; then
                     echo "Error: FAILED to copy $tstfile ."
 
                     # Comment out this to CREATE expected file
                     exit $EXIT_FAILURE
                 fi
+                BNAME=`$BASENAME $tstfile`
+                if [ "$BNAME" = "libhdf5_java.dylib" ]; then
+                    COPIED_LIBHDF5_JAVA=1
+                fi
             fi
         fi
     done
-    if [ "$IS_DARWIN" = "yes" ]; then
+    if [[ "$IS_DARWIN" = "yes" ]] && [[ $COPIED_LIBHDF5_JAVA -eq 1 ]]; then
        (cd testlibs; \
          install_name_tool -add_rpath @loader_path libhdf5_java.dylib; \
          exist_path=` otool -l libhdf5_java.dylib | grep libhdf5 | grep -v java | awk '{print $2}'`; \
@@ -172,7 +177,7 @@ COPY_LIBFILES_TO_BLDLIBDIR()
             INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
             INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
             if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
-                $CP -f $tstfile $BLDLIBDIR
+                $CP -fR $tstfile $BLDLIBDIR
                 if [ $? -ne 0 ]; then
                     echo "Error: FAILED to copy $tstfile ."
 
@@ -195,7 +200,7 @@ COPY_LIBFILES_TO_BLDLIBDIR()
             INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
             INODE_DDIR=`$LS -i -d $BLDLIBDIR | $AWK -F' ' '{print $1}'`
             if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
-                $CP -f $tstfile $BLDLIBDIR
+                $CP -fR $tstfile $BLDLIBDIR
                 if [ $? -ne 0 ]; then
                     echo "Error: FAILED to copy $tstfile ."
 
diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt
index 5e488be..b0d9bc8 100644
--- a/release_docs/RELEASE.txt
+++ b/release_docs/RELEASE.txt
@@ -151,7 +151,12 @@ Bug Fixes since HDF5-1.13.1 release
 
     Fortran API
     -----------
-    - 
+    - h5open_f and h5close_f fixes
+     * Fixed it so both h5open_f and h5close_f can be called multiple times.
+     * Fixed an issue with open objects remaining after h5close_f was called.
+     * Added additional tests.
+       (MSB, 2022/04/19, HDFFV-11306)
+
 
 
     High-Level Library
diff --git a/src/H5.c b/src/H5.c
index 7142234..3078140 100644
--- a/src/H5.c
+++ b/src/H5.c
@@ -229,7 +229,7 @@ H5_init_library(void)
      * Install atexit() library cleanup routines unless the H5dont_atexit()
      * has been called.  Once we add something to the atexit() list it stays
      * there permanently, so we set H5_dont_atexit_g after we add it to prevent
-     * adding it again later if the library is cosed and reopened.
+     * adding it again later if the library is closed and reopened.
      */
     if (!H5_dont_atexit_g) {
 
diff --git a/src/H5ACmodule.h b/src/H5ACmodule.h
index d1f9697..a7f9a27 100644
--- a/src/H5ACmodule.h
+++ b/src/H5ACmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5AC_MODULE
-#define H5_MY_PKG      H5AC
-#define H5_MY_PKG_ERR  H5E_CACHE
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5AC
+#define H5_MY_PKG_ERR H5E_CACHE
 
 #endif /* H5ACmodule_H */
diff --git a/src/H5Amodule.h b/src/H5Amodule.h
index 9f86ddd..3586414 100644
--- a/src/H5Amodule.h
+++ b/src/H5Amodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5A_MODULE
-#define H5_MY_PKG      H5A
-#define H5_MY_PKG_ERR  H5E_ATTR
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5A
+#define H5_MY_PKG_ERR H5E_ATTR
 
 /**\defgroup H5A H5A
  *
diff --git a/src/H5B2module.h b/src/H5B2module.h
index aa0e163..6a3131b 100644
--- a/src/H5B2module.h
+++ b/src/H5B2module.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5B2_MODULE
-#define H5_MY_PKG      H5B2
-#define H5_MY_PKG_ERR  H5E_BTREE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5B2
+#define H5_MY_PKG_ERR H5E_BTREE
 
 #endif /* H5B2module_H */
diff --git a/src/H5Bmodule.h b/src/H5Bmodule.h
index cfd3d53..9c0f73b 100644
--- a/src/H5Bmodule.h
+++ b/src/H5Bmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5B_MODULE
-#define H5_MY_PKG      H5B
-#define H5_MY_PKG_ERR  H5E_BTREE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5B
+#define H5_MY_PKG_ERR H5E_BTREE
 
 #endif /* H5Bmodule_H */
diff --git a/src/H5CXmodule.h b/src/H5CXmodule.h
index 9fbaab4..f9844a1 100644
--- a/src/H5CXmodule.h
+++ b/src/H5CXmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5CX_MODULE
-#define H5_MY_PKG      H5CX
-#define H5_MY_PKG_ERR  H5E_CONTEXT
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5CX
+#define H5_MY_PKG_ERR H5E_CONTEXT
 
 #endif /* H5CXmodule_H */
diff --git a/src/H5Cmodule.h b/src/H5Cmodule.h
index 26216ec..a3ef4d6 100644
--- a/src/H5Cmodule.h
+++ b/src/H5Cmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5C_MODULE
-#define H5_MY_PKG      H5C
-#define H5_MY_PKG_ERR  H5E_CACHE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5C
+#define H5_MY_PKG_ERR H5E_CACHE
 
 #endif /* H5Cmodule_H */
diff --git a/src/H5Dmodule.h b/src/H5Dmodule.h
index 596fd48..a05d717 100644
--- a/src/H5Dmodule.h
+++ b/src/H5Dmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5D_MODULE
-#define H5_MY_PKG      H5D
-#define H5_MY_PKG_ERR  H5E_DATASET
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5D
+#define H5_MY_PKG_ERR H5E_DATASET
 
 /**\defgroup H5D H5D
  *
diff --git a/src/H5EAmodule.h b/src/H5EAmodule.h
index 1833e40..bba2a99 100644
--- a/src/H5EAmodule.h
+++ b/src/H5EAmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5EA_MODULE
-#define H5_MY_PKG      H5EA
-#define H5_MY_PKG_ERR  H5E_EARRAY
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5EA
+#define H5_MY_PKG_ERR H5E_EARRAY
 
 #endif /* H5EAmodule_H */
diff --git a/src/H5ESmodule.h b/src/H5ESmodule.h
index 5169b52..205089a 100644
--- a/src/H5ESmodule.h
+++ b/src/H5ESmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5ES_MODULE
-#define H5_MY_PKG      H5ES
-#define H5_MY_PKG_ERR  H5E_EVENTSET
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5ES
+#define H5_MY_PKG_ERR H5E_EVENTSET
 
 /**\defgroup H5ES H5ES
  *
diff --git a/src/H5Emodule.h b/src/H5Emodule.h
index 58a3517..a2d59f3 100644
--- a/src/H5Emodule.h
+++ b/src/H5Emodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5E_MODULE
-#define H5_MY_PKG      H5E
-#define H5_MY_PKG_ERR  H5E_ERROR
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5E
+#define H5_MY_PKG_ERR H5E_ERROR
 
 /**\defgroup H5E H5E
  *
diff --git a/src/H5FAmodule.h b/src/H5FAmodule.h
index ef814ae..3fbdb90 100644
--- a/src/H5FAmodule.h
+++ b/src/H5FAmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5FA_MODULE
-#define H5_MY_PKG      H5FA
-#define H5_MY_PKG_ERR  H5E_FARRAY
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5FA
+#define H5_MY_PKG_ERR H5E_FARRAY
 
 #endif /* H5FAmodule_H */
diff --git a/src/H5FDdrvr_module.h b/src/H5FDdrvr_module.h
index 1d20fce..4a7a4d1 100644
--- a/src/H5FDdrvr_module.h
+++ b/src/H5FDdrvr_module.h
@@ -24,9 +24,7 @@
 /* Define the proper control macros for the generic FUNC_ENTER/LEAVE and error
  *      reporting macros.
  */
-#define H5_MY_PKG      H5FD
-#define H5_MY_PKG_ERR  H5E_FILE
-#define H5_MY_PKG_INIT YES
-#define H5_PKG_SINGLE_SOURCE
+#define H5_MY_PKG     H5FD
+#define H5_MY_PKG_ERR H5E_FILE
 
 #endif /* H5FDdrvr_module_H */
diff --git a/src/H5FDmodule.h b/src/H5FDmodule.h
index 0b92b27..728b4b8 100644
--- a/src/H5FDmodule.h
+++ b/src/H5FDmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5FD_MODULE
-#define H5_MY_PKG      H5FD
-#define H5_MY_PKG_ERR  H5E_VFL
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5FD
+#define H5_MY_PKG_ERR H5E_VFL
 
 #endif /* H5FDmodule_H */
diff --git a/src/H5FDmpio.c b/src/H5FDmpio.c
index 2274c7d..fe9a3c2 100644
--- a/src/H5FDmpio.c
+++ b/src/H5FDmpio.c
@@ -839,6 +839,7 @@ H5FD__mpio_open(const char *name, unsigned flags, hid_t fapl_id, haddr_t H5_ATTR
     H5P_genplist_t *plist;                /* Property list pointer */
     MPI_Comm        comm = MPI_COMM_NULL; /* MPI Communicator, from plist */
     MPI_Info        info = MPI_INFO_NULL; /* MPI Info, from plist */
+    MPI_Info        info_used;            /* MPI Info returned from MPI_File_open */
     MPI_File        fh;                   /* MPI file handle */
     hbool_t         file_opened = FALSE;  /* Flag to indicate that the file was successfully opened */
     int             mpi_amode;            /* MPI file access flags */
@@ -906,6 +907,54 @@ H5FD__mpio_open(const char *name, unsigned flags, hid_t fapl_id, haddr_t H5_ATTR
         HMPI_GOTO_ERROR(NULL, "MPI_File_open failed", mpi_code)
     file_opened = TRUE;
 
+    /* Get the MPI-IO hints that actually used by MPI-IO underneath. */
+    if (MPI_SUCCESS != (mpi_code = MPI_File_get_info(fh, &info_used)))
+        HMPI_GOTO_ERROR(NULL, "MPI_File_get_info failed", mpi_code)
+
+    /* Copy hints in info_used into info. Note hints in info_used supersede
+     * info. There may be some hints set and used by HDF5 only, but not
+     * recognizable by MPI-IO. We need to keep them, as MPI_File_get_info()
+     * will remove any hints unrecognized by MPI-IO library underneath.
+     */
+    if (info_used != MPI_INFO_NULL) {
+        int i, nkeys;
+
+        if (info == MPI_INFO_NULL) /* reuse info created from MPI_File_get_info() */
+            info = info_used;
+        else {
+            /* retrieve the number of hints */
+            if (MPI_SUCCESS != (mpi_code = MPI_Info_get_nkeys(info_used, &nkeys)))
+                HMPI_GOTO_ERROR(NULL, "MPI_Info_get_nkeys failed", mpi_code)
+
+            /* copy over each hint */
+            for (i = 0; i < nkeys; i++) {
+                char key[MPI_MAX_INFO_KEY], value[MPI_MAX_INFO_VAL];
+                int  valuelen, flag;
+
+                /* retrieve the nth hint */
+                if (MPI_SUCCESS != (mpi_code = MPI_Info_get_nthkey(info_used, i, key)))
+                    HMPI_GOTO_ERROR(NULL, "MPI_Info_get_nkeys failed", mpi_code)
+                /* retrieve the key of nth hint */
+                if (MPI_SUCCESS != (mpi_code = MPI_Info_get_valuelen(info_used, key, &valuelen, &flag)))
+                    HMPI_GOTO_ERROR(NULL, "MPI_Info_get_valuelen failed", mpi_code)
+                /* retrieve the value of nth hint */
+                if (MPI_SUCCESS != (mpi_code = MPI_Info_get(info_used, key, valuelen + 1, value, &flag)))
+                    HMPI_GOTO_ERROR(NULL, "MPI_Info_get failed", mpi_code)
+
+                /* copy the hint into info */
+                if (MPI_SUCCESS != (mpi_code = MPI_Info_set(info, key, value)))
+                    HMPI_GOTO_ERROR(NULL, "MPI_Info_set failed", mpi_code)
+            }
+
+            /* Free info_used allocated in the call to MPI_File_get_info() */
+            if (MPI_SUCCESS != (mpi_code = MPI_Info_free(&info_used)))
+                HMPI_GOTO_ERROR(NULL, "MPI_Info_free failed", mpi_code)
+        }
+        /* Add info to the file access property list */
+        if (H5P_set(plist, H5F_ACS_MPI_PARAMS_INFO_NAME, &info) < 0)
+            HGOTO_ERROR(H5E_VFL, H5E_CANTSET, NULL, "can't set MPI info object")
+    }
+
     /* Build the return value and initialize it */
     if (NULL == (file = (H5FD_mpio_t *)H5MM_calloc(sizeof(H5FD_mpio_t))))
         HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
diff --git a/src/H5FDros3.c b/src/H5FDros3.c
index e9c980b..b1bb559 100644
--- a/src/H5FDros3.c
+++ b/src/H5FDros3.c
@@ -375,7 +375,7 @@ H5FD__ros3_term(void)
  *-------------------------------------------------------------------------
  */
 herr_t
-H5Pset_fapl_ros3(hid_t fapl_id, H5FD_ros3_fapl_t *fa)
+H5Pset_fapl_ros3(hid_t fapl_id, const H5FD_ros3_fapl_t *fa)
 {
     H5P_genplist_t *plist     = NULL; /* Property list pointer */
     herr_t          ret_value = FAIL;
@@ -396,7 +396,7 @@ H5Pset_fapl_ros3(hid_t fapl_id, H5FD_ros3_fapl_t *fa)
     if (FAIL == H5FD__ros3_validate_config(fa))
         HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid ros3 config")
 
-    ret_value = H5P_set_driver(plist, H5FD_ROS3, (void *)fa, NULL);
+    ret_value = H5P_set_driver(plist, H5FD_ROS3, (const void *)fa, NULL);
 
 done:
     FUNC_LEAVE_API(ret_value)
diff --git a/src/H5FDros3.h b/src/H5FDros3.h
index 4a623c4..4c9e77f 100644
--- a/src/H5FDros3.h
+++ b/src/H5FDros3.h
@@ -105,7 +105,7 @@ H5_DLL herr_t H5Pget_fapl_ros3(hid_t fapl_id, H5FD_ros3_fapl_t *fa_out);
  *
  * \todo Add missing documentation
  */
-H5_DLL herr_t H5Pset_fapl_ros3(hid_t fapl_id, H5FD_ros3_fapl_t *fa);
+H5_DLL herr_t H5Pset_fapl_ros3(hid_t fapl_id, const H5FD_ros3_fapl_t *fa);
 
 #ifdef __cplusplus
 }
diff --git a/src/H5FLmodule.h b/src/H5FLmodule.h
index 95c0b49..0485603 100644
--- a/src/H5FLmodule.h
+++ b/src/H5FLmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5FL_MODULE
-#define H5_MY_PKG      H5FL
-#define H5_MY_PKG_ERR  H5E_RESOURCE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5FL
+#define H5_MY_PKG_ERR H5E_RESOURCE
 
 #endif /* H5FLmodule_H */
diff --git a/src/H5FSmodule.h b/src/H5FSmodule.h
index a40c103..841b8fd 100644
--- a/src/H5FSmodule.h
+++ b/src/H5FSmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5FS_MODULE
-#define H5_MY_PKG      H5FS
-#define H5_MY_PKG_ERR  H5E_FSPACE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5FS
+#define H5_MY_PKG_ERR H5E_FSPACE
 
 #endif /* H5FSmodule_H */
diff --git a/src/H5Fmodule.h b/src/H5Fmodule.h
index 81c1ede..6047693 100644
--- a/src/H5Fmodule.h
+++ b/src/H5Fmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5F_MODULE
-#define H5_MY_PKG      H5F
-#define H5_MY_PKG_ERR  H5E_FILE
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5F
+#define H5_MY_PKG_ERR H5E_FILE
 
 /**\defgroup H5F H5F
  *
diff --git a/src/H5Gmodule.h b/src/H5Gmodule.h
index a0e121d..93e7184 100644
--- a/src/H5Gmodule.h
+++ b/src/H5Gmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5G_MODULE
-#define H5_MY_PKG      H5G
-#define H5_MY_PKG_ERR  H5E_SYM
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5G
+#define H5_MY_PKG_ERR H5E_SYM
 
 /** \defgroup H5G H5G
  *
diff --git a/src/H5HFmodule.h b/src/H5HFmodule.h
index 7fab611..818c3d4 100644
--- a/src/H5HFmodule.h
+++ b/src/H5HFmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5HF_MODULE
-#define H5_MY_PKG      H5HF
-#define H5_MY_PKG_ERR  H5E_HEAP
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5HF
+#define H5_MY_PKG_ERR H5E_HEAP
 
 #endif /* H5HFmodule_H */
diff --git a/src/H5HGmodule.h b/src/H5HGmodule.h
index a75dea5..412223e 100644
--- a/src/H5HGmodule.h
+++ b/src/H5HGmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5HG_MODULE
-#define H5_MY_PKG      H5HG
-#define H5_MY_PKG_ERR  H5E_HEAP
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5HG
+#define H5_MY_PKG_ERR H5E_HEAP
 
 #endif /* H5HGmodule_H */
diff --git a/src/H5HLmodule.h b/src/H5HLmodule.h
index 3004809..5432f1a 100644
--- a/src/H5HLmodule.h
+++ b/src/H5HLmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5HL_MODULE
-#define H5_MY_PKG      H5HL
-#define H5_MY_PKG_ERR  H5E_HEAP
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5HL
+#define H5_MY_PKG_ERR H5E_HEAP
 
 #endif /* H5HLmodule_H */
diff --git a/src/H5HLpkg.h b/src/H5HLpkg.h
index 0ba3b1c..5ee9aee 100644
--- a/src/H5HLpkg.h
+++ b/src/H5HLpkg.h
@@ -51,9 +51,8 @@ H5FL_BLK_EXTERN(lheap_chunk);
  *      error reporting macros.
  */
 #ifdef H5HL_PACKAGE
-#define H5_MY_PKG      H5HL
-#define H5_MY_PKG_ERR  H5E_HEAP
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5HL
+#define H5_MY_PKG_ERR H5E_HEAP
 #endif
 
 #define H5HL_SIZEOF_HDR(F)                                                                                   \
diff --git a/src/H5Imodule.h b/src/H5Imodule.h
index 08f8bb0..cd1cbcd 100644
--- a/src/H5Imodule.h
+++ b/src/H5Imodule.h
@@ -25,9 +25,8 @@
  * reporting macros.
  */
 #define H5I_MODULE
-#define H5_MY_PKG      H5I
-#define H5_MY_PKG_ERR  H5E_ID
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5I
+#define H5_MY_PKG_ERR H5E_ID
 
 /**\defgroup H5I H5I
  *
diff --git a/src/H5Lmodule.h b/src/H5Lmodule.h
index cffd25c..d52690e 100644
--- a/src/H5Lmodule.h
+++ b/src/H5Lmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5L_MODULE
-#define H5_MY_PKG      H5L
-#define H5_MY_PKG_ERR  H5E_LINK
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5L
+#define H5_MY_PKG_ERR H5E_LINK
 
 /**\defgroup H5L H5L
  *
diff --git a/src/H5MFmodule.h b/src/H5MFmodule.h
index 9726cec..3e806c6 100644
--- a/src/H5MFmodule.h
+++ b/src/H5MFmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5MF_MODULE
-#define H5_MY_PKG      H5MF
-#define H5_MY_PKG_ERR  H5E_RESOURCE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5MF
+#define H5_MY_PKG_ERR H5E_RESOURCE
 
 #endif /* H5MFmodule_H */
diff --git a/src/H5Mmodule.h b/src/H5Mmodule.h
index 848f63f..e8d7c89 100644
--- a/src/H5Mmodule.h
+++ b/src/H5Mmodule.h
@@ -22,9 +22,8 @@
  *      reporting macros.
  */
 #define H5M_MODULE
-#define H5_MY_PKG      H5M
-#define H5_MY_PKG_ERR  H5E_MAP
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5M
+#define H5_MY_PKG_ERR H5E_MAP
 
 /**\defgroup H5M H5M
  *
diff --git a/src/H5Omodule.h b/src/H5Omodule.h
index 8afba29..18e329c 100644
--- a/src/H5Omodule.h
+++ b/src/H5Omodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5O_MODULE
-#define H5_MY_PKG      H5O
-#define H5_MY_PKG_ERR  H5E_OHDR
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5O
+#define H5_MY_PKG_ERR H5E_OHDR
 
 /**\defgroup H5O H5O
  *
diff --git a/src/H5Opublic.h b/src/H5Opublic.h
index 70f451e..ba352c8 100644
--- a/src/H5Opublic.h
+++ b/src/H5Opublic.h
@@ -291,10 +291,6 @@ H5_DLL hid_t H5Oopen_async(const char *app_file, const char *app_func, unsigned
  * \details H5Oopen_by_token() opens an object specified by the object
  *          identifier, \p loc_id and object token, \p token.
  *
- * \par Example
- *      An example snippet from examples/h5_extlink.c:
- *      \snippet h5_extlink.c H5Open_by_token_snip
- *
  * \since 1.12.0
  *
  */
diff --git a/src/H5PBmodule.h b/src/H5PBmodule.h
index 21294c8..39db5d9 100644
--- a/src/H5PBmodule.h
+++ b/src/H5PBmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5PB_MODULE
-#define H5_MY_PKG      H5PB
-#define H5_MY_PKG_ERR  H5E_RESOURCE
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5PB
+#define H5_MY_PKG_ERR H5E_RESOURCE
 
 #endif /* H5PBmodule_H */
diff --git a/src/H5PLmodule.h b/src/H5PLmodule.h
index a093096..4751a48 100644
--- a/src/H5PLmodule.h
+++ b/src/H5PLmodule.h
@@ -23,9 +23,8 @@
  *      reporting macros.
  */
 #define H5PL_MODULE
-#define H5_MY_PKG      H5PL
-#define H5_MY_PKG_ERR  H5E_PLUGIN
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5PL
+#define H5_MY_PKG_ERR H5E_PLUGIN
 
 /**\defgroup H5PL H5PL
  *
diff --git a/src/H5Pmodule.h b/src/H5Pmodule.h
index 66a9574..d771e6e 100644
--- a/src/H5Pmodule.h
+++ b/src/H5Pmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5P_MODULE
-#define H5_MY_PKG      H5P
-#define H5_MY_PKG_ERR  H5E_PLIST
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5P
+#define H5_MY_PKG_ERR H5E_PLIST
 
 /**\defgroup H5P H5P
  *
diff --git a/src/H5RSmodule.h b/src/H5RSmodule.h
index 17977c7..8cd0333 100644
--- a/src/H5RSmodule.h
+++ b/src/H5RSmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5RS_MODULE
-#define H5_MY_PKG      H5RS
-#define H5_MY_PKG_ERR  H5E_RS
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5RS
+#define H5_MY_PKG_ERR H5E_RS
 
 #endif /* H5RSmodule_H */
diff --git a/src/H5Rmodule.h b/src/H5Rmodule.h
index fe28bb2..d9ab968 100644
--- a/src/H5Rmodule.h
+++ b/src/H5Rmodule.h
@@ -21,9 +21,8 @@
  *      reporting macros.
  */
 #define H5R_MODULE
-#define H5_MY_PKG      H5R
-#define H5_MY_PKG_ERR  H5E_REFERENCE
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5R
+#define H5_MY_PKG_ERR H5E_REFERENCE
 
 /**
  * \defgroup H5R H5R
diff --git a/src/H5SLmodule.h b/src/H5SLmodule.h
index 2614f92..606fa90 100644
--- a/src/H5SLmodule.h
+++ b/src/H5SLmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5SL_MODULE
-#define H5_MY_PKG      H5SL
-#define H5_MY_PKG_ERR  H5E_SLIST
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5SL
+#define H5_MY_PKG_ERR H5E_SLIST
 
 #endif /* H5SLmodule_H */
diff --git a/src/H5SMmodule.h b/src/H5SMmodule.h
index 6d2abf1..6308e14 100644
--- a/src/H5SMmodule.h
+++ b/src/H5SMmodule.h
@@ -25,8 +25,7 @@
  *      reporting macros.
  */
 #define H5SM_MODULE
-#define H5_MY_PKG      H5SM
-#define H5_MY_PKG_ERR  H5E_SOHM
-#define H5_MY_PKG_INIT NO
+#define H5_MY_PKG     H5SM
+#define H5_MY_PKG_ERR H5E_SOHM
 
 #endif /* H5SMmodule_H */
diff --git a/src/H5Smodule.h b/src/H5Smodule.h
index 010f4a6..72d722a 100644
--- a/src/H5Smodule.h
+++ b/src/H5Smodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5S_MODULE
-#define H5_MY_PKG      H5S
-#define H5_MY_PKG_ERR  H5E_DATASPACE
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5S
+#define H5_MY_PKG_ERR H5E_DATASPACE
 
 /**\defgroup H5S H5S
  *
diff --git a/src/H5T.c b/src/H5T.c
index 27de0e4..39d7b91 100644
--- a/src/H5T.c
+++ b/src/H5T.c
@@ -473,35 +473,21 @@ hid_t H5T_NATIVE_INT_FAST64_g   = FAIL;
 hid_t H5T_NATIVE_UINT_FAST64_g  = FAIL;
 
 /*
- * Alignment constraints for native types. These are initialized at run time
- * in H5Tinit.c.  These alignments are mainly for offsets in HDF5 compound
- * datatype or C structures, which are different from the alignments for memory
- * address below this group of variables.
+ * Alignment constraints for HDF5 types.  Accessing objects of these
+ * types with improper alignment invokes C undefined behavior, so the
+ * library lays out objects with correct alignment, always.
+ *
+ * A value of N indicates that the data must be aligned on an address
+ * ADDR such that 0 == ADDR mod N. When N=1 no alignment is required;
+ * N=0 implies that alignment constraints were not calculated.  These
+ * values are used for structure alignment.
  */
-size_t H5T_NATIVE_SCHAR_COMP_ALIGN_g   = 0;
-size_t H5T_NATIVE_UCHAR_COMP_ALIGN_g   = 0;
-size_t H5T_NATIVE_SHORT_COMP_ALIGN_g   = 0;
-size_t H5T_NATIVE_USHORT_COMP_ALIGN_g  = 0;
-size_t H5T_NATIVE_INT_COMP_ALIGN_g     = 0;
-size_t H5T_NATIVE_UINT_COMP_ALIGN_g    = 0;
-size_t H5T_NATIVE_LONG_COMP_ALIGN_g    = 0;
-size_t H5T_NATIVE_ULONG_COMP_ALIGN_g   = 0;
-size_t H5T_NATIVE_LLONG_COMP_ALIGN_g   = 0;
-size_t H5T_NATIVE_ULLONG_COMP_ALIGN_g  = 0;
-size_t H5T_NATIVE_FLOAT_COMP_ALIGN_g   = 0;
-size_t H5T_NATIVE_DOUBLE_COMP_ALIGN_g  = 0;
-size_t H5T_NATIVE_LDOUBLE_COMP_ALIGN_g = 0;
-
-size_t H5T_POINTER_COMP_ALIGN_g     = 0;
-size_t H5T_HVL_COMP_ALIGN_g         = 0;
-size_t H5T_HOBJREF_COMP_ALIGN_g     = 0;
-size_t H5T_HDSETREGREF_COMP_ALIGN_g = 0;
-size_t H5T_REF_COMP_ALIGN_g         = 0;
+size_t H5T_POINTER_ALIGN_g     = 0;
+size_t H5T_HVL_ALIGN_g         = 0;
+size_t H5T_HOBJREF_ALIGN_g     = 0;
+size_t H5T_HDSETREGREF_ALIGN_g = 0;
+size_t H5T_REF_ALIGN_g         = 0;
 
-/*
- * Alignment constraints for native types. These are initialized at run time
- * in H5Tinit.c
- */
 size_t H5T_NATIVE_SCHAR_ALIGN_g   = 0;
 size_t H5T_NATIVE_UCHAR_ALIGN_g   = 0;
 size_t H5T_NATIVE_SHORT_ALIGN_g   = 0;
@@ -777,6 +763,9 @@ H5T_init(void)
     if (H5T__init_native() < 0)
         HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to initialize interface")
 
+    if (H5T__init_native_internal() < 0)
+        HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "unable to initialize integers")
+
     /* Get the atomic datatype structures needed by the initialization code below */
     if (NULL == (native_schar = (H5T_t *)H5I_object(H5T_NATIVE_SCHAR_g)))
         HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype object")
diff --git a/src/H5Tmodule.h b/src/H5Tmodule.h
index 73424fb..8f7d04d 100644
--- a/src/H5Tmodule.h
+++ b/src/H5Tmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5T_MODULE
-#define H5_MY_PKG      H5T
-#define H5_MY_PKG_ERR  H5E_DATATYPE
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5T
+#define H5_MY_PKG_ERR H5E_DATATYPE
 
 /**\defgroup H5T H5T
  *
@@ -66,17 +65,20 @@
  * \ingroup H5T
  * \defgroup ATOM Atomic Datatypes
  * \ingroup H5T
- * \defgroup COMPOUND Compound Datatypes
- * \ingroup H5T
  * \defgroup CONV Conversion Function
  * \ingroup H5T
- * \defgroup ENUM Enumeration Datatypes
- * \ingroup H5T
  * \defgroup OPAQUE Opaque Datatypes
  * \ingroup H5T
  * \defgroup VLEN Variable-length Sequence Datatypes
  * \ingroup H5T
  *
+ * \defgroup COMPENUM Compound and Enumeration Datatypes
+ * \ingroup H5T
+ * \defgroup COMPOUND Compound Datatypes
+ * \ingroup COMPENUM
+ * \defgroup ENUM Enumeration Datatypes
+ * \ingroup COMPENUM
+ *
  * \defgroup PDT Predefined Datatypes
  * \ingroup H5T
  * \details What is a predefined HDF5 datatype?
diff --git a/src/H5Tnative.c b/src/H5Tnative.c
index e75d1df..114e0a3 100644
--- a/src/H5Tnative.c
+++ b/src/H5Tnative.c
@@ -177,13 +177,13 @@ H5T__get_native_type(H5T_t *dtype, H5T_direction_t direction, size_t *struct_ali
 
             if (H5T_IS_VL_STRING(dtype->shared)) {
                 /* Update size, offset and compound alignment for parent. */
-                if (H5T__cmp_offset(comp_size, offset, sizeof(char *), (size_t)1, H5T_POINTER_COMP_ALIGN_g,
+                if (H5T__cmp_offset(comp_size, offset, sizeof(char *), (size_t)1, H5T_POINTER_ALIGN_g,
                                     struct_align) < 0)
                     HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "cannot compute compound offset")
             } /* end if */
             else {
                 /* Update size, offset and compound alignment for parent. */
-                if (H5T__cmp_offset(comp_size, offset, sizeof(char), size, H5T_NATIVE_SCHAR_COMP_ALIGN_g,
+                if (H5T__cmp_offset(comp_size, offset, sizeof(char), size, H5T_NATIVE_SCHAR_ALIGN_g,
                                     struct_align) < 0)
                     HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "cannot compute compound offset")
             } /* end else */
@@ -208,7 +208,7 @@ H5T__get_native_type(H5T_t *dtype, H5T_direction_t direction, size_t *struct_ali
                 HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "cannot retrieve float type")
 
             /* Update size, offset and compound alignment for parent. */
-            if (H5T__cmp_offset(comp_size, offset, sizeof(char), size, H5T_NATIVE_SCHAR_COMP_ALIGN_g,
+            if (H5T__cmp_offset(comp_size, offset, sizeof(char), size, H5T_NATIVE_SCHAR_ALIGN_g,
                                 struct_align) < 0)
                 HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "cannot compute compound offset")
             break;
@@ -227,7 +227,7 @@ H5T__get_native_type(H5T_t *dtype, H5T_direction_t direction, size_t *struct_ali
 
             /* Update size, offset and compound alignment for parent. */
             if (0 == H5T_cmp(ret_value, dt, FALSE)) {
-                align    = H5T_HOBJREF_COMP_ALIGN_g;
+                align    = H5T_HOBJREF_ALIGN_g;
                 ref_size = sizeof(hobj_ref_t);
             } /* end if */
             else {
@@ -236,12 +236,12 @@ H5T__get_native_type(H5T_t *dtype, H5T_direction_t direction, size_t *struct_ali
                     HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a data type")
 
                 if (0 == H5T_cmp(ret_value, dt, FALSE)) {
-                    align    = H5T_HDSETREGREF_COMP_ALIGN_g;
+                    align    = H5T_HDSETREGREF_ALIGN_g;
                     ref_size = sizeof(hdset_reg_ref_t);
                 } /* end if */
                 else {
                     /* Only pointers to underlying opaque reference types */
-                    align    = H5T_REF_COMP_ALIGN_g;
+                    align    = H5T_REF_ALIGN_g;
                     ref_size = sizeof(H5R_ref_t);
                 } /* end else */
             }     /* end else */
@@ -479,7 +479,7 @@ H5T__get_native_type(H5T_t *dtype, H5T_direction_t direction, size_t *struct_ali
                 HGOTO_ERROR(H5E_ARGS, H5E_CLOSEERROR, NULL, "cannot close datatype")
 
             /* Update size, offset and compound alignment for parent compound type directly. */
-            vl_align = H5T_HVL_COMP_ALIGN_g;
+            vl_align = H5T_HVL_ALIGN_g;
             vl_size  = sizeof(hvl_t);
 
             if (H5T__cmp_offset(comp_size, offset, vl_size, (size_t)1, vl_align, struct_align) < 0)
@@ -625,7 +625,7 @@ H5T__get_native_integer(size_t prec, H5T_sign_t sign, H5T_direction_t direction,
             else
                 tid = H5T_NATIVE_UCHAR;
 
-            align = H5T_NATIVE_SCHAR_COMP_ALIGN_g;
+            align = H5T_NATIVE_SCHAR_ALIGN_g;
             break;
 
         case H5T_NATIVE_INT_MATCH_SHORT:
@@ -633,7 +633,7 @@ H5T__get_native_integer(size_t prec, H5T_sign_t sign, H5T_direction_t direction,
                 tid = H5T_NATIVE_SHORT;
             else
                 tid = H5T_NATIVE_USHORT;
-            align = H5T_NATIVE_SHORT_COMP_ALIGN_g;
+            align = H5T_NATIVE_SHORT_ALIGN_g;
             break;
 
         case H5T_NATIVE_INT_MATCH_INT:
@@ -642,7 +642,7 @@ H5T__get_native_integer(size_t prec, H5T_sign_t sign, H5T_direction_t direction,
             else
                 tid = H5T_NATIVE_UINT;
 
-            align = H5T_NATIVE_INT_COMP_ALIGN_g;
+            align = H5T_NATIVE_INT_ALIGN_g;
             break;
 
         case H5T_NATIVE_INT_MATCH_LONG:
@@ -651,7 +651,7 @@ H5T__get_native_integer(size_t prec, H5T_sign_t sign, H5T_direction_t direction,
             else
                 tid = H5T_NATIVE_ULONG;
 
-            align = H5T_NATIVE_LONG_COMP_ALIGN_g;
+            align = H5T_NATIVE_LONG_ALIGN_g;
             break;
 
         case H5T_NATIVE_INT_MATCH_LLONG:
@@ -660,7 +660,7 @@ H5T__get_native_integer(size_t prec, H5T_sign_t sign, H5T_direction_t direction,
             else
                 tid = H5T_NATIVE_ULLONG;
 
-            align = H5T_NATIVE_LLONG_COMP_ALIGN_g;
+            align = H5T_NATIVE_LLONG_ALIGN_g;
             break;
 
         case H5T_NATIVE_INT_MATCH_UNKNOWN:
@@ -764,17 +764,17 @@ H5T__get_native_float(size_t size, H5T_direction_t direction, size_t *struct_ali
     switch (match) {
         case H5T_NATIVE_FLOAT_MATCH_FLOAT:
             tid   = H5T_NATIVE_FLOAT;
-            align = H5T_NATIVE_FLOAT_COMP_ALIGN_g;
+            align = H5T_NATIVE_FLOAT_ALIGN_g;
             break;
 
         case H5T_NATIVE_FLOAT_MATCH_DOUBLE:
             tid   = H5T_NATIVE_DOUBLE;
-            align = H5T_NATIVE_DOUBLE_COMP_ALIGN_g;
+            align = H5T_NATIVE_DOUBLE_ALIGN_g;
             break;
 
         case H5T_NATIVE_FLOAT_MATCH_LDOUBLE:
             tid   = H5T_NATIVE_LDOUBLE;
-            align = H5T_NATIVE_LDOUBLE_COMP_ALIGN_g;
+            align = H5T_NATIVE_LDOUBLE_ALIGN_g;
             break;
 
         case H5T_NATIVE_FLOAT_MATCH_UNKNOWN:
@@ -940,3 +940,324 @@ H5T__cmp_offset(size_t *comp_size, size_t *offset, size_t elem_size, size_t nele
 
     FUNC_LEAVE_NOAPI(SUCCEED)
 } /* end H5T__cmp_offset() */
+
+#define TAG_ALIGNMENT(tag) (offsetof(alignments_t, tag.x) - offsetof(alignments_t, tag))
+
+/* clang-format off */
+#define NATIVE_ENTRY_INITIALIZER(tag, type, precision, has_sign) {  \
+  .alignmentp = &H5T_NATIVE_##tag##_ALIGN_g                         \
+, .alignment = TAG_ALIGNMENT(tag)                                   \
+, .hidp = &H5T_NATIVE_##tag##_g                                     \
+, .size = sizeof(type)                                              \
+, .atomic = {                                                       \
+      .offset   = 0                                                 \
+    , .prec     = (precision != 0) ? precision : (sizeof(type) * 8) \
+    , .lsb_pad  = H5T_PAD_ZERO                                      \
+    , .msb_pad  = H5T_PAD_ZERO                                      \
+    , .u.i.sign = has_sign ? H5T_SGN_2 : H5T_SGN_NONE               \
+    }                                                               \
+}
+/* clang-format on */
+
+static H5T_order_t
+get_host_byte_order(void)
+{
+    static const union {
+        uint64_t u64;
+        char     byte[8];
+    } endian_exemplar = {.byte = {1}};
+
+    return (endian_exemplar.u64 == 1) ? H5T_ORDER_LE : H5T_ORDER_BE;
+}
+
+/* Establish `H5T_t`s for C99 integer types including fixed- and
+ * minimum-width types (uint16_t, uint_least16_t, uint_fast16_t, ...).
+ *
+ * Also establish alignment for some miscellaneous types: pointers,
+ * HDF5 references, and so on.
+ */
+herr_t
+H5T__init_native_internal(void)
+{
+    /* Here we construct a type that lets us find alignment constraints
+     * without using the alignof operator, which is not available in C99.
+     *
+     * Between each sub-struct's `char` member `c` and member `x`, the
+     * compiler must insert padding to ensure proper alignment of `x`.
+     * We can find the alignment constraint of each `x` by looking at
+     * its offset from the beginning of its sub-struct.
+     */
+    typedef struct {
+        struct {
+            char        c;
+            signed char x;
+        } SCHAR;
+        struct {
+            char          c;
+            unsigned char x;
+        } UCHAR;
+        struct {
+            char  c;
+            short x;
+        } SHORT;
+        struct {
+            char           c;
+            unsigned short x;
+        } USHORT;
+        struct {
+            char c;
+            int  x;
+        } INT;
+        struct {
+            char         c;
+            unsigned int x;
+        } UINT;
+        struct {
+            char c;
+            long x;
+        } LONG;
+        struct {
+            char          c;
+            unsigned long x;
+        } ULONG;
+        struct {
+            char      c;
+            long long x;
+        } LLONG;
+        struct {
+            char               c;
+            unsigned long long x;
+        } ULLONG;
+        struct {
+            char   c;
+            int8_t x;
+        } INT8;
+        struct {
+            char    c;
+            uint8_t x;
+        } UINT8;
+        struct {
+            char         c;
+            int_least8_t x;
+        } INT_LEAST8;
+        struct {
+            char          c;
+            uint_least8_t x;
+        } UINT_LEAST8;
+        struct {
+            char        c;
+            int_fast8_t x;
+        } INT_FAST8;
+        struct {
+            char         c;
+            uint_fast8_t x;
+        } UINT_FAST8;
+        struct {
+            char    c;
+            int16_t x;
+        } INT16;
+        struct {
+            char     c;
+            uint16_t x;
+        } UINT16;
+        struct {
+            char          c;
+            int_least16_t x;
+        } INT_LEAST16;
+        struct {
+            char           c;
+            uint_least16_t x;
+        } UINT_LEAST16;
+        struct {
+            char         c;
+            int_fast16_t x;
+        } INT_FAST16;
+        struct {
+            char          c;
+            uint_fast16_t x;
+        } UINT_FAST16;
+        struct {
+            char    c;
+            int32_t x;
+        } INT32;
+        struct {
+            char     c;
+            uint32_t x;
+        } UINT32;
+        struct {
+            char          c;
+            int_least32_t x;
+        } INT_LEAST32;
+        struct {
+            char           c;
+            uint_least32_t x;
+        } UINT_LEAST32;
+        struct {
+            char         c;
+            int_fast32_t x;
+        } INT_FAST32;
+        struct {
+            char          c;
+            uint_fast32_t x;
+        } UINT_FAST32;
+        struct {
+            char    c;
+            int64_t x;
+        } INT64;
+        struct {
+            char     c;
+            uint64_t x;
+        } UINT64;
+        struct {
+            char          c;
+            int_least64_t x;
+        } INT_LEAST64;
+        struct {
+            char           c;
+            uint_least64_t x;
+        } UINT_LEAST64;
+        struct {
+            char         c;
+            int_fast64_t x;
+        } INT_FAST64;
+        struct {
+            char          c;
+            uint_fast64_t x;
+        } UINT_FAST64;
+        struct {
+            char  c;
+            void *x;
+        } pointer;
+        struct {
+            char  c;
+            hvl_t x;
+        } hvl;
+        struct {
+            char       c;
+            hobj_ref_t x;
+        } hobjref;
+        struct {
+            char            c;
+            hdset_reg_ref_t x;
+        } hdsetregref;
+        struct {
+            char      c;
+            H5R_ref_t x;
+        } ref;
+    } alignments_t;
+
+    /* Describe a C99 type, `type`, and tell where to write its
+     * H5T_t identifier and alignment.  Tables of these descriptions
+     * drive the initialization of `H5T_t`s.
+     */
+    typedef struct {
+        /* Pointer to the global variable that receives the
+         * alignment of `type`:
+         */
+        size_t *alignmentp;
+        size_t  alignment; // natural alignment of `type`
+        /* Pointer to the global variable that receives the
+         * identifier for `type`'s H5T_t:
+         */
+        hid_t *      hidp;
+        size_t       size;   // sizeof(`type`)
+        H5T_atomic_t atomic; // `type` facts such as signedness
+    } native_int_t;
+
+    typedef struct {
+        const native_int_t *table;
+        size_t              nelmts;
+    } native_int_table_t;
+
+    /* clang-format off */
+
+    /* The library compiles with a limit on `static` object size, so
+     * I broke this table into three.
+     */
+    static const native_int_t table1[] = {
+      NATIVE_ENTRY_INITIALIZER(SCHAR, signed char, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UCHAR, unsigned char, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(SHORT, short, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(USHORT, unsigned short, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT, int, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT, unsigned int, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT, int, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT, unsigned int, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(LONG, long, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(ULONG, unsigned long, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(LLONG, long long, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(ULLONG, unsigned long long, 0, false)
+    };
+    static const native_int_t table2[] = {
+      NATIVE_ENTRY_INITIALIZER(INT8, int8_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT8, uint8_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_LEAST8, int_least8_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_LEAST8, uint_least8_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_FAST8, int_fast8_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_FAST8, uint_fast8_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT16, int16_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT16, uint16_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_LEAST16, int_least16_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_LEAST16, uint_least16_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_FAST16, int_fast16_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_FAST16, uint_fast16_t, 0, false)
+    };
+    static const native_int_t table3[] = {
+      NATIVE_ENTRY_INITIALIZER(INT32, int32_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT32, uint32_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_LEAST32, int_least32_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_LEAST32, uint_least32_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_FAST32, int_fast32_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_FAST32, uint_fast32_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT64, int64_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT64, uint64_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_LEAST64, int_least64_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_LEAST64, uint_least64_t, 0, false)
+    , NATIVE_ENTRY_INITIALIZER(INT_FAST64, int_fast64_t, 0, true)
+    , NATIVE_ENTRY_INITIALIZER(UINT_FAST64, uint_fast64_t, 0, false)
+    };
+    static const native_int_table_t table_table[] = {
+      {table1, NELMTS(table1)}
+    , {table2, NELMTS(table2)}
+    , {table3, NELMTS(table3)}
+    };
+    /* clang-format on */
+
+    size_t      i, j;
+    H5T_order_t byte_order = get_host_byte_order();
+
+    for (i = 0; i < NELMTS(table_table); i++) {
+        const native_int_t *table  = table_table[i].table;
+        size_t              nelmts = table_table[i].nelmts;
+
+        /* For each C99 type in `table`, create its H5T_t,
+         * register a hid_t for the H5T_t, and record the type's
+         * alignment and hid_t in the variables named by the
+         * table.
+         */
+        for (j = 0; j < nelmts; j++) {
+            H5T_t *dt;
+
+            if (NULL == (dt = H5T__alloc()))
+                return FAIL;
+
+            dt->shared->state          = H5T_STATE_IMMUTABLE;
+            dt->shared->type           = H5T_INTEGER;
+            dt->shared->size           = table[j].size;
+            dt->shared->u.atomic       = table[j].atomic;
+            dt->shared->u.atomic.order = byte_order;
+            *table[j].alignmentp       = table[j].alignment;
+
+            if ((*table[j].hidp = H5I_register(H5I_DATATYPE, dt, FALSE)) < 0)
+                return FAIL;
+        }
+    }
+
+    H5T_POINTER_ALIGN_g     = TAG_ALIGNMENT(pointer);
+    H5T_HVL_ALIGN_g         = TAG_ALIGNMENT(hvl);
+    H5T_HOBJREF_ALIGN_g     = TAG_ALIGNMENT(hobjref);
+    H5T_HDSETREGREF_ALIGN_g = TAG_ALIGNMENT(hdsetregref);
+    H5T_REF_ALIGN_g         = TAG_ALIGNMENT(ref);
+
+    return SUCCEED;
+}
diff --git a/src/H5Tpkg.h b/src/H5Tpkg.h
index 4062cbe..72afbeb 100644
--- a/src/H5Tpkg.h
+++ b/src/H5Tpkg.h
@@ -388,26 +388,22 @@ typedef herr_t (*H5T_operator_t)(H5T_t *dt, void *op_data /*in,out*/);
 H5_DLLVAR const unsigned H5O_dtype_ver_bounds[H5F_LIBVER_NBOUNDS];
 
 /*
- * Alignment information for native types. A value of N indicates that the
- * data must be aligned on an address ADDR such that 0 == ADDR mod N. When
- * N=1 no alignment is required; N=0 implies that alignment constraints were
- * not calculated.  These alignment info is only for H5Tget_native_type.
- * These values are used for structure alignment.
+ * Alignment constraints for HDF5 types.  Accessing objects of these
+ * types with improper alignment invokes C undefined behavior, so the
+ * library lays out objects with correct alignment, always.
+ *
+ * A value of N indicates that the data must be aligned on an address
+ * ADDR such that 0 == ADDR mod N. When N=1 no alignment is required;
+ * N=0 implies that alignment constraints were not calculated.  These
+ * values are used for structure alignment.
+ *
+ * This alignment info is only for H5Tget_native_type.
  */
-H5_DLLVAR size_t H5T_NATIVE_SCHAR_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_SHORT_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_INT_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_LONG_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_LLONG_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_FLOAT_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_DOUBLE_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_NATIVE_LDOUBLE_COMP_ALIGN_g;
-
-H5_DLLVAR size_t H5T_POINTER_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_HVL_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_HOBJREF_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_HDSETREGREF_COMP_ALIGN_g;
-H5_DLLVAR size_t H5T_REF_COMP_ALIGN_g;
+H5_DLLVAR size_t H5T_POINTER_ALIGN_g;
+H5_DLLVAR size_t H5T_HVL_ALIGN_g;
+H5_DLLVAR size_t H5T_HOBJREF_ALIGN_g;
+H5_DLLVAR size_t H5T_HDSETREGREF_ALIGN_g;
+H5_DLLVAR size_t H5T_REF_ALIGN_g;
 
 /*
  * Alignment information for native types. A value of N indicates that the
@@ -473,6 +469,7 @@ H5FL_EXTERN(H5T_shared_t);
 
 /* Common functions */
 H5_DLL herr_t H5T__init_native(void);
+H5_DLL herr_t H5T__init_native_internal(void);
 H5_DLL H5T_t *H5T__create(H5T_class_t type, size_t size);
 H5_DLL H5T_t *H5T__alloc(void);
 H5_DLL herr_t H5T__free(H5T_t *dt);
diff --git a/src/H5Tpublic.h b/src/H5Tpublic.h
index 3df7ca2..01247b2 100644
--- a/src/H5Tpublic.h
+++ b/src/H5Tpublic.h
@@ -2039,7 +2039,7 @@ H5_DLL H5T_pad_t H5Tget_inpad(hid_t type_id);
  */
 H5_DLL H5T_str_t H5Tget_strpad(hid_t type_id);
 /**
- * \ingroup COMPOUND ENUM
+ * \ingroup COMPENUM
  *
  * \brief Retrieves the number of elements in a compound or enumeration datatype
  *
@@ -2056,7 +2056,7 @@ H5_DLL H5T_str_t H5Tget_strpad(hid_t type_id);
  */
 H5_DLL int H5Tget_nmembers(hid_t type_id);
 /**
- * \ingroup COMPOUND ENUM
+ * \ingroup COMPENUM
  *
  * \brief Retrieves the name of a compound or enumeration datatype member
  *
@@ -2083,7 +2083,7 @@ H5_DLL int H5Tget_nmembers(hid_t type_id);
  */
 H5_DLL char *H5Tget_member_name(hid_t type_id, unsigned membno);
 /**
- * \ingroup COMPOUND ENUM
+ * \ingroup COMPENUM
  *
  * \brief Retrieves the index of a compound or enumeration datatype member
  *
diff --git a/src/H5Tvlen.c b/src/H5Tvlen.c
index 7bf28af..39d33d4 100644
--- a/src/H5Tvlen.c
+++ b/src/H5Tvlen.c
@@ -369,11 +369,7 @@ done:
 static herr_t
 H5T__vlen_mem_seq_getlen(H5VL_object_t H5_ATTR_UNUSED *file, const void *_vl, size_t *len)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    const hvl_t *vl = (const hvl_t *)_vl; /* Pointer to the user's hvl_t information */
-#else
     hvl_t vl; /* User's hvl_t information */
-#endif
 
     FUNC_ENTER_PACKAGE_NOERR
 
@@ -381,13 +377,12 @@ H5T__vlen_mem_seq_getlen(H5VL_object_t H5_ATTR_UNUSED *file, const void *_vl, si
     HDassert(_vl);
     HDassert(len);
 
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    *len = vl->len;
-#else
-    H5MM_memcpy(&vl, _vl, sizeof(hvl_t));
+    /* Copy to ensure correct alignment.  memcpy is best here because
+     * it optimizes to fast code.
+     */
+    HDmemcpy(&vl, _vl, sizeof(hvl_t));
 
     *len = vl.len;
-#endif
 
     FUNC_LEAVE_NOAPI(SUCCEED)
 } /* end H5T__vlen_mem_seq_getlen() */
@@ -407,25 +402,16 @@ H5T__vlen_mem_seq_getlen(H5VL_object_t H5_ATTR_UNUSED *file, const void *_vl, si
 static void *
 H5T__vlen_mem_seq_getptr(void *_vl)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    const hvl_t *vl = (const hvl_t *)_vl; /* Pointer to the user's hvl_t information */
-#else
     hvl_t vl; /* User's hvl_t information */
-#endif
 
     FUNC_ENTER_PACKAGE_NOERR
 
     /* check parameters, return result */
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    HDassert(vl);
-
-    FUNC_LEAVE_NOAPI(vl->p)
-#else
     HDassert(_vl);
-    H5MM_memcpy(&vl, _vl, sizeof(hvl_t));
+    /* Copy to ensure correct alignment. */
+    HDmemcpy(&vl, _vl, sizeof(hvl_t));
 
     FUNC_LEAVE_NOAPI(vl.p)
-#endif
 } /* end H5T__vlen_mem_seq_getptr() */
 
 /*-------------------------------------------------------------------------
@@ -443,24 +429,17 @@ H5T__vlen_mem_seq_getptr(void *_vl)
 static herr_t
 H5T__vlen_mem_seq_isnull(const H5VL_object_t H5_ATTR_UNUSED *file, void *_vl, hbool_t *isnull)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    const hvl_t *vl = (const hvl_t *)_vl; /* Pointer to the user's hvl_t information */
-#else
     hvl_t vl; /* User's hvl_t information */
-#endif
 
     FUNC_ENTER_PACKAGE_NOERR
 
     /* Check parameters */
     HDassert(_vl);
 
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    *isnull = ((vl->len == 0 || vl->p == NULL) ? TRUE : FALSE);
-#else
-    H5MM_memcpy(&vl, _vl, sizeof(hvl_t));
+    /* Copy to ensure correct alignment. */
+    HDmemcpy(&vl, _vl, sizeof(hvl_t));
 
     *isnull = ((vl.len == 0 || vl.p == NULL) ? TRUE : FALSE);
-#endif
 
     FUNC_LEAVE_NOAPI(SUCCEED)
 } /* end H5T__vlen_mem_seq_isnull() */
@@ -512,27 +491,18 @@ H5T__vlen_mem_seq_setnull(H5VL_object_t H5_ATTR_UNUSED *file, void *_vl, void H5
 static herr_t
 H5T__vlen_mem_seq_read(H5VL_object_t H5_ATTR_UNUSED *file, void *_vl, void *buf, size_t len)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    const hvl_t *vl = (const hvl_t *)_vl; /* Pointer to the user's hvl_t information */
-#else
     hvl_t vl; /* User's hvl_t information */
-#endif
 
     FUNC_ENTER_PACKAGE_NOERR
 
     /* check parameters, copy data */
     HDassert(buf);
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    HDassert(vl && vl->p);
-
-    H5MM_memcpy(buf, vl->p, len);
-#else
     HDassert(_vl);
-    H5MM_memcpy(&vl, _vl, sizeof(hvl_t));
+    /* Copy to ensure correct alignment. */
+    HDmemcpy(&vl, _vl, sizeof(hvl_t));
     HDassert(vl.p);
 
     H5MM_memcpy(buf, vl.p, len);
-#endif
 
     FUNC_LEAVE_NOAPI(SUCCEED)
 } /* end H5T__vlen_mem_seq_read() */
@@ -606,20 +576,15 @@ done:
 static herr_t
 H5T__vlen_mem_str_getlen(H5VL_object_t H5_ATTR_UNUSED *file, const void *_vl, size_t *len)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    const char *s = *(const char *const *)_vl; /* Pointer to the user's string information */
-#else
     const char *s = NULL; /* Pointer to the user's string information */
-#endif
 
     FUNC_ENTER_PACKAGE_NOERR
 
     /* check parameters */
     HDassert(_vl);
 
-#ifndef H5_NO_ALIGNMENT_RESTRICTIONS
-    H5MM_memcpy(&s, _vl, sizeof(char *));
-#endif
+    /* Copy to ensure correct alignment. */
+    HDmemcpy(&s, _vl, sizeof(char *));
 
     *len = HDstrlen(s);
 
@@ -641,21 +606,14 @@ H5T__vlen_mem_str_getlen(H5VL_object_t H5_ATTR_UNUSED *file, const void *_vl, si
 static void *
 H5T__vlen_mem_str_getptr(void *_vl)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    char *s = *(char **)_vl; /* Pointer to the user's string information */
-#else
-    char *      s = NULL; /* Pointer to the user's string information */
-#endif
+    char *s = NULL; /* Pointer to the user's string information */
 
     FUNC_ENTER_PACKAGE_NOERR
 
     /* check parameters */
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    HDassert(s);
-#else
     HDassert(_vl);
-    H5MM_memcpy(&s, _vl, sizeof(char *));
-#endif
+    /* Copy to ensure correct alignment. */
+    HDmemcpy(&s, _vl, sizeof(char *));
 
     FUNC_LEAVE_NOAPI(s)
 } /* end H5T__vlen_mem_str_getptr() */
@@ -675,17 +633,12 @@ H5T__vlen_mem_str_getptr(void *_vl)
 static herr_t
 H5T__vlen_mem_str_isnull(const H5VL_object_t H5_ATTR_UNUSED *file, void *_vl, hbool_t *isnull)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    char *s = *(char **)_vl; /* Pointer to the user's string information */
-#else
     char *s = NULL; /* Pointer to the user's string information */
-#endif
 
     FUNC_ENTER_PACKAGE_NOERR
 
-#ifndef H5_NO_ALIGNMENT_RESTRICTIONS
-    H5MM_memcpy(&s, _vl, sizeof(char *));
-#endif
+    /* Copy to ensure correct alignment. */
+    HDmemcpy(&s, _vl, sizeof(char *));
 
     *isnull = (s == NULL ? TRUE : FALSE);
 
@@ -732,23 +685,16 @@ H5T__vlen_mem_str_setnull(H5VL_object_t H5_ATTR_UNUSED *file, void *_vl, void H5
 static herr_t
 H5T__vlen_mem_str_read(H5VL_object_t H5_ATTR_UNUSED *file, void *_vl, void *buf, size_t len)
 {
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-    char *s = *(char **)_vl; /* Pointer to the user's string information */
-#else
-    char *s;        /* Pointer to the user's string information */
-#endif
+    char *s; /* Pointer to the user's string information */
 
     FUNC_ENTER_PACKAGE_NOERR
 
     if (len > 0) {
         /* check parameters */
         HDassert(buf);
-#ifdef H5_NO_ALIGNMENT_RESTRICTIONS
-        HDassert(s);
-#else
         HDassert(_vl);
-        H5MM_memcpy(&s, _vl, sizeof(char *));
-#endif
+        /* Copy to ensure correct alignment. */
+        HDmemcpy(&s, _vl, sizeof(char *));
 
         H5MM_memcpy(buf, s, len);
     } /* end if */
diff --git a/src/H5VLmodule.h b/src/H5VLmodule.h
index 8fcb961..4ea4992 100644
--- a/src/H5VLmodule.h
+++ b/src/H5VLmodule.h
@@ -23,9 +23,8 @@
  *      reporting macros.
  */
 #define H5VL_MODULE
-#define H5_MY_PKG      H5VL
-#define H5_MY_PKG_ERR  H5E_VOL
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5VL
+#define H5_MY_PKG_ERR H5E_VOL
 
 /**\defgroup H5VL H5VL
  *
diff --git a/src/H5Zmodule.h b/src/H5Zmodule.h
index 9312b72..338242e 100644
--- a/src/H5Zmodule.h
+++ b/src/H5Zmodule.h
@@ -25,9 +25,8 @@
  *      reporting macros.
  */
 #define H5Z_MODULE
-#define H5_MY_PKG      H5Z
-#define H5_MY_PKG_ERR  H5E_PLINE
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5Z
+#define H5_MY_PKG_ERR H5E_PLINE
 
 /**\defgroup H5Z H5Z
  *
diff --git a/src/H5detect.c b/src/H5detect.c
index e72d7a0..cf92398 100644
--- a/src/H5detect.c
+++ b/src/H5detect.c
@@ -49,11 +49,6 @@ static const char *FileHeader = "\n\
 #include "H5Tpublic.h"
 #include "H5Rpublic.h"
 
-/* Disable warning about cast increasing the alignment of the target type,
- * that's _exactly_ what this code is probing.  -QAK
- */
-H5_GCC_CLANG_DIAG_OFF("cast-align")
-
 #if defined(__has_attribute)
 #if __has_attribute(no_sanitize_address)
 #define HDF_NO_UBSAN __attribute__((no_sanitize_address))
@@ -66,30 +61,6 @@ H5_GCC_CLANG_DIAG_OFF("cast-align")
 
 #define MAXDETECT 64
 
-/* The ALIGNMENT test code may generate the SIGBUS, SIGSEGV, or SIGILL signals.
- * We use setjmp/longjmp in the signal handlers for recovery. But setjmp/longjmp
- * do not necessary restore the signal blocking status while sigsetjmp/siglongjmp
- * do. If sigsetjmp/siglongjmp are not supported, need to use sigprocmask to
- * unblock the signal before doing longjmp.
- */
-/* Define H5SETJMP/H5LONGJMP depending on if sigsetjmp/siglongjmp are */
-/* supported. */
-#if defined(H5_HAVE_SIGSETJMP) && defined(H5_HAVE_SIGLONGJMP)
-/* Always save blocked signals to be restored by siglongjmp. */
-#define H5JMP_BUF           sigjmp_buf
-#define H5SETJMP(buf)       HDsigsetjmp(buf, 1)
-#define H5LONGJMP(buf, val) HDsiglongjmp(buf, val)
-#define H5HAVE_SIGJMP       /* sigsetjmp/siglongjmp are supported. */
-#else
-#define H5JMP_BUF           jmp_buf
-#define H5SETJMP(buf)       HDsetjmp(buf)
-#define H5LONGJMP(buf, val) HDlongjmp(buf, val)
-#endif
-
-/* ALIGNMENT and signal-handling status codes */
-#define STA_NoALIGNMENT     0x0001 /* No ALIGNMENT Test */
-#define STA_NoHandlerVerify 0x0002 /* No signal handler Tests */
-
 /*
  * This structure holds information about a type that
  * was detected.
@@ -105,27 +76,18 @@ typedef struct detected_t {
     unsigned int  mpos, msize, imp; /* information about mantissa       */
     unsigned int  epos, esize;      /* information about exponent       */
     unsigned long bias;             /* exponent bias for floating pt    */
-    unsigned int  align;            /* required byte alignment          */
     unsigned int  comp_align;       /* alignment for structure          */
 } detected_t;
 
-/* This structure holds structure alignment for pointers, vlen and reference
- * types. */
-typedef struct malign_t {
-    const char * name;
-    unsigned int comp_align; /* alignment for structure          */
-} malign_t;
-
 FILE *rawoutstream = NULL;
 
 /* global variables types detection code */
 H5_GCC_DIAG_OFF("larger-than=")
 static detected_t d_g[MAXDETECT];
 H5_GCC_DIAG_ON("larger-than=")
-static malign_t     m_g[MAXDETECT];
-static volatile int nd_g = 0, na_g = 0;
+static volatile int nd_g = 0;
 
-static void         print_results(int nd, detected_t *d, int na, malign_t *m);
+static void         print_results(int nd, detected_t *d);
 static void         iprint(detected_t *);
 static int          byte_cmp(int, const void *, const void *, const unsigned char *);
 static unsigned int bit_cmp(unsigned int, int *, void *, void *, const unsigned char *);
@@ -134,23 +96,8 @@ static unsigned int imp_bit(unsigned int, int *, void *, void *, const unsigned
 static unsigned int find_bias(unsigned int, unsigned int, int *, void *);
 static void         precision(detected_t *);
 static void         print_header(void);
-static void         detect_C89_integers(void);
 static void         detect_C89_floats(void);
-static void         detect_C99_integers(void);
 static void         detect_C99_floats(void);
-static void         detect_C99_integers8(void);
-static void         detect_C99_integers16(void);
-static void         detect_C99_integers32(void);
-static void         detect_C99_integers64(void);
-static void         detect_alignments(void);
-static unsigned int align_g[]                = {1, 2, 4, 8, 16};
-static int          align_status_g           = 0; /* ALIGNMENT Signal Status */
-static int          sigbus_handler_called_g  = 0; /* how many times called */
-static int          sigsegv_handler_called_g = 0; /* how many times called */
-static int          sigill_handler_called_g  = 0; /* how many times called */
-static int          signal_handler_tested_g  = 0; /* how many times tested */
-static int          verify_signal_handlers(int signum, void (*handler)(int));
-static H5JMP_BUF    jbuf_g;
 
 /*-------------------------------------------------------------------------
  * Function:    precision
@@ -163,105 +110,12 @@ static H5JMP_BUF    jbuf_g;
 static void
 precision(detected_t *d)
 {
-    unsigned int n;
-
-    if (0 == d->msize) {
-        /*
-         * An integer.    The permutation can have negative values at the
-         * beginning or end which represent padding of bytes.  We must adjust
-         * the precision and offset accordingly.
-         */
-        if (d->perm[0] < 0) {
-            /*
-             * Lower addresses are padded.
-             */
-            for (n = 0; n < d->size && d->perm[n] < 0; n++)
-                /*void*/;
-            d->precision = 8 * (d->size - n);
-            d->offset    = 0;
-        }
-        else if (d->perm[d->size - 1] < 0) {
-            /*
-             * Higher addresses are padded.
-             */
-            for (n = 0; n < d->size && d->perm[d->size - (n + 1)]; n++)
-                /*void*/;
-            d->precision = 8 * (d->size - n);
-            d->offset    = 8 * n;
-        }
-        else {
-            /*
-             * No padding.
-             */
-            d->precision = 8 * d->size;
-            d->offset    = 0;
-        }
-    }
-    else {
-        /* A floating point */
-        d->offset    = MIN3(d->mpos, d->epos, d->sign);
-        d->precision = d->msize + d->esize + 1;
-    }
+    /* A floating point */
+    d->offset    = MIN3(d->mpos, d->epos, d->sign);
+    d->precision = d->msize + d->esize + 1;
 }
 
 /*-------------------------------------------------------------------------
- * Function:    DETECT_I/DETECT_BYTE
- *
- * Purpose:     These macro takes a type like `int' and a base name like
- *              `nati' and detects the byte order.  The VAR is used to
- *              construct the names of the C variables defined.
- *
- *              DETECT_I is used for types that are larger than one byte,
- *              DETECT_BYTE is used for types that are exactly one byte.
- *
- * Return:      void
- *
- *-------------------------------------------------------------------------
- */
-#define DETECT_I_BYTE_CORE(TYPE, VAR, INFO, DETECT_TYPE)                                                     \
-    {                                                                                                        \
-        DETECT_TYPE    _v;                                                                                   \
-        int            _i, _j;                                                                               \
-        unsigned char *_x;                                                                                   \
-                                                                                                             \
-        HDmemset(&INFO, 0, sizeof(INFO));                                                                    \
-        INFO.varname = #VAR;                                                                                 \
-        INFO.size    = sizeof(TYPE);                                                                         \
-                                                                                                             \
-        for (_i = sizeof(DETECT_TYPE), _v = 0; _i > 0; --_i)                                                 \
-            _v = (DETECT_TYPE)((DETECT_TYPE)(_v << 8) + (DETECT_TYPE)_i);                                    \
-                                                                                                             \
-        for (_i = 0, _x = (unsigned char *)&_v; _i < (signed)sizeof(DETECT_TYPE); _i++) {                    \
-            _j = (*_x++) - 1;                                                                                \
-            HDassert(_j < (signed)sizeof(DETECT_TYPE));                                                      \
-            INFO.perm[_i] = _j;                                                                              \
-        } /* end for */                                                                                      \
-                                                                                                             \
-        INFO.sign = ('U' != *(#VAR));                                                                        \
-        precision(&(INFO));                                                                                  \
-        ALIGNMENT(TYPE, INFO);                                                                               \
-        if (!HDstrcmp(INFO.varname, "SCHAR") || !HDstrcmp(INFO.varname, "SHORT") ||                          \
-            !HDstrcmp(INFO.varname, "INT") || !HDstrcmp(INFO.varname, "LONG") ||                             \
-            !HDstrcmp(INFO.varname, "LLONG")) {                                                              \
-            COMP_ALIGNMENT(TYPE, INFO.comp_align);                                                           \
-        }                                                                                                    \
-    }
-
-#define DETECT_BYTE(TYPE, VAR, INFO)                                                                         \
-    {                                                                                                        \
-        HDcompile_assert(sizeof(TYPE) == 1);                                                                 \
-                                                                                                             \
-        DETECT_I_BYTE_CORE(TYPE, VAR, INFO, int)                                                             \
-    }
-
-#define DETECT_I(TYPE, VAR, INFO)                                                                            \
-    {                                                                                                        \
-        HDcompile_assert(sizeof(TYPE) > 1);                                                                  \
-                                                                                                             \
-        DETECT_I_BYTE_CORE(TYPE, VAR, INFO, TYPE)                                                            \
-    }
-
-/*-------------------------------------------------------------------------
  * Function:    DETECT_F
  *
  * Purpose:     This macro takes a floating point type like `double' and
@@ -351,28 +205,12 @@ precision(detected_t *d)
         _v1       = (TYPE)1.0L;                                                                              \
         INFO.bias = find_bias(INFO.epos, INFO.esize, INFO.perm, &_v1);                                       \
         precision(&(INFO));                                                                                  \
-        ALIGNMENT(TYPE, INFO);                                                                               \
         if (!HDstrcmp(INFO.varname, "FLOAT") || !HDstrcmp(INFO.varname, "DOUBLE") ||                         \
             !HDstrcmp(INFO.varname, "LDOUBLE")) {                                                            \
             COMP_ALIGNMENT(TYPE, INFO.comp_align);                                                           \
         }                                                                                                    \
     }
 
-/*-------------------------------------------------------------------------
- * Function:    DETECT_M
- *
- * Purpose:     This macro takes only miscellaneous structures or pointer.
- *              It constructs the names and decides the alignment in structure.
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-#define DETECT_M(TYPE, VAR, INFO)                                                                            \
-    {                                                                                                        \
-        INFO.name = #VAR;                                                                                    \
-        COMP_ALIGNMENT(TYPE, INFO.comp_align);                                                               \
-    }
-
 /* Detect alignment for C structure */
 #define COMP_ALIGNMENT(TYPE, COMP_ALIGN)                                                                     \
     {                                                                                                        \
@@ -384,140 +222,6 @@ precision(detected_t *d)
         COMP_ALIGN = (unsigned int)((char *)(&(s.x)) - (char *)(&s));                                        \
     }
 
-#define ALIGNMENT(TYPE, INFO)                                                                                \
-    {                                                                                                        \
-        char *volatile _buf    = NULL;                                                                       \
-        TYPE            _val   = 1, _val2;                                                                   \
-        volatile size_t _ano   = 0;                                                                          \
-        void (*_handler)(int)  = HDsignal(SIGBUS, sigbus_handler);                                           \
-        void (*_handler2)(int) = HDsignal(SIGSEGV, sigsegv_handler);                                         \
-        void (*_handler3)(int) = HDsignal(SIGILL, sigill_handler);                                           \
-                                                                                                             \
-        _buf = (char *)HDmalloc(sizeof(TYPE) + align_g[NELMTS(align_g) - 1]);                                \
-        if (H5SETJMP(jbuf_g))                                                                                \
-            _ano++;                                                                                          \
-        if (_ano < NELMTS(align_g)) {                                                                        \
-            *((TYPE *)(_buf + align_g[_ano])) = _val;  /*possible SIGBUS or SEGSEGV*/                        \
-            _val2 = *((TYPE *)(_buf + align_g[_ano])); /*possible SIGBUS or SEGSEGV*/                        \
-            /* Cray Check: This section helps detect alignment on Cray's */                                  \
-            /*              vector machines (like the SV1) which mask off */                                 \
-            /*              pointer values when pointing to non-word aligned */                              \
-            /*              locations with pointers that are supposed to be */                               \
-            /*              word aligned. -QAK */                                                            \
-            HDmemset(_buf, 0xff, sizeof(TYPE) + align_g[NELMTS(align_g) - 1]);                               \
-            /*How to handle VAX types?*/                                                                     \
-            if (INFO.perm[0]) /* Big-Endian */                                                               \
-                HDmemcpy(_buf + align_g[_ano] + (INFO.size - ((INFO.offset + INFO.precision) / 8)),          \
-                         ((char *)&_val) + (INFO.size - ((INFO.offset + INFO.precision) / 8)),               \
-                         (size_t)(INFO.precision / 8));                                                      \
-            else /* Little-Endian */                                                                         \
-                HDmemcpy(_buf + align_g[_ano] + (INFO.offset / 8), ((char *)&_val) + (INFO.offset / 8),      \
-                         (size_t)(INFO.precision / 8));                                                      \
-            _val2 = *((TYPE *)(_buf + align_g[_ano]));                                                       \
-            H5_GCC_CLANG_DIAG_OFF("float-equal")                                                             \
-            if (_val != _val2)                                                                               \
-                H5LONGJMP(jbuf_g, 1);                                                                        \
-            H5_GCC_CLANG_DIAG_ON("float-equal")                                                              \
-            /* End Cray Check */                                                                             \
-            (INFO.align) = align_g[_ano];                                                                    \
-        }                                                                                                    \
-        else {                                                                                               \
-            (INFO.align) = 0;                                                                                \
-            fprintf(stderr, "unable to calculate alignment for %s\n", #TYPE);                                \
-        }                                                                                                    \
-        HDfree(_buf);                                                                                        \
-        HDsignal(SIGBUS, _handler);   /*restore original handler*/                                           \
-        HDsignal(SIGSEGV, _handler2); /*restore original handler*/                                           \
-        HDsignal(SIGILL, _handler3);  /*restore original handler*/                                           \
-    }
-
-/*-------------------------------------------------------------------------
- * Function:    sigsegv_handler
- *
- * Purpose:     Handler for SIGSEGV. We use signal() instead of sigaction()
- *              because it's more portable to non-Posix systems. Although
- *              it's not nearly as nice to work with, it does the job for
- *              this simple stuff.
- *
- * Return:      Returns via H5LONGJMP to jbuf_g.
- *-------------------------------------------------------------------------
- */
-static void
-sigsegv_handler(int H5_ATTR_UNUSED signo)
-{
-#if !defined(H5HAVE_SIGJMP) && defined(H5_HAVE_SIGPROCMASK)
-    /* Use sigprocmask to unblock the signal if sigsetjmp/siglongjmp are not */
-    /* supported. */
-    sigset_t set;
-
-    HDsigemptyset(&set);
-    HDsigaddset(&set, SIGSEGV);
-    HDsigprocmask(SIG_UNBLOCK, &set, NULL);
-#endif
-
-    sigsegv_handler_called_g++;
-    HDsignal(SIGSEGV, sigsegv_handler);
-    H5LONGJMP(jbuf_g, SIGSEGV);
-}
-
-/*-------------------------------------------------------------------------
- * Function:    sigbus_handler
- *
- * Purpose:     Handler for SIGBUS. We use signal() instead of sigaction()
- *              because it's more portable to non-Posix systems. Although
- *              it's not nearly as nice to work with, it does the job for
- *              this simple stuff.
- *
- * Return:      Returns via H5LONGJMP to jbuf_g.
- *-------------------------------------------------------------------------
- */
-static void
-sigbus_handler(int H5_ATTR_UNUSED signo)
-{
-#if !defined(H5HAVE_SIGJMP) && defined(H5_HAVE_SIGPROCMASK)
-    /* Use sigprocmask to unblock the signal if sigsetjmp/siglongjmp are not */
-    /* supported. */
-    sigset_t set;
-
-    HDsigemptyset(&set);
-    HDsigaddset(&set, SIGBUS);
-    HDsigprocmask(SIG_UNBLOCK, &set, NULL);
-#endif
-
-    sigbus_handler_called_g++;
-    HDsignal(SIGBUS, sigbus_handler);
-    H5LONGJMP(jbuf_g, SIGBUS);
-}
-
-/*-------------------------------------------------------------------------
- * Function:    sigill_handler
- *
- * Purpose:     Handler for SIGILL. We use signal() instead of sigaction()
- *              because it's more portable to non-Posix systems. Although
- *              it's not nearly as nice to work with, it does the job for
- *              this simple stuff.
- *
- * Return:      Returns via H5LONGJMP to jbuf_g.
- *-------------------------------------------------------------------------
- */
-static void
-sigill_handler(int H5_ATTR_UNUSED signo)
-{
-#if !defined(H5HAVE_SIGJMP) && defined(H5_HAVE_SIGPROCMASK)
-    /* Use sigprocmask to unblock the signal if sigsetjmp/siglongjmp are not */
-    /* supported. */
-    sigset_t set;
-
-    HDsigemptyset(&set);
-    HDsigaddset(&set, SIGILL);
-    HDsigprocmask(SIG_UNBLOCK, &set, NULL);
-#endif
-
-    sigill_handler_called_g++;
-    HDsignal(SIGILL, sigill_handler);
-    H5LONGJMP(jbuf_g, SIGILL);
-}
-
 /*-------------------------------------------------------------------------
  * Function:    print_results
  *
@@ -527,7 +231,7 @@ sigill_handler(int H5_ATTR_UNUSED signo)
  *-------------------------------------------------------------------------
  */
 static void
-print_results(int nd, detected_t *d, int na, malign_t *misc_align)
+print_results(int nd, detected_t *d)
 {
     int byte_order = 0; /*byte order of data types*/
     int i, j;
@@ -645,10 +349,9 @@ H5T__init_native(void)\n\
     if(NULL == (dt = H5T__alloc()))\n\
         HGOTO_ERROR(H5E_DATATYPE, H5E_NOSPACE, FAIL, \"datatype allocation failed\")\n\
     dt->shared->state = H5T_STATE_IMMUTABLE;\n\
-    dt->shared->type = H5T_%s;\n\
+    dt->shared->type = H5T_FLOAT;\n\
     dt->shared->size = %d;\n",
-                d[i].msize ? "FLOAT" : "INTEGER", /*class            */
-                d[i].size);                       /*size            */
+                d[i].size); /*size            */
 
         if (byte_order == -1)
             fprintf(rawoutstream, "\
@@ -669,46 +372,36 @@ H5T__init_native(void)\n\
                 d[i].precision);                        /*precision        */
         /*HDassert((d[i].perm[0]>0)==(byte_order>0));*/ /* Double-check that byte-order doesn't change */
 
-        if (0 == d[i].msize) {
-            /* The part unique to fixed point types */
-            fprintf(rawoutstream, "\
-    dt->shared->u.atomic.u.i.sign = H5T_SGN_%s;\n",
-                    d[i].sign ? "2" : "NONE");
-        }
-        else {
-            /* The part unique to floating point types */
-            fprintf(rawoutstream, "\
-    dt->shared->u.atomic.u.f.sign = %d;\n\
-    dt->shared->u.atomic.u.f.epos = %d;\n\
-    dt->shared->u.atomic.u.f.esize = %d;\n\
-    dt->shared->u.atomic.u.f.ebias = 0x%08lx;\n\
-    dt->shared->u.atomic.u.f.mpos = %d;\n\
-    dt->shared->u.atomic.u.f.msize = %d;\n\
-    dt->shared->u.atomic.u.f.norm = H5T_NORM_%s;\n\
-    dt->shared->u.atomic.u.f.pad = H5T_PAD_ZERO;\n",
-                    d[i].sign,                      /*sign location */
-                    d[i].epos,                      /*exponent loc    */
-                    d[i].esize,                     /*exponent size */
-                    (unsigned long)(d[i].bias),     /*exponent bias */
-                    d[i].mpos,                      /*mantissa loc    */
-                    d[i].msize,                     /*mantissa size */
-                    d[i].imp ? "IMPLIED" : "NONE"); /*normalization */
-        }
+        /* The part unique to floating point types */
+        fprintf(rawoutstream, "\
+dt->shared->u.atomic.u.f.sign = %d;\n\
+dt->shared->u.atomic.u.f.epos = %d;\n\
+dt->shared->u.atomic.u.f.esize = %d;\n\
+dt->shared->u.atomic.u.f.ebias = 0x%08lx;\n\
+dt->shared->u.atomic.u.f.mpos = %d;\n\
+dt->shared->u.atomic.u.f.msize = %d;\n\
+dt->shared->u.atomic.u.f.norm = H5T_NORM_%s;\n\
+dt->shared->u.atomic.u.f.pad = H5T_PAD_ZERO;\n",
+                d[i].sign,                      /*sign location */
+                d[i].epos,                      /*exponent loc    */
+                d[i].esize,                     /*exponent size */
+                (unsigned long)(d[i].bias),     /*exponent bias */
+                d[i].mpos,                      /*mantissa loc    */
+                d[i].msize,                     /*mantissa size */
+                d[i].imp ? "IMPLIED" : "NONE"); /*normalization */
 
         /* Register the type */
         fprintf(rawoutstream, "\
     if((H5T_NATIVE_%s_g = H5I_register(H5I_DATATYPE, dt, FALSE)) < 0)\n\
         HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, \"can't register ID for built-in datatype\")\n",
                 d[i].varname);
-        fprintf(rawoutstream, "    H5T_NATIVE_%s_ALIGN_g = %lu;\n", d[i].varname,
-                (unsigned long)(d[i].align));
 
         /* Variables for alignment of compound datatype */
         if (!HDstrcmp(d[i].varname, "SCHAR") || !HDstrcmp(d[i].varname, "SHORT") ||
             !HDstrcmp(d[i].varname, "INT") || !HDstrcmp(d[i].varname, "LONG") ||
             !HDstrcmp(d[i].varname, "LLONG") || !HDstrcmp(d[i].varname, "FLOAT") ||
             !HDstrcmp(d[i].varname, "DOUBLE") || !HDstrcmp(d[i].varname, "LDOUBLE")) {
-            fprintf(rawoutstream, "    H5T_NATIVE_%s_COMP_ALIGN_g = %lu;\n", d[i].varname,
+            fprintf(rawoutstream, "    H5T_NATIVE_%s_ALIGN_g = %lu;\n", d[i].varname,
                     (unsigned long)(d[i].comp_align));
         }
     }
@@ -727,12 +420,6 @@ H5T__init_native(void)\n\
                 "BE");
     }
 
-    /* Structure alignment for pointers, vlen and reference types */
-    fprintf(rawoutstream, "\n    /* Structure alignment for pointers, vlen and reference types */\n");
-    for (j = 0; j < na; j++)
-        fprintf(rawoutstream, "    H5T_%s_COMP_ALIGN_g = %lu;\n", misc_align[j].name,
-                (unsigned long)(misc_align[j].comp_align));
-
     fprintf(rawoutstream, "\
 \n\
 done:\n\
@@ -745,42 +432,6 @@ done:\n\
 \n\
     FUNC_LEAVE_NOAPI(ret_value);\n} /* end H5T__init_native() */\n");
 
-    /* Print the ALIGNMENT and signal-handling status as comments */
-    fprintf(rawoutstream, "\n"
-                          "/****************************************/\n"
-                          "/* ALIGNMENT and signal-handling status */\n"
-                          "/****************************************/\n");
-    if (align_status_g & STA_NoALIGNMENT)
-        fprintf(rawoutstream, "/* ALIGNAMENT test is not available */\n");
-    if (align_status_g & STA_NoHandlerVerify)
-        fprintf(rawoutstream, "/* Signal handlers verify test is not available */\n");
-        /* The following is available in H5pubconf.h. Printing them here for */
-        /* convenience. */
-#ifdef H5_HAVE_SIGSETJMP
-    fprintf(rawoutstream, "/* sigsetjmp() support: yes */\n");
-#else
-    fprintf(rawoutstream, "/* sigsetjmp() support: no */\n");
-#endif
-#ifdef H5_HAVE_SIGLONGJMP
-    fprintf(rawoutstream, "/* siglongjmp() support: yes */\n");
-#else
-    fprintf(rawoutstream, "/* siglongjmp() support: no */\n");
-#endif
-#ifdef H5_HAVE_SIGPROCMASK
-    fprintf(rawoutstream, "/* sigprocmask() support: yes */\n");
-#else
-    fprintf(rawoutstream, "/* sigprocmask() support: no */\n");
-#endif
-
-    /* Print the statistics of signal handlers called for debugging */
-    fprintf(rawoutstream, "\n"
-                          "/******************************/\n"
-                          "/* signal handlers statistics */\n"
-                          "/******************************/\n");
-    fprintf(rawoutstream, "/* signal_handlers tested: %d times */\n", signal_handler_tested_g);
-    fprintf(rawoutstream, "/* sigbus_handler called: %d times */\n", sigbus_handler_called_g);
-    fprintf(rawoutstream, "/* sigsegv_handler called: %d times */\n", sigsegv_handler_called_g);
-    fprintf(rawoutstream, "/* sigill_handler called: %d times */\n", sigill_handler_called_g);
 } /* end print_results() */
 
 /*-------------------------------------------------------------------------
@@ -820,7 +471,7 @@ iprint(detected_t *d)
             unsigned int j;
 
             for (j = 8; j > 0; --j) {
-                if (k == d->sign && d->msize) {
+                if (k == d->sign) {
                     HDfputc('S', rawoutstream);
                 }
                 else if (k >= d->epos && k < d->epos + d->esize) {
@@ -829,14 +480,8 @@ iprint(detected_t *d)
                 else if (k >= d->mpos && k < d->mpos + d->msize) {
                     HDfputc('M', rawoutstream);
                 }
-                else if (d->msize) {
-                    HDfputc('?', rawoutstream); /*unknown floating point bit */
-                }
-                else if (d->sign) {
-                    HDfputc('I', rawoutstream);
-                }
                 else {
-                    HDfputc('U', rawoutstream);
+                    HDfputc('?', rawoutstream); /*unknown floating point bit */
                 }
                 --k;
             }
@@ -853,22 +498,7 @@ iprint(detected_t *d)
     /*
      * Is there an implicit bit in the mantissa.
      */
-    if (d->msize) {
-        fprintf(rawoutstream, "    * Implicit bit? %s\n", d->imp ? "yes" : "no");
-    }
-
-    /*
-     * Alignment
-     */
-    if (0 == d->align) {
-        fprintf(rawoutstream, "    * Alignment: NOT CALCULATED\n");
-    }
-    else if (1 == d->align) {
-        fprintf(rawoutstream, "    * Alignment: none\n");
-    }
-    else {
-        fprintf(rawoutstream, "    * Alignment: %lu\n", (unsigned long)(d->align));
-    }
+    fprintf(rawoutstream, "    * Implicit bit? %s\n", d->imp ? "yes" : "no");
 }
 
 /*-------------------------------------------------------------------------
@@ -1222,35 +852,6 @@ bit.\n";
 }
 
 /*-------------------------------------------------------------------------
- * Function:    detect_C89_integers
- *
- * Purpose:     Detect C89 integer types
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_C89_integers(void)
-{
-    DETECT_BYTE(signed char, SCHAR, d_g[nd_g]);
-    nd_g++;
-    DETECT_BYTE(unsigned char, UCHAR, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(short, SHORT, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(unsigned short, USHORT, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int, INT, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(unsigned int, UINT, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(long, LONG, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(unsigned long, ULONG, d_g[nd_g]);
-    nd_g++;
-}
-
-/*-------------------------------------------------------------------------
  * Function:    detect_C89_floats
  *
  * Purpose:     Detect C89 floating point types
@@ -1268,131 +869,6 @@ detect_C89_floats(void)
 }
 
 /*-------------------------------------------------------------------------
- * Function:    detect_C99_integers8
- *
- * Purpose:     Detect C99 8 bit integer types
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_C99_integers8(void)
-{
-    DETECT_BYTE(int8_t, INT8, d_g[nd_g]);
-    nd_g++;
-    DETECT_BYTE(uint8_t, UINT8, d_g[nd_g]);
-    nd_g++;
-    DETECT_BYTE(int_least8_t, INT_LEAST8, d_g[nd_g]);
-    nd_g++;
-    DETECT_BYTE(uint_least8_t, UINT_LEAST8, d_g[nd_g]);
-    nd_g++;
-    DETECT_BYTE(int_fast8_t, INT_FAST8, d_g[nd_g]);
-    nd_g++;
-    DETECT_BYTE(uint_fast8_t, UINT_FAST8, d_g[nd_g]);
-    nd_g++;
-}
-
-/*-------------------------------------------------------------------------
- * Function:    detect_C99_integers16
- *
- * Purpose:     Detect C99 16 bit integer types
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_C99_integers16(void)
-{
-    DETECT_I(int16_t, INT16, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint16_t, UINT16, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int_least16_t, INT_LEAST16, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint_least16_t, UINT_LEAST16, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int_fast16_t, INT_FAST16, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint_fast16_t, UINT_FAST16, d_g[nd_g]);
-    nd_g++;
-}
-
-/*-------------------------------------------------------------------------
- * Function:    detect_C99_integers32
- *
- * Purpose:     Detect C99 32 bit integer types
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_C99_integers32(void)
-{
-    DETECT_I(int32_t, INT32, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint32_t, UINT32, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int_least32_t, INT_LEAST32, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint_least32_t, UINT_LEAST32, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int_fast32_t, INT_FAST32, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint_fast32_t, UINT_FAST32, d_g[nd_g]);
-    nd_g++;
-}
-
-/*-------------------------------------------------------------------------
- * Function:    detect_C99_integers64
- *
- * Purpose:     Detect C99 64 bit integer types
- *
- * Return:      void
- *
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_C99_integers64(void)
-{
-    DETECT_I(int64_t, INT64, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint64_t, UINT64, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int_least64_t, INT_LEAST64, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint_least64_t, UINT_LEAST64, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(int_fast64_t, INT_FAST64, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(uint_fast64_t, UINT_FAST64, d_g[nd_g]);
-    nd_g++;
-
-    DETECT_I(long long, LLONG, d_g[nd_g]);
-    nd_g++;
-    DETECT_I(unsigned long long, ULLONG, d_g[nd_g]);
-    nd_g++;
-}
-
-/*-------------------------------------------------------------------------
- * Function:    detect_C99_integers
- *
- * Purpose:     Detect C99 integer types
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_C99_integers(void)
-{
-    /* break it down to more subroutines so that each module subroutine */
-    /* is smaller and takes less time to compile with optimization on.  */
-    detect_C99_integers8();
-    detect_C99_integers16();
-    detect_C99_integers32();
-    detect_C99_integers64();
-}
-
-/*-------------------------------------------------------------------------
  * Function:    detect_C99_floats
  *
  * Purpose:     Detect C99 floating point types
@@ -1419,87 +895,6 @@ detect_C99_floats(void)
 }
 
 /*-------------------------------------------------------------------------
- * Function:    detect_alignments
- *
- * Purpose:     Detect structure alignments
- *
- * Return:      void
- *-------------------------------------------------------------------------
- */
-static void HDF_NO_UBSAN
-detect_alignments(void)
-{
-    /* Detect structure alignment for pointers, vlen and reference types */
-    DETECT_M(void *, POINTER, m_g[na_g]);
-    na_g++;
-    DETECT_M(hvl_t, HVL, m_g[na_g]);
-    na_g++;
-    DETECT_M(hobj_ref_t, HOBJREF, m_g[na_g]);
-    na_g++;
-    DETECT_M(hdset_reg_ref_t, HDSETREGREF, m_g[na_g]);
-    na_g++;
-    DETECT_M(H5R_ref_t, REF, m_g[na_g]);
-    na_g++;
-}
-
-/* Verify the signal handler for signal signum works correctly multiple times.
- * One possible cause of failure is that the signal handling is blocked or
- * changed to SIG_DFL after H5LONGJMP.
- * Return  0 for success, -1 for failure.
- */
-static int
-verify_signal_handlers(int signum, void (*handler)(int))
-{
-#if defined(__has_feature) /* Clang */
-#if __has_feature(address_sanitizer) || __has_feature(thread_sanitizer)
-    /* Under the address and thread sanitizers, don't raise any signals. */
-    return 0;
-#endif
-#elif defined(__SANITIZE_ADDRESS__) || defined(__SANITIZE_THREAD__) /* GCC */
-    return 0;
-#endif
-    void (*save_handler)(int) = HDsignal(signum, handler);
-    volatile int i, val;
-    int          ntries     = 5;
-    volatile int nfailures  = 0;
-    volatile int nsuccesses = 0;
-
-    for (i = 0; i < ntries; i++) {
-        val = H5SETJMP(jbuf_g);
-        if (val == 0) {
-            /* send self the signal to trigger the handler */
-            signal_handler_tested_g++;
-            HDraise(signum);
-            /* Should not reach here. Record error. */
-            nfailures++;
-        }
-        else {
-            if (val == signum) {
-                /* return from signum handler. Record a success. */
-                nsuccesses++;
-            }
-            else {
-                fprintf(stderr, "Unknown return value (%d) from H5SETJMP", val);
-                nfailures++;
-            }
-        }
-    }
-    /* restore save handler, check results and report failures */
-    HDsignal(signum, save_handler);
-    if (nfailures > 0 || nsuccesses != ntries) {
-        fprintf(stderr,
-                "verify_signal_handlers for signal %d did %d tries. "
-                "Found %d failures and %d successes\n",
-                signum, ntries, nfailures, nsuccesses);
-        return -1;
-    }
-    else {
-        /* all succeeded */
-        return 0;
-    }
-}
-
-/*-------------------------------------------------------------------------
  * Function:    main
  *
  * Purpose:     Main entry point.
@@ -1527,35 +922,15 @@ main(int argc, char *argv[])
     if (!rawoutstream)
         rawoutstream = stdout;
 
-    /* verify the SIGBUS and SIGSEGV handlers work properly */
-    if (verify_signal_handlers(SIGBUS, sigbus_handler) != 0) {
-        fprintf(stderr, "Signal handler %s for signal %d failed\n", "sigbus_handler", SIGBUS);
-    }
-    if (verify_signal_handlers(SIGSEGV, sigsegv_handler) != 0) {
-        fprintf(stderr, "Signal handler %s for signal %d failed\n", "sigsegv_handler", SIGSEGV);
-    }
-    if (verify_signal_handlers(SIGILL, sigill_handler) != 0) {
-        fprintf(stderr, "Signal handler %s for signal %d failed\n", "sigill_handler", SIGILL);
-    }
-
     print_header();
 
-    /* C89 integer types */
-    detect_C89_integers();
-
-    /* C99 integer types */
-    detect_C99_integers();
-
     /* C89 floating point types */
     detect_C89_floats();
 
     /* C99 floating point types */
     detect_C99_floats();
 
-    /* Detect structure alignment */
-    detect_alignments();
-
-    print_results(nd_g, d_g, na_g, m_g);
+    print_results(nd_g, d_g);
 
     if (rawoutstream && rawoutstream != stdout) {
         if (HDfclose(rawoutstream))
@@ -1566,5 +941,3 @@ main(int argc, char *argv[])
 
     return EXIT_SUCCESS;
 }
-
-H5_GCC_CLANG_DIAG_ON("cast-align")
diff --git a/src/H5module.h b/src/H5module.h
index f7d3cd6..642683f 100644
--- a/src/H5module.h
+++ b/src/H5module.h
@@ -22,9 +22,8 @@
  *      reporting macros.
  */
 #define H5_MODULE
-#define H5_MY_PKG      H5
-#define H5_MY_PKG_ERR  H5E_LIB
-#define H5_MY_PKG_INIT YES
+#define H5_MY_PKG     H5
+#define H5_MY_PKG_ERR H5E_LIB
 
 /**\defgroup H5 H5
  *
diff --git a/test/cross_read.c b/test/cross_read.c
index cb71996..b8a2b46 100644
--- a/test/cross_read.c
+++ b/test/cross_read.c
@@ -229,8 +229,10 @@ check_file(char *filename)
 #endif
 
     /* Open the file. */
-    if ((fid = H5Fopen(pathname, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
+    if ((fid = H5Fopen(pathname, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) {
+        nerrors++;
         FAIL_STACK_ERROR;
+    }
 
     TESTING("regular dataset of LE DOUBLE");
     nerrors += check_data_f(DATASETNAME, fid);
@@ -357,6 +359,14 @@ main(void)
 
     h5_reset();
 
+    /*
+     * Skip tests for VFDs that need modified filenames.
+     */
+    if (h5_driver_uses_modified_filename()) {
+        HDputs(" -- SKIPPED for incompatible VFD --");
+        HDexit(EXIT_SUCCESS);
+    }
+
     HDputs("\n");
     HDputs("Testing reading data created on Linux");
     h5_fixname(FILENAME[1], H5P_DEFAULT, filename, sizeof(filename));
diff --git a/test/mirror_vfd.c b/test/mirror_vfd.c
index 7047146..f66e6fc 100644
--- a/test/mirror_vfd.c
+++ b/test/mirror_vfd.c
@@ -2183,8 +2183,9 @@ test_on_disk_zoo(void)
     if (pass) {
         validate_zoo(file_id, grp_name, 0); /* sanity-check */
     }
+
     if (!pass) {
-        HDprintf(failure_mssg);
+        HDprintf("%s", failure_mssg);
         TEST_ERROR;
     }
 
@@ -2250,12 +2251,11 @@ static int
 test_vanishing_datasets(void)
 {
     struct mirrortest_filenames names;
-    hid_t                       file_id        = H5I_INVALID_HID;
-    hid_t                       fapl_id        = H5I_INVALID_HID;
-    hid_t                       dset_id        = H5I_INVALID_HID;
-    hid_t                       dspace_id      = H5I_INVALID_HID;
-    hid_t                       mirror_fapl_id = H5I_INVALID_HID;
-    hsize_t                     dims[2]        = {DATABUFFER_SIZE, DATABUFFER_SIZE};
+    hid_t                       file_id   = H5I_INVALID_HID;
+    hid_t                       fapl_id   = H5I_INVALID_HID;
+    hid_t                       dset_id   = H5I_INVALID_HID;
+    hid_t                       dspace_id = H5I_INVALID_HID;
+    hsize_t                     dims[2]   = {DATABUFFER_SIZE, DATABUFFER_SIZE};
     uint32_t                    buf[DATABUFFER_SIZE][DATABUFFER_SIZE]; /* consider malloc? */
     H5G_info_t                  group_info;
     unsigned int                i, j, k;
@@ -2333,7 +2333,7 @@ test_vanishing_datasets(void)
     file_id = H5I_INVALID_HID;
 
     /* verify there are no datasets in file */
-    file_id = H5Fopen(names.rw, H5F_ACC_RDONLY, H5P_DEFAULT);
+    file_id = H5Fopen(names.rw, H5F_ACC_RDONLY, fapl_id);
     if (file_id < 0) {
         TEST_ERROR;
     }
@@ -2348,7 +2348,7 @@ test_vanishing_datasets(void)
     if (H5Fclose(file_id) < 0) {
         TEST_ERROR;
     }
-    file_id = H5Fopen(names.wo, H5F_ACC_RDONLY, H5P_DEFAULT);
+    file_id = H5Fopen(names.wo, H5F_ACC_RDONLY, fapl_id);
     if (file_id < 0) {
         TEST_ERROR;
     }
@@ -2384,9 +2384,6 @@ test_vanishing_datasets(void)
 error:
     H5E_BEGIN_TRY
     {
-        if (mirror_fapl_id != H5I_INVALID_HID) {
-            H5Pclose(mirror_fapl_id);
-        }
         if (fapl_id != H5I_INVALID_HID) {
             H5Pclose(fapl_id);
         }
diff --git a/test/test_mirror.sh.in b/test/test_mirror.sh.in
index b3e75c6..9713f89 100644
--- a/test/test_mirror.sh.in
+++ b/test/test_mirror.sh.in
@@ -45,7 +45,9 @@ done
 RUN_DIR=mirror_vfd_test
 MIRROR_UTILS=../utils/mirror_vfd # TODO: presupposes from test/
 
-mkdir $RUN_DIR
+if [[ ! -d $RUN_DIR ]] ; then
+    mkdir $RUN_DIR
+fi
 
 # Copy program files into dedicated test directory
 for FILE in $MIRROR_UTILS/mirror_* ; do
@@ -61,6 +63,10 @@ cp mirror_vfd $RUN_DIR
 # wrapper script. Copy these libs builds if appropriate.
 if [ -f $MIRROR_UTILS/.libs/mirror_server ] ; then
     RUN_LIBS=$RUN_DIR/.libs
+    # Delete previous .libs directory, to remove any generated libtool files
+    if [[ -d $RUN_LIBS ]] ; then
+        rm -rf $RUN_LIBS
+    fi
     mkdir $RUN_LIBS
     for FILE in $MIRROR_UTILS/.libs/mirror_* ; do
         case "$FILE" in
diff --git a/test/test_swmr.sh.in b/test/test_swmr.sh.in
index 771fe4a..d61fdbb 100644
--- a/test/test_swmr.sh.in
+++ b/test/test_swmr.sh.in
@@ -170,7 +170,7 @@ do
         echo "###############################################################################"
         # Launch the Generator without SWMR_WRITE
         echo launch the swmr_generator
-        $testdir/swmr_generator $compress $index_type
+        $testdir/swmr_generator -q $compress $index_type
         if test $? -ne 0; then
             echo generator had error
             nerrors=`expr $nerrors + 1`
@@ -178,7 +178,7 @@ do
 
         # Launch the Generator with SWMR_WRITE
         echo launch the swmr_generator with SWMR_WRITE
-        $testdir/swmr_generator -s $compress $index_type
+        $testdir/swmr_generator -q -s $compress $index_type
         if test $? -ne 0; then
             echo generator had error
             nerrors=`expr $nerrors + 1`
@@ -202,7 +202,7 @@ do
         # Launch the Writer
         echo launch the swmr_start_writer
         seed="" # Put -r  command here
-        $testdir/swmr_start_write $compress $index_type $Nrecords $seed 2>&1 |tee swmr_writer.out &
+        $testdir/swmr_start_write -q $compress $index_type $Nrecords $seed 2>&1 |tee swmr_writer.out &
         pid_writer=$!
         $DPRINT pid_writer=$pid_writer
 
@@ -218,7 +218,7 @@ do
         while [ $n -lt $Nreaders ]; do
             #seed="-r ${seeds[$n]}"
             seed=""
-            $testdir/swmr_reader $Nsecs_add $seed 2>&1 |tee swmr_reader.out.$n &
+            $testdir/swmr_reader -q $Nsecs_add $seed 2>&1 |tee swmr_reader.out.$n &
             pid_readers="$pid_readers $!"
             n=`expr $n + 1`
         done
@@ -263,7 +263,7 @@ do
 
         # Launch the Generator
         echo launch the swmr_generator
-        $testdir/swmr_generator -s $compress $index_type
+        $testdir/swmr_generator -q -s $compress $index_type
         if test $? -ne 0; then
             echo generator had error
             nerrors=`expr $nerrors + 1`
@@ -275,7 +275,7 @@ do
         # Launch the Writer
         echo launch the swmr_writer
         seed="" # Put -r  command here
-        $testdir/swmr_writer -o $Nrecords $seed 2>&1 |tee swmr_writer.out &
+        $testdir/swmr_writer -q -o $Nrecords $seed 2>&1 |tee swmr_writer.out &
         pid_writer=$!
         $DPRINT pid_writer=$pid_writer
 
@@ -290,7 +290,7 @@ do
         while [ $n -lt $Nreaders ]; do
             #seed="-r ${seeds[$n]}"
             seed=""
-            $testdir/swmr_reader $Nsecs_add $seed 2>&1 |tee swmr_reader.out.$n &
+            $testdir/swmr_reader -q $Nsecs_add $seed 2>&1 |tee swmr_reader.out.$n &
             pid_readers="$pid_readers $!"
             n=`expr $n + 1`
         done
@@ -338,7 +338,7 @@ do
         # Launch the Remove Writer
         echo launch the swmr_remove_writer
         seed="" # Put -r  command here
-        $testdir/swmr_remove_writer -o $Nrecs_rem $seed 2>&1 |tee swmr_writer.out &
+        $testdir/swmr_remove_writer -q -o $Nrecs_rem $seed 2>&1 |tee swmr_writer.out &
         pid_writer=$!
         $DPRINT pid_writer=$pid_writer
 
@@ -353,7 +353,7 @@ do
         while [ $n -lt $Nreaders ]; do
             #seed="-r ${seeds[$n]}"
             seed=""
-            $testdir/swmr_remove_reader $Nsecs_rem $seed 2>&1 |tee swmr_reader.out.$n &
+            $testdir/swmr_remove_reader -q $Nsecs_rem $seed 2>&1 |tee swmr_reader.out.$n &
             pid_readers="$pid_readers $!"
             n=`expr $n + 1`
         done
@@ -398,7 +398,7 @@ do
 
         # Launch the Generator
         echo launch the swmr_generator
-        $testdir/swmr_generator $compress $index_type
+        $testdir/swmr_generator -q $compress $index_type
         if test $? -ne 0; then
             echo generator had error
             nerrors=`expr $nerrors + 1`
@@ -407,7 +407,7 @@ do
         # Launch the Writer (not in parallel - just to rebuild the datasets)
         echo launch the swmr_writer
         seed="" # Put -r  command here
-        $testdir/swmr_writer $Nrecords $seed
+        $testdir/swmr_writer -q $Nrecords $seed
         if test $? -ne 0; then
             echo writer had error
             nerrors=`expr $nerrors + 1`
@@ -419,7 +419,7 @@ do
         # Launch the Add/Remove Writer
         echo launch the swmr_addrem_writer
         seed="" # Put -r  command here
-        $testdir/swmr_addrem_writer $Nrecords $seed 2>&1 |tee swmr_writer.out &
+        $testdir/swmr_addrem_writer -q $Nrecords $seed 2>&1 |tee swmr_writer.out &
         pid_writer=$!
         $DPRINT pid_writer=$pid_writer
 
@@ -434,7 +434,7 @@ do
         while [ $n -lt $Nreaders ]; do
             #seed="-r ${seeds[$n]}"
             seed=""
-            $testdir/swmr_remove_reader $Nsecs_addrem $seed 2>&1 |tee swmr_reader.out.$n &
+            $testdir/swmr_remove_reader -q $Nsecs_addrem $seed 2>&1 |tee swmr_reader.out.$n &
             pid_readers="$pid_readers $!"
             n=`expr $n + 1`
         done
@@ -482,7 +482,7 @@ do
         #       created by the generator.
         echo launch the swmr_generator
         seed="" # Put -r  command here
-        $testdir/swmr_generator $compress $index_type $seed
+        $testdir/swmr_generator -q $compress $index_type $seed
         if test $? -ne 0; then
             echo generator had error
             nerrors=`expr $nerrors + 1`
@@ -492,7 +492,7 @@ do
         rm -f $WRITER_MESSAGE
         # Launch the Sparse writer
         echo launch the swmr_sparse_writer
-        nice -n 20 $testdir/swmr_sparse_writer $Nrecs_spa 2>&1 |tee swmr_writer.out &
+        nice -n 20 $testdir/swmr_sparse_writer -q $Nrecs_spa 2>&1 |tee swmr_writer.out &
         pid_writer=$!
         $DPRINT pid_writer=$pid_writer
 
diff --git a/testpar/t_cache.c b/testpar/t_cache.c
index 8559afb..d889b3b 100644
--- a/testpar/t_cache.c
+++ b/testpar/t_cache.c
@@ -325,7 +325,7 @@ struct mssg_t {
     unsigned magic;
 };
 
-MPI_Datatype mpi_mssg_t; /* for MPI derived type created from mssg */
+MPI_Datatype mpi_mssg_t = MPI_DATATYPE_NULL; /* for MPI derived type created from mssg */
 
 /*****************************************************************************/
 /************************** function declarations ****************************/
@@ -565,8 +565,8 @@ set_up_file_communicator(void)
     int       mpi_result;
     int       num_excluded_ranks;
     int       excluded_ranks[1];
-    MPI_Group file_group;
-    MPI_Group world_group;
+    MPI_Group file_group  = MPI_GROUP_NULL;
+    MPI_Group world_group = MPI_GROUP_NULL;
 
     if (success) {
 
@@ -674,6 +674,12 @@ set_up_file_communicator(void)
         }
     }
 
+    if (file_group != MPI_GROUP_NULL)
+        MPI_Group_free(&file_group);
+
+    if (world_group != MPI_GROUP_NULL)
+        MPI_Group_free(&world_group);
+
     return (success);
 
 } /* set_up_file_communicator() */
@@ -1195,6 +1201,9 @@ takedown_derived_types(void)
     hbool_t success = TRUE;
     int     result;
 
+    if (mpi_mssg_t == MPI_DATATYPE_NULL)
+        return (success);
+
     result = MPI_Type_free(&mpi_mssg_t);
 
     if (result != MPI_SUCCESS) {
@@ -7047,6 +7056,10 @@ finish:
     /* make sure all processes are finished before final report, cleanup
      * and exit.
      */
+
+    if (file_mpi_comm != MPI_COMM_NULL)
+        MPI_Comm_free(&file_mpi_comm);
+
     MPI_Barrier(MPI_COMM_WORLD);
     if (MAINPROCESS) { /* only process 0 reports */
         HDprintf("===================================\n");
diff --git a/testpar/t_mpi.c b/testpar/t_mpi.c
index 96cbc4b..39d7722 100644
--- a/testpar/t_mpi.c
+++ b/testpar/t_mpi.c
@@ -768,6 +768,24 @@ test_mpio_derived_dtype(char *filename)
         return 1;
     }
 
+    if ((mpi_err = MPI_Type_free(&filetype)) != MPI_SUCCESS) {
+        MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+        HDprintf("MPI_Type_free failed (%s)\n", mpi_err_str);
+        return 1;
+    }
+
+    if ((mpi_err = MPI_Type_free(&adv_filetype)) != MPI_SUCCESS) {
+        MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+        HDprintf("MPI_Type_free failed (%s)\n", mpi_err_str);
+        return 1;
+    }
+
+    if ((mpi_err = MPI_Type_free(&filetypenew)) != MPI_SUCCESS) {
+        MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+        HDprintf("MPI_Type_free failed (%s)\n", mpi_err_str);
+        return 1;
+    }
+
     if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY, MPI_INFO_NULL, &fh)) !=
         MPI_SUCCESS) {
         MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
@@ -848,7 +866,9 @@ test_mpio_special_collective(char *filename)
 {
     int          mpi_size, mpi_rank;
     MPI_File     fh;
-    MPI_Datatype etype, buftype, filetype;
+    MPI_Datatype etype;
+    MPI_Datatype filetype = MPI_BYTE;
+    MPI_Datatype buftype  = MPI_BYTE;
     char         mpi_err_str[MPI_MAX_ERROR_STRING];
     int          mpi_err_strlen;
     int          mpi_err;
@@ -906,10 +926,6 @@ test_mpio_special_collective(char *filename)
             return 1;
         } /* end if */
     }     /* end if */
-    else {
-        filetype = MPI_BYTE;
-        buftype  = MPI_BYTE;
-    } /* end else */
 
     /* Open a file */
     if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDWR | MPI_MODE_CREATE, MPI_INFO_NULL,
@@ -931,6 +947,12 @@ test_mpio_special_collective(char *filename)
         return 1;
     } /* end if */
 
+    if (filetype != MPI_BYTE && (mpi_err = MPI_Type_free(&filetype)) != MPI_SUCCESS) {
+        MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+        HDprintf("MPI_Type_free failed (%s)\n", mpi_err_str);
+        return 1;
+    }
+
     /* Collectively write into the file */
     if ((mpi_err = MPI_File_write_at_all(fh, mpi_off, writedata, bufcount, buftype, &mpi_stat)) !=
         MPI_SUCCESS) {
@@ -940,6 +962,12 @@ test_mpio_special_collective(char *filename)
         return 1;
     } /* end if */
 
+    if (buftype != MPI_BYTE && (mpi_err = MPI_Type_free(&buftype)) != MPI_SUCCESS) {
+        MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
+        HDprintf("MPI_Type_free failed (%s)\n", mpi_err_str);
+        return 1;
+    }
+
     /* Close the file */
     if ((mpi_err = MPI_File_close(&fh)) != MPI_SUCCESS) {
         MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
diff --git a/testpar/t_prop.c b/testpar/t_prop.c
index 606e100..930b895 100644
--- a/testpar/t_prop.c
+++ b/testpar/t_prop.c
@@ -535,10 +535,10 @@ external_links(void)
 
     for (i = 0; i < 2; i++) {
 
-        if (i == 0) {
+        comm = MPI_COMM_WORLD;
+
+        if (i == 0)
             doIO = 1;
-            comm = MPI_COMM_WORLD;
-        }
         else {
             doIO = mpi_rank % 2;
             mrc  = MPI_Comm_split(MPI_COMM_WORLD, doIO, mpi_rank, &comm);
@@ -614,11 +614,11 @@ external_links(void)
 
             ret = H5Fclose(fid);
             VRFY((ret >= 0), "H5Fclose succeeded");
+        }
 
-            if (i == 1) {
-                mrc = MPI_Comm_free(&comm);
-                VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free succeeded");
-            }
+        if (comm != MPI_COMM_WORLD) {
+            mrc = MPI_Comm_free(&comm);
+            VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free succeeded");
         }
     }
 
diff --git a/tools/lib/h5tools.c b/tools/lib/h5tools.c
index 3273a11..6336b41 100644
--- a/tools/lib/h5tools.c
+++ b/tools/lib/h5tools.c
@@ -555,7 +555,7 @@ h5tools_set_fapl_vfd(hid_t fapl_id, h5tools_vfd_info_t *vfd_info)
 #ifdef H5_HAVE_ROS3_VFD
                 if (!vfd_info->info)
                     H5TOOLS_GOTO_ERROR(FAIL, "Read-only S3 VFD info is invalid");
-                if (H5Pset_fapl_ros3(fapl_id, (H5FD_ros3_fapl_t *)vfd_info->info) < 0)
+                if (H5Pset_fapl_ros3(fapl_id, (const H5FD_ros3_fapl_t *)vfd_info->info) < 0)
                     H5TOOLS_GOTO_ERROR(FAIL, "H5Pset_fapl_ros3() failed");
 #else
                 H5TOOLS_GOTO_ERROR(FAIL, "Read-only S3 VFD is not enabled");
@@ -1913,6 +1913,7 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t
                         else {
                             if ((region_space = H5Ropen_region(&tref, H5P_DEFAULT, H5P_DEFAULT)) >= 0) {
                                 if (!h5tools_is_zero(&tref, H5Tget_size(H5T_STD_REF))) {
+
                                     region_type = H5Sget_select_type(region_space);
                                     if (region_type == H5S_SEL_POINTS)
                                         render_bin_output_region_points(region_space, region_id, stream,
-- 
cgit v0.12