From 21eabe6753e0c8cc2e5b7f6e3f69181b0bff9d2a Mon Sep 17 00:00:00 2001 From: Vailin Choi Date: Fri, 3 Jan 2014 15:45:08 -0500 Subject: [svn-r24610] Bring revision #24608 from revise_chunks. h5committested. --- MANIFEST | 7 + README.txt | 2 +- bin/reconfigure | 42 +- c++/src/Makefile.in | 2 +- config/lt_vers.am | 2 +- configure | 22 +- configure.ac | 2 +- fortran/src/Makefile.in | 2 +- hl/c++/src/Makefile.in | 2 +- hl/fortran/src/Makefile.in | 2 +- hl/src/Makefile.in | 2 +- release_docs/RELEASE.txt | 2 +- src/H5Ocache.c | 2 +- src/H5Osdspace.c | 2 +- src/H5public.h | 4 +- src/Makefile.in | 2 +- tools/h5diff/ph5diff_main.c | 244 ++++--- tools/h5dump/CMakeTests.cmake | 94 ++- tools/h5dump/errfiles/treadfilter.err | 59 ++ tools/h5dump/h5dumpgentest.c | 509 ++++++++++++++- tools/h5dump/testh5dump.sh.in | 31 +- tools/lib/h5diff.c | 41 -- tools/lib/ph5diff.h | 16 +- tools/testfiles/tcontiguos.ddl | 2 +- tools/testfiles/tfilters.h5 | Bin 46272 -> 46496 bytes tools/testfiles/tintsattrs.ddl | 1115 ++++++++++++++++++++++++++++++++ tools/testfiles/tintsattrs.h5 | Bin 0 -> 28912 bytes tools/testfiles/treadfilter.ddl | 358 ++++++++++ tools/testfiles/treadintfilter.ddl | 132 ++++ tools/testfiles/tscalarintattrsize.ddl | 256 ++++++++ tools/testfiles/tscalarintattrsize.h5 | Bin 0 -> 28928 bytes tools/testfiles/tscaleoffset.ddl | 4 +- vms/src/h5pubconf.h | 6 +- 33 files changed, 2748 insertions(+), 218 deletions(-) create mode 100644 tools/h5dump/errfiles/treadfilter.err create mode 100644 tools/testfiles/tintsattrs.ddl create mode 100644 tools/testfiles/tintsattrs.h5 create mode 100644 tools/testfiles/treadfilter.ddl create mode 100644 tools/testfiles/treadintfilter.ddl create mode 100644 tools/testfiles/tscalarintattrsize.ddl create mode 100644 tools/testfiles/tscalarintattrsize.h5 diff --git a/MANIFEST b/MANIFEST index 8c5fd71..e112829 100644 --- a/MANIFEST +++ b/MANIFEST @@ -1592,6 +1592,8 @@ ./tools/testfiles/tindicessub3.ddl ./tools/testfiles/tindicessub4.ddl ./tools/testfiles/tindicessub1.ddl +./tools/testfiles/tintsattrs.ddl +./tools/testfiles/tintsattrs.h5 ./tools/testfiles/tlarge_objname.ddl ./tools/testfiles/tlarge_objname.h5 ./tools/testfiles/tldouble.h5 @@ -1637,11 +1639,15 @@ ./tools/testfiles/trawdatafile.exp ./tools/testfiles/trawssetfile.ddl ./tools/testfiles/trawssetfile.exp +./tools/testfiles/treadfilter.ddl +./tools/testfiles/treadintfilter.ddl ./tools/testfiles/treference.ddl ./tools/testfiles/tsaf.ddl ./tools/testfiles/tsaf.h5 ./tools/testfiles/tscalarattrintsize.ddl ./tools/testfiles/tscalarattrintsize.h5 +./tools/testfiles/tscalarintattrsize.ddl +./tools/testfiles/tscalarintattrsize.h5 ./tools/testfiles/tscalarintsize.ddl ./tools/testfiles/tscalarintsize.h5 ./tools/testfiles/tscalarstring.ddl @@ -1728,6 +1734,7 @@ ./tools/h5dump/errfiles/tpbitsOffsetExceeded.err ./tools/h5dump/errfiles/tpbitsOffsetNegative.err ./tools/h5dump/errfiles/tperror.err +./tools/h5dump/errfiles/treadfilter.err ./tools/h5dump/errfiles/tqmarkfile.err ./tools/h5dump/errfiles/tslink-D.err diff --git a/README.txt b/README.txt index 7cb037f..2b2f675 100644 --- a/README.txt +++ b/README.txt @@ -1,4 +1,4 @@ -HDF5 version 1.9.169-swmr_chksum2 currently under development +HDF5 version 1.9.170-swmr_chksum2 currently under development Please refer to the release_docs/INSTALL file for installation instructions. ------------------------------------------------------------------------------ diff --git a/bin/reconfigure b/bin/reconfigure index dba5a67..c058a1e 100755 --- a/bin/reconfigure +++ b/bin/reconfigure @@ -29,9 +29,9 @@ # HDF5 currently uses the following versions of the autotools: AUTOCONF_VERSION="autoconf (GNU Autoconf) 2.69" -AUTOMAKE_VERSION="automake (GNU automake) 1.12.3" +AUTOMAKE_VERSION="automake (GNU automake) 1.13.4" AUTOHEADER_VERSION="autoheader (GNU Autoconf) 2.69" -ACLOCAL_VERSION="aclocal (GNU automake) 1.12.3" +ACLOCAL_VERSION="aclocal (GNU automake) 1.13.4" LIBTOOL_VERSION="(GNU libtool) 2.4.2" M4_VERSION="m4 (GNU M4) 1.4.16" @@ -42,23 +42,26 @@ M4_VERSION="m4 (GNU M4) 1.4.16" # If paths to autotools are not specified by the user, assume tools are # running on jam in /mnt/hdf/packages and set paths accordingly. +if test -z ${AUTORECONF}; then + AUTORECONF=/usr/bin/autoreconf +fi if test -z ${AUTOCONF}; then - AUTOCONF=/mnt/hdf/packages/autoconf/autoconf-2.69/bin/autoconf + AUTOCONF=/usr/bin/autoconf fi if test -z ${AUTOMAKE}; then - AUTOMAKE=/mnt/hdf/packages/automake/automake-1.12.3/bin/automake-1.12 + AUTOMAKE=/usr/bin/automake-1.13 fi if test -z ${AUTOHEADER}; then - AUTOHEADER=/mnt/hdf/packages/autoconf/autoconf-2.69/bin/autoheader + AUTOHEADER=/usr/bin/autoheader fi if test -z ${ACLOCAL}; then - ACLOCAL=/mnt/hdf/packages/automake/automake-1.12.3/bin/aclocal-1.12 + ACLOCAL=/usr/bin/aclocal-1.13 fi if test -z ${LIBTOOL}; then - LIBTOOL=/mnt/hdf/packages/libtool/libtool-2.4.2/bin/libtool + LIBTOOL=/usr/bin/libtool fi if test -z ${M4}; then - M4=/mnt/hdf/packages/m4/m4-1.4.16/bin/m4 + M4=/usr/bin/m4 fi # Check version numbers of all autotools against the "correct" versions @@ -100,17 +103,20 @@ M4_DIR=`dirname ${M4}` PATH=${AUTOCONF_DIR}:${M4_DIR}:$PATH # Run autoconf/automake commands in order - echo ${ACLOCAL} -I ${LIBTOOL_DIR}/../share/aclocal - ${ACLOCAL} -I ${LIBTOOL_DIR}/../share/aclocal || exit 1 - - echo ${AUTOHEADER} - ${AUTOHEADER} || exit 1 - - echo ${AUTOMAKE} --add-missing - ${AUTOMAKE} --add-missing || exit 1 +# echo ${ACLOCAL} -I ${LIBTOOL_DIR}/../share/aclocal +# ${ACLOCAL} -I ${LIBTOOL_DIR}/../share/aclocal || exit 1 +# +# echo ${AUTOHEADER} +# ${AUTOHEADER} || exit 1 +# +# echo ${AUTOMAKE} --add-missing +# ${AUTOMAKE} --add-missing || exit 1 +# +# echo ${AUTOCONF} +# ${AUTOCONF} || exit 1 - echo ${AUTOCONF} - ${AUTOCONF} || exit 1 + echo ${AUTORECONF} + ${AUTORECONF} || exit 1 # Clean up top-level Makefile.in # pmake wants an argument to be the first non-comment line it encounters diff --git a/c++/src/Makefile.in b/c++/src/Makefile.in index 2a39e46..ef8094d 100644 --- a/c++/src/Makefile.in +++ b/c++/src/Makefile.in @@ -469,7 +469,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 # Include src directory diff --git a/config/lt_vers.am b/config/lt_vers.am index 7027aaa..7dd12cc 100644 --- a/config/lt_vers.am +++ b/config/lt_vers.am @@ -17,7 +17,7 @@ # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 ## If the API changes *at all*, increment LT_VERS_INTERFACE and diff --git a/configure b/configure index b6d87c9..05e5f54 100755 --- a/configure +++ b/configure @@ -1,7 +1,7 @@ #! /bin/sh # From configure.ac Id: configure.ac 22697 2012-08-19 14:35:47Z hdftest . # Guess values for system-dependent variables and create Makefiles. -# Generated by GNU Autoconf 2.69 for HDF5 1.9.169-swmr_chksum2. +# Generated by GNU Autoconf 2.69 for HDF5 1.9.170-swmr_chksum2. # # Report bugs to . # @@ -591,8 +591,8 @@ MAKEFLAGS= # Identity of this package. PACKAGE_NAME='HDF5' PACKAGE_TARNAME='hdf5' -PACKAGE_VERSION='1.9.169-swmr_chksum2' -PACKAGE_STRING='HDF5 1.9.169-swmr_chksum2' +PACKAGE_VERSION='1.9.170-swmr_chksum2' +PACKAGE_STRING='HDF5 1.9.170-swmr_chksum2' PACKAGE_BUGREPORT='help@hdfgroup.org' PACKAGE_URL='' @@ -1492,7 +1492,7 @@ if test "$ac_init_help" = "long"; then # Omit some internal or obsolete options to make the list less imposing. # This message is too long to be a string in the A/UX 3.1 sh. cat <<_ACEOF -\`configure' configures HDF5 1.9.169-swmr_chksum2 to adapt to many kinds of systems. +\`configure' configures HDF5 1.9.170-swmr_chksum2 to adapt to many kinds of systems. Usage: $0 [OPTION]... [VAR=VALUE]... @@ -1562,7 +1562,7 @@ fi if test -n "$ac_init_help"; then case $ac_init_help in - short | recursive ) echo "Configuration of HDF5 1.9.169-swmr_chksum2:";; + short | recursive ) echo "Configuration of HDF5 1.9.170-swmr_chksum2:";; esac cat <<\_ACEOF @@ -1761,7 +1761,7 @@ fi test -n "$ac_init_help" && exit $ac_status if $ac_init_version; then cat <<\_ACEOF -HDF5 configure 1.9.169-swmr_chksum2 +HDF5 configure 1.9.170-swmr_chksum2 generated by GNU Autoconf 2.69 Copyright (C) 2012 Free Software Foundation, Inc. @@ -2855,7 +2855,7 @@ cat >config.log <<_ACEOF This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. -It was created by HDF5 $as_me 1.9.169-swmr_chksum2, which was +It was created by HDF5 $as_me 1.9.170-swmr_chksum2, which was generated by GNU Autoconf 2.69. Invocation command line was $ $0 $@ @@ -3687,7 +3687,7 @@ fi # Define the identity of the package. PACKAGE='hdf5' - VERSION='1.9.169-swmr_chksum2' + VERSION='1.9.170-swmr_chksum2' cat >>confdefs.h <<_ACEOF @@ -31676,7 +31676,7 @@ Usage: $0 [OPTIONS] Report bugs to ." lt_cl_version="\ -HDF5 config.lt 1.9.169-swmr_chksum2 +HDF5 config.lt 1.9.170-swmr_chksum2 configured by $0, generated by GNU Autoconf 2.69. Copyright (C) 2011 Free Software Foundation, Inc. @@ -33814,7 +33814,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1 # report actual input values of CONFIG_FILES etc. instead of their # values after options handling. ac_log=" -This file was extended by HDF5 $as_me 1.9.169-swmr_chksum2, which was +This file was extended by HDF5 $as_me 1.9.170-swmr_chksum2, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = $CONFIG_FILES @@ -33880,7 +33880,7 @@ _ACEOF cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`" ac_cs_version="\\ -HDF5 config.status 1.9.169-swmr_chksum2 +HDF5 config.status 1.9.170-swmr_chksum2 configured by $0, generated by GNU Autoconf 2.69, with options \\"\$ac_cs_config\\" diff --git a/configure.ac b/configure.ac index 6d6b442..63eea9a 100644 --- a/configure.ac +++ b/configure.ac @@ -26,7 +26,7 @@ AC_PREREQ([2.69]) ## NOTE: Do not forget to change the version number here when we do a ## release!!! ## -AC_INIT([HDF5], [1.9.169-swmr_chksum2], [help@hdfgroup.org]) +AC_INIT([HDF5], [1.9.170-swmr_chksum2], [help@hdfgroup.org]) AC_CONFIG_SRCDIR([src/H5.c]) AC_CONFIG_HEADER([src/H5config.h]) diff --git a/fortran/src/Makefile.in b/fortran/src/Makefile.in index df3a1a6..61f729d 100644 --- a/fortran/src/Makefile.in +++ b/fortran/src/Makefile.in @@ -520,7 +520,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 # Include src directory in both Fortran and C flags (C compiler is used diff --git a/hl/c++/src/Makefile.in b/hl/c++/src/Makefile.in index 9daaccc..3d28ac9 100644 --- a/hl/c++/src/Makefile.in +++ b/hl/c++/src/Makefile.in @@ -460,7 +460,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 # Include src directory diff --git a/hl/fortran/src/Makefile.in b/hl/fortran/src/Makefile.in index 860aa09..e1a3206 100644 --- a/hl/fortran/src/Makefile.in +++ b/hl/fortran/src/Makefile.in @@ -476,7 +476,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 INCLUDES = -I$(top_srcdir)/src -I$(top_srcdir)/hl/src -I$(top_builddir)/hl/src \ -I$(top_srcdir)/fortran/src -I$(top_builddir)/fortran/src diff --git a/hl/src/Makefile.in b/hl/src/Makefile.in index 839dac9..13daa39 100644 --- a/hl/src/Makefile.in +++ b/hl/src/Makefile.in @@ -459,7 +459,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 # This library is our main target. diff --git a/release_docs/RELEASE.txt b/release_docs/RELEASE.txt index 9e9e28b..bb496cc 100644 --- a/release_docs/RELEASE.txt +++ b/release_docs/RELEASE.txt @@ -1,4 +1,4 @@ -HDF5 version 1.9.169-swmr_chksum2 currently under development +HDF5 version 1.9.170-swmr_chksum2 currently under development INTRODUCTION diff --git a/src/H5Ocache.c b/src/H5Ocache.c index 7c896c1..f03dc55 100644 --- a/src/H5Ocache.c +++ b/src/H5Ocache.c @@ -1626,7 +1626,7 @@ H5O_chunk_proxy_dest(H5O_chunk_proxy_t *chk_proxy) HDassert(chk_proxy); /* Decrement reference count of object header */ - if(H5O_dec_rc(chk_proxy->oh) < 0) + if(chk_proxy->oh && H5O_dec_rc(chk_proxy->oh) < 0) HGOTO_ERROR(H5E_OHDR, H5E_CANTDEC, FAIL, "can't decrement reference count on object header") /* Release the chunk proxy object */ diff --git a/src/H5Osdspace.c b/src/H5Osdspace.c index 905c4e9..9ca8436 100644 --- a/src/H5Osdspace.c +++ b/src/H5Osdspace.c @@ -526,7 +526,7 @@ H5O_sdspace_debug(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, const void *mesg, HDfprintf (stream, "{"); for(u = 0; u < sdim->rank; u++) { if(H5S_UNLIMITED==sdim->max[u]) - HDfprintf (stream, "%sINF", u?", ":""); + HDfprintf (stream, "%sUNLIM", u?", ":""); else HDfprintf (stream, "%s%Hu", u?", ":"", sdim->max[u]); } /* end for */ diff --git a/src/H5public.h b/src/H5public.h index d3e06fe..f8ebfb3 100644 --- a/src/H5public.h +++ b/src/H5public.h @@ -75,10 +75,10 @@ extern "C" { /* Version numbers */ #define H5_VERS_MAJOR 1 /* For major interface/format changes */ #define H5_VERS_MINOR 9 /* For minor interface/format changes */ -#define H5_VERS_RELEASE 169 /* For tweaks, bug-fixes, or development */ +#define H5_VERS_RELEASE 170 /* For tweaks, bug-fixes, or development */ #define H5_VERS_SUBRELEASE "swmr_chksum2" /* For pre-releases like snap0 */ /* Empty string for real releases. */ -#define H5_VERS_INFO "HDF5 library version: 1.9.169-swmr_chksum2" /* Full version string */ +#define H5_VERS_INFO "HDF5 library version: 1.9.170-swmr_chksum2" /* Full version string */ #define H5check() H5check_version(H5_VERS_MAJOR,H5_VERS_MINOR, \ H5_VERS_RELEASE) diff --git a/src/Makefile.in b/src/Makefile.in index ecbcaa1..9da91c1 100644 --- a/src/Makefile.in +++ b/src/Makefile.in @@ -523,7 +523,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 159 +LT_VERS_REVISION = 160 LT_VERS_AGE = 0 # Our main target, the HDF5 library diff --git a/tools/h5diff/ph5diff_main.c b/tools/h5diff/ph5diff_main.c index b9bd404..a26b6e9 100644 --- a/tools/h5diff/ph5diff_main.c +++ b/tools/h5diff/ph5diff_main.c @@ -13,11 +13,12 @@ * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#include "h5diff.h" -#include "ph5diff.h" #include #include #include +#include "H5private.h" +#include "h5diff.h" +#include "ph5diff.h" #include "h5diff_common.h" #include "h5tools.h" #include "h5tools_utils.h" @@ -30,9 +31,9 @@ static void ph5diff_worker(int ); /*------------------------------------------------------------------------- * Function: main * - * Purpose: h5diff/ph5diff main program + * Purpose: ph5diff main program * - * Return: An exit status of 0 means no differences were found, 1 means some + * Return: An exit status of 0 means no differences were found, 1 means some * differences were found. * * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu @@ -41,16 +42,6 @@ static void ph5diff_worker(int ); * * Comments: * - * Modifications: July 2004 - * Introduced the four modes: - * Normal mode: print the number of differences found and where they occured - * Report mode: print the above plus the differences - * Verbose mode: print the above plus a list of objects and warnings - * Quiet mode: do not print output - * - * November 2004: Leon Arber (larber@uiuc.edu) - * Additions that allow h5diff to be run in parallel - * * This function drives the diff process and will do a serial or parallel diff depending * on the value of the global variable g_Parallel (default is 0), set to 1 when the program * is run as "ph5diff" @@ -140,112 +131,165 @@ int main(int argc, const char *argv[]) static void ph5diff_worker(int nID) { - struct diff_mpi_args args; - hid_t file1_id, file2_id; - char filenames[2][MAX_FILENAME]; - char out_data[PRINT_DATA_MAX_SIZE] = {0}; - struct diffs_found diffs; - int i; - MPI_Status Status; - - outBuffOffset = 0; + hid_t file1_id = -1, file2_id = -1; - MPI_Recv(filenames, MAX_FILENAME*2, MPI_CHAR, 0, MPI_ANY_TAG, MPI_COMM_WORLD, &Status); - if(Status.MPI_TAG == MPI_TAG_PARALLEL) + while(1) { - /* disable error reporting */ - H5E_BEGIN_TRY + MPI_Status Status; + + MPI_Probe(0, MPI_ANY_TAG, MPI_COMM_WORLD, &Status); + + /* Check for filenames */ + if(Status.MPI_TAG == MPI_TAG_PARALLEL) { - /* Open the files */ - if ((file1_id = H5Fopen (filenames[0], H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) + char filenames[2][MAX_FILENAME]; + + /* Retrieve filenames */ + MPI_Recv(filenames, MAX_FILENAME*2, MPI_CHAR, 0, MPI_ANY_TAG, MPI_COMM_WORLD, &Status); + + /* disable error reporting */ + H5E_BEGIN_TRY { - printf ("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[0]); - MPI_Abort(MPI_COMM_WORLD, 0); + /* Open the files */ + if ((file1_id = H5Fopen (filenames[0], H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) + { + printf ("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[0]); + MPI_Abort(MPI_COMM_WORLD, 0); + } + if ((file2_id = H5Fopen (filenames[1], H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) + { + printf ("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[1]); + MPI_Abort(MPI_COMM_WORLD, 0); + } + /* enable error reporting */ } - if ((file2_id = H5Fopen (filenames[1], H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) + H5E_END_TRY; + } + /* Check for work */ + else if(Status.MPI_TAG == MPI_TAG_ARGS) + { + struct diff_mpi_args args; + struct diffs_found diffs; + int i; + + /* Make certain we've received the filenames and opened the files already */ + if(file1_id < 0 || file2_id < 0) { - printf ("h5diff Task [%d]: <%s>: unable to open file\n", nID, filenames[1]); - MPI_Abort(MPI_COMM_WORLD, 0); + printf("ph5diff_worker: ERROR: work received before/without filenames\n"); + break; } - /* enable error reporting */ - } - H5E_END_TRY; + /* Recv parameters for diff from manager task */ + MPI_Recv(&args, sizeof(args), MPI_BYTE, 0, MPI_TAG_ARGS, MPI_COMM_WORLD, &Status); - while(1) - { - MPI_Probe(0, MPI_ANY_TAG, MPI_COMM_WORLD, &Status); + /* Do the diff */ + diffs.nfound = diff(file1_id, args.name1, file2_id, args.name2, &(args.options), &(args.argdata)); + diffs.not_cmp = args.options.not_cmp; - if(Status.MPI_TAG == MPI_TAG_ARGS) + /* If print buffer has something in it, request print token.*/ + if(outBuffOffset>0) { - /*Recv parameters for diff from manager task */ - MPI_Recv(&args, sizeof(args), MPI_BYTE, 0, MPI_TAG_ARGS, MPI_COMM_WORLD, &Status); - /*Do the diff */ - diffs.nfound = diff(file1_id, args.name1, file2_id, args.name2, &(args.options), &(args.argdata)); - diffs.not_cmp = args.options.not_cmp; - - /*If print buffer has something in it, request print token.*/ - if(outBuffOffset>0) - { - MPI_Send(NULL, 0, MPI_BYTE, 0, MPI_TAG_TOK_REQUEST, MPI_COMM_WORLD); - /*Wait for print token. */ - MPI_Recv(NULL, 0, MPI_BYTE, 0, MPI_TAG_PRINT_TOK, MPI_COMM_WORLD, &Status); + MPI_Send(NULL, 0, MPI_BYTE, 0, MPI_TAG_TOK_REQUEST, MPI_COMM_WORLD); - /*When get token, send all of our output to the manager task and then return the token */ - for(i=0; i= 0) + rewind(overflow_file); + while((tmp = getc(overflow_file)) >= 0) + { + *(out_data + i++) = (char)tmp; + if(i==PRINT_DATA_MAX_SIZE) { - *(out_data + i++) = (char)tmp; - if(i==PRINT_DATA_MAX_SIZE) - { - MPI_Send(out_data, PRINT_DATA_MAX_SIZE, MPI_BYTE, 0, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD); - i=0; - memset(out_data, 0, PRINT_DATA_MAX_SIZE); - } - } - - if(i>0) MPI_Send(out_data, PRINT_DATA_MAX_SIZE, MPI_BYTE, 0, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD); - - fclose(overflow_file); - overflow_file = NULL; + i=0; + memset(out_data, 0, PRINT_DATA_MAX_SIZE); + } } - fflush(stdout); - memset(outBuff, 0, OUTBUFF_SIZE); - outBuffOffset = 0; + if(i>0) + MPI_Send(out_data, PRINT_DATA_MAX_SIZE, MPI_BYTE, 0, MPI_TAG_PRINT_DATA, MPI_COMM_WORLD); - MPI_Send(&diffs, sizeof(diffs), MPI_BYTE, 0, MPI_TAG_TOK_RETURN, MPI_COMM_WORLD); + fclose(overflow_file); + overflow_file = NULL; } - else - MPI_Send(&diffs, sizeof(diffs), MPI_BYTE, 0, MPI_TAG_DONE, MPI_COMM_WORLD); - } - else if(Status.MPI_TAG == MPI_TAG_END) - { - MPI_Recv(NULL, 0, MPI_BYTE, 0, MPI_TAG_END, MPI_COMM_WORLD, &Status); - /* printf("exiting..., task: %d\n", nID); - fflush(stdout);*/ - break; + + fflush(stdout); + memset(outBuff, 0, OUTBUFF_SIZE); + outBuffOffset = 0; + + MPI_Send(&diffs, sizeof(diffs), MPI_BYTE, 0, MPI_TAG_TOK_RETURN, MPI_COMM_WORLD); } else - { - printf("ph5diff_worker: ERROR: invalid tag (%d) received\n", Status.MPI_TAG); - MPI_Abort(MPI_COMM_WORLD, 0); - } + MPI_Send(&diffs, sizeof(diffs), MPI_BYTE, 0, MPI_TAG_DONE, MPI_COMM_WORLD); + } + /* Check for leaving */ + else if(Status.MPI_TAG == MPI_TAG_END) + { + MPI_Recv(NULL, 0, MPI_BYTE, 0, MPI_TAG_END, MPI_COMM_WORLD, &Status); + break; + } + else + { + printf("ph5diff_worker: ERROR: invalid tag (%d) received\n", Status.MPI_TAG); + break; + } + } + + return; +} + +/*------------------------------------------------------------------------- + * Function: print_manager_output + * + * Purpose: special function that prints any output accumulated by the + * manager task. + * + * Return: none + * + * Programmer: Leon Arber + * + * Date: Feb 7, 2005 + * + *------------------------------------------------------------------------- + */ +void print_manager_output(void) +{ + /* If there was something we buffered, let's print it now */ + if( (outBuffOffset>0) && g_Parallel) + { + printf("%s", outBuff); + + if(overflow_file) + { + int tmp; + rewind(overflow_file); + while((tmp = getc(overflow_file)) >= 0) + putchar(tmp); + fclose(overflow_file); + overflow_file = NULL; } + + HDfflush(stdout); + HDmemset(outBuff, 0, OUTBUFF_SIZE); + outBuffOffset = 0; + } + else if( (outBuffOffset>0) && !g_Parallel) + { + HDfprintf(stderr, "h5diff error: outBuffOffset>0, but we're not in parallel!\n"); } } @@ -268,12 +312,14 @@ ph5diff_worker(int nID) void h5diff_exit(int status) { /* if in parallel mode, dismiss workers, close down MPI, then exit */ - if((g_nTasks > 1) && g_Parallel) { - phdiff_dismiss_workers(); - MPI_Barrier(MPI_COMM_WORLD); - } - if(g_Parallel) + if(g_Parallel) { + if(g_nTasks > 1) { + phdiff_dismiss_workers(); + MPI_Barrier(MPI_COMM_WORLD); + } MPI_Finalize(); + status = EXIT_SUCCESS; /* Reset exit status, since some mpiexec commands generate output on failure status */ + } /* Always exit(0), since MPI implementations do weird stuff when they * receive a non-zero exit value. - QAK diff --git a/tools/h5dump/CMakeTests.cmake b/tools/h5dump/CMakeTests.cmake index 6edc9e4..9626183 100644 --- a/tools/h5dump/CMakeTests.cmake +++ b/tools/h5dump/CMakeTests.cmake @@ -101,6 +101,7 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tindicessub3.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tindicessub4.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tindicesyes.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/tintsattrs.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tlarge_objname.ddl #${HDF5_TOOLS_SRC_DIR}/testfiles/tldouble.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tlonglinks.ddl @@ -120,9 +121,6 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tnoddlfile.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tno-subset.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tnullspace.ddl - ${HDF5_TOOLS_SRC_DIR}/testfiles/trawdatafile.ddl - ${HDF5_TOOLS_SRC_DIR}/testfiles/trawssetfile.ddl - ${HDF5_TOOLS_SRC_DIR}/testfiles/zerodim.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tordergr1.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tordergr2.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tordergr3.ddl @@ -137,10 +135,15 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/torderlinks1.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/torderlinks2.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tperror.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/trawdatafile.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/trawssetfile.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/treadfilter.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/treadintfilter.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/treference.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tsaf.ddl - ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarintsize.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarattrintsize.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarintattrsize.ddl + ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarintsize.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarstring.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tscaleoffset.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/tshuffle.ddl @@ -168,6 +171,7 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/twithddlfile.ddl ${HDF5_TOOLS_SRC_DIR}/testfiles/h5dump-help.txt ${HDF5_TOOLS_SRC_DIR}/testfiles/out3.h5import + ${HDF5_TOOLS_SRC_DIR}/testfiles/zerodim.ddl ) SET (HDF5_REFERENCE_EXP_FILES tall-6.exp @@ -237,6 +241,7 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tgrp_comments.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/thlink.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/thyperslab.h5 + ${HDF5_TOOLS_SRC_DIR}/testfiles/tintsattrs.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tlarge_objname.h5 #${HDF5_TOOLS_SRC_DIR}/testfiles/tldouble.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tlonglinks.h5 @@ -252,12 +257,12 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tnestedcmpddt.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tno-subset.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tnullspace.h5 - ${HDF5_TOOLS_SRC_DIR}/testfiles/zerodim.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/torderattr.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tordergr.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tsaf.h5 - ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarintsize.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarattrintsize.h5 + ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarintattrsize.h5 + ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarintsize.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tscalarstring.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tslink.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tsplit_file-m.h5 @@ -273,6 +278,7 @@ ${HDF5_TOOLS_SRC_DIR}/testfiles/tvldtypes5.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tvlstr.h5 ${HDF5_TOOLS_SRC_DIR}/testfiles/tvms.h5 + ${HDF5_TOOLS_SRC_DIR}/testfiles/zerodim.h5 ) SET (HDF5_ERROR_REFERENCE_TEST_FILES ${PROJECT_SOURCE_DIR}/errfiles/filter_fail.err @@ -297,6 +303,7 @@ ${PROJECT_SOURCE_DIR}/errfiles/torderlinks2.err ${PROJECT_SOURCE_DIR}/errfiles/tgroup-2.err ${PROJECT_SOURCE_DIR}/errfiles/tperror.err + ${PROJECT_SOURCE_DIR}/errfiles/treadfilter.err ${PROJECT_SOURCE_DIR}/errfiles/tslink-D.err ) @@ -901,6 +908,8 @@ texceedsubblock.out.err tindicesyes.out tindicesyes.out.err + tintsattrs.out + tintsattrs.out.err tlarge_objname.out tlarge_objname.out.err tldouble.out @@ -919,12 +928,12 @@ # tstarfile.out.err tnamed_dtype_attr.out tnamed_dtype_attr.out.err + tnbit.out + tnbit.out.err tnestcomp-1.out tnestcomp-1.out.err tnestedcmpddt.out tnestedcmpddt.out.err - tnbit.out - tnbit.out.err tnoattrdata.out tnoattrdata.out.err tnoattrddl.out @@ -935,18 +944,10 @@ tnoddl.out.err tnoddlfile.out tnoddlfile.out.err - trawdatafile.out - trawdatafile.out.err - trawdatafile.txt - trawssetfile.out - trawssetfile.out.err - trawssetfile.txt tno-subset.out tno-subset.out.err tnullspace.out tnullspace.out.err - zerodim.out - zerodim.out.err tordergr1.out tordergr1.out.err tordergr2.out @@ -975,14 +976,26 @@ torderlinks2.out.err tperror.out tperror.out.err + trawdatafile.out + trawdatafile.out.err + trawdatafile.txt + trawssetfile.out + trawssetfile.out.err + trawssetfile.txt + treadfilter.out + treadfilter.out.err + treadintfilter.out + treadintfilter.out.err treference.out treference.out.err tsaf.out tsaf.out.err - tscalarintsize.out - tscalarintsize.out.err tscalarattrintsize.out tscalarattrintsize.out.err + tscalarintattrsize.out + tscalarintattrsize.out.err + tscalarintsize.out + tscalarintsize.out.err tscalarstring.out tscalarstring.out.err tscaleoffset.out @@ -1037,6 +1050,8 @@ twithddlfile.out twithddlfile.out.err twithddlfile.txt + zerodim.out + zerodim.out.err ) SET_TESTS_PROPERTIES (H5DUMP-clearall-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std") IF (NOT "${last_test}" STREQUAL "") @@ -1079,6 +1094,10 @@ ADD_H5_TEST (tscalarattrintsize 0 --enable-error-stack tscalarattrintsize.h5) # test for string scalar dataset and attribute ADD_H5_TEST (tscalarstring 0 --enable-error-stack tscalarstring.h5) + # test for signed/unsigned scalar datasets with attributes + ADD_H5_TEST (tscalarintattrsize 0 --enable-error-stack tscalarintattrsize.h5) + # test for signed/unsigned datasets attributes + ADD_H5_TEST (tintsattrs 0 --enable-error-stack tintsattrs.h5) # test for displaying groups ADD_H5_TEST (tgroup-1 0 --enable-error-stack tgroup.h5) # test for displaying the selected groups @@ -1302,6 +1321,45 @@ # user defined ADD_H5_TEST (tuserfilter 0 --enable-error-stack -H -p -d myfilter tfilters.h5) + +# See which filters are usable (and skip tests for filters we +# don't have). Do this by searching H5pubconf.h to see which +# filters are defined. + +# detect whether the encoder is present. + IF (H5_HAVE_FILTER_DEFLATE) + SET (USE_FILTER_DEFLATE "true") + ENDIF (H5_HAVE_FILTER_DEFLATE) + + IF (H5_HAVE_FILTER_SZIP) + SET (USE_FILTER_SZIP "true") + ENDIF (H5_HAVE_FILTER_SZIP) + + IF (H5_HAVE_FILTER_SHUFFLE) + SET (USE_FILTER_SHUFFLE "true") + ENDIF (H5_HAVE_FILTER_SHUFFLE) + + IF (H5_HAVE_FILTER_FLETCHER32) + SET (USE_FILTER_FLETCHER32 "true") + ENDIF (H5_HAVE_FILTER_FLETCHER32) + + IF (H5_HAVE_FILTER_NBIT) + SET (USE_FILTER_NBIT "true") + ENDIF (H5_HAVE_FILTER_NBIT) + + IF (H5_HAVE_FILTER_SCALEOFFSET) + SET (USE_FILTER_SCALEOFFSET "true") + ENDIF (H5_HAVE_FILTER_SCALEOFFSET) + + IF (USE_FILTER_DEFLATE AND USE_FILTER_SHUFFLE AND USE_FILTER_FLETCHER32 AND USE_FILTER_NBIT AND USE_FILTER_SCALEOFFSET) + # data read internal filters + ADD_H5_TEST (treadintfilter 0 --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5) + IF (HDF5_ENABLE_SZIP_SUPPORT) + # data read all filters + ADD_H5ERR_MASK_TEST (treadfilter 1 --enable-error-stack tfilters.h5) + ENDIF (HDF5_ENABLE_SZIP_SUPPORT) + ENDIF (USE_FILTER_DEFLATE AND USE_FILTER_SHUFFLE AND USE_FILTER_FLETCHER32 AND USE_FILTER_NBIT AND USE_FILTER_SCALEOFFSET) + # test for displaying objects with very long names ADD_H5_TEST (tlonglinks 0 --enable-error-stack tlonglinks.h5) diff --git a/tools/h5dump/errfiles/treadfilter.err b/tools/h5dump/errfiles/treadfilter.err new file mode 100644 index 0000000..9f3fe31 --- /dev/null +++ b/tools/h5dump/errfiles/treadfilter.err @@ -0,0 +1,59 @@ +HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): + #000: (file name) line (number) in H5Dread(): can't read data + major: Dataset + minor: Read failed + #001: (file name) line (number) in H5D__read(): can't read data + major: Dataset + minor: Read failed + #002: (file name) line (number) in H5D__contig_read(): contiguous read failed + major: Dataset + minor: Read failed + #003: (file name) line (number) in H5D__select_read(): read error + major: Dataspace + minor: Read failed + #004: (file name) line (number) in H5D__select_io(): read error + major: Dataspace + minor: Read failed + #005: (file name) line (number) in H5D__efl_readvv(): can't perform vectorized EFL read + major: Dataset + minor: Can't operate on object + #006: (file name) line (number) in H5V_opvv(): can't perform operation + major: Internal error (too specific to document in detail) + minor: Can't operate on object + #007: (file name) line (number) in H5D__efl_readvv_cb(): EFL read failed + major: Dataset + minor: Read failed + #008: (file name) line (number) in H5D__efl_read(): unable to open external raw data file + major: External file list + minor: Unable to open file +h5dump error: unable to print data +HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): + #000: (file name) line (number) in H5Dread(): can't read data + major: Dataset + minor: Read failed + #001: (file name) line (number) in H5D__read(): can't read data + major: Dataset + minor: Read failed + #002: (file name) line (number) in H5D__chunk_read(): unable to read raw data chunk + major: Low-level I/O + minor: Read failed + #003: (file name) line (number) in H5D__chunk_lock(): data pipeline read failed + major: Data filters + minor: Filter operation failed + #004: (file name) line (number) in H5Z_pipeline(): required filter 'myfilter' is not registered + major: Data filters + minor: Read failed + #005: (file name) line (number) in H5PL_load(): search in paths failed + major: Plugin for dynamically loaded library + minor: Can't get value + #006: (file name) line (number) in H5PL__find(): can't open directory + major: Plugin for dynamically loaded library + minor: Can't open directory or file +h5dump error: unable to print data +H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): + #000: (file name) line (number) in h5tools_dump_simple_dset(): H5Dread failed + major: Failure in tools library + minor: error in function + #001: (file name) line (number) in h5tools_dump_simple_dset(): H5Dread failed + major: Failure in tools library + minor: error in function diff --git a/tools/h5dump/h5dumpgentest.c b/tools/h5dump/h5dumpgentest.c index f3a78fc..fd28941 100644 --- a/tools/h5dump/h5dumpgentest.c +++ b/tools/h5dump/h5dumpgentest.c @@ -108,6 +108,8 @@ #define FILE75 "tscalarstring.h5" #define FILE76 "tcmpdintarray.h5" #define FILE77 "tcmpdints.h5" +#define FILE78 "tscalarintattrsize.h5" +#define FILE79 "tintsattrs.h5" /*------------------------------------------------------------------------- * prototypes @@ -317,7 +319,7 @@ typedef struct s1_t { /* Name of dataset to create in datafile */ #define F71_DATASETNAME "CompoundAttrIntSize" -/* "FILE73" macros and for FILE69 */ +/* "FILE73" macros and for FILE69 and FILE78 */ #define F73_ARRAY_RANK 2 #define F73_XDIM 8 #define F73_DATASETU08 "DU08BITS" @@ -9165,6 +9167,509 @@ static void gent_compound_ints(void) { } /*------------------------------------------------------------------------- + * Function: gent_intscalars + * + * Purpose: Generate a file to be used in the h5dump scalar with attribute tests. + * Four datasets of 1, 2, 4 and 8 bytes of unsigned int types are created. + * Four more datasets of 1, 2, 4 and 8 bytes of signed int types are created. + * Fill them with raw data such that no bit will be all zero in a dataset. + * A dummy dataset of double type is created for failure test. + *------------------------------------------------------------------------- + */ +static void +gent_intattrscalars(void) +{ + hid_t fid, attr, dataset, space, tid; + hsize_t dims[2]; + uint8_t dsetu8[F73_XDIM][F73_YDIM8], valu8bits; + uint16_t dsetu16[F73_XDIM][F73_YDIM16], valu16bits; + uint32_t dsetu32[F73_XDIM][F73_YDIM32], valu32bits; + uint64_t dsetu64[F73_XDIM][F73_YDIM64], valu64bits; + int8_t dset8[F73_XDIM][F73_YDIM8], val8bits; + int16_t dset16[F73_XDIM][F73_YDIM16], val16bits; + int32_t dset32[F73_XDIM][F73_YDIM32], val32bits; + int64_t dset64[F73_XDIM][F73_YDIM64], val64bits; + double dsetdbl[F73_XDIM][F73_YDIM8]; + unsigned int i, j; + + fid = H5Fcreate(FILE78, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + + /* Dataset of 8 bits unsigned int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM8; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_U8LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETU08, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu8bits = (uint8_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu8[i][0] = valu8bits; + for(j = 1; j < dims[1]; j++) { + dsetu8[i][j] = dsetu8[i][j-1] << 1; + } + valu8bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); + /* Attribute of 8 bits unsigned int */ + attr = H5Acreate2(dataset, F73_DATASETU08, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dsetu8); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 16 bits unsigned int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM16; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_U16LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETU16, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu16bits = (uint16_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu16[i][0] = valu16bits; + for(j = 1; j < dims[1]; j++) { + dsetu16[i][j] = dsetu16[i][j-1] << 1; + } + valu16bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); + /* Attribute of 16 bits unsigned int */ + attr = H5Acreate2(dataset, F73_DATASETU16, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dsetu16); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 32 bits unsigned int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM32; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_U32LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETU32, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu32bits = (uint32_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu32[i][0] = valu32bits; + for(j = 1; j < dims[1]; j++) { + dsetu32[i][j] = dsetu32[i][j-1] << 1; + } + valu32bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); + /* Attribute of 32 bits unsigned int */ + attr = H5Acreate2(dataset, F73_DATASETU32, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dsetu32); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 64 bits unsigned int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM64; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_U64LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETU64, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu64bits = (uint64_t) ~0Lu; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu64[i][0] = valu64bits; + for(j = 1; j < dims[1]; j++) { + dsetu64[i][j] = dsetu64[i][j-1] << 1; + } + valu64bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); + /* Attribute of 64 bits unsigned int */ + attr = H5Acreate2(dataset, F73_DATASETU64, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dsetu64); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 8 bits signed int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM8; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_I8LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETS08, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val8bits = (int8_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset8[i][0] = val8bits; + for(j = 1; j < dims[1]; j++) { + dset8[i][j] = dset8[i][j-1] << 1; + } + val8bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); + /* Attribute of 8 bits signed int */ + attr = H5Acreate2(dataset, F73_DATASETS08, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dset8); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 16 bits signed int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM16; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_I16LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETS16, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val16bits = (int16_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset16[i][0] = val16bits; + for(j = 1; j < dims[1]; j++) { + dset16[i][j] = dset16[i][j-1] << 1; + } + val16bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); + /* Attribute of 16 bits signed int */ + attr = H5Acreate2(dataset, F73_DATASETS16, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dset16); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 32 bits signed int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM32; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_I32LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETS32, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val32bits = (int32_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset32[i][0] = val32bits; + for(j = 1; j < dims[1]; j++) { + dset32[i][j] = dset32[i][j-1] << 1; + } + val32bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); + /* Attribute of 32 bits signed int */ + attr = H5Acreate2(dataset, F73_DATASETS32, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dset32); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 64 bits signed int */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM64; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_STD_I64LE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DATASETS64, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val64bits = (int64_t) ~0L; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset64[i][0] = val64bits; + for(j = 1; j < dims[1]; j++) { + dset64[i][j] = dset64[i][j-1] << 1; + } + val64bits <<= 1; + } + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); + /* Attribute of 64 bits signed int */ + attr = H5Acreate2(dataset, F73_DATASETS64, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dset64); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + + /* Double Dummy set for failure tests */ + dims[0] = F73_XDIM; dims[1] = F73_YDIM8; + space = H5Screate(H5S_SCALAR); + tid = H5Tarray_create2(H5T_NATIVE_DOUBLE, F73_ARRAY_RANK, dims); + dataset = H5Dcreate2(fid, F73_DUMMYDBL, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + for(i = 0; i < dims[0]; i++) + for(j = 0; j < dims[1]; j++) + dsetdbl[i][j] = 0.0001 * j + i; + + H5Dwrite(dataset, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); + /* Attribute of double */ + attr = H5Acreate2(dataset, F73_DUMMYDBL, tid, space, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, tid, dsetdbl); + H5Aclose(attr); + H5Sclose(space); + H5Dclose(dataset); + H5Fclose(fid); +} + +/*------------------------------------------------------------------------- + * Function: gent_packedbits + * + * Purpose: Generate a file to be used in the h5dump packed bits tests. + * Four datasets of 1, 2, 4 and 8 bytes of unsigned int types are created. + * Four more datasets of 1, 2, 4 and 8 bytes of signed int types are created. + * Fill them with raw data such that no bit will be all zero in a dataset. + * A dummy dataset of double type is created for failure test. + * Created: Albert Cheng, 2010/5/10. + * Modified: Allen Byrne, 2011/1/5 Use file to test Signed/Unsigned datatypes + *------------------------------------------------------------------------- + */ +static void +gent_intsattrs(void) +{ + hid_t fid, attr, dataset, space, aspace; + hsize_t dims[2], adims[1]; + uint8_t dsetu8[F66_XDIM][F66_YDIM8], asetu8[F66_XDIM*F66_YDIM8], valu8bits; + uint16_t dsetu16[F66_XDIM][F66_YDIM16], asetu16[F66_XDIM*F66_YDIM16], valu16bits; + uint32_t dsetu32[F66_XDIM][F66_YDIM32], asetu32[F66_XDIM*F66_YDIM32], valu32bits; + uint64_t dsetu64[F66_XDIM][F66_YDIM64], asetu64[F66_XDIM*F66_YDIM64], valu64bits; + int8_t dset8[F66_XDIM][F66_YDIM8], aset8[F66_XDIM*F66_YDIM8], val8bits; + int16_t dset16[F66_XDIM][F66_YDIM16], aset16[F66_XDIM*F66_YDIM16], val16bits; + int32_t dset32[F66_XDIM][F66_YDIM32], aset32[F66_XDIM*F66_YDIM32], val32bits; + int64_t dset64[F66_XDIM][F66_YDIM64], aset64[F66_XDIM*F66_YDIM64], val64bits; + double dsetdbl[F66_XDIM][F66_YDIM8], asetdbl[F66_XDIM*F66_YDIM8]; + unsigned int i, j; + + fid = H5Fcreate(FILE79, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + + /* Dataset of 8 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM8; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETU08, H5T_STD_U8LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu8bits = (uint8_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu8[i][0] = valu8bits; + asetu8[i*dims[1]] = dsetu8[i][0]; + for(j = 1; j < dims[1]; j++) { + dsetu8[i][j] = dsetu8[i][j-1] << 1; + asetu8[i*dims[1]+j] = dsetu8[i][j]; + } + valu8bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_UINT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu8); + /* Attribute of 8 bits unsigned int */ + adims[0] = F66_XDIM * F66_YDIM8; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETU08, H5T_STD_U8LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_UINT8, asetu8); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 16 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM16; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETU16, H5T_STD_U16LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu16bits = (uint16_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu16[i][0] = valu16bits; + asetu16[i*dims[1]] = dsetu16[i][0]; + for(j = 1; j < dims[1]; j++) { + dsetu16[i][j] = dsetu16[i][j-1] << 1; + asetu16[i*dims[1]+j] = dsetu16[i][j]; + } + valu16bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_UINT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu16); + /* Attribute of 16 bits unsigned int */ + adims[0] = F66_XDIM * F66_YDIM16; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETU16, H5T_STD_U16LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_UINT16, asetu16); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 32 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM32; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETU32, H5T_STD_U32LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu32bits = (uint32_t) ~0u; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu32[i][0] = valu32bits; + asetu32[i*dims[1]] = dsetu32[i][0]; + for(j = 1; j < dims[1]; j++) { + dsetu32[i][j] = dsetu32[i][j-1] << 1; + asetu32[i*dims[1]+j] = dsetu32[i][j]; + } + valu32bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_UINT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu32); + /* Attribute of 32 bits unsigned int */ + adims[0] = F66_XDIM * F66_YDIM32; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETU32, H5T_STD_U32LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_UINT32, asetu32); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 64 bits unsigned int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM64; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETU64, H5T_STD_U64LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + valu64bits = (uint64_t) ~0Lu; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dsetu64[i][0] = valu64bits; + asetu64[i*dims[1]] = dsetu64[i][0]; + for(j = 1; j < dims[1]; j++) { + dsetu64[i][j] = dsetu64[i][j-1] << 1; + asetu64[i*dims[1]+j] = dsetu64[i][j]; + } + valu64bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_UINT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetu64); + /* Attribute of 64 bits unsigned int */ + adims[0] = F66_XDIM * F66_YDIM64; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETU64, H5T_STD_U64LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_UINT64, asetu64); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 8 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM8; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETS08, H5T_STD_I8LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val8bits = (int8_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset8[i][0] = val8bits; + aset8[i*dims[1]] = dset8[i][0]; + for(j = 1; j < dims[1]; j++) { + dset8[i][j] = dset8[i][j-1] << 1; + aset8[i*dims[1]+j] = dset8[i][j]; + } + val8bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_INT8, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset8); + /* Attribute of 8 bits signed int */ + adims[0] = F66_XDIM * F66_YDIM8; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETS08, H5T_STD_I8LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_INT8, aset8); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 16 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM16; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETS16, H5T_STD_I16LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val16bits = (int16_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset16[i][0] = val16bits; + aset16[i*dims[1]] = dset16[i][0]; + for(j = 1; j < dims[1]; j++) { + dset16[i][j] = dset16[i][j-1] << 1; + aset16[i*dims[1]+j] = dset16[i][j]; + } + val16bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_INT16, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset16); + /* Attribute of 16 bits signed int */ + adims[0] = F66_XDIM * F66_YDIM16; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETS16, H5T_STD_I16LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_INT16, aset16); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 32 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM32; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETS32, H5T_STD_I32LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val32bits = (int32_t) ~0; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset32[i][0] = val32bits; + aset32[i*dims[1]] = dset32[i][0]; + for(j = 1; j < dims[1]; j++) { + dset32[i][j] = dset32[i][j-1] << 1; + aset32[i*dims[1]+j] = dset32[i][j]; + } + val32bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_INT32, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset32); + /* Attribute of 32 bits signed int */ + adims[0] = F66_XDIM * F66_YDIM32; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETS32, H5T_STD_I32LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_INT32, aset32); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Dataset of 64 bits signed int */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM64; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DATASETS64, H5T_STD_I64LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + val64bits = (int64_t) ~0L; /* all 1s */ + for(i = 0; i < dims[0]; i++){ + dset64[i][0] = val64bits; + aset64[i*dims[1]] = dset64[i][0]; + for(j = 1; j < dims[1]; j++) { + dset64[i][j] = dset64[i][j-1] << 1; + aset64[i*dims[1]+j] = dset64[i][j]; + } + val64bits <<= 1; + } + + H5Dwrite(dataset, H5T_NATIVE_INT64, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset64); + /* Attribute of 64 bits signed int */ + adims[0] = F66_XDIM * F66_YDIM64; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DATASETS64, H5T_STD_I64LE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_INT64, aset64); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + + /* Double Dummy set for failure tests */ + dims[0] = F66_XDIM; dims[1] = F66_YDIM8; + space = H5Screate_simple(2, dims, NULL); + dataset = H5Dcreate2(fid, F66_DUMMYDBL, H5T_IEEE_F64BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + + for(i = 0; i < dims[0]; i++) + for(j = 0; j < dims[1]; j++) { + dsetdbl[i][j] = 0.0001 * j + i; + asetdbl[i*dims[1]+j] = dsetdbl[i][j]; + } + + H5Dwrite(dataset, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, dsetdbl); + /* Attribute of double */ + adims[0] = F66_XDIM * F66_YDIM8; + aspace = H5Screate_simple(1, adims, NULL); + attr = H5Acreate2(dataset, F66_DUMMYDBL, H5T_IEEE_F64BE, aspace, H5P_DEFAULT, H5P_DEFAULT); + H5Awrite(attr, H5T_NATIVE_DOUBLE, asetdbl); + H5Aclose(attr); + H5Sclose(aspace); + H5Sclose(space); + H5Dclose(dataset); + H5Fclose(fid); +} + + +/*------------------------------------------------------------------------- * Function: main * *------------------------------------------------------------------------- @@ -9252,6 +9757,8 @@ int main(void) gent_string_scalars(); gent_compound_int_array(); gent_compound_ints(); + gent_intattrscalars(); + gent_intsattrs(); return 0; } diff --git a/tools/h5dump/testh5dump.sh.in b/tools/h5dump/testh5dump.sh.in index dc52469..88711c7 100644 --- a/tools/h5dump/testh5dump.sh.in +++ b/tools/h5dump/testh5dump.sh.in @@ -17,6 +17,13 @@ srcdir=@srcdir@ +USE_FILTER_SZIP="@USE_FILTER_SZIP@" +USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@" +USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@" +USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@" +USE_FILTER_NBIT="@USE_FILTER_NBIT@" +USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@" + TESTNAME=h5dump EXIT_SUCCESS=0 EXIT_FAILURE=1 @@ -129,6 +136,7 @@ $SRC_H5DUMP_TESTFILES/tgroup.h5 $SRC_H5DUMP_TESTFILES/tgrp_comments.h5 $SRC_H5DUMP_TESTFILES/thlink.h5 $SRC_H5DUMP_TESTFILES/thyperslab.h5 +$SRC_H5DUMP_TESTFILES/tintsattrs.h5 $SRC_H5DUMP_TESTFILES/tlarge_objname.h5 #$SRC_H5DUMP_TESTFILES/tldouble.h5 $SRC_H5DUMP_TESTFILES/tlonglinks.h5 @@ -148,8 +156,9 @@ $SRC_H5DUMP_TESTFILES/zerodim.h5 $SRC_H5DUMP_TESTFILES/torderattr.h5 $SRC_H5DUMP_TESTFILES/tordergr.h5 $SRC_H5DUMP_TESTFILES/tsaf.h5 -$SRC_H5DUMP_TESTFILES/tscalarintsize.h5 $SRC_H5DUMP_TESTFILES/tscalarattrintsize.h5 +$SRC_H5DUMP_TESTFILES/tscalarintattrsize.h5 +$SRC_H5DUMP_TESTFILES/tscalarintsize.h5 $SRC_H5DUMP_TESTFILES/tscalarstring.h5 $SRC_H5DUMP_TESTFILES/tslink.h5 $SRC_H5DUMP_TESTFILES/tsplit_file-m.h5 @@ -259,6 +268,7 @@ $SRC_H5DUMP_TESTFILES/tindicessub2.ddl $SRC_H5DUMP_TESTFILES/tindicessub3.ddl $SRC_H5DUMP_TESTFILES/tindicessub4.ddl $SRC_H5DUMP_TESTFILES/tindicesyes.ddl +$SRC_H5DUMP_TESTFILES/tintsattrs.ddl $SRC_H5DUMP_TESTFILES/tlarge_objname.ddl #$SRC_H5DUMP_TESTFILES/tldouble.ddl $SRC_H5DUMP_TESTFILES/tlonglinks.ddl @@ -298,10 +308,13 @@ $SRC_H5DUMP_TESTFILES/tordercontents2.ddl $SRC_H5DUMP_TESTFILES/torderlinks1.ddl $SRC_H5DUMP_TESTFILES/torderlinks2.ddl $SRC_H5DUMP_TESTFILES/tperror.ddl +$SRC_H5DUMP_TESTFILES/treadfilter.ddl +$SRC_H5DUMP_TESTFILES/treadintfilter.ddl $SRC_H5DUMP_TESTFILES/treference.ddl $SRC_H5DUMP_TESTFILES/tsaf.ddl -$SRC_H5DUMP_TESTFILES/tscalarintsize.ddl $SRC_H5DUMP_TESTFILES/tscalarattrintsize.ddl +$SRC_H5DUMP_TESTFILES/tscalarintattrsize.ddl +$SRC_H5DUMP_TESTFILES/tscalarintsize.ddl $SRC_H5DUMP_TESTFILES/tscalarstring.ddl $SRC_H5DUMP_TESTFILES/tscaleoffset.ddl $SRC_H5DUMP_TESTFILES/tshuffle.ddl @@ -359,6 +372,7 @@ ${SRC_H5DUMP_ERRORFILES}/tgroup-2.err ${SRC_H5DUMP_ERRORFILES}/torderlinks1.err ${SRC_H5DUMP_ERRORFILES}/torderlinks2.err ${SRC_H5DUMP_ERRORFILES}/tperror.err +${SRC_H5DUMP_ERRORFILES}/treadfilter.err ${SRC_H5DUMP_ERRORFILES}/tqmarkfile.err ${SRC_H5DUMP_ERRORFILES}/tslink-D.err " @@ -947,6 +961,10 @@ TOOLTEST tattrintsize.ddl --enable-error-stack tattrintsize.h5 TOOLTEST tcmpdattrintsize.ddl --enable-error-stack tcmpdattrintsize.h5 # test for signed/unsigned scalar attributes TOOLTEST tscalarattrintsize.ddl --enable-error-stack tscalarattrintsize.h5 +# test for signed/unsigned scalar datasets with attributes +TOOLTEST tscalarintattrsize.ddl --enable-error-stack tscalarintattrsize.h5 +# test for signed/unsigned datasets attributes +TOOLTEST tintsattrs.ddl --enable-error-stack tintsattrs.h5 # test for string scalar dataset attribute TOOLTEST tscalarstring.ddl --enable-error-stack tscalarstring.h5 # test for displaying groups @@ -1167,6 +1185,15 @@ TOOLTEST tallfilters.ddl --enable-error-stack -H -p -d all tfilters.h5 # user defined TOOLTEST tuserfilter.ddl --enable-error-stack -H -p -d myfilter tfilters.h5 +if test $USE_FILTER_DEFLATE = "yes" -a $USE_FILTER_SHUFFLE = "yes" -a $USE_FILTER_FLETCHER32 = "yes" -a $USE_FILTER_NBIT = "yes" -a $USE_FILTER_SCALEOFFSET = "yes" ; then + # data read internal filters + TOOLTEST treadintfilter.ddl --enable-error-stack -d deflate -d shuffle -d fletcher32 -d nbit -d scaleoffset tfilters.h5 + if test $USE_FILTER_SZIP = "yes"; then + # data read + TOOLTEST4 treadfilter.ddl --enable-error-stack tfilters.h5 + fi +fi + # test for displaying objects with very long names TOOLTEST tlonglinks.ddl --enable-error-stack tlonglinks.h5 diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c index 541525d..ab21bfd 100644 --- a/tools/lib/h5diff.c +++ b/tools/lib/h5diff.c @@ -106,47 +106,6 @@ void phdiff_dismiss_workers(void) /*------------------------------------------------------------------------- - * Function: print_manager_output - * - * Purpose: special function that prints any output accumulated by the - * manager task. - * - * Return: none - * - * Programmer: Leon Arber - * - * Date: Feb 7, 2005 - * - *------------------------------------------------------------------------- - */ -void print_manager_output(void) -{ - /* If there was something we buffered, let's print it now */ - if( (outBuffOffset>0) && g_Parallel) - { - printf("%s", outBuff); - - if(overflow_file) - { - int tmp; - rewind(overflow_file); - while((tmp = getc(overflow_file)) >= 0) - putchar(tmp); - fclose(overflow_file); - overflow_file = NULL; - } - - HDfflush(stdout); - HDmemset(outBuff, 0, OUTBUFF_SIZE); - outBuffOffset = 0; - } - else if( (outBuffOffset>0) && !g_Parallel) - { - HDfprintf(stderr, "h5diff error: outBuffOffset>0, but we're not in parallel!\n"); - } -} - -/*------------------------------------------------------------------------- * Function: print_incoming_data * * Purpose: special function that prints any output that has been sent to the manager diff --git a/tools/lib/ph5diff.h b/tools/lib/ph5diff.h index becbd6c..2a75228 100644 --- a/tools/lib/ph5diff.h +++ b/tools/lib/ph5diff.h @@ -17,18 +17,18 @@ #define _PH5DIFF_H__ /* Send from manager to workers */ -#define MPI_TAG_ARGS 1 -#define MPI_TAG_PRINT_TOK 2 +#define MPI_TAG_ARGS 1 +#define MPI_TAG_PRINT_TOK 2 /*Sent from workers to manager */ -#define MPI_TAG_TOK_REQUEST 3 -#define MPI_TAG_DONE 4 -#define MPI_TAG_TOK_RETURN 5 -#define MPI_TAG_PRINT_DATA 6 +#define MPI_TAG_TOK_REQUEST 3 +#define MPI_TAG_DONE 4 +#define MPI_TAG_TOK_RETURN 5 +#define MPI_TAG_PRINT_DATA 6 /* Operational tags used to init and complete diff */ -#define MPI_TAG_END 7 -#define MPI_TAG_PARALLEL 8 +#define MPI_TAG_END 7 +#define MPI_TAG_PARALLEL 8 struct diff_mpi_args { diff --git a/tools/testfiles/tcontiguos.ddl b/tools/testfiles/tcontiguos.ddl index bda7ef7..8e0158e 100644 --- a/tools/testfiles/tcontiguos.ddl +++ b/tools/testfiles/tcontiguos.ddl @@ -6,7 +6,7 @@ COMMENT "This is a dataset with contiguous storage" STORAGE_LAYOUT { CONTIGUOUS SIZE 800 - OFFSET 4096 + OFFSET 2472 } FILTERS { NONE diff --git a/tools/testfiles/tfilters.h5 b/tools/testfiles/tfilters.h5 index c28b1b1..7c33e55 100644 Binary files a/tools/testfiles/tfilters.h5 and b/tools/testfiles/tfilters.h5 differ diff --git a/tools/testfiles/tintsattrs.ddl b/tools/testfiles/tintsattrs.ddl new file mode 100644 index 0000000..b1f1cdf --- /dev/null +++ b/tools/testfiles/tintsattrs.ddl @@ -0,0 +1,1115 @@ +HDF5 "tintsattrs.h5" { +GROUP "/" { + DATASET "DS08BITS" { + DATATYPE H5T_STD_I8LE + DATASPACE SIMPLE { ( 8, 8 ) / ( 8, 8 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, + (1,0): -2, -4, -8, -16, -32, -64, -128, 0, + (2,0): -4, -8, -16, -32, -64, -128, 0, 0, + (3,0): -8, -16, -32, -64, -128, 0, 0, 0, + (4,0): -16, -32, -64, -128, 0, 0, 0, 0, + (5,0): -32, -64, -128, 0, 0, 0, 0, 0, + (6,0): -64, -128, 0, 0, 0, 0, 0, 0, + (7,0): -128, 0, 0, 0, 0, 0, 0, 0 + } + ATTRIBUTE "DS08BITS" { + DATATYPE H5T_STD_I8LE + DATASPACE SIMPLE { ( 64 ) / ( 64 ) } + DATA { + (0): -1, -2, -4, -8, -16, -32, -64, -128, -2, -4, -8, -16, -32, -64, + (14): -128, 0, -4, -8, -16, -32, -64, -128, 0, 0, -8, -16, -32, -64, + (28): -128, 0, 0, 0, -16, -32, -64, -128, 0, 0, 0, 0, -32, -64, + (42): -128, 0, 0, 0, 0, 0, -64, -128, 0, 0, 0, 0, 0, 0, -128, 0, 0, + (59): 0, 0, 0, 0, 0 + } + } + } + DATASET "DS16BITS" { + DATATYPE H5T_STD_I16LE + DATASPACE SIMPLE { ( 8, 16 ) / ( 8, 16 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (0,12): -4096, -8192, -16384, -32768, + (1,0): -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (1,11): -4096, -8192, -16384, -32768, 0, + (2,0): -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, + (2,11): -8192, -16384, -32768, 0, 0, + (3,0): -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (3,11): -16384, -32768, 0, 0, 0, + (4,0): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (4,10): -16384, -32768, 0, 0, 0, 0, + (5,0): -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (5,10): -32768, 0, 0, 0, 0, 0, + (6,0): -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (6,9): -32768, 0, 0, 0, 0, 0, 0, + (7,0): -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, 0, + (7,10): 0, 0, 0, 0, 0, 0 + } + ATTRIBUTE "DS16BITS" { + DATATYPE H5T_STD_I16LE + DATASPACE SIMPLE { ( 128 ) / ( 128 ) } + DATA { + (0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (12): -4096, -8192, -16384, -32768, -2, -4, -8, -16, -32, -64, -128, + (23): -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, 0, -4, + (33): -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, + (43): -8192, -16384, -32768, 0, 0, -8, -16, -32, -64, -128, -256, + (54): -512, -1024, -2048, -4096, -8192, -16384, -32768, 0, 0, 0, + (64): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (74): -16384, -32768, 0, 0, 0, 0, -32, -64, -128, -256, -512, -1024, + (86): -2048, -4096, -8192, -16384, -32768, 0, 0, 0, 0, 0, -64, -128, + (98): -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, 0, 0, + (108): 0, 0, 0, 0, -128, -256, -512, -1024, -2048, -4096, -8192, + (119): -16384, -32768, 0, 0, 0, 0, 0, 0, 0 + } + } + } + DATASET "DS32BITS" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 8, 32 ) / ( 8, 32 ) } + DATA { + (0,0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (0,12): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (0,19): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (0,25): -33554432, -67108864, -134217728, -268435456, -536870912, + (0,30): -1073741824, -2147483648, + (1,0): -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (1,11): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (1,18): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (1,24): -33554432, -67108864, -134217728, -268435456, -536870912, + (1,29): -1073741824, -2147483648, 0, + (2,0): -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, + (2,11): -8192, -16384, -32768, -65536, -131072, -262144, -524288, + (2,18): -1048576, -2097152, -4194304, -8388608, -16777216, -33554432, + (2,24): -67108864, -134217728, -268435456, -536870912, -1073741824, + (2,29): -2147483648, 0, 0, + (3,0): -8, -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (3,11): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (3,18): -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, + (3,24): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (3,29): 0, 0, 0, + (4,0): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (4,10): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (4,17): -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, + (4,23): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (4,28): 0, 0, 0, 0, + (5,0): -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (5,10): -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, + (5,17): -4194304, -8388608, -16777216, -33554432, -67108864, + (5,22): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (5,27): 0, 0, 0, 0, 0, + (6,0): -64, -128, -256, -512, -1024, -2048, -4096, -8192, -16384, + (6,9): -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, + (6,16): -4194304, -8388608, -16777216, -33554432, -67108864, + (6,21): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (6,26): 0, 0, 0, 0, 0, 0, + (7,0): -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, + (7,9): -65536, -131072, -262144, -524288, -1048576, -2097152, -4194304, + (7,16): -8388608, -16777216, -33554432, -67108864, -134217728, + (7,21): -268435456, -536870912, -1073741824, -2147483648, 0, 0, 0, 0, + (7,29): 0, 0, 0 + } + ATTRIBUTE "DS32BITS" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 256 ) / ( 256 ) } + DATA { + (0): -1, -2, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (12): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (19): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (25): -33554432, -67108864, -134217728, -268435456, -536870912, + (30): -1073741824, -2147483648, -2, -4, -8, -16, -32, -64, -128, + (39): -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, + (47): -65536, -131072, -262144, -524288, -1048576, -2097152, + (53): -4194304, -8388608, -16777216, -33554432, -67108864, + (58): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (63): 0, -4, -8, -16, -32, -64, -128, -256, -512, -1024, -2048, + (74): -4096, -8192, -16384, -32768, -65536, -131072, -262144, + (81): -524288, -1048576, -2097152, -4194304, -8388608, -16777216, + (87): -33554432, -67108864, -134217728, -268435456, -536870912, + (92): -1073741824, -2147483648, 0, 0, -8, -16, -32, -64, -128, -256, + (102): -512, -1024, -2048, -4096, -8192, -16384, -32768, -65536, + (110): -131072, -262144, -524288, -1048576, -2097152, -4194304, + (116): -8388608, -16777216, -33554432, -67108864, -134217728, + (121): -268435456, -536870912, -1073741824, -2147483648, 0, 0, 0, + (128): -16, -32, -64, -128, -256, -512, -1024, -2048, -4096, -8192, + (138): -16384, -32768, -65536, -131072, -262144, -524288, -1048576, + (145): -2097152, -4194304, -8388608, -16777216, -33554432, + (150): -67108864, -134217728, -268435456, -536870912, -1073741824, + (155): -2147483648, 0, 0, 0, 0, -32, -64, -128, -256, -512, -1024, + (166): -2048, -4096, -8192, -16384, -32768, -65536, -131072, + (173): -262144, -524288, -1048576, -2097152, -4194304, -8388608, + (179): -16777216, -33554432, -67108864, -134217728, -268435456, + (184): -536870912, -1073741824, -2147483648, 0, 0, 0, 0, 0, -64, + (193): -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, + (202): -65536, -131072, -262144, -524288, -1048576, -2097152, + (208): -4194304, -8388608, -16777216, -33554432, -67108864, + (213): -134217728, -268435456, -536870912, -1073741824, -2147483648, + (218): 0, 0, 0, 0, 0, 0, -128, -256, -512, -1024, -2048, -4096, + (230): -8192, -16384, -32768, -65536, -131072, -262144, -524288, + (237): -1048576, -2097152, -4194304, -8388608, -16777216, -33554432, + (243): -67108864, -134217728, -268435456, -536870912, -1073741824, + (248): -2147483648, 0, 0, 0, 0, 0, 0, 0 + } + } + } + DATASET 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(3,0): 248, 240, 224, 192, 128, 0, 0, 0, + (4,0): 240, 224, 192, 128, 0, 0, 0, 0, + (5,0): 224, 192, 128, 0, 0, 0, 0, 0, + (6,0): 192, 128, 0, 0, 0, 0, 0, 0, + (7,0): 128, 0, 0, 0, 0, 0, 0, 0 + } + ATTRIBUTE "DU08BITS" { + DATATYPE H5T_STD_U8LE + DATASPACE SIMPLE { ( 64 ) / ( 64 ) } + DATA { + (0): 255, 254, 252, 248, 240, 224, 192, 128, 254, 252, 248, 240, + (12): 224, 192, 128, 0, 252, 248, 240, 224, 192, 128, 0, 0, 248, + (25): 240, 224, 192, 128, 0, 0, 0, 240, 224, 192, 128, 0, 0, 0, 0, + (40): 224, 192, 128, 0, 0, 0, 0, 0, 192, 128, 0, 0, 0, 0, 0, 0, 128, + (57): 0, 0, 0, 0, 0, 0, 0 + } + } + } + DATASET "DU16BITS" { + DATATYPE H5T_STD_U16LE + DATASPACE SIMPLE { ( 8, 16 ) / ( 8, 16 ) } + DATA { + (0,0): 65535, 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, + (0,9): 65024, 64512, 63488, 61440, 57344, 49152, 32768, + (1,0): 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, + (1,9): 64512, 63488, 61440, 57344, 49152, 32768, 0, + (2,0): 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, + (2,9): 63488, 61440, 57344, 49152, 32768, 0, 0, + (3,0): 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, + (3,9): 61440, 57344, 49152, 32768, 0, 0, 0, + (4,0): 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, + (4,9): 57344, 49152, 32768, 0, 0, 0, 0, + (5,0): 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, + (5,9): 49152, 32768, 0, 0, 0, 0, 0, + (6,0): 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, + (6,9): 32768, 0, 0, 0, 0, 0, 0, + (7,0): 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, + (7,9): 0, 0, 0, 0, 0, 0, 0 + } + ATTRIBUTE "DU16BITS" { + DATATYPE H5T_STD_U16LE + DATASPACE SIMPLE { ( 128 ) / ( 128 ) } + DATA { + (0): 65535, 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, + (9): 65024, 64512, 63488, 61440, 57344, 49152, 32768, 65534, 65532, + (18): 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, + (27): 61440, 57344, 49152, 32768, 0, 65532, 65528, 65520, 65504, + (36): 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, + (45): 32768, 0, 0, 65528, 65520, 65504, 65472, 65408, 65280, 65024, + (55): 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 65520, + (65): 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, + (74): 49152, 32768, 0, 0, 0, 0, 65504, 65472, 65408, 65280, 65024, + (85): 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, + (96): 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, + (105): 32768, 0, 0, 0, 0, 0, 0, 65408, 65280, 65024, 64512, 63488, + (117): 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, 0, 0 + } + } + } + DATASET "DU32BITS" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 8, 32 ) / ( 8, 32 ) } + DATA { + (0,0): 4294967295, 4294967294, 4294967292, 4294967288, 4294967280, + (0,5): 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, + (0,10): 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, + (0,15): 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, + (0,20): 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, + (0,25): 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, + (0,30): 3221225472, 2147483648, + (1,0): 4294967294, 4294967292, 4294967288, 4294967280, 4294967264, + (1,5): 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, + (1,10): 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, + (1,15): 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, + (1,20): 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, + (1,25): 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, + (1,30): 2147483648, 0, + (2,0): 4294967292, 4294967288, 4294967280, 4294967264, 4294967232, + (2,5): 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, + (2,10): 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, + (2,15): 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, + (2,20): 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, + (2,25): 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, + (2,31): 0, + (3,0): 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, + (3,5): 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, + (3,10): 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, + (3,15): 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, + (3,20): 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, + (3,25): 4026531840, 3758096384, 3221225472, 2147483648, 0, 0, 0, + (4,0): 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, + (4,5): 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, + (4,10): 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, + (4,15): 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, + (4,20): 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, + (4,25): 3758096384, 3221225472, 2147483648, 0, 0, 0, 0, + (5,0): 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, + (5,5): 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, + (5,10): 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, + (5,15): 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, + (5,20): 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, + (5,25): 3221225472, 2147483648, 0, 0, 0, 0, 0, + (6,0): 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, + (6,5): 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, + (6,10): 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, + (6,15): 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, + (6,20): 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, + (6,25): 2147483648, 0, 0, 0, 0, 0, 0, + (7,0): 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, + (7,5): 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, + (7,10): 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, + (7,15): 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, + (7,20): 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, + (7,26): 0, 0, 0, 0, 0, 0 + } + ATTRIBUTE "DU32BITS" { + DATATYPE H5T_STD_U32LE + DATASPACE SIMPLE { ( 256 ) / ( 256 ) } + DATA { + (0): 4294967295, 4294967294, 4294967292, 4294967288, 4294967280, + (5): 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, + (10): 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, + (15): 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, + (20): 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, + (25): 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, + (30): 3221225472, 2147483648, 4294967294, 4294967292, 4294967288, + (35): 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, + (40): 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, + (45): 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, + (50): 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, + (55): 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, + (60): 3758096384, 3221225472, 2147483648, 0, 4294967292, 4294967288, + (66): 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, + (71): 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, + (76): 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, + (81): 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, + (86): 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, + (91): 3758096384, 3221225472, 2147483648, 0, 0, 4294967288, + (97): 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, + (102): 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, + (107): 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, + (112): 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, + (117): 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, + (122): 3758096384, 3221225472, 2147483648, 0, 0, 0, 4294967280, + (129): 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, + (134): 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, + (139): 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, + (144): 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, + (149): 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, + (154): 3221225472, 2147483648, 0, 0, 0, 0, 4294967264, 4294967232, + (162): 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, + (167): 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, + (172): 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, + (177): 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, + (182): 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, + (187): 0, 0, 0, 0, 0, 4294967232, 4294967168, 4294967040, + (195): 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, + (200): 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, + (205): 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, + (210): 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, + (215): 3758096384, 3221225472, 2147483648, 0, 0, 0, 0, 0, 0, + (224): 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, + (229): 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, + (234): 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, + (239): 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, + (244): 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, + (249): 0, 0, 0, 0, 0, 0, 0 + } + } + } + DATASET "DU64BITS" { + DATATYPE H5T_STD_U64LE + DATASPACE SIMPLE { ( 8, 64 ) / ( 8, 64 ) } + DATA { + (0,0): 18446744073709551615, 18446744073709551614, + (0,2): 18446744073709551612, 18446744073709551608, + (0,4): 18446744073709551600, 18446744073709551584, + (0,6): 18446744073709551552, 18446744073709551488, + (0,8): 18446744073709551360, 18446744073709551104, + (0,10): 18446744073709550592, 18446744073709549568, + (0,12): 18446744073709547520, 18446744073709543424, + (0,14): 18446744073709535232, 18446744073709518848, + (0,16): 18446744073709486080, 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0.0004, 0.0005, 0.0006, 0.0007, + (1,0): 1, 1.0001, 1.0002, 1.0003, 1.0004, 1.0005, 1.0006, 1.0007, + (2,0): 2, 2.0001, 2.0002, 2.0003, 2.0004, 2.0005, 2.0006, 2.0007, + (3,0): 3, 3.0001, 3.0002, 3.0003, 3.0004, 3.0005, 3.0006, 3.0007, + (4,0): 4, 4.0001, 4.0002, 4.0003, 4.0004, 4.0005, 4.0006, 4.0007, + (5,0): 5, 5.0001, 5.0002, 5.0003, 5.0004, 5.0005, 5.0006, 5.0007, + (6,0): 6, 6.0001, 6.0002, 6.0003, 6.0004, 6.0005, 6.0006, 6.0007, + (7,0): 7, 7.0001, 7.0002, 7.0003, 7.0004, 7.0005, 7.0006, 7.0007 + } + ATTRIBUTE "DummyDBL" { + DATATYPE H5T_IEEE_F64BE + DATASPACE SIMPLE { ( 64 ) / ( 64 ) } + DATA { + (0): 0, 0.0001, 0.0002, 0.0003, 0.0004, 0.0005, 0.0006, 0.0007, 1, + (9): 1.0001, 1.0002, 1.0003, 1.0004, 1.0005, 1.0006, 1.0007, 2, + (17): 2.0001, 2.0002, 2.0003, 2.0004, 2.0005, 2.0006, 2.0007, 3, + (25): 3.0001, 3.0002, 3.0003, 3.0004, 3.0005, 3.0006, 3.0007, 4, + (33): 4.0001, 4.0002, 4.0003, 4.0004, 4.0005, 4.0006, 4.0007, 5, + (41): 5.0001, 5.0002, 5.0003, 5.0004, 5.0005, 5.0006, 5.0007, 6, + (49): 6.0001, 6.0002, 6.0003, 6.0004, 6.0005, 6.0006, 6.0007, 7, + (57): 7.0001, 7.0002, 7.0003, 7.0004, 7.0005, 7.0006, 7.0007 + } + } + } +} +} diff --git a/tools/testfiles/tintsattrs.h5 b/tools/testfiles/tintsattrs.h5 new file mode 100644 index 0000000..ca8c573 Binary files /dev/null and b/tools/testfiles/tintsattrs.h5 differ diff --git a/tools/testfiles/treadfilter.ddl b/tools/testfiles/treadfilter.ddl new file mode 100644 index 0000000..25875f3 --- /dev/null +++ b/tools/testfiles/treadfilter.ddl @@ -0,0 +1,358 @@ +HDF5 "tfilters.h5" { +GROUP "/" { + DATASET "all" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "alloc_time_early" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "alloc_time_incr" { + 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(5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "contiguous" { + COMMENT "This is a dataset with contiguous storage" + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "deflate" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "external" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 100 ) / ( 100 ) } + DATA { + } + } + DATASET "fletcher32" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "myfilter" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + } + } + DATATYPE "mytype" H5T_STD_B8LE; + DATASET "nbit" { + DATATYPE 32-bit little-endian integer + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (1,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (2,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (3,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (4,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (5,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (6,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (7,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (8,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (9,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (10,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (11,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (12,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (13,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (14,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (15,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (16,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (17,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (18,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (19,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1 + } + } + DATASET "scaleoffset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, + (3,0): 14, 15, 0, 1, 2, 19, 0, 5, 6, 7, + (4,0): 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, + (5,0): 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, + (6,0): 12, 13, 14, 15, 0, 17, 18, 19, 0, 5, + (7,0): 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, + (8,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (9,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, + (13,0): 114, 0, 100, 101, 102, 119, 0, 105, 106, 107, + (14,0): 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, + (15,0): 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, + (16,0): 112, 113, 114, 0, 100, 117, 118, 119, 0, 105, + (17,0): 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, + (18,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (19,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119 + } + } + DATASET "shuffle" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } + DATASET "szip" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } + } +} +} diff --git a/tools/testfiles/treadintfilter.ddl b/tools/testfiles/treadintfilter.ddl new file mode 100644 index 0000000..a2269a6b --- /dev/null +++ b/tools/testfiles/treadintfilter.ddl @@ -0,0 +1,132 @@ +HDF5 "tfilters.h5" { +DATASET "deflate" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } +} +DATASET "shuffle" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } +} +DATASET "fletcher32" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, + (3,0): 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, + (4,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, + (5,0): 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, + (6,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, + (7,0): 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, + (8,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, + (9,0): 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, + (13,0): 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, + (14,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, + (15,0): 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, + (16,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, + (17,0): 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, + (18,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, + (19,0): 190, 191, 192, 193, 194, 195, 196, 197, 198, 199 + } +} +DATASET "nbit" { + DATATYPE 32-bit little-endian integer + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (1,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (2,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (3,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (4,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (5,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (6,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (7,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (8,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (9,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (10,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (11,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (12,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (13,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (14,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (15,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1, + (16,0): 0, 1, 2, 3, -4, -3, -2, -1, 0, 1, + (17,0): 2, 3, -4, -3, -2, -1, 0, 1, 2, 3, + (18,0): -4, -3, -2, -1, 0, 1, 2, 3, -4, -3, + (19,0): -2, -1, 0, 1, 2, 3, -4, -3, -2, -1 + } +} +DATASET "scaleoffset" { + DATATYPE H5T_STD_I32LE + DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } + DATA { + (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (1,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (2,0): 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, + (3,0): 14, 15, 0, 1, 2, 19, 0, 5, 6, 7, + (4,0): 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, + (5,0): 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, + (6,0): 12, 13, 14, 15, 0, 17, 18, 19, 0, 5, + (7,0): 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, + (8,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, + (9,0): 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, + (10,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (11,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, + (12,0): 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, + (13,0): 114, 0, 100, 101, 102, 119, 0, 105, 106, 107, + (14,0): 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, + (15,0): 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, + (16,0): 112, 113, 114, 0, 100, 117, 118, 119, 0, 105, + (17,0): 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, + (18,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, + (19,0): 110, 111, 112, 113, 114, 115, 116, 117, 118, 119 + } +} +} diff --git a/tools/testfiles/tscalarintattrsize.ddl b/tools/testfiles/tscalarintattrsize.ddl new file mode 100644 index 0000000..a9de66b --- /dev/null +++ b/tools/testfiles/tscalarintattrsize.ddl @@ -0,0 +1,256 @@ +HDF5 "tscalarintattrsize.h5" { +GROUP "/" { + DATASET "DS08BITS" { + DATATYPE H5T_ARRAY { [8][8] H5T_STD_I8LE } + DATASPACE SCALAR + DATA { + (0): [ -1, -2, -4, -8, -16, -32, -64, -128, + -2, -4, -8, -16, -32, -64, -128, 0, + -4, -8, -16, -32, -64, -128, 0, 0, + -8, -16, -32, -64, -128, 0, 0, 0, + -16, -32, -64, -128, 0, 0, 0, 0, + -32, -64, -128, 0, 0, 0, 0, 0, + -64, -128, 0, 0, 0, 0, 0, 0, + -128, 0, 0, 0, 0, 0, 0, 0 ] + } + ATTRIBUTE "DS08BITS" { + DATATYPE H5T_ARRAY { [8][8] H5T_STD_I8LE } + DATASPACE SCALAR + DATA { + (0): [ -1, -2, -4, 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-576460752303423488, -1152921504606846976, -2305843009213693952, -4611686018427387904, -9223372036854775808, 0, 0, 0, 0, 0, 0, + -128, -256, -512, -1024, -2048, -4096, -8192, -16384, -32768, -65536, -131072, -262144, -524288, -1048576, -2097152, -4194304, -8388608, -16777216, -33554432, -67108864, -134217728, -268435456, -536870912, -1073741824, -2147483648, -4294967296, -8589934592, -17179869184, -34359738368, -68719476736, -137438953472, -274877906944, -549755813888, -1099511627776, -2199023255552, -4398046511104, -8796093022208, -17592186044416, -35184372088832, -70368744177664, -140737488355328, -281474976710656, -562949953421312, -1125899906842624, -2251799813685248, -4503599627370496, -9007199254740992, -18014398509481984, -36028797018963968, -72057594037927936, -144115188075855872, -288230376151711744, -576460752303423488, -1152921504606846976, -2305843009213693952, -4611686018427387904, -9223372036854775808, 0, 0, 0, 0, 0, 0, 0 ] + } + } + } + DATASET "DU08BITS" { + DATATYPE H5T_ARRAY { [8][8] H5T_STD_U8LE } + DATASPACE SCALAR + DATA { + (0): [ 255, 254, 252, 248, 240, 224, 192, 128, + 254, 252, 248, 240, 224, 192, 128, 0, + 252, 248, 240, 224, 192, 128, 0, 0, + 248, 240, 224, 192, 128, 0, 0, 0, + 240, 224, 192, 128, 0, 0, 0, 0, + 224, 192, 128, 0, 0, 0, 0, 0, + 192, 128, 0, 0, 0, 0, 0, 0, + 128, 0, 0, 0, 0, 0, 0, 0 ] + } + ATTRIBUTE "DU08BITS" { + DATATYPE H5T_ARRAY { [8][8] H5T_STD_U8LE } + DATASPACE SCALAR + DATA { + (0): [ 255, 254, 252, 248, 240, 224, 192, 128, + 254, 252, 248, 240, 224, 192, 128, 0, + 252, 248, 240, 224, 192, 128, 0, 0, + 248, 240, 224, 192, 128, 0, 0, 0, + 240, 224, 192, 128, 0, 0, 0, 0, + 224, 192, 128, 0, 0, 0, 0, 0, + 192, 128, 0, 0, 0, 0, 0, 0, + 128, 0, 0, 0, 0, 0, 0, 0 ] + } + } + } + DATASET "DU16BITS" { + DATATYPE H5T_ARRAY { [8][16] H5T_STD_U16LE } + DATASPACE SCALAR + DATA { + (0): [ 65535, 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, + 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, + 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, + 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, + 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, + 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, + 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, 0, + 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, 0, 0 ] + } + ATTRIBUTE "DU16BITS" { + DATATYPE H5T_ARRAY { [8][16] H5T_STD_U16LE } + DATASPACE SCALAR + DATA { + (0): [ 65535, 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, + 65534, 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, + 65532, 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, + 65528, 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, + 65520, 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, + 65504, 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, + 65472, 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, 0, + 65408, 65280, 65024, 64512, 63488, 61440, 57344, 49152, 32768, 0, 0, 0, 0, 0, 0, 0 ] + } + } + } + DATASET "DU32BITS" { + DATATYPE H5T_ARRAY { [8][32] H5T_STD_U32LE } + DATASPACE SCALAR + DATA { + (0): [ 4294967295, 4294967294, 4294967292, 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, 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4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, 0, 0, 0, 0, 0, + 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, 0, 0, 0, 0, 0, 0 ] + } + ATTRIBUTE "DU32BITS" { + DATATYPE H5T_ARRAY { [8][32] H5T_STD_U32LE } + DATASPACE SCALAR + DATA { + (0): [ 4294967295, 4294967294, 4294967292, 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, + 4294967294, 4294967292, 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, + 4294967292, 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 4292870144, 4290772992, 4286578688, 4278190080, 4261412864, 4227858432, 4160749568, 4026531840, 3758096384, 3221225472, 2147483648, 0, 0, + 4294967288, 4294967280, 4294967264, 4294967232, 4294967168, 4294967040, 4294966784, 4294966272, 4294965248, 4294963200, 4294959104, 4294950912, 4294934528, 4294901760, 4294836224, 4294705152, 4294443008, 4293918720, 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7.0005, 7.0006, 7.0007 ] + } + ATTRIBUTE "DummyDBL" { + DATATYPE H5T_ARRAY { [8][8] H5T_IEEE_F64LE } + DATASPACE SCALAR + DATA { + (0): [ 0, 0.0001, 0.0002, 0.0003, 0.0004, 0.0005, 0.0006, 0.0007, + 1, 1.0001, 1.0002, 1.0003, 1.0004, 1.0005, 1.0006, 1.0007, + 2, 2.0001, 2.0002, 2.0003, 2.0004, 2.0005, 2.0006, 2.0007, + 3, 3.0001, 3.0002, 3.0003, 3.0004, 3.0005, 3.0006, 3.0007, + 4, 4.0001, 4.0002, 4.0003, 4.0004, 4.0005, 4.0006, 4.0007, + 5, 5.0001, 5.0002, 5.0003, 5.0004, 5.0005, 5.0006, 5.0007, + 6, 6.0001, 6.0002, 6.0003, 6.0004, 6.0005, 6.0006, 6.0007, + 7, 7.0001, 7.0002, 7.0003, 7.0004, 7.0005, 7.0006, 7.0007 ] + } + } + } +} +} diff --git a/tools/testfiles/tscalarintattrsize.h5 b/tools/testfiles/tscalarintattrsize.h5 new file mode 100644 index 0000000..61f5fb3 Binary files /dev/null and b/tools/testfiles/tscalarintattrsize.h5 differ diff --git a/tools/testfiles/tscaleoffset.ddl b/tools/testfiles/tscaleoffset.ddl index f1891da..ba49c70 100644 --- a/tools/testfiles/tscaleoffset.ddl +++ b/tools/testfiles/tscaleoffset.ddl @@ -4,10 +4,10 @@ DATASET "scaleoffset" { DATASPACE SIMPLE { ( 20, 10 ) / ( 20, 10 ) } STORAGE_LAYOUT { CHUNKED ( 10, 5 ) - SIZE 152 (5.263:1 COMPRESSION) + SIZE 188 (4.255:1 COMPRESSION) } FILTERS { - COMPRESSION SCALEOFFSET { MIN BITS 4 } + COMPRESSION SCALEOFFSET { MIN BITS 2 } } FILLVALUE { FILL_TIME H5D_FILL_TIME_IFSET diff --git a/vms/src/h5pubconf.h b/vms/src/h5pubconf.h index 83e3d14..d9a4235 100644 --- a/vms/src/h5pubconf.h +++ b/vms/src/h5pubconf.h @@ -511,7 +511,7 @@ #define H5_PACKAGE_NAME "HDF5" /* Define to the full name and version of this package. */ -#define H5_PACKAGE_STRING "HDF5 1.9.169-swmr_chksum2" +#define H5_PACKAGE_STRING "HDF5 1.9.170-swmr_chksum2" /* Define to the one symbol short name of this package. */ #define H5_PACKAGE_TARNAME "hdf5" @@ -520,7 +520,7 @@ #define H5_PACKAGE_URL "" /* Define to the version of this package. */ -#define H5_PACKAGE_VERSION "1.9.169-swmr_chksum2" +#define H5_PACKAGE_VERSION "1.9.170-swmr_chksum2" /* Width for printf() for type `long long' or `__int64', use `ll' */ #define H5_PRINTF_LL_WIDTH "ll" @@ -683,7 +683,7 @@ /* #undef H5_USING_MEMCHECKER */ /* Version number of package */ -#define H5_VERSION "1.9.169-swmr_chksum2" +#define H5_VERSION "1.9.170-swmr_chksum2" /* Define if vsnprintf() returns the correct value for formatted strings that don't fit into size allowed */ -- cgit v0.12