From 8cd9d8349e5984d8a6f78c9c0c1bb566a9960b23 Mon Sep 17 00:00:00 2001 From: Dana Robinson Date: Tue, 21 Apr 2020 11:36:10 -0700 Subject: Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp. --- tools/lib/h5diff.c | 29 ++- tools/lib/h5diff.h | 5 + tools/src/h5diff/h5diff_common.c | 52 ++++- tools/src/h5dump/h5dump.c | 128 +++++++---- tools/src/h5dump/h5dump.h | 1 + tools/src/h5ls/h5ls.c | 32 +++ tools/src/h5repack/h5repack_main.c | 1 + tools/src/misc/h5mkgrp.c | 234 ++++++++++++--------- tools/test/h5diff/testfiles/h5diff_10.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_600.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_603.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_606.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_612.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_615.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_621.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_622.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_623.txt | 12 ++ tools/test/h5diff/testfiles/h5diff_624.txt | 12 ++ tools/test/misc/testfiles/h5mkgrp_help.txt | 7 + tools/testfiles/h5dump-help.txt | 6 + tools/testfiles/help-1.ls | 6 + tools/testfiles/help-2.ls | 6 + tools/testfiles/help-3.ls | 6 + .../pbits/tnofilename-with-packed-bits.ddl | 6 + tools/testfiles/pbits/tpbitsIncomplete.ddl | 6 + tools/testfiles/pbits/tpbitsLengthExceeded.ddl | 6 + tools/testfiles/pbits/tpbitsLengthPositive.ddl | 6 + tools/testfiles/pbits/tpbitsMaxExceeded.ddl | 6 + tools/testfiles/pbits/tpbitsOffsetExceeded.ddl | 6 + tools/testfiles/pbits/tpbitsOffsetNegative.ddl | 6 + tools/testfiles/textlinksrc-nodangle-1.ls | 6 + tools/testfiles/tgroup-1.ls | 6 + 32 files changed, 540 insertions(+), 147 deletions(-) diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c index fff0b9a..d11d28f 100644 --- a/tools/lib/h5diff.c +++ b/tools/lib/h5diff.c @@ -519,6 +519,8 @@ h5diff(const char *fname1, const char *fname2, const char *objname1, const char { hid_t file1_id = H5I_INVALID_HID; hid_t file2_id = H5I_INVALID_HID; + hid_t fapl1_id = H5P_DEFAULT; + hid_t fapl2_id = H5P_DEFAULT; char filenames[2][MAX_FILENAME]; hsize_t nfound = 0; int l_ret1 = -1; @@ -570,17 +572,32 @@ h5diff(const char *fname1, const char *fname2, const char *objname1, const char *------------------------------------------------------------------------- */ /* open file 1 */ - if((file1_id = h5tools_fopen(fname1, H5F_ACC_RDONLY, H5P_DEFAULT, FALSE, NULL, (size_t)0)) < 0) { + if (opts->custom_in_vol) { + if((fapl1_id = h5tools_get_fapl(H5P_DEFAULT, &(opts->in_vol_info), NULL)) < 0 ) { + parallel_print("h5diff: unable to create fapl for input file\n"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "unable to create input fapl\n"); + } + } + + if((file1_id = h5tools_fopen(fname1, H5F_ACC_RDONLY, fapl1_id, FALSE, NULL, (size_t)0)) < 0) { parallel_print("h5diff: <%s>: unable to open file\n", fname1); H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "<%s>: unable to open file\n", fname1); - } /* end if */ + } H5TOOLS_DEBUG("file1_id = %s", fname1); /* open file 2 */ - if((file2_id = h5tools_fopen(fname2, H5F_ACC_RDONLY, H5P_DEFAULT, FALSE, NULL, (size_t)0)) < 0) { + + if (opts->custom_out_vol) { + if((fapl2_id = h5tools_get_fapl(H5P_DEFAULT, &(opts->out_vol_info), NULL)) < 0 ) { + parallel_print("h5diff: unable to create fapl for output file\n"); + H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "unable to create output fapl\n"); + } + } + + if((file2_id = h5tools_fopen(fname2, H5F_ACC_RDONLY, fapl2_id, FALSE, NULL, (size_t)0)) < 0) { parallel_print("h5diff: <%s>: unable to open file\n", fname2); H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "<%s>: unable to open file\n", fname2); - } /* end if */ + } H5TOOLS_DEBUG("file2_id = %s", fname2); /*------------------------------------------------------------------------- @@ -967,6 +984,10 @@ done: { H5Fclose(file1_id); H5Fclose(file2_id); + if (fapl1_id != H5P_DEFAULT) + H5Pclose(fapl1_id); + if (fapl2_id != H5P_DEFAULT) + H5Pclose(fapl2_id); } H5E_END_TRY; H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat); diff --git a/tools/lib/h5diff.h b/tools/lib/h5diff.h index b04ec23..1ac1dd7 100644 --- a/tools/lib/h5diff.h +++ b/tools/lib/h5diff.h @@ -15,6 +15,7 @@ #define H5DIFF_H__ #include "hdf5.h" +#include "h5tools.h" #include "h5trav.h" /* @@ -86,6 +87,10 @@ typedef struct { int m_list_not_cmp; /* list not comparable messages */ int exclude_path; /* exclude path to an object */ struct exclude_path_list * exclude; /* keep exclude path list */ + h5tools_vol_info_t in_vol_info; /* VOL information for input file */ + h5tools_vol_info_t out_vol_info; /* VOL information for output file */ + hbool_t custom_in_vol; /* Using a custom input VOL? */ + hbool_t custom_out_vol; /* Using a custom output VOL? */ } diff_opt_t; diff --git a/tools/src/h5diff/h5diff_common.c b/tools/src/h5diff/h5diff_common.c index e05a8e3..e040696 100644 --- a/tools/src/h5diff/h5diff_common.c +++ b/tools/src/h5diff/h5diff_common.c @@ -42,6 +42,12 @@ static struct long_options l_opts[] = { { "no-dangling-links", no_arg, 'x' }, { "exclude-path", require_arg, 'E' }, { "enable-error-stack", no_arg, 'S' }, + { "src-vol-value", require_arg, '1' }, + { "src-vol-name", require_arg, '2' }, + { "src-vol-info", require_arg, '3' }, + { "dst-vol-value", require_arg, '4' }, + { "dst-vol-name", require_arg, '5' }, + { "dst-vol-info", require_arg, '6' }, { NULL, 0, '\0' } }; @@ -91,7 +97,7 @@ void parse_command_line(int argc, struct exclude_path_list *exclude_head, *exclude_prev, *exclude_node; /* process the command-line */ - memset(opts, 0, sizeof (diff_opt_t)); + HDmemset(opts, 0, sizeof (diff_opt_t)); /* assume equal contents initially */ opts->contents = 1; @@ -258,6 +264,38 @@ void parse_command_line(int argc, case 'e': opts->use_system_epsilon = 1; break; + + case '1': + opts->in_vol_info.type = VOL_BY_VALUE; + opts->in_vol_info.u.value = (H5VL_class_value_t)HDatoi(opt_arg); + opts->custom_in_vol = TRUE; + break; + + case '2': + opts->in_vol_info.type = VOL_BY_NAME; + opts->in_vol_info.u.name = opt_arg; + opts->custom_in_vol = TRUE; + break; + + case '3': + opts->in_vol_info.info_string = opt_arg; + break; + + case '4': + opts->out_vol_info.type = VOL_BY_VALUE; + opts->out_vol_info.u.value = (H5VL_class_value_t)HDatoi(opt_arg); + opts->custom_out_vol = TRUE; + break; + + case '5': + opts->out_vol_info.type = VOL_BY_NAME; + opts->out_vol_info.u.name = opt_arg; + opts->custom_out_vol = TRUE; + break; + + case '6': + opts->out_vol_info.info_string = opt_arg; + break; } } @@ -469,6 +507,18 @@ void usage(void) PRINTVALSTREAM(rawoutstream, " Quiet mode. Do not produce output.\n"); PRINTVALSTREAM(rawoutstream, " --enable-error-stack\n"); PRINTVALSTREAM(rawoutstream, " Prints messages from the HDF5 error stack as they occur.\n"); + PRINTVALSTREAM(rawoutstream, " --src-vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " input HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --src-vol-name Name of the VOL connector to use for opening the input\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --src-vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, " opening the input HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --dst-vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " output HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --dst-vol-name Name of the VOL connector to use for opening the output\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --dst-vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, " opening the output HDF5 file specified\n"); PRINTVALSTREAM(rawoutstream, " --follow-symlinks\n"); PRINTVALSTREAM(rawoutstream, " Follow symbolic links (soft links and external links and compare the)\n"); PRINTVALSTREAM(rawoutstream, " links' target objects.\n"); diff --git a/tools/src/h5dump/h5dump.c b/tools/src/h5dump/h5dump.c index d292b75..dfaff17 100644 --- a/tools/src/h5dump/h5dump.c +++ b/tools/src/h5dump/h5dump.c @@ -18,15 +18,18 @@ /* Name of tool */ #define PROGRAMNAME "h5dump" -static const char *driver = NULL; /* The driver to open the file with. */ -const char *outfname=NULL; -static int doxml = 0; -static int useschema = 1; -static const char *xml_dtd_uri = NULL; +static const char *driver_name_g = NULL; /* The driver to open the file with. */ +const char *outfname_g = NULL; +static hbool_t doxml_g = FALSE; +static hbool_t useschema_g = TRUE; +static const char *xml_dtd_uri_g = NULL; + +static hbool_t use_custom_vol_g = FALSE; +static h5tools_vol_info_t vol_info_g; #ifdef H5_HAVE_ROS3_VFD /* Default "anonymous" S3 configuration */ -static H5FD_ros3_fapl_t ros3_fa = { +static H5FD_ros3_fapl_t ros3_fa_g = { 1, /* Structure Version */ false, /* Authenticate? */ "", /* AWS Region */ @@ -37,7 +40,7 @@ static H5FD_ros3_fapl_t ros3_fa = { #ifdef H5_HAVE_LIBHDFS /* "Default" HDFS configuration */ -static H5FD_hdfs_fapl_t hdfs_fa = { +static H5FD_hdfs_fapl_t hdfs_fa_g = { 1, /* Structure Version */ "localhost", /* Namenode Name */ 0, /* Namenode Port */ @@ -213,6 +216,9 @@ static struct long_options l_opts[] = { { "vds-gap-size", require_arg, 'G' }, { "s3-cred", require_arg, '$' }, { "hdfs-attrs", require_arg, '#' }, + { "vol-value", require_arg, '1' }, + { "vol-name", require_arg, '2' }, + { "vol-info", require_arg, '3' }, { NULL, 0, '\0' } }; @@ -270,6 +276,12 @@ usage(const char *prog) PRINTVALSTREAM(rawoutstream, " ,,\n"); PRINTVALSTREAM(rawoutstream, " )\n"); PRINTVALSTREAM(rawoutstream, " Any absent attribute will use a default value.\n"); + PRINTVALSTREAM(rawoutstream, " --vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --vol-name Name of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, " opening the HDF5 file specified\n"); PRINTVALSTREAM(rawoutstream, "--------------- Object Options ---------------\n"); PRINTVALSTREAM(rawoutstream, " -a P, --attribute=P Print the specified attribute\n"); PRINTVALSTREAM(rawoutstream, " If an attribute name contains a slash (/), escape the\n"); @@ -863,7 +875,7 @@ parse_command_line(int argc, const char *argv[]) int opt; int last_was_dset = FALSE; - /* no arguments */ + /* no arguments */ if (argc == 1) { usage(h5tools_getprogname()); goto error; @@ -981,7 +993,7 @@ parse_start: last_was_dset = TRUE; break; case 'f': - driver = opt_arg; + driver_name_g = opt_arg; break; case 'g': display_all = 0; @@ -1051,7 +1063,7 @@ parse_start: usingdasho = TRUE; last_was_dset = FALSE; - outfname = opt_arg; + outfname_g = opt_arg; break; case 'b': @@ -1063,8 +1075,8 @@ parse_start: } } bin_output = TRUE; - if (outfname!=NULL) { - if (h5tools_set_data_output_file(outfname, 1) < 0) { + if (outfname_g != NULL) { + if (h5tools_set_data_output_file(outfname_g, 1) < 0) { /* failed to set output file */ usage(h5tools_getprogname()); goto error; @@ -1115,15 +1127,15 @@ parse_start: /** begin XML parameters **/ case 'x': /* select XML output */ - doxml = TRUE; - useschema = TRUE; + doxml_g = TRUE; + useschema_g = TRUE; h5tools_dump_header_format = NULL; dump_function_table = &xml_function_table; h5tools_nCols = 0; break; case 'u': - doxml = TRUE; - useschema = FALSE; + doxml_g = TRUE; + useschema_g = FALSE; xmlnsprefix = ""; h5tools_dump_header_format = NULL; dump_function_table = &xml_function_table; @@ -1132,7 +1144,7 @@ parse_start: case 'D': /* specify alternative XML DTD or schema */ /* To Do: check format of this value? */ - xml_dtd_uri = opt_arg; + xml_dtd_uri_g = opt_arg; h5tools_nCols = 0; break; @@ -1145,7 +1157,7 @@ parse_start: case 'X': /* specify XML namespace (default="hdf5:"), or none */ /* To Do: check format of this value? */ - if (!useschema) { + if (!useschema_g) { usage(h5tools_getprogname()); goto error; } @@ -1254,7 +1266,7 @@ end_collect: case '$': #ifdef H5_HAVE_ROS3_VFD - if (h5tools_parse_ros3_fapl_tuple(opt_arg, ',', &ros3_fa) < 0) { + if (h5tools_parse_ros3_fapl_tuple(opt_arg, ',', &ros3_fa_g) < 0) { error_msg("failed to parse S3 VFD credential info\n"); usage(h5tools_getprogname()); free_handler(hand, argc); @@ -1271,7 +1283,7 @@ end_collect: case '#': #ifdef H5_HAVE_LIBHDFS - if (h5tools_parse_hdfs_fapl_tuple(opt_arg, ',', &hdfs_fa) < 0) { + if (h5tools_parse_hdfs_fapl_tuple(opt_arg, ',', &hdfs_fa_g) < 0) { error_msg("failed to parse HDFS VFD configuration info\n"); usage(h5tools_getprogname()); free_handler(hand, argc); @@ -1286,6 +1298,22 @@ end_collect: #endif break; + case '1': + vol_info_g.type = VOL_BY_VALUE; + vol_info_g.u.value = (H5VL_class_value_t)HDatoi(opt_arg); + use_custom_vol_g = TRUE; + break; + + case '2': + vol_info_g.type = VOL_BY_NAME; + vol_info_g.u.name = opt_arg; + use_custom_vol_g = TRUE; + break; + + case '3': + vol_info_g.info_string = opt_arg; + break; + case '?': default: usage(h5tools_getprogname()); @@ -1360,7 +1388,7 @@ main(int argc, const char *argv[]) goto done; } - if (bin_output && outfname == NULL) { + if (bin_output && outfname_g == NULL) { error_msg("binary output requires a file name, use -o \n"); h5tools_setstatus(EXIT_FAILURE); goto done; @@ -1372,7 +1400,7 @@ main(int argc, const char *argv[]) } /* Check for conflicting options */ - if (doxml) { + if (doxml_g) { if (!display_all) { error_msg("option \"%s\" not available for XML\n", "to display selected objects"); h5tools_setstatus(EXIT_FAILURE); @@ -1400,8 +1428,8 @@ main(int argc, const char *argv[]) } } else { - if (xml_dtd_uri) { - warn_msg("option \"%s\" only applies with XML: %s\n", "--xml-dtd", xml_dtd_uri); + if (xml_dtd_uri_g) { + warn_msg("option \"%s\" only applies with XML: %s\n", "--xml-dtd", xml_dtd_uri_g); } } @@ -1414,24 +1442,24 @@ main(int argc, const char *argv[]) /* Initialize indexing options */ h5trav_set_index(sort_by, sort_order); - if (driver != NULL) { + if (driver_name_g != NULL) { h5tools_vfd_info_t vfd_info; vfd_info.info = NULL; - vfd_info.name = driver; + vfd_info.name = driver_name_g; - if (!HDstrcmp(driver, drivernames[ROS3_VFD_IDX])) { + if (!HDstrcmp(driver_name_g, drivernames[ROS3_VFD_IDX])) { #ifdef H5_HAVE_ROS3_VFD - vfd_info.info = (void *)&ros3_fa; + vfd_info.info = (void *)&ros3_fa_g; #else error_msg("Read-Only S3 VFD not enabled.\n"); h5tools_setstatus(EXIT_FAILURE); goto done; #endif } - else if (!HDstrcmp(driver, drivernames[HDFS_VFD_IDX])) { + else if (!HDstrcmp(driver_name_g, drivernames[HDFS_VFD_IDX])) { #ifdef H5_HAVE_LIBHDFS - vfd_info.info = (void *)&hdfs_fa; + vfd_info.info = (void *)&hdfs_fa_g; #else error_msg("The HDFS VFD is not enabled.\n"); h5tools_setstatus(EXIT_FAILURE); @@ -1444,7 +1472,15 @@ main(int argc, const char *argv[]) h5tools_setstatus(EXIT_FAILURE); goto done; } - } /* driver defined */ + } /* driver name defined */ + + if (use_custom_vol_g) { + if ((fapl_id = h5tools_get_fapl(H5P_DEFAULT, &vol_info_g, NULL)) < 0) { + error_msg("unable to create FAPL for file access\n"); + h5tools_setstatus(EXIT_FAILURE); + goto done; + } + } while(opt_ind < argc) { fname = HDstrdup(argv[opt_ind++]); @@ -1464,23 +1500,23 @@ main(int argc, const char *argv[]) /* Prepare to find objects that might be targets of a reference */ fill_ref_path_table(fid); - if(doxml) { + if(doxml_g) { /* initialize XML */ /* reset prefix! */ HDstrcpy(prefix, ""); /* make sure the URI is initialized to something */ - if (xml_dtd_uri == NULL) { - if (useschema) { - xml_dtd_uri = DEFAULT_XSD; + if (xml_dtd_uri_g == NULL) { + if (useschema_g) { + xml_dtd_uri_g = DEFAULT_XSD; } else { - xml_dtd_uri = DEFAULT_DTD; + xml_dtd_uri_g = DEFAULT_DTD; xmlnsprefix = ""; } } else { - if (useschema && HDstrcmp(xmlnsprefix,"")) { + if (useschema_g && HDstrcmp(xmlnsprefix,"")) { error_msg("Cannot set Schema URL for a qualified namespace--use -X or -U option with -D \n"); h5tools_setstatus(EXIT_FAILURE); goto done; @@ -1513,16 +1549,16 @@ main(int argc, const char *argv[]) } /* end if */ /* start to dump - display file header information */ - if (!doxml) { + if (!doxml_g) { begin_obj(h5tools_dump_header_format->filebegin, fname, h5tools_dump_header_format->fileblockbegin); } else { PRINTVALSTREAM(rawoutstream, "\n"); /* alternative first element, depending on schema or DTD. */ - if (useschema) { + if (useschema_g) { if (HDstrcmp(xmlnsprefix,"") == 0) { - PRINTSTREAM(rawoutstream, "\n", xml_dtd_uri); + PRINTSTREAM(rawoutstream, "\n", xml_dtd_uri_g); } else { /* TO DO: make -url option work in this case (may need new option) */ @@ -1542,12 +1578,12 @@ main(int argc, const char *argv[]) } } else { - PRINTSTREAM(rawoutstream, "\n", xml_dtd_uri); + PRINTSTREAM(rawoutstream, "\n", xml_dtd_uri_g); PRINTVALSTREAM(rawoutstream, "\n"); } } - if (!doxml) { + if (!doxml_g) { if (display_fi) { PRINTVALSTREAM(rawoutstream, "\n"); dump_fcontents(fid); @@ -1566,10 +1602,10 @@ main(int argc, const char *argv[]) h5tools_setstatus(EXIT_FAILURE); } else { - if (!doxml) + if (!doxml_g) dump_indent += COL; dump_function_table->dump_group_function(gid, "/" ); - if (!doxml) + if (!doxml_g) dump_indent -= COL; PRINTVALSTREAM(rawoutstream, "\n"); } @@ -1582,7 +1618,7 @@ main(int argc, const char *argv[]) } else { /* Note: this option is not supported for XML */ - if(doxml) { + if(doxml_g) { error_msg("internal error (file %s:line %d)\n", __FILE__, __LINE__); h5tools_setstatus(EXIT_FAILURE); goto done; @@ -1596,7 +1632,7 @@ main(int argc, const char *argv[]) PRINTVALSTREAM(rawoutstream, "\n"); } - if (!doxml) { + if (!doxml_g) { end_obj(h5tools_dump_header_format->fileend, h5tools_dump_header_format->fileblockend); PRINTVALSTREAM(rawoutstream, "\n"); } diff --git a/tools/src/h5dump/h5dump.h b/tools/src/h5dump/h5dump.h index 801f60d..ca1fef6 100644 --- a/tools/src/h5dump/h5dump.h +++ b/tools/src/h5dump/h5dump.h @@ -43,6 +43,7 @@ typedef struct h5dump_table_items_t { table_t *dset_table; /* Table of datasets */ table_t *type_table; /* Table of datatypes */ } h5dump_table_items_t; + typedef struct h5dump_table_list_t { size_t nalloc; size_t nused; diff --git a/tools/src/h5ls/h5ls.c b/tools/src/h5ls/h5ls.c index 3036ae9..765ab63 100644 --- a/tools/src/h5ls/h5ls.c +++ b/tools/src/h5ls/h5ls.c @@ -218,6 +218,12 @@ usage (void) PRINTVALSTREAM(rawoutstream, " ...,,)\n"); PRINTVALSTREAM(rawoutstream, " If absent or A == '(,,,,)', all default values are used.\n"); PRINTVALSTREAM(rawoutstream, " Has no effect if vfd flag is not 'hdfs'.\n"); + PRINTVALSTREAM(rawoutstream, " --vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --vol-name Name of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, " opening the HDF5 file specified\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " file/OBJECT\n"); PRINTVALSTREAM(rawoutstream, " Each object consists of an HDF5 file name optionally followed by a\n"); @@ -2854,6 +2860,8 @@ main(int argc, const char *argv[]) H5E_auto2_t tools_func; void *edata; void *tools_edata; + hbool_t custom_vol_fapl = FALSE; + h5tools_vol_info_t vol_info; #ifdef H5_HAVE_ROS3_VFD /* Default "anonymous" S3 configuration */ @@ -2892,6 +2900,9 @@ main(int argc, const char *argv[]) H5Eget_auto2(H5tools_ERR_STACK_g, &tools_func, &tools_edata); H5Eset_auto2(H5tools_ERR_STACK_g, NULL, NULL); + /* Initialize fapl info struct */ + HDmemset(&vol_info, 0, sizeof(h5tools_vol_info_t)); + /* Build object display table */ DISPATCH(H5O_TYPE_GROUP, "Group", NULL, NULL); DISPATCH(H5O_TYPE_DATASET, "Dataset", dataset_list1, dataset_list2); @@ -2955,6 +2966,19 @@ main(int argc, const char *argv[]) else if (!HDstrncmp(argv[argno], "--vfd=", (size_t)6)) { preferred_driver = argv[argno]+6; } + else if (!HDstrncmp(argv[argno], "--vol-value=", (size_t)12)) { + vol_info.type = VOL_BY_VALUE; + vol_info.u.value = (H5VL_class_value_t)HDatoi(argv[argno]+12); + custom_vol_fapl = TRUE; + } + else if (!HDstrncmp(argv[argno], "--vol-name=", (size_t)11)) { + vol_info.type = VOL_BY_NAME; + vol_info.u.name = argv[argno]+11; + custom_vol_fapl = TRUE; + } + else if (!HDstrncmp(argv[argno], "--vol-info=", (size_t)11)) { + vol_info.info_string = argv[argno]+11; + } else if (!HDstrncmp(argv[argno], "--width=", (size_t)8)) { width_g = (int)HDstrtol(argv[argno]+8, &rest, 0); @@ -3147,6 +3171,14 @@ main(int argc, const char *argv[]) leave(EXIT_FAILURE); } + /* Setup a custom fapl for file accesses */ + if (custom_vol_fapl) { + if ((fapl_id = h5tools_get_fapl(H5P_DEFAULT, &vol_info, NULL)) < 0) { + error_msg("failed to setup file access property list (fapl) for file\n"); + leave(EXIT_FAILURE); + } + } + if (preferred_driver) { h5tools_vfd_info_t vfd_info; diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c index d54827f..f7822ca 100644 --- a/tools/src/h5repack/h5repack_main.c +++ b/tools/src/h5repack/h5repack_main.c @@ -440,6 +440,7 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) int bound, opt; int ret_value = 0; + /* Initialize fapl info structs */ HDmemset(&in_vol_info, 0, sizeof(h5tools_vol_info_t)); HDmemset(&out_vol_info, 0, sizeof(h5tools_vol_info_t)); diff --git a/tools/src/misc/h5mkgrp.c b/tools/src/misc/h5mkgrp.c index a2cb68b..cbd6e6d 100644 --- a/tools/src/misc/h5mkgrp.c +++ b/tools/src/misc/h5mkgrp.c @@ -25,24 +25,29 @@ int d_status = EXIT_SUCCESS; /* command-line options: short and long-named parameters */ static const char *s_opts = "hlpvV"; static struct long_options l_opts[] = { - { "help", no_arg, 'h' }, - { "latest", no_arg, 'l' }, - { "parents", no_arg, 'p' }, - { "verbose", no_arg, 'v' }, - { "version", no_arg, 'V' }, + { "help", no_arg, 'h' }, + { "latest", no_arg, 'l' }, + { "parents", no_arg, 'p' }, + { "verbose", no_arg, 'v' }, + { "version", no_arg, 'V' }, + { "vol-value", require_arg, '1' }, + { "vol-name", require_arg, '2' }, + { "vol-info", require_arg, '3' }, { NULL, 0, '\0' } }; /* Command line parameter settings */ -typedef struct { +typedef struct mkgrp_opt_t { char *fname; /* File name to operate on */ hbool_t latest; /* Whether file should use latest format versions */ hbool_t verbose; /* Whether output should be verbose */ hbool_t parents; /* Whether to create intermediate groups */ size_t ngroups; /* Number of groups to create */ char **groups; /* Pointer to array of group names */ -} param_t; -param_t params; /* Command line parameter settings */ + hid_t fapl_id; /* fapl to use when opening the file */ +} mkgrp_opt_t; + +mkgrp_opt_t params_g; /* Command line parameter settings */ /*------------------------------------------------------------------------- @@ -61,13 +66,17 @@ leave(int ret) { size_t curr_group; - if (params.fname) - HDfree (params.fname); - if (params.ngroups) { - for(curr_group = 0; curr_group < params.ngroups; curr_group++) - HDfree (params.groups[curr_group]); - HDfree (params.groups); + if (params_g.fname) + HDfree(params_g.fname); + if (params_g.ngroups) { + for (curr_group = 0; curr_group < params_g.ngroups; curr_group++) + HDfree(params_g.groups[curr_group]); + HDfree(params_g.groups); } + if (H5I_INVALID_HID != params_g.fapl_id && H5P_DEFAULT != params_g.fapl_id) + if (H5Pclose(params_g.fapl_id) < 0) + error_msg("Could not close file access property list\n"); + h5tools_close(); HDexit(ret); } /* end leave() */ @@ -85,65 +94,79 @@ leave(int ret) *------------------------------------------------------------------------- */ static void -usage(void) +usage(const char *prog) { - HDfprintf(stdout, "\ -usage: h5mkgrp [OPTIONS] FILE GROUP...\n\ - OPTIONS\n\ - -h, --help Print a usage message and exit\n\ - -l, --latest Use latest version of file format to create groups\n\ - -p, --parents No error if existing, make parent groups as needed\n\ - -v, --verbose Print information about OBJECTS and OPTIONS\n\ - -V, --version Print version number and exit\n"); + FLUSHSTREAM(rawoutstream); + PRINTSTREAM(rawoutstream, "usage: %s [OPTIONS] FILE GROUP...\n", prog); + PRINTVALSTREAM(rawoutstream, " OPTIONS\n"); + PRINTVALSTREAM(rawoutstream, " -h, --help Print a usage message and exit\n"); + PRINTVALSTREAM(rawoutstream, " -l, --latest Use latest version of file format to create groups\n"); + PRINTVALSTREAM(rawoutstream, " -p, --parents No error if existing, make parent groups as needed\n"); + PRINTVALSTREAM(rawoutstream, " -v, --verbose Print information about OBJECTS and OPTIONS\n"); + PRINTVALSTREAM(rawoutstream, " -V, --version Print version number and exit\n"); + PRINTVALSTREAM(rawoutstream, " --vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --vol-name Name of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, " --vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, " opening the HDF5 file specified\n"); + PRINTVALSTREAM(rawoutstream, "\n"); } /* end usage() */ /*------------------------------------------------------------------------- - * Function: parse_command_line + * Function: parse_command_line * - * Purpose: Parses command line and sets up global variable to control output + * Purpose: Parses command line and sets up global variable to control + * output * - * Return: Success: 0 - * Failure: -1 + * Return: Success: 0 + * Failure: -1 * * Programmer: Quincey Koziol, 2/13/2007 * *------------------------------------------------------------------------- */ static int -parse_command_line(int argc, const char *argv[], param_t *parms) +parse_command_line(int argc, const char *argv[], mkgrp_opt_t *options) { int opt; /* Option from command line */ size_t curr_group; /* Current group name to copy */ + hbool_t custom_fapl = FALSE; + h5tools_vol_info_t vol_info; + hid_t tmp_fapl_id = H5I_INVALID_HID; /* Check for empty command line */ if(argc == 1) { - usage(); + usage(h5tools_getprogname()); leave(EXIT_SUCCESS); - } /* end if */ + } + + /* Initialize fapl info struct */ + HDmemset(&vol_info, 0, sizeof(h5tools_vol_info_t)); /* Parse command line options */ while((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) { switch((char)opt) { /* Display 'help' */ case 'h': - usage(); + usage(h5tools_getprogname()); leave(EXIT_SUCCESS); break; /* Create objects with the latest version of the format */ case 'l': - parms->latest = TRUE; + options->latest = TRUE; break; /* Create parent groups */ case 'p': - parms->parents = TRUE; + options->parents = TRUE; break; /* Verbose output */ case 'v': - parms->verbose = TRUE; + options->verbose = TRUE; break; /* Display version */ @@ -152,9 +175,25 @@ parse_command_line(int argc, const char *argv[], param_t *parms) leave(EXIT_SUCCESS); break; + case '1': + vol_info.type = VOL_BY_VALUE; + vol_info.u.value = (H5VL_class_value_t)HDatoi(opt_arg); + custom_fapl = TRUE; + break; + + case '2': + vol_info.type = VOL_BY_NAME; + vol_info.u.name = opt_arg; + custom_fapl = TRUE; + break; + + case '3': + vol_info.info_string = opt_arg; + break; + /* Bad command line argument */ default: - usage(); + usage(h5tools_getprogname()); leave(EXIT_FAILURE); } /* end switch */ } /* end while */ @@ -162,43 +201,51 @@ parse_command_line(int argc, const char *argv[], param_t *parms) /* Check for file name to be processed */ if(argc <= opt_ind) { error_msg("missing file name\n"); - usage(); + usage(h5tools_getprogname()); leave(EXIT_FAILURE); - } /* end if */ + } /* Retrieve file name */ - parms->fname = HDstrdup(argv[opt_ind]); + options->fname = HDstrdup(argv[opt_ind]); opt_ind++; /* Check for group(s) to be created */ if(argc <= opt_ind) { error_msg("missing group name(s)\n"); - usage(); + usage(h5tools_getprogname()); leave(EXIT_FAILURE); - } /* end if */ + } /* Allocate space for the group name pointers */ - parms->ngroups = (size_t)(argc - opt_ind); - parms->groups = (char **)HDmalloc(parms->ngroups * sizeof(char *)); + options->ngroups = (size_t)(argc - opt_ind); + options->groups = (char **)HDmalloc(options->ngroups * sizeof(char *)); /* Retrieve the group names */ curr_group = 0; while(opt_ind < argc) { - parms->groups[curr_group] = HDstrdup(argv[opt_ind]); + options->groups[curr_group] = HDstrdup(argv[opt_ind]); curr_group++; opt_ind++; - } /* end while */ + } + + /* Setup a custom fapl for file accesses */ + if (custom_fapl) { + if ((tmp_fapl_id = h5tools_get_fapl(options->fapl_id, &vol_info, NULL)) < 0) { + error_msg("failed to setup file access property list (fapl) for file\n"); + leave(EXIT_FAILURE); + } + + /* Close the old fapl */ + if (options->fapl_id != H5P_DEFAULT) + if (H5Pclose(options->fapl_id) < 0) { + error_msg("failed to close file access property list (fapl)\n"); + leave(EXIT_FAILURE); + } -#ifdef QAK -HDfprintf(stderr, "parms->parents = %t\n", parms->parents); -HDfprintf(stderr, "parms->verbose = %t\n", parms->verbose); -HDfprintf(stderr, "parms->fname = '%s'\n", parms->fname); -HDfprintf(stderr, "parms->ngroups = %Zu\n", parms->ngroups); -for(curr_group = 0; curr_group < parms->ngroups; curr_group++) - HDfprintf(stderr, "parms->group[%Zu] = '%s'\n", curr_group, parms->groups[curr_group]); -#endif /* QAK */ + options->fapl_id = tmp_fapl_id; + } - return(0); + return 0; } /* parse_command_line() */ @@ -214,10 +261,9 @@ for(curr_group = 0; curr_group < parms->ngroups; curr_group++) int main(int argc, const char *argv[]) { - hid_t fid; /* HDF5 file ID */ - hid_t fapl_id; /* File access property list ID */ - hid_t lcpl_id; /* Link creation property list ID */ - size_t curr_group; /* Current group to create */ + hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */ + hid_t lcpl_id = H5I_INVALID_HID; /* Link creation property list ID */ + size_t curr_group; /* Current group to create */ h5tools_setprogname(PROGRAMNAME); h5tools_setstatus(EXIT_SUCCESS); @@ -228,103 +274,99 @@ main(int argc, const char *argv[]) /* Initialize h5tools lib */ h5tools_init(); - /* Parse command line */ - HDmemset(¶ms, 0, sizeof(params)); - if(parse_command_line(argc, argv, ¶ms) < 0) { - error_msg("unable to parse command line arguments\n"); - leave(EXIT_FAILURE); - } /* end if */ + /* Initialize the parameters */ + HDmemset(¶ms_g, 0, sizeof(params_g)); /* Create file access property list */ - if((fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0) { + if((params_g.fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0) { error_msg("Could not create file access property list\n"); leave(EXIT_FAILURE); - } /* end if */ + } + + /* Parse command line */ + if(parse_command_line(argc, argv, ¶ms_g) < 0) { + error_msg("unable to parse command line arguments\n"); + leave(EXIT_FAILURE); + } /* Check for creating groups with new format version */ - if(params.latest) { + if(params_g.latest) { /* Set the "use the latest version of the format" bounds */ - if(H5Pset_libver_bounds(fapl_id, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) { + if(H5Pset_libver_bounds(params_g.fapl_id, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) { error_msg("Could not set property for using latest version of the format\n"); leave(EXIT_FAILURE); - } /* end if */ + } /* Display some output if requested */ - if(params.verbose) + if(params_g.verbose) HDprintf("%s: Creating groups with latest version of the format\n", h5tools_getprogname()); - } /* end if */ + } /* Attempt to open an existing HDF5 file first */ - fid = h5tools_fopen(params.fname, H5F_ACC_RDWR, fapl_id, FALSE, NULL, 0); + fid = h5tools_fopen(params_g.fname, H5F_ACC_RDWR, params_g.fapl_id, FALSE, NULL, 0); /* If we couldn't open an existing file, try creating file */ /* (use "EXCL" instead of "TRUNC", so we don't blow away existing non-HDF5 file) */ if(fid < 0) - fid = H5Fcreate(params.fname, H5F_ACC_EXCL, H5P_DEFAULT, fapl_id); + fid = H5Fcreate(params_g.fname, H5F_ACC_EXCL, H5P_DEFAULT, params_g.fapl_id); /* Test for error in opening file */ if(fid < 0) { - error_msg("Could not open output file '%s'\n", params.fname); + error_msg("Could not open output file '%s'\n", params_g.fname); leave(EXIT_FAILURE); - } /* end if */ + } /* Create link creation property list */ if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) { error_msg("Could not create link creation property list\n"); leave(EXIT_FAILURE); - } /* end if */ + } /* Check for creating intermediate groups */ - if(params.parents) { + if(params_g.parents) { /* Set the intermediate group creation property */ if(H5Pset_create_intermediate_group(lcpl_id, TRUE) < 0) { error_msg("Could not set property for creating parent groups\n"); leave(EXIT_FAILURE); - } /* end if */ + } /* Display some output if requested */ - if(params.verbose) + if(params_g.verbose) HDprintf("%s: Creating parent groups\n", h5tools_getprogname()); - } /* end if */ + } /* Loop over creating requested groups */ - for(curr_group = 0; curr_group < params.ngroups; curr_group++) { + for(curr_group = 0; curr_group < params_g.ngroups; curr_group++) { hid_t gid; /* Group ID */ /* Attempt to create a group */ - if((gid = H5Gcreate2(fid, params.groups[curr_group], lcpl_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) { - error_msg("Could not create group '%s'\n", params.groups[curr_group]); + if((gid = H5Gcreate2(fid, params_g.groups[curr_group], lcpl_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + error_msg("Could not create group '%s'\n", params_g.groups[curr_group]); leave(EXIT_FAILURE); - } /* end if */ + } /* Close the group */ if(H5Gclose(gid) < 0) { - error_msg("Could not close group '%s'??\n", params.groups[curr_group]); + error_msg("Could not close group '%s'??\n", params_g.groups[curr_group]); leave(EXIT_FAILURE); - } /* end if */ + } /* Display some output if requested */ - if(params.verbose) - HDprintf("%s: created group '%s'\n", h5tools_getprogname(), params.groups[curr_group]); + if(params_g.verbose) + HDprintf("%s: created group '%s'\n", h5tools_getprogname(), params_g.groups[curr_group]); } /* end for */ /* Close link creation property list */ if(H5Pclose(lcpl_id) < 0) { error_msg("Could not close link creation property list\n"); leave(EXIT_FAILURE); - } /* end if */ + } /* Close file */ if(H5Fclose(fid) < 0) { - error_msg("Could not close output file '%s'??\n", params.fname); - leave(EXIT_FAILURE); - } /* end if */ - - /* Close file access property list */ - if(H5Pclose(fapl_id) < 0) { - error_msg("Could not close file access property list\n"); + error_msg("Could not close output file '%s'??\n", params_g.fname); leave(EXIT_FAILURE); - } /* end if */ + } leave(EXIT_SUCCESS); } /* end main() */ diff --git a/tools/test/h5diff/testfiles/h5diff_10.txt b/tools/test/h5diff/testfiles/h5diff_10.txt index 11ad800..216ec1a 100644 --- a/tools/test/h5diff/testfiles/h5diff_10.txt +++ b/tools/test/h5diff/testfiles/h5diff_10.txt @@ -25,6 +25,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_600.txt b/tools/test/h5diff/testfiles/h5diff_600.txt index 13d627c..c515535 100644 --- a/tools/test/h5diff/testfiles/h5diff_600.txt +++ b/tools/test/h5diff/testfiles/h5diff_600.txt @@ -25,6 +25,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_603.txt b/tools/test/h5diff/testfiles/h5diff_603.txt index 0d6b474..7249d68 100644 --- a/tools/test/h5diff/testfiles/h5diff_603.txt +++ b/tools/test/h5diff/testfiles/h5diff_603.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_606.txt b/tools/test/h5diff/testfiles/h5diff_606.txt index 94f44e8..14f1115 100644 --- a/tools/test/h5diff/testfiles/h5diff_606.txt +++ b/tools/test/h5diff/testfiles/h5diff_606.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_612.txt b/tools/test/h5diff/testfiles/h5diff_612.txt index 7f83c64..6d447c8 100644 --- a/tools/test/h5diff/testfiles/h5diff_612.txt +++ b/tools/test/h5diff/testfiles/h5diff_612.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_615.txt b/tools/test/h5diff/testfiles/h5diff_615.txt index 3cfe6b9..5bb0cca 100644 --- a/tools/test/h5diff/testfiles/h5diff_615.txt +++ b/tools/test/h5diff/testfiles/h5diff_615.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_621.txt b/tools/test/h5diff/testfiles/h5diff_621.txt index 9c34945..8369159 100644 --- a/tools/test/h5diff/testfiles/h5diff_621.txt +++ b/tools/test/h5diff/testfiles/h5diff_621.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_622.txt b/tools/test/h5diff/testfiles/h5diff_622.txt index 2b2df2f..f7cd143 100644 --- a/tools/test/h5diff/testfiles/h5diff_622.txt +++ b/tools/test/h5diff/testfiles/h5diff_622.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_623.txt b/tools/test/h5diff/testfiles/h5diff_623.txt index 3e80438..0b73fcc 100644 --- a/tools/test/h5diff/testfiles/h5diff_623.txt +++ b/tools/test/h5diff/testfiles/h5diff_623.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/h5diff/testfiles/h5diff_624.txt b/tools/test/h5diff/testfiles/h5diff_624.txt index 7a2f585..dc2e433 100644 --- a/tools/test/h5diff/testfiles/h5diff_624.txt +++ b/tools/test/h5diff/testfiles/h5diff_624.txt @@ -26,6 +26,18 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Quiet mode. Do not produce output. --enable-error-stack Prints messages from the HDF5 error stack as they occur. + --src-vol-value Value (ID) of the VOL connector to use for opening the + input HDF5 file specified + --src-vol-name Name of the VOL connector to use for opening the input + HDF5 file specified + --src-vol-info VOL-specific info to pass to the VOL connector used for + opening the input HDF5 file specified + --dst-vol-value Value (ID) of the VOL connector to use for opening the + output HDF5 file specified + --dst-vol-name Name of the VOL connector to use for opening the output + HDF5 file specified + --dst-vol-info VOL-specific info to pass to the VOL connector used for + opening the output HDF5 file specified --follow-symlinks Follow symbolic links (soft links and external links and compare the) links' target objects. diff --git a/tools/test/misc/testfiles/h5mkgrp_help.txt b/tools/test/misc/testfiles/h5mkgrp_help.txt index ba130f6..9525230 100644 --- a/tools/test/misc/testfiles/h5mkgrp_help.txt +++ b/tools/test/misc/testfiles/h5mkgrp_help.txt @@ -5,3 +5,10 @@ usage: h5mkgrp [OPTIONS] FILE GROUP... -p, --parents No error if existing, make parent groups as needed -v, --verbose Print information about OBJECTS and OPTIONS -V, --version Print version number and exit + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified + diff --git a/tools/testfiles/h5dump-help.txt b/tools/testfiles/h5dump-help.txt index 95dfc3b..a122dee 100644 --- a/tools/testfiles/h5dump-help.txt +++ b/tools/testfiles/h5dump-help.txt @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/help-1.ls b/tools/testfiles/help-1.ls index 7409c16..0926c4c 100644 --- a/tools/testfiles/help-1.ls +++ b/tools/testfiles/help-1.ls @@ -46,6 +46,12 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] ...,,) If absent or A == '(,,,,)', all default values are used. Has no effect if vfd flag is not 'hdfs'. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified file/OBJECT Each object consists of an HDF5 file name optionally followed by a diff --git a/tools/testfiles/help-2.ls b/tools/testfiles/help-2.ls index 7409c16..0926c4c 100644 --- a/tools/testfiles/help-2.ls +++ b/tools/testfiles/help-2.ls @@ -46,6 +46,12 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] ...,,) If absent or A == '(,,,,)', all default values are used. Has no effect if vfd flag is not 'hdfs'. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified file/OBJECT Each object consists of an HDF5 file name optionally followed by a diff --git a/tools/testfiles/help-3.ls b/tools/testfiles/help-3.ls index 7409c16..0926c4c 100644 --- a/tools/testfiles/help-3.ls +++ b/tools/testfiles/help-3.ls @@ -46,6 +46,12 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] ...,,) If absent or A == '(,,,,)', all default values are used. Has no effect if vfd flag is not 'hdfs'. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified file/OBJECT Each object consists of an HDF5 file name optionally followed by a diff --git a/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl b/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl +++ b/tools/testfiles/pbits/tnofilename-with-packed-bits.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/pbits/tpbitsIncomplete.ddl b/tools/testfiles/pbits/tpbitsIncomplete.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tpbitsIncomplete.ddl +++ b/tools/testfiles/pbits/tpbitsIncomplete.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/pbits/tpbitsLengthExceeded.ddl b/tools/testfiles/pbits/tpbitsLengthExceeded.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tpbitsLengthExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsLengthExceeded.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/pbits/tpbitsLengthPositive.ddl b/tools/testfiles/pbits/tpbitsLengthPositive.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tpbitsLengthPositive.ddl +++ b/tools/testfiles/pbits/tpbitsLengthPositive.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/pbits/tpbitsMaxExceeded.ddl b/tools/testfiles/pbits/tpbitsMaxExceeded.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tpbitsMaxExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsMaxExceeded.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl b/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl +++ b/tools/testfiles/pbits/tpbitsOffsetExceeded.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/pbits/tpbitsOffsetNegative.ddl b/tools/testfiles/pbits/tpbitsOffsetNegative.ddl index 95dfc3b..a122dee 100644 --- a/tools/testfiles/pbits/tpbitsOffsetNegative.ddl +++ b/tools/testfiles/pbits/tpbitsOffsetNegative.ddl @@ -22,6 +22,12 @@ usage: h5dump [OPTIONS] files ,, ) Any absent attribute will use a default value. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified --------------- Object Options --------------- -a P, --attribute=P Print the specified attribute If an attribute name contains a slash (/), escape the diff --git a/tools/testfiles/textlinksrc-nodangle-1.ls b/tools/testfiles/textlinksrc-nodangle-1.ls index 7409c16..0926c4c 100644 --- a/tools/testfiles/textlinksrc-nodangle-1.ls +++ b/tools/testfiles/textlinksrc-nodangle-1.ls @@ -46,6 +46,12 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] ...,,) If absent or A == '(,,,,)', all default values are used. Has no effect if vfd flag is not 'hdfs'. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified file/OBJECT Each object consists of an HDF5 file name optionally followed by a diff --git a/tools/testfiles/tgroup-1.ls b/tools/testfiles/tgroup-1.ls index 7409c16..0926c4c 100644 --- a/tools/testfiles/tgroup-1.ls +++ b/tools/testfiles/tgroup-1.ls @@ -46,6 +46,12 @@ usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...] ...,,) If absent or A == '(,,,,)', all default values are used. Has no effect if vfd flag is not 'hdfs'. + --vol-value Value (ID) of the VOL connector to use for opening the + HDF5 file specified + --vol-name Name of the VOL connector to use for opening the + HDF5 file specified + --vol-info VOL-specific info to pass to the VOL connector used for + opening the HDF5 file specified file/OBJECT Each object consists of an HDF5 file name optionally followed by a -- cgit v0.12