From c2c5247183b90a68317d98f8f390df67b62b089c Mon Sep 17 00:00:00 2001 From: Dana Robinson <43805+derobins@users.noreply.github.com> Date: Tue, 27 Dec 2022 13:17:15 -0800 Subject: Brings Doxygen changes from develop (#2367) --- src/H5Dpublic.h | 6 +-- src/H5ESmodule.h | 2 +- src/H5ESpublic.h | 111 +++++++++++++++++++++++++++++--------- src/H5Epublic.h | 2 +- src/H5FDsubfiling/H5FDioc.h | 4 +- src/H5FDsubfiling/H5FDsubfiling.h | 4 +- src/H5Ppublic.h | 4 +- src/H5VLmodule.h | 16 ++---- src/H5VLpublic.h | 2 +- src/H5public.h | 4 +- 10 files changed, 104 insertions(+), 51 deletions(-) diff --git a/src/H5Dpublic.h b/src/H5Dpublic.h index f7d208d..fbce3d6 100644 --- a/src/H5Dpublic.h +++ b/src/H5Dpublic.h @@ -694,7 +694,7 @@ H5_DLL herr_t H5Dget_chunk_info_by_coord(hid_t dset_id, const hsize_t *offset, u * Iterate over all chunked datasets and chunks in a file. * \snippet H5D_examples.c H5Ovisit_cb * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5Dchunk_iter(hid_t dset_id, hid_t dxpl_id, H5D_chunk_iter_op_t cb, void *op_data); @@ -900,7 +900,7 @@ H5_DLL herr_t H5Dread(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_ * parallel, each rank must pass exactly the same list of datasets in * \p dset_id , though the other parameters may differ. * - * \since 1.13.3 + * \since 1.14.0 * * \see H5Dread() * @@ -1091,7 +1091,7 @@ H5_DLL herr_t H5Dwrite(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid * parallel, each rank must pass exactly the same list of datasets in * \p dset_id , though the other parameters may differ. * - * \since 1.13.3 + * \since 1.14.0 * * \see H5Dwrite() * diff --git a/src/H5ESmodule.h b/src/H5ESmodule.h index b05b7f4..1e333f7 100644 --- a/src/H5ESmodule.h +++ b/src/H5ESmodule.h @@ -39,7 +39,7 @@ * while the application is performing other tasks. * * To support AIO capabilities for the HDF5 VOL connectors, the AIO versions for the functions - * listed in the table below were added to HDF5 library version 1.13.0 and later. The async version + * listed in the table below were added to HDF5 library version 1.14.0 and later. The async version * of the function has “_async” suffix added to the function name. For example, the async version * for H5Fcreate is H5Fcreate_async. * diff --git a/src/H5ESpublic.h b/src/H5ESpublic.h index ecfd08f..f2c7cb5 100644 --- a/src/H5ESpublic.h +++ b/src/H5ESpublic.h @@ -40,30 +40,34 @@ /* Public Typedefs */ /*******************/ -/* Asynchronous operation status */ +/** + * Asynchronous operation status + */ typedef enum H5ES_status_t { - H5ES_STATUS_IN_PROGRESS, /* Operation(s) have not yet completed */ - H5ES_STATUS_SUCCEED, /* Operation(s) have completed, successfully */ - H5ES_STATUS_CANCELED, /* Operation(s) has been canceled */ - H5ES_STATUS_FAIL /* An operation has completed, but failed */ + H5ES_STATUS_IN_PROGRESS, /**< Operation(s) have not yet completed */ + H5ES_STATUS_SUCCEED, /**< Operation(s) have completed, successfully */ + H5ES_STATUS_CANCELED, /**< Operation(s) has been canceled */ + H5ES_STATUS_FAIL /**< An operation has completed, but failed */ } H5ES_status_t; -/* Information about operations in an event set */ +/** + * Information about operations in an event set + */ typedef struct H5ES_op_info_t { /* API call info */ - const char *api_name; /* Name of HDF5 API routine called */ - char *api_args; /* "Argument string" for arguments to HDF5 API routine called */ + const char *api_name; /**< Name of HDF5 API routine called */ + char *api_args; /**< "Argument string" for arguments to HDF5 API routine called */ /* Application info */ - const char *app_file_name; /* Name of source file where the HDF5 API routine was called */ - const char *app_func_name; /* Name of function where the HDF5 API routine was called */ - unsigned app_line_num; /* Line # of source file where the HDF5 API routine was called */ + const char *app_file_name; /**< Name of source file where the HDF5 API routine was called */ + const char *app_func_name; /**< Name of function where the HDF5 API routine was called */ + unsigned app_line_num; /**< Line # of source file where the HDF5 API routine was called */ /* Operation info */ - uint64_t op_ins_count; /* Counter of operation's insertion into event set */ - uint64_t op_ins_ts; /* Timestamp for when the operation was inserted into the event set */ - uint64_t op_exec_ts; /* Timestamp for when the operation began execution */ - uint64_t op_exec_time; /* Execution time for operation (in ns) */ + uint64_t op_ins_count; /**< Counter of operation's insertion into event set */ + uint64_t op_ins_ts; /**< Timestamp for when the operation was inserted into the event set */ + uint64_t op_exec_ts; /**< Timestamp for when the operation began execution */ + uint64_t op_exec_time; /**< Execution time for operation (in ns) */ } H5ES_op_info_t; //! @@ -115,7 +119,14 @@ How to Trace Async Operations? */ +/** + * Callback for H5ESregister_insert_func() + */ typedef int (*H5ES_event_insert_func_t)(const H5ES_op_info_t *op_info, void *ctx); + +/** + * Callback for H5ESregister_complete_func() + */ typedef int (*H5ES_event_complete_func_t)(const H5ES_op_info_t *op_info, H5ES_status_t status, hid_t err_stack, void *ctx); @@ -136,12 +147,12 @@ extern "C" { * * \brief Creates an event set * - * \returns \hid_ti{event set} + * \returns \hid_t{event set} * * \details H5EScreate() creates a new event set and returns a corresponding * event set identifier. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL hid_t H5EScreate(void); @@ -174,7 +185,7 @@ H5_DLL hid_t H5EScreate(void); * immediately if an operation fails. If a failure occurs, the value * returned for the number of operations in progress may be inaccurate. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESwait(hid_t es_id, uint64_t timeout, size_t *num_in_progress, hbool_t *err_occurred); @@ -192,7 +203,7 @@ H5_DLL herr_t H5ESwait(hid_t es_id, uint64_t timeout, size_t *num_in_progress, h * \details H5EScancel() attempts to cancel operations in an event set specified * by \p es_id. H5ES_NONE is a valid value for \p es_id, but functions as a no-op. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5EScancel(hid_t es_id, size_t *num_not_canceled, hbool_t *err_occurred); @@ -209,7 +220,7 @@ H5_DLL herr_t H5EScancel(hid_t es_id, size_t *num_not_canceled, hbool_t *err_occ * \details H5ESget_count() retrieves number of events in an event set specified * by \p es_id. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESget_count(hid_t es_id, size_t *count); @@ -230,7 +241,7 @@ H5_DLL herr_t H5ESget_count(hid_t es_id, size_t *count); * for matching operations inserted into the event set with possible * errors that occur. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESget_op_counter(hid_t es_id, uint64_t *counter); @@ -248,7 +259,7 @@ H5_DLL herr_t H5ESget_op_counter(hid_t es_id, uint64_t *counter); * \details H5ESget_err_status() checks if event set specified by es_id has * failed operations. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESget_err_status(hid_t es_id, hbool_t *err_occurred); @@ -268,7 +279,7 @@ H5_DLL herr_t H5ESget_err_status(hid_t es_id, hbool_t *err_occurred); * The function does not wait for active operations to complete, so * count may not include all failures. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESget_err_count(hid_t es_id, size_t *num_errs); @@ -292,13 +303,63 @@ H5_DLL herr_t H5ESget_err_count(hid_t es_id, size_t *num_errs); * \snippet this H5ES_err_info_t_snip * \click4more * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESget_err_info(hid_t es_id, size_t num_err_info, H5ES_err_info_t err_info[], size_t *err_cleared); +/** + * \ingroup H5ES + * + * \brief Convenience routine to free an array of H5ES_err_info_t structs + * + * \param[in] num_err_info The number of elements in \p err_info array + * \param[in] err_info Array of structures + * \returns \herr_t + * + * \since 1.14.0 + * + */ H5_DLL herr_t H5ESfree_err_info(size_t num_err_info, H5ES_err_info_t err_info[]); + +/** + * \ingroup H5ES + * + * \brief Registers a callback to invoke when a new operation is inserted into + * an event set + * + * \es_id + * \param[in] func The insert function to register + * \param[in] ctx User-specified information (context) to pass to \p func + * \returns \herr_t + * + * \details Only one insert callback can be registered for each event set. + * Registering a new callback will replace the existing one. + * H5ES_NONE is a valid value for 'es_id', but functions as a no-op + * + * \since 1.14.0 + * + */ H5_DLL herr_t H5ESregister_insert_func(hid_t es_id, H5ES_event_insert_func_t func, void *ctx); + +/** + * \ingroup H5ES + * + * \brief Registers a callback to invoke when an operation completes within an + * event set + * + * \es_id + * \param[in] func The completion function to register + * \param[in] ctx User-specified information (context) to pass to \p func + * \returns \herr_t + * + * \details Only one complete callback can be registered for each event set. + * Registering a new callback will replace the existing one. + * H5ES_NONE is a valid value for 'es_id', but functions as a no-op + * + * \since 1.14.0 + * + */ H5_DLL herr_t H5ESregister_complete_func(hid_t es_id, H5ES_event_complete_func_t func, void *ctx); /** @@ -311,7 +372,7 @@ H5_DLL herr_t H5ESregister_complete_func(hid_t es_id, H5ES_event_complete_func_t * * \details H5ESclose() terminates access to an event set specified by \p es_id. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5ESclose(hid_t es_id); diff --git a/src/H5Epublic.h b/src/H5Epublic.h index c01fa2b..dbc3457 100644 --- a/src/H5Epublic.h +++ b/src/H5Epublic.h @@ -314,7 +314,7 @@ H5_DLL hid_t H5Eget_current_stack(void); * If \p close_source_stack is \c TRUE, the source error stack * will be closed. * - * \since 1.13.0 + * \since 1.14.0 */ H5_DLL herr_t H5Eappend_stack(hid_t dst_stack_id, hid_t src_stack_id, hbool_t close_source_stack); /** diff --git a/src/H5FDsubfiling/H5FDioc.h b/src/H5FDsubfiling/H5FDioc.h index 516f483..bcacd52 100644 --- a/src/H5FDsubfiling/H5FDioc.h +++ b/src/H5FDsubfiling/H5FDioc.h @@ -146,7 +146,7 @@ H5_DLL hid_t H5FD_ioc_init(void); * If the two drivers differ in configuration settings, application behavior * may not be as expected. * - * \since 1.13.2 + * \since 1.14.0 * */ H5_DLL herr_t H5Pset_fapl_ioc(hid_t fapl_id, H5FD_ioc_config_t *vfd_config); @@ -170,7 +170,7 @@ H5_DLL herr_t H5Pset_fapl_ioc(hid_t fapl_id, H5FD_ioc_config_t *vfd_config); * values and then calling H5Pset_fapl_ioc() with the configured * H5FD_ioc_config_t structure. * - * \since 1.13.2 + * \since 1.14.0 * */ H5_DLL herr_t H5Pget_fapl_ioc(hid_t fapl_id, H5FD_ioc_config_t *config_out); diff --git a/src/H5FDsubfiling/H5FDsubfiling.h b/src/H5FDsubfiling/H5FDsubfiling.h index c2543fa..22dd906 100644 --- a/src/H5FDsubfiling/H5FDsubfiling.h +++ b/src/H5FDsubfiling/H5FDsubfiling.h @@ -336,7 +336,7 @@ H5_DLL hid_t H5FD_subfiling_init(void); * H5FD_subfiling_config_t documentation for information about configuration * for the #H5FD_SUBFILING driver. * - * \since 1.13.2 + * \since 1.14.0 * */ H5_DLL herr_t H5Pset_fapl_subfiling(hid_t fapl_id, const H5FD_subfiling_config_t *vfd_config); @@ -370,7 +370,7 @@ H5_DLL herr_t H5Pset_fapl_subfiling(hid_t fapl_id, const H5FD_subfiling_config_t * environment variables to get accurate values for the #H5FD_SUBFILING driver * properties. * - * \since 1.13.2 + * \since 1.14.0 * */ H5_DLL herr_t H5Pget_fapl_subfiling(hid_t fapl_id, H5FD_subfiling_config_t *config_out); diff --git a/src/H5Ppublic.h b/src/H5Ppublic.h index a4993ab..5d3774b 100644 --- a/src/H5Ppublic.h +++ b/src/H5Ppublic.h @@ -5329,7 +5329,7 @@ H5_DLL herr_t H5Pset_vol(hid_t plist_id, hid_t new_vol_id, const void *new_vol_i * \note The H5VL_CAP_FLAG_ASYNC flag can be checked to see if asynchronous * operations are supported by the VOL connector stack. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5Pget_vol_cap_flags(hid_t plist_id, uint64_t *cap_flags); @@ -8194,7 +8194,7 @@ H5_DLL herr_t H5Pget_mpio_no_collective_cause(hid_t plist_id, uint32_t *local_no * please see the documentation for that routine for details about * their use. * - * \since 1.13.0 + * \since 1.14.0 * */ H5_DLL herr_t H5Pset_dataset_io_hyperslab_selection(hid_t plist_id, unsigned rank, H5S_seloper_t op, diff --git a/src/H5VLmodule.h b/src/H5VLmodule.h index d6e65db..169134a 100644 --- a/src/H5VLmodule.h +++ b/src/H5VLmodule.h @@ -122,22 +122,14 @@ * specifying a name in the VOL plugin environment variable. * * \subsubsection subsubsec_vol_quick_use Use A VOL-Enabled HDF5 Library - * The virtual object layer was introduced in HDF5 1.12.0, however that version of the VOL is deprecated. - * VOL users should target HDF5 1.13.X, which is currently under development. The 1.13.X releases are - * considered ”unstable” in the sense that API calls, interfaces, and the file format may change in the - * 1.13.X release branches and we do not guarantee binary compatibility (”unstable” does NOT mean buggy). - * The next stable version of the library will be HDF5 1.14.0 which will release in 2023. The particular - * configuration of the library (serial vs parallel, thread-safe, debug vs production/release) does not - * matter. The VOL is a fundamental part of the library and cannot be disabled, so any build will do. + * The virtual object layer was introduced in HDF5 1.12.0, however that version of the VOL is deprecated + * due to inadequate support for pass-through connectors. These deficiencies have been addressed + * in HDF5 1.14.0, so VOL users and connector authors should target the 1.14.0 VOL API. * * On Windows, it’s probably best to use the same debug vs release configuration for the application and * all libraries in order to avoid C runtime (CRT) issues. Pre-2015 versions of Visual Studio are not * supported. * - * When working with a debug HDF5 library, it’s probably also wise to build with the ”memory sanity checking” - * feature disabled to avoid accidentally clobbering our memory tracking infrastructure when dealing with - * buffers obtained from the HDF5 library. This feature should be disabled by default in HDF5 1.13.X. - * * \subsubsection subsubsec_vol_quick_set Determine How You Will Set The VOL Connector * Fundamentally, setting a VOL connector involves modifying the file access property list (fapl) that will * be used to open or create the file. @@ -505,7 +497,7 @@ * \endcode * * \subsubsection subsubsec_vol_adapt_native Protect Native-Only API Calls - * In HDF5 1.13.0, a way to determine support for optional calls has been added. + * In HDF5 1.14.0, a way to determine support for optional calls has been added. * \code * herr_t H5VLquery_optional(hid_t obj_id, H5VL_subclass_t subcls, int opt_type, uint64_t *flags) * \endcode diff --git a/src/H5VLpublic.h b/src/H5VLpublic.h index 2683e0a..f32abda 100644 --- a/src/H5VLpublic.h +++ b/src/H5VLpublic.h @@ -414,7 +414,7 @@ H5_DLL herr_t H5VLquery_optional(hid_t obj_id, H5VL_subclass_t subcls, int opt_t * VOL connector object * \return \herr_t * - * \since 1.13.0 + * \since 1.14.0 */ H5_DLL herr_t H5VLobject_is_native(hid_t obj_id, hbool_t *is_native); diff --git a/src/H5public.h b/src/H5public.h index e9d8979..b746d04 100644 --- a/src/H5public.h +++ b/src/H5public.h @@ -449,7 +449,7 @@ H5_DLL herr_t H5open(void); * If the HDF5 library is initialized and closed more than once, the * \p func callback must be registered within each open/close cycle. * - * \since 1.13.0 + * \since 1.14.0 */ H5_DLL herr_t H5atclose(H5_atclose_func_t func, void *ctx); /** @@ -652,7 +652,7 @@ H5_DLL herr_t H5check_version(unsigned majnum, unsigned minnum, unsigned relnum) * after it has been closed. The value of \p is_terminating is * undefined if this routine fails. * - * \since 1.13.0 + * \since 1.14.0 */ H5_DLL herr_t H5is_library_terminating(hbool_t *is_terminating); /** -- cgit v0.12