/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; /** *
* Title: HDF Native Package (Java) Example *
** Description: this example shows how to create HDF5 datasets using the * "HDF Native Package (Java)". The example created the group structure and * datasets: * *
* "/" (root) * integer arrays * 2D 32-bit integer 20x10 * 3D 16-bit integer 20x10x5 * float arrays * 2D 64-bit double 20x10 * 3D 32-bit float 20x10x5 ** * */ public class HDF5DatasetCreate { private static String fname = "HDF5DatasetCreate.h5"; private static long[] dims2D = {20, 10}; private static long[] dims3D = {20, 10, 5}; private static void CreateDataset() { long file_id = HDF5Constants.H5I_INVALID_HID; long group_id1 = HDF5Constants.H5I_INVALID_HID; long group_id2 = HDF5Constants.H5I_INVALID_HID; long dataspace_id1 = HDF5Constants.H5I_INVALID_HID; long dataspace_id2 = HDF5Constants.H5I_INVALID_HID; long dataset_id = HDF5Constants.H5I_INVALID_HID; // Create a new file using default properties. try { file_id = H5.H5Fcreate(fname, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); System.err.println("Failed to create file:" + fname); return; } // Create a group in the file. try { if (file_id >= 0) { group_id1 = H5.H5Gcreate(file_id, "g1", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); group_id2 = H5.H5Gcreate(file_id, "g2", HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } } catch (Exception e) { e.printStackTrace(); } // Create the data space for the 2D dataset. try { dataspace_id1 = H5.H5Screate_simple(2, dims2D, null); } catch (Exception e) { e.printStackTrace(); } // Create the data space for the 3D dataset. try { dataspace_id2 = H5.H5Screate_simple(3, dims3D, null); } catch (Exception e) { e.printStackTrace(); } // create 2D 32-bit (4 bytes) integer dataset of 20 by 10 try { if ((group_id1 >= 0) && (dataspace_id1 >= 0)) { dataset_id = H5.H5Dcreate( group_id1, "2D 32-bit integer 20x10", HDF5Constants.H5T_NATIVE_INT32, dataspace_id1, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (dataset_id >= 0) H5.H5Dclose(dataset_id); } } catch (Exception e) { e.printStackTrace(); } // create 3D 8-bit (1 byte) unsigned integer dataset of 20 by 10 by 5 try { if ((group_id1 >= 0) && (dataspace_id2 >= 0)) { dataset_id = H5.H5Dcreate(group_id1, "3D 8-bit unsigned integer 20x10x5", HDF5Constants.H5T_NATIVE_INT8, dataspace_id2, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (dataset_id >= 0) H5.H5Dclose(dataset_id); } } catch (Exception e) { e.printStackTrace(); } // create 2D 64-bit (8 bytes) double dataset of 20 by 10 try { if ((group_id2 >= 0) && (dataspace_id1 >= 0)) { dataset_id = H5.H5Dcreate( group_id2, "2D 64-bit double 20x10", HDF5Constants.H5T_NATIVE_DOUBLE, dataspace_id1, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (dataset_id >= 0) H5.H5Dclose(dataset_id); } } catch (Exception e) { e.printStackTrace(); } // create 3D 32-bit (4 bytes) float dataset of 20 by 10 by 5 try { if ((group_id2 >= 0) && (dataspace_id2 >= 0)) { dataset_id = H5.H5Dcreate( group_id2, "3D 32-bit float 20x10x5", HDF5Constants.H5T_NATIVE_FLOAT, dataspace_id2, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); if (dataset_id >= 0) H5.H5Dclose(dataset_id); } } catch (Exception e) { e.printStackTrace(); } // Terminate access to the data space. try { if (dataspace_id2 >= 0) H5.H5Sclose(dataspace_id2); } catch (Exception e) { e.printStackTrace(); } try { if (dataspace_id1 >= 0) H5.H5Sclose(dataspace_id1); } catch (Exception e) { e.printStackTrace(); } // Close the groups. try { if (group_id2 >= 0) H5.H5Gclose(group_id2); } catch (Exception e) { e.printStackTrace(); } try { if (group_id1 >= 0) H5.H5Gclose(group_id1); } catch (Exception e) { e.printStackTrace(); } // Close the file. try { if (file_id >= 0) H5.H5Fclose(file_id); } catch (Exception e) { e.printStackTrace(); } } public static void main(String[] args) { HDF5DatasetCreate.CreateDataset(); } }