/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include #include #include "H5Include.h" #include "H5Exception.h" #include "H5IdComponent.h" #include "H5PropList.h" #include "H5FaccProp.h" #include "H5FcreatProp.h" #include "H5OcreatProp.h" #include "H5DcreatProp.h" #include "H5DxferProp.h" #include "H5LcreatProp.h" #include "H5LaccProp.h" #include "H5DaccProp.h" #include "H5Location.h" #include "H5Object.h" #include "H5AbstractDs.h" #include "H5DataSpace.h" #include "H5DataSet.h" #include "H5CommonFG.h" #include "H5Attribute.h" #include "H5Group.h" #include "H5File.h" #include "H5Alltypes.h" namespace H5 { using std::cerr; using std::endl; //-------------------------------------------------------------------------- // Function: Group default constructor ///\brief Default constructor: creates a stub Group. //-------------------------------------------------------------------------- Group::Group() : H5Object(), CommonFG(), id(H5I_INVALID_HID) { } //-------------------------------------------------------------------------- // Function: Group copy constructor ///\brief Copy constructor: same HDF5 object as \a original ///\param original - IN: Original group to copy //-------------------------------------------------------------------------- Group::Group(const Group &original) : H5Object(), CommonFG(), id(original.id) { incRefCount(); // increment number of references to this id } //-------------------------------------------------------------------------- // Function: Group::closeObjId ///\brief Closes an object, which was opened with Group::getObjId /// ///\exception H5::FileIException or H5::GroupIException //-------------------------------------------------------------------------- void Group::closeObjId(hid_t obj_id) const { herr_t ret_value = H5Oclose(obj_id); if (ret_value < 0) { throwException("Group::closeObjId", "H5Oclose failed"); } } //-------------------------------------------------------------------------- // Function: Group::getLocId // Purpose: Get the id of this group // Description // This function is a redefinition of CommonFG::getLocId. It // is used by CommonFG member functions to get the file id. // Deprecated: // Aug 18, 2016 -BMR // After HDFFV-9920, the Group's methods can use getId() and // getLocId() is kept for backward compatibility. //-------------------------------------------------------------------------- hid_t Group::getLocId() const { return (getId()); } //-------------------------------------------------------------------------- // Function: Group overloaded constructor ///\brief Creates a Group object using the id of an existing group. ///\param existing_id - IN: Id of an existing group //-------------------------------------------------------------------------- Group::Group(const hid_t existing_id) : H5Object(), CommonFG(), id(existing_id) { incRefCount(); // increment number of references to this id } //-------------------------------------------------------------------------- // Function: Group overload constructor - dereference ///\brief Given a reference, ref, to an hdf5 group, creates a Group object ///\param loc - IN: Specifying location referenced object is in ///\param ref - IN: Reference pointer ///\param ref_type - IN: Reference type - default to H5R_OBJECT ///\param plist - IN: Property list - default to PropList::DEFAULT ///\exception H5::ReferenceException ///\par Description /// \c obj can be DataSet, Group, or named DataType, that /// is a datatype that has been named by DataType::commit. //-------------------------------------------------------------------------- Group::Group(const H5Location &loc, const void *ref, H5R_type_t ref_type, const PropList &plist) : H5Object(), CommonFG(), id(H5I_INVALID_HID) { id = H5Location::p_dereference(loc.getId(), ref, ref_type, plist, "constructor - by dereference"); } //-------------------------------------------------------------------------- // Function: Group::getNumObjs ///\brief Returns the number of objects in this group. ///\return Number of objects ///\exception H5::FileIException or H5::GroupIException //-------------------------------------------------------------------------- hsize_t Group::getNumObjs() const { H5G_info_t ginfo; // Group information herr_t ret_value = H5Gget_info(getId(), &ginfo); if (ret_value < 0) throwException("getNumObjs", "H5Gget_info failed"); return (ginfo.nlinks); } //-------------------------------------------------------------------------- // Function: Group::getObjId ///\brief Opens an object via object header. ///\param obj_name - IN: Path to the object ///\param plist - IN: Access property list for the link pointing to /// the object ///\exception H5::FileIException or H5::GroupIException ///\par Description /// This function opens an object in a group or file, using /// H5Oopen. Thus, an object can be opened without knowing /// the object's type. //-------------------------------------------------------------------------- hid_t Group::getObjId(const char *obj_name, const PropList &plist) const { hid_t ret_value = H5Oopen(getId(), obj_name, plist.getId()); if (ret_value < 0) { throwException("Group::getObjId", "H5Oopen failed"); } return (ret_value); } //-------------------------------------------------------------------------- // Function: Group::getObjId ///\brief This is an overloaded member function, provided for convenience. /// It takes a reference to a \c H5std_string for the object's name. ///\param obj_name - IN: Path to the object ///\param plist - IN: Access property list for the link pointing to /// the object ///\exception H5::FileIException or H5::GroupIException //-------------------------------------------------------------------------- hid_t Group::getObjId(const H5std_string &obj_name, const PropList &plist) const { return (getObjId(obj_name.c_str(), plist)); } //-------------------------------------------------------------------------- // Function: Group::getId ///\brief Get the id of this group ///\return Group identifier // Modification: // May 2008 - BMR // Class hierarchy is revised to address bugzilla 1068. Class // AbstractDS and Attribute are moved out of H5Object. In // addition, member IdComponent::id is moved into subclasses, and // IdComponent::getId now becomes pure virtual function. //-------------------------------------------------------------------------- hid_t Group::getId() const { return (id); } #ifndef DOXYGEN_SHOULD_SKIP_THIS //-------------------------------------------------------------------------- // Function: Group::p_setId ///\brief Sets the identifier of this object to a new value. /// ///\exception H5::IdComponentException when the attempt to close the HDF5 /// object fails // Description: // The underlying reference counting in the C library ensures // that the current valid id of this object is properly closed. // Then the object's id is reset to the new id. //-------------------------------------------------------------------------- void Group::p_setId(const hid_t new_id) { // handling references to this old id try { close(); } catch (Exception &close_error) { throwException("Group::p_setId", close_error.getDetailMsg()); } // reset object's id to the given id id = new_id; } #endif // DOXYGEN_SHOULD_SKIP_THIS //-------------------------------------------------------------------------- // Function: Group::close ///\brief Closes this group. /// ///\exception H5::GroupIException //-------------------------------------------------------------------------- void Group::close() { if (p_valid_id(id)) { herr_t ret_value = H5Gclose(id); if (ret_value < 0) { throwException("Group::close", "H5Gclose failed"); } // reset the id id = H5I_INVALID_HID; } } //-------------------------------------------------------------------------- // Function: Group::throwException ///\brief Throws H5::GroupIException. ///\param func_name - Name of the function where failure occurs ///\param msg - Message describing the failure ///\exception H5::GroupIException // Description // This function is also used in H5Location's methods so that // proper exception can be thrown for file or group. The // "Group::" will be inserted to indicate the function called is // an implementation of Group. //-------------------------------------------------------------------------- void Group::throwException(const H5std_string &func_name, const H5std_string &msg) const { H5std_string full_name = func_name; full_name.insert(0, "Group::"); throw GroupIException(full_name, msg); } //-------------------------------------------------------------------------- // Function: Group destructor ///\brief Properly terminates access to this group. // Modification // - Replaced resetIdComponent() with decRefCount() to use C // library ID reference counting mechanism - BMR, Feb 20, 2005 // - Replaced decRefCount with close() to let the C library // handle the reference counting - BMR, Jun 1, 2006 //-------------------------------------------------------------------------- Group::~Group() { try { close(); } catch (Exception &close_error) { cerr << "Group::~Group - " << close_error.getDetailMsg() << endl; } } //-------------------------------------------------------------------------- // Function: Copy assignment operator Group & Group::operator=(const Group &original) { if (&original != this) { setId(original.id); } return *this; } } // namespace H5