/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /***************************************************************************** FILE tobject.cpp - HDF5 C++ testing object related functionality ***************************************************************************/ #ifdef OLD_HEADER_FILENAME #include #else #include #endif using std::cerr; using std::endl; #include #include "H5Cpp.h" // C++ API header file using namespace H5; #include "h5cpputil.h" // C++ utilility header file const H5std_string FILE_OBJECTS("tobjects.h5"); const H5std_string FILE_OBJHDR("tobject_header.h5"); const H5std_string GROUP1("Top Group"); const H5std_string GROUP1_PATH("/Top Group"); const H5std_string GROUP1_1("Sub-Group 1.1"); const H5std_string GROUP1_1_PATH("/Top Group/Sub-Group 1.1"); const H5std_string GROUP1_2("Sub-Group 1.2"); const H5std_string GROUP1_2_PATH("/Top Group/Sub-Group 1.2"); const H5std_string DSET_DEFAULT_NAME("default"); const H5std_string DSET_IN_FILE("Dataset in File"); const H5std_string DSET_IN_FILE_PATH("/Dataset in File"); const H5std_string DSET_IN_GRP1("Dataset in Group 1"); const H5std_string DSET_IN_GRP1_PATH("/Top Group/Dataset in Group 1"); const H5std_string DSET_IN_GRP1_2("Dataset in Group 1.2"); const H5std_string DSET_IN_GRP1_2_PATH("/Top Group/Sub-Group 1.2/Dataset in Group 1.2"); /*------------------------------------------------------------------------- * Function: test_get_objname * * Purpose: Tests getting object name of groups and datasets. * * Return: Success: 0 * Failure: -1 * * Programmer: Binh-Minh Ribler * Friday, March 4, 2014 * *------------------------------------------------------------------------- */ static void test_get_objname() { SUBTEST("H5Object::getObjName on Groups and Datasets"); try { // Create file H5File file(FILE_OBJECTS, H5F_ACC_TRUNC); // Create a top group and 2 subgroups Group grp1 = file.createGroup(GROUP1, 0); Group grp1_1 = grp1.createGroup(GROUP1_1, 0); Group grp1_2 = grp1.createGroup(GROUP1_2, 0); // Attempted to create a same group to generate a failure, which should // be caught with sub-class exception clause, if available. try { Group grp1_2 = grp1.createGroup(GROUP1_2, 0); } catch (GroupIException& E) {} // do nothing, exception expected catch (Exception& E) { cerr << "Exception should have been caught by the previous catch" << endl; issue_fail_msg("test_get_objname", __LINE__, __FILE__); } // Get part of the group's name, random length using // ssize_t getObjName(char* comment, size_t buf_size) // Get the length of the group's name first ssize_t name_len = grp1.getObjName(NULL); // Random length is 4 if (name_len > 4) { char* grp1_name = new char[5]; name_len = grp1.getObjName(grp1_name, 5); verify_val((const char*)grp1_name, "/Top", "Group::getObjName", __LINE__, __FILE__); delete []grp1_name; } // Create a data space hsize_t dims[2]; dims[0] = 2; dims[1] = 5; DataSpace space (2, dims, NULL); // Create a dataset in the file DataSet dsinfile = file.createDataSet(DSET_IN_FILE, PredType::NATIVE_DOUBLE, space); // Create a dataset in the group DataSet dsingrp = grp1.createDataSet(DSET_IN_GRP1, PredType::NATIVE_INT, space); // Get and verify the name of each dataset, using // H5std_string getObjName() and // ssize_t getObjName(H5std_string& obj_name, size_t len = 0) H5std_string ds_name = dsinfile.getObjName(); verify_val(ds_name, DSET_IN_FILE_PATH, "DataSet::getObjName", __LINE__, __FILE__); name_len = dsingrp.getObjName(ds_name); // default len verify_val(ds_name, DSET_IN_GRP1_PATH, "DataSet::getObjName", __LINE__, __FILE__); // Close dataset dsingrp.close(); // Create a dataset in sub-group 1.2 dsingrp = grp1_2.createDataSet(DSET_IN_GRP1_2, PredType::NATIVE_INT, space); // Get and verify the name of the dataset that belongs to subgroup // 1.2, using H5std_string getObjName() ds_name = dsingrp.getObjName(); verify_val(ds_name, DSET_IN_GRP1_2_PATH, "DataSet::getObjName", __LINE__, __FILE__); // Close dataset dsingrp.close(); // Reopen that same dataset then check the name again with another // overload: ssize_t getObjName(H5std_string& obj_name, size_t len = 0) dsingrp = grp1_2.openDataSet(DSET_IN_GRP1_2); name_len = dsingrp.getObjName(ds_name); verify_val(ds_name, DSET_IN_GRP1_2_PATH, "DataSet::getObjName", __LINE__, __FILE__); // Everything will be closed as they go out of scope PASSED(); } // try block // catch all other exceptions catch (Exception& E) { issue_fail_msg("test_get_objname", __LINE__, __FILE__); } } // test_get_objname /*------------------------------------------------------------------------- * Function: test_get_objname_ontypes * * Purpose: Test getting object name from various committed types. * * Return: Success: 0 * Failure: -1 * * Programmer: Binh-Minh Ribler * March 4, 2014 * *------------------------------------------------------------------------- */ static void test_get_objname_ontypes() { SUBTEST("H5Object::getObjName on Committed Datatypes"); try { // Create a file with default prop lists H5File file(FILE_OBJECTS, H5F_ACC_RDWR); // Create a group Group grp = file.createGroup ("typetests"); // Create a datatype and save it IntType inttype(PredType::STD_B8LE); inttype.commit(file, "INT type of STD_B8LE"); // Close the type then open it again to test getting its name inttype.close(); inttype = file.openIntType("INT type of STD_B8LE"); // Get and verify its name H5std_string inttype_name = inttype.getObjName(); verify_val(inttype_name, "/INT type of STD_B8LE", "DataType::getObjName", __LINE__, __FILE__); // Make copy of a predefined type and save it DataType dtype(PredType::STD_B8LE); dtype.commit(file, "STD_B8LE"); // Close the data type and file dtype.close(); file.close(); // Re-open the file and the data type to test getting its name file.openFile(FILE_OBJECTS, H5F_ACC_RDWR); dtype = file.openDataType("STD_B8LE"); // Get and verify its name H5std_string type_name = dtype.getObjName(); verify_val(type_name, "/STD_B8LE", "DataType::getObjName", __LINE__, __FILE__); // Test getting type's name from copied type DataType copied_type; copied_type.copy(dtype); copied_type.commit(file, "copy of STD_B8LE"); type_name = copied_type.getObjName(); verify_val(type_name, "/copy of STD_B8LE", "DataType::getObjName", __LINE__, __FILE__); // Test copying an integer predefined type IntType new_int_type(PredType::NATIVE_INT); // Name this datatype new_int_type.commit(grp, "IntType NATIVE_INT"); ssize_t name_len = new_int_type.getObjName(type_name); // default len verify_val(name_len, (ssize_t)HDstrlen("/typetests/IntType NATIVE_INT"), "DataType::getObjName", __LINE__, __FILE__); verify_val(type_name, "/typetests/IntType NATIVE_INT", "DataType::getObjName", __LINE__, __FILE__); // Close everything or they can be closed when objects go out of scope dtype.close(); copied_type.close(); new_int_type.close(); grp.close(); PASSED(); } // end top try block catch (Exception& E) { issue_fail_msg("test_get_objname_ontypes", __LINE__, __FILE__); } } // test_get_objname_ontypes /*------------------------------------------------------------------------- * Function: test_get_objtype * * Purpose: Tests getting object type * * Return: Success: 0 * Failure: -1 * * Programmer: Binh-Minh Ribler * Friday, March 4, 2014 * *------------------------------------------------------------------------- */ static void test_get_objtype() { SUBTEST("H5File::childObjType and H5Group::childObjType"); try { // Open file H5File file(FILE_OBJECTS, H5F_ACC_RDWR); // Open the top group Group grp1 = file.openGroup(GROUP1); // Create a datatype and save it DataType dtype(PredType::STD_I32LE); dtype.commit(grp1, "STD_I32LE"); // Get and verify object type with // H5O_type_t childObjType(const H5std_string& objname) H5O_type_t objtype = file.childObjType(DSET_IN_FILE); verify_val(objtype, H5O_TYPE_DATASET, "H5File::childObjType", __LINE__, __FILE__); // Get and verify object type with // H5O_type_t childObjType(const char* objname) objtype = grp1.childObjType(GROUP1_1.c_str()); verify_val(objtype, H5O_TYPE_GROUP, "Group::childObjType", __LINE__, __FILE__); // Get and verify object type with // H5O_type_t childObjType(hsize_t index, H5_index_t index_type, // H5_iter_order_t order, const char* objname=".") objtype = grp1.childObjType((hsize_t)1, H5_INDEX_NAME, H5_ITER_INC); verify_val(objtype, H5O_TYPE_NAMED_DATATYPE, "Group::childObjType", __LINE__, __FILE__); // Get and verify object type with // H5O_type_t childObjType(hsize_t index, // H5_index_t index_type=H5_INDEX_NAME, // H5_iter_order_t order=H5_ITER_INC, const char* objname=".") objtype = grp1.childObjType((hsize_t)2); verify_val(objtype, H5O_TYPE_GROUP, "Group::childObjType", __LINE__, __FILE__); // Everything will be closed as they go out of scope PASSED(); } // try block // catch all other exceptions catch (Exception& E) { issue_fail_msg("test_get_objtype", __LINE__, __FILE__); } } // test_get_objtype /*------------------------------------------------------------------------- * Function: test_open_object_header * * Purpose: Test H5Location::openObjId function. * * Return: None * * Programmer: Binh-Minh Ribler (use C version) * May 15, 2017 * *------------------------------------------------------------------------- */ const H5std_string GROUPNAME("group"); const H5std_string NOGROUPNAME("non-existent-group"); const H5std_string DTYPENAME("group/datatype"); const H5std_string DTYPENAME_INGRP("datatype"); const H5std_string DSETNAME("dataset"); #define RANK 2 #define DIM0 5 #define DIM1 10 static void test_open_object_header() { hsize_t dims[2]; H5G_info_t ginfo; /* Group info struct */ // Output message about test being performed SUBTEST("H5Location::openObjId and H5Location::closeObjId"); try { // Create file FILE1 H5File file1(FILE_OBJHDR, H5F_ACC_TRUNC); /* Create a group, dataset, and committed datatype within the file */ // Create a group in the root group Group grp(file1.createGroup(GROUPNAME)); // Commit the type inside the file IntType dtype(PredType::NATIVE_INT); dtype.commit(file1, DTYPENAME); dtype.close(); // Create a new dataset in the file dims[0] = DIM0; dims[1] = DIM1; DataSpace dspace(RANK, dims); DataSet dset(file1.createDataSet(DSETNAME, PredType::NATIVE_INT, dspace)); // Create a dataset in the group DataSet dsingrp(grp.createDataSet(DSET_IN_GRP1, PredType::NATIVE_INT, dspace)); // Close dataset, dataspace, and group dset.close(); dspace.close(); grp.close(); // Now make sure that openObjId can open all three types of objects hid_t obj_grp = file1.openObjId(GROUPNAME); hid_t obj_dtype = file1.openObjId(DTYPENAME); hid_t obj_dset = file1.openObjId(DSETNAME); // Make sure that each is the right kind of ID H5I_type_t id_type = IdComponent::getHDFObjType(obj_grp); verify_val(id_type, H5I_GROUP, "H5Iget_type for group ID", __LINE__, __FILE__); id_type = IdComponent::getHDFObjType(obj_dtype); verify_val(id_type, H5I_DATATYPE, "H5Iget_type for datatype ID", __LINE__, __FILE__); id_type = IdComponent::getHDFObjType(obj_dset); verify_val(id_type, H5I_DATASET, "H5Iget_type for dataset ID", __LINE__, __FILE__); /* Do something more complex with each of the IDs to make sure */ Group grp2(obj_grp); hsize_t num_objs = grp2.getNumObjs(); verify_val(num_objs, 2, "H5Gget_info", __LINE__, __FILE__); // Close datatype object opened from the file H5Location::closeObjId(obj_dtype); // Do a few things using the dset object identifier dset.setId(obj_dset); dspace = dset.getSpace(); bool is_simple = dspace.isSimple(); dspace.close(); // Open datatype object from the group obj_dtype = grp2.openObjId(DTYPENAME_INGRP); // Do a few things using the datatype object identifier dtype.setId(obj_dtype); H5T_class_t type_class = dtype.getClass(); verify_val(type_class, H5T_INTEGER, "H5Tget_class", __LINE__, __FILE__); dtype.close(); // Close datatype object H5Location::closeObjId(obj_dtype); // Close the group object H5Location::closeObjId(obj_grp); // Try doing something with group, the ID should still work num_objs = grp2.getNumObjs(); verify_val(num_objs, 2, "H5Gget_info", __LINE__, __FILE__); // Close the cloned group grp2.close(); // Attempted to open a non-existing group, which should // be caught with sub-class exception clause, if available. try { Group grp3 = dsingrp.openObjId(NOGROUPNAME); } catch (DataSetIException& E) {} // do nothing, exception expected and caught correctly catch (Exception& E) { cerr << "Exception should have been caught by the previous catch" << endl; issue_fail_msg("test_get_objname", __LINE__, __FILE__); } PASSED(); } // end of try block // catch invalid action exception catch (InvalidActionException& E) { cerr << " in InvalidActionException" << endl; cerr << " *FAILED*" << endl; cerr << " <<< " << E.getDetailMsg() << " >>>" << endl << endl; } // catch all other exceptions catch (Exception& E) { issue_fail_msg("test_file_name()", __LINE__, __FILE__, E.getCDetailMsg()); } } /* test_open_object_header() */ /*------------------------------------------------------------------------- * Function: test_is_valid * * Purpose: Tests validating IDs. * * Return: Success: 0 * Failure: -1 * * Programmer: Binh-Minh Ribler * May 15, 2017 * *------------------------------------------------------------------------- */ static void test_is_valid() { SUBTEST("IdComponent::isValid"); try { // Create a datatype IntType int1(PredType::NATIVE_INT); // Check that the ID is valid hid_t int1_id = int1.getId(); bool is_valid = IdComponent::isValid(int1_id); verify_val(is_valid, true, "IdComponent::isValid", __LINE__, __FILE__); // Create another datatype FloatType float1(PredType::NATIVE_FLOAT); // Check that the ID is valid is_valid = IdComponent::isValid(float1.getId()); verify_val(is_valid, true, "IdComponent::isValid", __LINE__, __FILE__); // Close the integer type, then check the id, it should no longer be valid int1.close(); is_valid = IdComponent::isValid(int1_id); verify_val(is_valid, false, "IdComponent::isValid", __LINE__, __FILE__); // Check that an id of -1 is invalid is_valid = IdComponent::isValid((hid_t)-1); verify_val(is_valid, false, "IdComponent::isValid", __LINE__, __FILE__); PASSED(); } // try block // catch all other exceptions catch (Exception& E) { issue_fail_msg("test_get_objtype", __LINE__, __FILE__, E.getCDetailMsg()); } } // test_is_valid /*------------------------------------------------------------------------- * Function: test_objects * * Purpose: Tests HDF5 object related functionality * * Return: Success: 0 * Failure: -1 * * Programmer: Binh-Minh Ribler * Friday, Mar 4, 2014 * *------------------------------------------------------------------------- */ extern "C" void test_object() { // Output message about test being performed MESSAGE(5, ("Testing Object Functions\n")); test_get_objname(); // Test get object name from groups/datasets test_get_objname_ontypes(); // Test get object name from types test_get_objtype(); // Test get object type test_is_valid(); // Test validating IDs test_open_object_header(); // Test object header functions (H5O) } // test_objects /*------------------------------------------------------------------------- * Function: cleanup_objects * * Purpose: Cleanup temporary test files * * Return: none * * Programmer: (use C version) * *------------------------------------------------------------------------- */ extern "C" void cleanup_object() { HDremove(FILE_OBJECTS.c_str()); } // cleanup_objects