!****h* ROBODoc/H5LIB ! ! NAME ! MODULE H5LIB ! ! PURPOSE ! This module provides fortran specific helper functions for the HDF library ! ! COPYRIGHT ! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * ! Copyright by The HDF Group. * ! Copyright by the Board of Trustees of the University of Illinois. * ! All rights reserved. * ! * ! This file is part of HDF5. The full HDF5 copyright notice, including * ! terms governing use, modification, and redistribution, is contained in * ! the COPYING file, which can be found at the root of the source code * ! distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * ! If you do not have access to either file, you may request a copy from * ! help@hdfgroup.org. * ! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * ! ! NOTES ! _____ __ __ _____ ____ _____ _______ _ _ _______ ! |_ _| \/ | __ \ / __ \| __ \__ __|/\ | \ | |__ __| ! **** | | | \ / | |__) | | | | |__) | | | / \ | \| | | | **** ! **** | | | |\/| | ___/| | | | _ / | | / /\ \ | . ` | | | **** ! **** _| |_| | | | | | |__| | | \ \ | |/ ____ \| |\ | | | **** ! |_____|_| |_|_| \____/|_| \_\ |_/_/ \_\_| \_| |_| ! ! If you add a new function you must add the function name to the ! Windows dll file 'hdf5_fortrandll.def.in' in the fortran/src directory. ! This is needed for Windows based operating systems. ! !***** #include MODULE H5LIB USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR, C_INTPTR_T USE H5GLOBAL IMPLICIT NONE PRIVATE ! ! H5F flags declaration ! INTEGER, PARAMETER :: H5F_FLAGS_LEN = 19 INTEGER, DIMENSION(1:H5F_FLAGS_LEN) :: H5F_flags ! ! H5generic flags declaration ! INTEGER, PARAMETER :: H5generic_FLAGS_LEN = 9 INTEGER, DIMENSION(1:H5generic_FLAGS_LEN) :: H5generic_flags INTEGER, PARAMETER :: H5generic_haddr_FLAGS_LEN = 1 INTEGER(HADDR_T), DIMENSION(1:H5generic_haddr_FLAGS_LEN) :: H5generic_haddr_flags ! ! H5G flags declaration ! INTEGER, PARAMETER :: H5G_FLAGS_LEN = 12 INTEGER, DIMENSION(1:H5G_FLAGS_LEN) :: H5G_flags ! ! H5D flags declaration ! INTEGER, PARAMETER :: H5D_FLAGS_LEN = 29 INTEGER, DIMENSION(1:H5D_FLAGS_LEN) :: H5D_flags INTEGER, PARAMETER :: H5D_SIZE_FLAGS_LEN = 2 INTEGER(SIZE_T), DIMENSION(1:H5D_SIZE_FLAGS_LEN) :: H5D_size_flags ! ! H5E flags declaration ! INTEGER, PARAMETER :: H5E_FLAGS_LEN = 4 INTEGER, DIMENSION(1:H5E_FLAGS_LEN) :: H5E_flags INTEGER, PARAMETER :: H5E_HID_FLAGS_LEN = 1 INTEGER(HID_T), DIMENSION(1:H5E_HID_FLAGS_LEN) :: H5E_hid_flags ! ! H5FD flags declaration ! INTEGER, PARAMETER :: H5FD_FLAGS_LEN = 11 INTEGER, DIMENSION(1:H5FD_FLAGS_LEN) :: H5FD_flags ! ! H5FD file drivers flags declaration ! INTEGER, PARAMETER :: H5FD_HID_FLAGS_LEN = 7 INTEGER(HID_T), DIMENSION(1:H5FD_HID_FLAGS_LEN) :: H5FD_hid_flags ! ! H5I flags declaration ! INTEGER, PARAMETER :: H5I_FLAGS_LEN = 7 INTEGER, DIMENSION(1:H5I_FLAGS_LEN) :: H5I_flags ! ! H5L flags declaration ! INTEGER, PARAMETER :: H5L_FLAGS_LEN = 6 INTEGER, DIMENSION(1:H5L_FLAGS_LEN) :: H5L_flags ! ! H5O flags declaration ! INTEGER, PARAMETER :: H5O_FLAGS_LEN = 33 INTEGER, DIMENSION(1:H5O_FLAGS_LEN) :: H5O_flags ! ! H5P flags declaration ! INTEGER, PARAMETER :: H5P_FLAGS_LEN = 18 INTEGER(HID_T), DIMENSION(1:H5P_FLAGS_LEN) :: H5P_flags ! ! H5P integers flags declaration ! INTEGER, PARAMETER :: H5P_FLAGS_INT_LEN = 2 INTEGER, DIMENSION(1:H5P_FLAGS_INT_LEN) :: H5P_flags_int ! ! H5R flags declaration ! INTEGER, PARAMETER :: H5R_FLAGS_LEN = 2 INTEGER, DIMENSION(1:H5R_FLAGS_LEN) :: H5R_flags ! ! H5S flags declaration ! INTEGER, PARAMETER :: H5S_FLAGS_LEN = 18 INTEGER, DIMENSION(1:H5S_FLAGS_LEN) :: H5S_flags INTEGER, PARAMETER :: H5S_HSIZE_FLAGS_LEN = 1 INTEGER(HSIZE_T), DIMENSION(1:H5S_HSIZE_FLAGS_LEN) :: H5S_hsize_flags INTEGER, PARAMETER :: H5S_HID_FLAGS_LEN = 1 INTEGER(HSIZE_T), DIMENSION(1:H5S_HID_FLAGS_LEN) :: H5S_hid_flags ! ! H5T flags declaration ! INTEGER, PARAMETER :: H5T_FLAGS_LEN = 35 INTEGER, DIMENSION(1:H5T_FLAGS_LEN) :: H5T_flags ! ! H5Z flags declaration ! INTEGER, PARAMETER :: H5Z_FLAGS_LEN = 20 INTEGER, DIMENSION(1:H5Z_FLAGS_LEN) :: H5Z_flags ! ! H5 Library flags declaration ! INTEGER, PARAMETER :: H5LIB_FLAGS_LEN = 2 INTEGER, DIMENSION(1:H5LIB_FLAGS_LEN) :: H5LIB_flags PUBLIC :: h5open_f, h5close_f, h5get_libversion_f, h5dont_atexit_f, h5kind_to_type, h5offsetof, h5gmtime PUBLIC :: h5garbage_collect_f, h5check_version_f CONTAINS !****s* H5LIB/h5open_f ! ! NAME ! h5open_f ! ! PURPOSE ! Initializes HDF5 Fortran interface. ! ! Outputs: ! error - Returns 0 if successful and -1 if fails ! ! AUTHOR ! Elena Pourmal ! August 12, 1999 ! ! HISTORY ! Explicit Fortran interfaces were added for ! called C functions (it is needed for Windows ! port). February 28, 2001 ! ! Removed call to h5open_c since this may cause a problem for an ! application that uses HDF5 library outside HDF5 Fortran APIs. ! October 13, 2011 ! Fortran90 Interface: SUBROUTINE h5open_f(error) USE H5F, ONLY : h5fget_obj_count_f, H5OPEN_NUM_OBJ IMPLICIT NONE INTEGER, INTENT(OUT) :: error INTEGER(SIZE_T) :: H5OPEN_NUM_OBJ_LOC = 0 !***** INTERFACE INTEGER FUNCTION h5init_types_c(p_types, f_types, i_types) & BIND(C,NAME='h5init_types_c') IMPORT :: HID_T IMPORT :: PREDEF_TYPES_LEN, FLOATING_TYPES_LEN, INTEGER_TYPES_LEN IMPLICIT NONE INTEGER(HID_T), DIMENSION(1:PREDEF_TYPES_LEN) :: p_types INTEGER(HID_T), DIMENSION(1:FLOATING_TYPES_LEN) :: f_types INTEGER(HID_T), DIMENSION(1:INTEGER_TYPES_LEN) :: i_types END FUNCTION h5init_types_c INTEGER FUNCTION h5init_flags_c(i_H5D_flags, & i_H5D_size_flags,& i_H5E_flags, & i_H5E_hid_flags, & i_H5F_flags, & i_H5FD_flags, & i_H5FD_hid_flags, & i_H5G_flags, & i_H5I_flags, & i_H5L_flags, & i_H5O_flags, & i_H5P_flags, & i_H5P_flags_int, & i_H5R_flags, & i_H5S_flags, & i_H5S_hid_flags, & i_H5S_hsize_flags, & i_H5T_flags, & i_H5Z_flags, & i_H5generic_flags, & i_H5generic_haddr_flags) & BIND(C,NAME='h5init_flags_c') IMPORT :: HID_T, SIZE_T, HSIZE_T, HADDR_T IMPORT :: H5D_FLAGS_LEN, H5D_SIZE_FLAGS_LEN, & H5E_FLAGS_LEN, H5E_HID_FLAGS_LEN, & H5F_FLAGS_LEN, H5G_FLAGS_LEN, H5FD_FLAGS_LEN, & H5FD_HID_FLAGS_LEN, H5I_FLAGS_LEN, H5L_FLAGS_LEN, & H5O_FLAGS_LEN, H5P_FLAGS_LEN, H5P_FLAGS_INT_LEN, & H5R_FLAGS_LEN, H5S_FLAGS_LEN, H5S_HID_FLAGS_LEN, H5S_HSIZE_FLAGS_LEN, & H5T_FLAGS_LEN, H5Z_FLAGS_LEN, H5generic_FLAGS_LEN, H5generic_haddr_FLAGS_LEN IMPLICIT NONE INTEGER , DIMENSION(1:H5D_FLAGS_LEN) :: i_H5D_flags INTEGER(SIZE_T) , DIMENSION(1:H5D_SIZE_FLAGS_LEN) :: i_H5D_size_flags INTEGER , DIMENSION(1:H5E_FLAGS_LEN) :: i_H5E_flags INTEGER(HID_T) , DIMENSION(1:H5E_HID_FLAGS_LEN) :: i_H5E_hid_flags INTEGER , DIMENSION(1:H5F_FLAGS_LEN) :: i_H5F_flags INTEGER , DIMENSION(1:H5G_FLAGS_LEN) :: i_H5G_flags INTEGER , DIMENSION(1:H5FD_FLAGS_LEN) :: i_H5FD_flags INTEGER(HID_T) , DIMENSION(1:H5FD_HID_FLAGS_LEN) :: i_H5FD_hid_flags INTEGER , DIMENSION(1:H5I_FLAGS_LEN) :: i_H5I_flags INTEGER , DIMENSION(1:H5L_FLAGS_LEN) :: i_H5L_flags INTEGER , DIMENSION(1:H5O_FLAGS_LEN) :: i_H5O_flags INTEGER(HID_T) , DIMENSION(1:H5P_FLAGS_LEN) :: i_H5P_flags INTEGER , DIMENSION(1:H5P_FLAGS_INT_LEN) :: i_H5P_flags_int INTEGER , DIMENSION(1:H5R_FLAGS_LEN) :: i_H5R_flags INTEGER , DIMENSION(1:H5S_FLAGS_LEN) :: i_H5S_flags INTEGER(HID_T) , DIMENSION(1:H5S_HID_FLAGS_LEN) :: i_H5S_hid_flags INTEGER(HSIZE_T), DIMENSION(1:H5S_HSIZE_FLAGS_LEN) :: i_H5S_hsize_flags INTEGER , DIMENSION(1:H5T_FLAGS_LEN) :: i_H5T_flags INTEGER , DIMENSION(1:H5Z_FLAGS_LEN) :: i_H5Z_flags INTEGER , DIMENSION(1:H5generic_FLAGS_LEN) :: i_H5generic_flags INTEGER(HADDR_T), DIMENSION(1:H5generic_haddr_FLAGS_LEN) :: i_H5generic_haddr_flags END FUNCTION h5init_flags_c INTEGER FUNCTION h5init1_flags_c( i_H5LIB_flags ) & BIND(C,NAME='h5init1_flags_c') IMPORT :: H5LIB_FLAGS_LEN IMPLICIT NONE INTEGER, DIMENSION(1:H5LIB_FLAGS_LEN) :: i_H5LIB_flags END FUNCTION h5init1_flags_c END INTERFACE error = h5init_types_c(predef_types, floating_types, integer_types) H5T_NATIVE_INTEGER_KIND(1:5) = predef_types(1:5) H5T_NATIVE_INTEGER = predef_types(6) H5T_NATIVE_REAL = predef_types(7) H5T_NATIVE_DOUBLE = predef_types(8) H5T_NATIVE_CHARACTER = predef_types(9) H5T_STD_REF_OBJ = predef_types(10) H5T_STD_REF_DSETREG = predef_types(11) H5T_NATIVE_REAL_C_FLOAT = predef_types(12) H5T_NATIVE_REAL_C_DOUBLE = predef_types(13) H5T_NATIVE_REAL_C_LONG_DOUBLE = predef_types(14) H5T_NATIVE_B8 = predef_types(15) H5T_NATIVE_B16 = predef_types(16) H5T_NATIVE_B32 = predef_types(17) H5T_NATIVE_B64 = predef_types(18) H5T_NATIVE_FLOAT_128 = predef_types(19) H5T_IEEE_F32BE = floating_types(1) H5T_IEEE_F32LE = floating_types(2) H5T_IEEE_F64BE = floating_types(3) H5T_IEEE_F64LE = floating_types(4) H5T_STD_I8BE = integer_types(1) H5T_STD_I8LE = integer_types(2) H5T_STD_I16BE = integer_types(3) H5T_STD_I16LE = integer_types(4) H5T_STD_I32BE = integer_types(5) H5T_STD_I32LE = integer_types(6) H5T_STD_I64BE = integer_types(7) H5T_STD_I64LE = integer_types(8) H5T_STD_U8BE = integer_types(9) H5T_STD_U8LE = integer_types(10) H5T_STD_U16BE = integer_types(11) H5T_STD_U16LE = integer_types(12) H5T_STD_U32BE = integer_types(13) H5T_STD_U32LE = integer_types(14) H5T_STD_U64BE = integer_types(15) H5T_STD_U64LE = integer_types(16) H5T_STRING = integer_types(17) H5T_STD_B8BE = integer_types(18) H5T_STD_B8LE = integer_types(19) H5T_STD_B16BE = integer_types(20) H5T_STD_B16LE = integer_types(21) H5T_STD_B32BE = integer_types(22) H5T_STD_B32LE = integer_types(23) H5T_STD_B64BE = integer_types(24) H5T_STD_B64LE = integer_types(25) H5T_FORTRAN_S1 = integer_types(26) H5T_C_S1 = integer_types(27) error = error + h5init_flags_c(H5D_flags, & H5D_size_flags, & H5E_flags, & H5E_hid_flags, & H5F_flags, & H5FD_flags, & H5FD_hid_flags, & H5G_flags, & H5I_flags, & H5L_flags, & H5O_flags, & H5P_flags, & H5P_flags_int, & H5R_flags, & H5S_flags, & H5S_hid_flags, & H5S_hsize_flags, & H5T_flags, & H5Z_flags, & H5generic_flags,& H5generic_haddr_flags) ! ! H5F flags ! H5F_ACC_RDWR_F = H5F_flags(1) H5F_ACC_RDONLY_F = H5F_flags(2) H5F_ACC_TRUNC_F = H5F_flags(3) H5F_ACC_EXCL_F = H5F_flags(4) H5F_ACC_DEBUG_F = H5F_flags(5) H5F_SCOPE_LOCAL_F = H5F_flags(6) H5F_SCOPE_GLOBAL_F = H5F_flags(7) H5F_CLOSE_DEFAULT_F = H5F_flags(8) H5F_CLOSE_WEAK_F = H5F_flags(9) H5F_CLOSE_SEMI_F = H5F_flags(10) H5F_CLOSE_STRONG_F = H5F_flags(11) H5F_OBJ_FILE_F = H5F_flags(12) H5F_OBJ_DATASET_F = H5F_flags(13) H5F_OBJ_GROUP_F = H5F_flags(14) H5F_OBJ_DATATYPE_F = H5F_flags(15) H5F_OBJ_ALL_F = H5F_flags(16) H5F_LIBVER_EARLIEST_F = H5F_flags(17) H5F_LIBVER_LATEST_F = H5F_flags(18) H5F_UNLIMITED_F = H5F_flags(19) ! ! H5generic flags ! H5_INDEX_UNKNOWN_F = H5generic_flags(1) H5_INDEX_NAME_F = H5generic_flags(2) H5_INDEX_CRT_ORDER_F = H5generic_flags(3) H5_INDEX_N_F = H5generic_flags(4) H5_ITER_UNKNOWN_F = H5generic_flags(5) H5_ITER_INC_F = H5generic_flags(6) H5_ITER_DEC_F = H5generic_flags(7) H5_ITER_NATIVE_F = H5generic_flags(8) H5_ITER_N_F = H5generic_flags(9) HADDR_UNDEF_F = H5generic_haddr_flags(1) ! ! H5G flags ! H5G_UNKNOWN_F = H5G_flags(1) H5G_GROUP_F = H5G_flags(2) H5G_DATASET_F = H5G_flags(3) H5G_TYPE_F = H5G_flags(4) H5G_SAME_LOC_F = H5G_flags(5) H5G_LINK_ERROR_F = H5G_flags(6) H5G_LINK_HARD_F = H5G_flags(7) H5G_LINK_SOFT_F = H5G_flags(8) H5G_STORAGE_TYPE_UNKNOWN_F = H5G_flags(9) H5G_STORAGE_TYPE_SYMBOL_TABLE_F = H5G_flags(10) H5G_STORAGE_TYPE_COMPACT_F = H5G_flags(11) H5G_STORAGE_TYPE_DENSE_F = H5G_flags(12) ! ! H5D flags ! H5D_COMPACT_F = H5D_flags(1) H5D_CONTIGUOUS_F = H5D_flags(2) H5D_CHUNKED_F = H5D_flags(3) H5D_ALLOC_TIME_ERROR_F = H5D_flags(4) H5D_ALLOC_TIME_DEFAULT_F = H5D_flags(5) H5D_ALLOC_TIME_EARLY_F = H5D_flags(6) H5D_ALLOC_TIME_LATE_F = H5D_flags(7) H5D_ALLOC_TIME_INCR_F = H5D_flags(8) H5D_SPACE_STS_ERROR_F = H5D_flags(9) H5D_SPACE_STS_NOT_ALLOCATED_F = H5D_flags(10) H5D_SPACE_STS_PART_ALLOCATED_F = H5D_flags(11) H5D_SPACE_STS_ALLOCATED_F = H5D_flags(12) H5D_FILL_TIME_ERROR_F = H5D_flags(13) H5D_FILL_TIME_ALLOC_F = H5D_flags(14) H5D_FILL_TIME_NEVER_F = H5D_flags(15) H5D_FILL_VALUE_ERROR_F = H5D_flags(16) H5D_FILL_VALUE_UNDEFINED_F = H5D_flags(17) H5D_FILL_VALUE_DEFAULT_F = H5D_flags(18) H5D_FILL_VALUE_USER_DEFINED_F = H5D_flags(19) H5D_CHUNK_CACHE_W0_DFLT_F = H5D_flags(20) H5D_MPIO_NO_COLLECTIVE_F = H5D_flags(21) H5D_MPIO_CHUNK_INDEPENDENT_F = H5D_flags(22) H5D_MPIO_CHUNK_COLLECTIVE_F = H5D_flags(23) H5D_MPIO_CHUNK_MIXED_F = H5D_flags(24) H5D_MPIO_CONTIG_COLLECTIVE_F = H5D_flags(25) H5D_VDS_ERROR_F = H5D_flags(26) H5D_VDS_FIRST_MISSING_F = H5D_flags(27) H5D_VDS_LAST_AVAILABLE_F = H5D_flags(28) H5D_VIRTUAL_F = H5D_flags(29) H5D_CHUNK_CACHE_NSLOTS_DFLT_F = H5D_size_flags(1) H5D_CHUNK_CACHE_NBYTES_DFLT_F = H5D_size_flags(2) ! ! H5E flags ! H5E_DEFAULT_F = H5E_hid_flags(1) H5E_MAJOR_F = H5E_flags(1) H5E_MINOR_F = H5E_flags(2) H5E_WALK_UPWARD_F = H5E_flags(3) H5E_WALK_DOWNWARD_F = H5E_flags(4) ! ! H5FD flags ! H5FD_MPIO_INDEPENDENT_F = H5FD_flags(1) H5FD_MPIO_COLLECTIVE_F = H5FD_flags(2) H5FD_MEM_NOLIST_F = H5FD_flags(3) H5FD_MEM_DEFAULT_F = H5FD_flags(4) H5FD_MEM_SUPER_F = H5FD_flags(5) H5FD_MEM_BTREE_F = H5FD_flags(6) H5FD_MEM_DRAW_F = H5FD_flags(7) H5FD_MEM_GHEAP_F = H5FD_flags(8) H5FD_MEM_LHEAP_F = H5FD_flags(9) H5FD_MEM_OHDR_F = H5FD_flags(10) H5FD_MEM_NTYPES_F = H5FD_flags(11) ! ! H5FD file driver flags ! H5FD_CORE_F = H5FD_hid_flags(1) H5FD_FAMILY_F = H5FD_hid_flags(2) H5FD_LOG_F = H5FD_hid_flags(3) H5FD_MPIO_F = H5FD_hid_flags(4) H5FD_MULTI_F = H5FD_hid_flags(5) H5FD_SEC2_F = H5FD_hid_flags(6) H5FD_STDIO_F = H5FD_hid_flags(7) ! ! H5I flags declaration ! H5I_FILE_F = H5I_flags(1) H5I_GROUP_F = H5I_flags(2) H5I_DATATYPE_F = H5I_flags(3) H5I_DATASPACE_F = H5I_flags(4) H5I_DATASET_F = H5I_flags(5) H5I_ATTR_F = H5I_flags(6) H5I_BADID_F = H5I_flags(7) ! ! H5L flags ! H5L_TYPE_ERROR_F = H5L_flags(1) H5L_TYPE_HARD_F = H5L_flags(2) H5L_TYPE_SOFT_F = H5L_flags(3) H5L_TYPE_EXTERNAL_F = H5L_flags(4) H5L_SAME_LOC_F = H5L_flags(5) H5L_LINK_CLASS_T_VERS_F = H5L_flags(6) ! ! H5O flags ! H5O_COPY_SHALLOW_HIERARCHY_F = h5o_flags(1) H5O_COPY_EXPAND_SOFT_LINK_F = h5o_flags(2) H5O_COPY_EXPAND_EXT_LINK_F = h5o_flags(3) H5O_COPY_EXPAND_REFERENCE_F = h5o_flags(4) H5O_COPY_WITHOUT_ATTR_FLAG_F = h5o_flags(5) H5O_COPY_PRESERVE_NULL_FLAG_F = h5o_flags(6) H5O_COPY_ALL_F = h5o_flags(7) H5O_SHMESG_NONE_FLAG_F = h5o_flags(8) H5O_SHMESG_SDSPACE_FLAG_F = h5o_flags(9) H5O_SHMESG_DTYPE_FLAG_F = h5o_flags(10) H5O_SHMESG_FILL_FLAG_F = h5o_flags(11) H5O_SHMESG_PLINE_FLAG_F = h5o_flags(12) H5O_SHMESG_ATTR_FLAG_F = h5o_flags(13) H5O_SHMESG_ALL_FLAG_F = h5o_flags(14) H5O_HDR_CHUNK0_SIZE_F = h5o_flags(15) H5O_HDR_ATTR_CRT_ORDER_TRACK_F = h5o_flags(16) H5O_HDR_ATTR_CRT_ORDER_INDEX_F = h5o_flags(17) H5O_HDR_ATTR_STORE_PHASE_CHA_F = h5o_flags(18) H5O_HDR_STORE_TIMES_F = h5o_flags(19) H5O_HDR_ALL_FLAGS_F = h5o_flags(20) H5O_SHMESG_MAX_NINDEXES_F = h5o_flags(21) H5O_SHMESG_MAX_LIST_SIZE_F = h5o_flags(22) H5O_TYPE_UNKNOWN_F = h5o_flags(23) H5O_TYPE_GROUP_F = h5o_flags(24) H5O_TYPE_DATASET_F = h5o_flags(25) H5O_TYPE_NAMED_DATATYPE_F = h5o_flags(26) H5O_TYPE_NTYPES_F = h5o_flags(27) H5O_INFO_ALL_F = h5o_flags(28) H5O_INFO_BASIC_F = h5o_flags(29) H5O_INFO_TIME_F = h5o_flags(30) H5O_INFO_NUM_ATTRS_F = h5o_flags(31) H5O_INFO_HDR_F = h5o_flags(32) H5O_INFO_META_SIZE_F = h5o_flags(33) ! ! H5P flags ! H5P_FILE_CREATE_F = H5P_flags(1) H5P_FILE_ACCESS_F = H5P_flags(2) H5P_DATASET_CREATE_F = H5P_flags(3) H5P_DATASET_XFER_F = H5P_flags(4) H5P_FILE_MOUNT_F = H5P_flags(5) H5P_DEFAULT_F = H5P_flags(6) H5P_ROOT_F = H5P_flags(7) H5P_OBJECT_CREATE_F = H5P_flags(8) H5P_DATASET_ACCESS_F = H5P_flags(9) H5P_GROUP_CREATE_F = H5P_flags(10) H5P_GROUP_ACCESS_F = H5P_flags(11) H5P_DATATYPE_CREATE_F = H5P_flags(12) H5P_DATATYPE_ACCESS_F = H5P_flags(13) H5P_STRING_CREATE_F = H5P_flags(14) H5P_ATTRIBUTE_CREATE_F = H5P_flags(15) H5P_OBJECT_COPY_F = H5P_flags(16) H5P_LINK_CREATE_F = H5P_flags(17) H5P_LINK_ACCESS_F = H5P_flags(18) ! ! H5P integers flags ! H5P_CRT_ORDER_INDEXED_F = H5P_flags_int(1) H5P_CRT_ORDER_TRACKED_F = H5P_flags_int(2) ! ! H5R flags ! H5R_OBJECT_F = H5R_flags(1) H5R_DATASET_REGION_F = H5R_flags(2) ! ! H5S flags ! H5S_ALL_F = H5S_hid_flags(1) H5S_UNLIMITED_F = H5S_hsize_flags(1) H5S_SCALAR_F = H5S_flags(1) H5S_SIMPLE_F = H5S_flags(2) H5S_NULL_F = H5S_flags(3) H5S_SELECT_SET_F = H5S_flags(4) H5S_SELECT_OR_F = H5S_flags(5) H5S_SELECT_NOOP_F = H5S_flags(6) H5S_SELECT_AND_F = H5S_flags(7) H5S_SELECT_XOR_F = H5S_flags(8) H5S_SELECT_NOTB_F = H5S_flags(9) H5S_SELECT_NOTA_F = H5S_flags(10) H5S_SELECT_APPEND_F = H5S_flags(11) H5S_SELECT_PREPEND_F = H5S_flags(12) H5S_SELECT_INVALID_F = H5S_flags(13) H5S_SEL_ERROR_F = H5S_flags(14) H5S_SEL_NONE_F = H5S_flags(15) H5S_SEL_POINTS_F = H5S_flags(16) H5S_SEL_HYPERSLABS_F = H5S_flags(17) H5S_SEL_ALL_F = H5S_flags(18) ! ! H5T flags declaration ! H5T_NO_CLASS_F = H5T_flags(1) H5T_INTEGER_F = H5T_flags(2) H5T_FLOAT_F = H5T_flags(3) H5T_TIME_F = H5T_flags(4) H5T_STRING_F = H5T_flags(5) H5T_BITFIELD_F = H5T_flags(6) H5T_OPAQUE_F = H5T_flags(7) H5T_COMPOUND_F = H5T_flags(8) H5T_REFERENCE_F = H5T_flags(9) H5T_ENUM_F = H5T_flags(10) H5T_ORDER_LE_F = H5T_flags(11) H5T_ORDER_BE_F = H5T_flags(12) H5T_ORDER_MIXED_F = H5T_flags(13) H5T_ORDER_VAX_F = H5T_flags(14) H5T_ORDER_NONE_F = H5T_flags(15) H5T_PAD_ZERO_F = H5T_flags(16) H5T_PAD_ONE_F = H5T_flags(17) H5T_PAD_BACKGROUND_F = H5T_flags(18) H5T_PAD_ERROR_F = H5T_flags(19) H5T_SGN_NONE_F = H5T_flags(20) H5T_SGN_2_F = H5T_flags(21) H5T_SGN_ERROR_F = H5T_flags(22) H5T_NORM_IMPLIED_F = H5T_flags(23) H5T_NORM_MSBSET_F = H5T_flags(24) H5T_NORM_NONE_F = H5T_flags(25) H5T_CSET_ASCII_F = H5T_flags(26) H5T_CSET_UTF8_F = H5T_flags(27) H5T_STR_NULLTERM_F = H5T_flags(28) H5T_STR_NULLPAD_F = H5T_flags(29) H5T_STR_SPACEPAD_F = H5T_flags(30) H5T_STR_ERROR_F = H5T_flags(31) H5T_VLEN_F = H5T_flags(32) H5T_ARRAY_F = H5T_flags(33) H5T_DIR_ASCEND_F = H5T_flags(34) H5T_DIR_DESCEND_F = H5T_flags(35) ! ! H5Z flags ! H5Z_FILTER_ERROR_F = H5Z_flags(1) H5Z_FILTER_NONE_F = H5Z_flags(2) H5Z_FILTER_DEFLATE_F = H5Z_flags(3) H5Z_FILTER_SHUFFLE_F = H5Z_flags(4) H5Z_FILTER_FLETCHER32_F = H5Z_flags(5) H5Z_ERROR_EDC_F = H5Z_flags(6) H5Z_DISABLE_EDC_F = H5Z_flags(7) H5Z_ENABLE_EDC_F = H5Z_flags(8) H5Z_NO_EDC_F = H5Z_flags(9) H5Z_FILTER_SZIP_F = H5Z_flags(10) H5Z_FLAG_OPTIONAL_F = H5Z_flags(11) H5Z_FILTER_ENCODE_ENABLED_F = H5Z_flags(12) H5Z_FILTER_DECODE_ENABLED_F = H5Z_flags(13) H5Z_FILTER_ALL_F = H5Z_flags(14) H5Z_FILTER_NBIT_F = H5Z_flags(15) H5Z_FILTER_SCALEOFFSET_F = H5Z_flags(16) H5Z_SO_FLOAT_DSCALE_F = H5Z_flags(17) H5Z_SO_FLOAT_ESCALE_F = H5Z_flags(18) H5Z_SO_INT_F = H5Z_flags(19) H5Z_SO_INT_MINBITS_DEFAULT_F = H5Z_flags(20) error = error + h5init1_flags_c(H5LIB_flags) ! ! H5 Library flags ! H5_SZIP_EC_OM_F = H5LIB_flags(1) H5_SZIP_NN_OM_F = H5LIB_flags(2) CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), H5F_OBJ_ALL_F, H5OPEN_NUM_OBJ_LOC, error) H5OPEN_NUM_OBJ = H5OPEN_NUM_OBJ_LOC END SUBROUTINE h5open_f !****s* H5LIB/h5close_f ! ! NAME ! h5close_f ! ! PURPOSE ! Closes HDF5 Fortran interface. ! ! Outputs: ! error - Returns 0 if successful and -1 if fails ! ! AUTHOR ! Elena Pourmal ! August 12, 1999 ! ! HISTORY ! Explicit Fortran interfaces were added for ! called C functions (it is needed for Windows ! port). February 28, 2001 ! ! Removed call to h5close_c since this may cause a problem for an ! application that uses HDF5 library outside HDF5 Fortran APIs. ! October 13, 2011 ! Fortran90 Interface: SUBROUTINE h5close_f(error) IMPLICIT NONE INTEGER, INTENT(OUT) :: error !***** INTERFACE INTEGER FUNCTION h5close_types_c(p_types, P_TYPES_LEN, & f_types, F_TYPES_LEN, & i_types, I_TYPES_LEN ) & BIND(C,NAME='h5close_types_c') IMPORT :: HID_T INTEGER :: P_TYPES_LEN INTEGER :: F_TYPES_LEN INTEGER :: I_TYPES_LEN INTEGER(HID_T), DIMENSION(1:P_TYPES_LEN) :: p_types INTEGER(HID_T), DIMENSION(1:F_TYPES_LEN) :: f_types INTEGER(HID_T), DIMENSION(1:I_TYPES_LEN) :: i_types END FUNCTION h5close_types_c END INTERFACE error = h5close_types_c(predef_types, PREDEF_TYPES_LEN, & floating_types, FLOATING_TYPES_LEN, & integer_types, INTEGER_TYPES_LEN ) END SUBROUTINE h5close_f !****s* H5LIB/h5get_libversion_f ! ! NAME ! h5get_libversion_f ! ! PURPOSE ! Returns the HDF5 LIbrary release number ! ! Outputs: ! majnum - major version of the library ! minum - minor version of the library ! relnum - release version of the library ! error - Returns 0 if successful and -1 if fails ! ! AUTHOR ! Elena Pourmal ! September 24, 2002 ! ! Fortran90 Interface: SUBROUTINE h5get_libversion_f(majnum, minnum, relnum, error) IMPLICIT NONE INTEGER, INTENT(OUT) :: majnum, minnum, relnum, error !***** INTERFACE INTEGER FUNCTION h5get_libversion_c(majnum, minnum, relnum) & BIND(C,NAME='h5get_libversion_c') IMPLICIT NONE INTEGER, INTENT(OUT) :: majnum, minnum, relnum END FUNCTION h5get_libversion_c END INTERFACE error = h5get_libversion_c(majnum, minnum, relnum) END SUBROUTINE h5get_libversion_f !****s* H5LIB/h5check_version_f ! ! NAME ! h5check_version_f ! ! PURPOSE ! Verifies that library versions are consistent. ! ! Inputs: ! majnum - major version of the library ! minum - minor version of the library ! relnum - release version of the library ! ! Outputs: ! error - Returns 0 if successful and -1 if fails ! ! AUTHOR ! Elena Pourmal ! September 24, 2002 ! ! Fortran90 Interface: SUBROUTINE h5check_version_f(majnum, minnum, relnum, error) IMPLICIT NONE INTEGER, INTENT(IN) :: majnum, minnum, relnum INTEGER, INTENT(OUT) :: error !***** INTERFACE INTEGER FUNCTION h5check_version_c(majnum, minnum, relnum) & BIND(C,NAME='h5check_version_c') IMPLICIT NONE INTEGER, INTENT(IN) :: majnum, minnum, relnum END FUNCTION h5check_version_c END INTERFACE error = h5check_version_c(majnum, minnum, relnum) END SUBROUTINE h5check_version_f !****s* H5LIB/h5garbage_collect_f ! ! NAME ! h5garbage_collect_f ! ! PURPOSE ! Garbage collects on all free-lists of all types. ! ! Outputs: ! error - Returns 0 if successful and -1 if fails ! ! AUTHOR ! Elena Pourmal ! September 24, 2002 ! ! Fortran90 Interface: SUBROUTINE h5garbage_collect_f(error) IMPLICIT NONE INTEGER, INTENT(OUT) :: error !***** INTERFACE INTEGER FUNCTION h5garbage_collect_c() & BIND(C,NAME='h5garbage_collect_c') END FUNCTION h5garbage_collect_c END INTERFACE error = h5garbage_collect_c() END SUBROUTINE h5garbage_collect_f !****s* H5LIB/h5dont_atexit_f ! ! NAME ! h5dont_atexit_f ! ! PURPOSE ! Instructs library not to install atexit cleanup routine. ! ! Outputs: ! error - Returns 0 if successful and -1 if fails ! ! AUTHOR ! Elena Pourmal ! September 24, 2002 ! ! Fortran90 Interface: SUBROUTINE h5dont_atexit_f(error) IMPLICIT NONE INTEGER, INTENT(OUT) :: error !***** INTERFACE INTEGER FUNCTION h5dont_atexit_c() & BIND(C,NAME='h5dont_atexit_c') END FUNCTION h5dont_atexit_c END INTERFACE error = h5dont_atexit_c() END SUBROUTINE h5dont_atexit_f !****f* H5LIB/h5kind_to_type ! ! NAME ! h5kind_to_type ! ! PURPOSE ! Converts the KIND to the correct HDF type ! ! Inputs: ! kind - Fortran KIND parameter ! flag - Whether KIND is of type INTEGER or REAL: ! H5_INTEGER_KIND - integer ! H5_REAL_KIND - real ! Outputs: ! h5_type - Returns the type ! ! AUTHOR ! M. Scot Breitenfeld ! August 25, 2008 ! ! Fortran90 Interface: INTEGER(HID_T) FUNCTION h5kind_to_type(ikind, flag) RESULT(h5_type) USE ISO_C_BINDING IMPLICIT NONE INTEGER, INTENT(IN) :: ikind INTEGER, INTENT(IN) :: flag INTEGER :: i !***** !#if H5_HAVE_Fortran_INTEGER_SIZEOF_16!=0 ! ! (1) The array index assumes INTEGER*16 the last integer in the series, and ! ! (2) it should map to INTEGER*16 on most modern processors ! H5T_NATIVE_INTEGER_KIND(H5_FORTRAN_NUM_INTEGER_KINDS)=SELECTED_INT_KIND(36) !#endif h5_type = -1 IF(flag.EQ.H5_INTEGER_KIND)THEN do_kind: DO i = 1, H5_FORTRAN_NUM_INTEGER_KINDS IF(ikind.EQ.Fortran_INTEGER_AVAIL_KINDS(i))THEN h5_type = H5T_NATIVE_INTEGER_KIND(i) EXIT do_kind ENDIF END DO do_kind ELSE IF(flag.EQ.H5_REAL_KIND)THEN IF(ikind.EQ.KIND(1.0_C_FLOAT))THEN h5_type = H5T_NATIVE_REAL_C_FLOAT ELSE IF(ikind.EQ.KIND(1.0_C_DOUBLE))THEN h5_type = H5T_NATIVE_REAL_C_DOUBLE #if H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE!=0 ELSE IF(ikind.EQ.KIND(1.0_C_LONG_DOUBLE))THEN h5_type = H5T_NATIVE_REAL_C_LONG_DOUBLE #endif #if H5_PAC_FC_MAX_REAL_PRECISION > 28 #if H5_HAVE_FLOAT128 == 1 ELSE h5_type = H5T_NATIVE_FLOAT_128 #endif #endif ENDIF ENDIF END FUNCTION h5kind_to_type !****f* H5LIB_PROVISIONAL/h5offsetof ! ! NAME ! h5offsetof ! ! PURPOSE ! Computes the offset in memory ! ! Inputs: ! start - starting pointer address ! end - ending pointer address ! ! Outputs: ! offset - offset of a member within the derived type ! ! AUTHOR ! M. Scot Breitenfeld ! Augest 25, 2008 ! ! ACKNOWLEDGEMENTS ! Joe Krahn ! ! Fortran2003 Interface: FUNCTION h5offsetof(start,end) RESULT(offset) IMPLICIT NONE INTEGER(SIZE_T) :: offset TYPE(C_PTR), VALUE, INTENT(IN) :: start, end !***** INTEGER(C_INTPTR_T) :: int_address_start, int_address_end int_address_start = TRANSFER(start, int_address_start) int_address_end = TRANSFER(end , int_address_end ) offset = int_address_end - int_address_start END FUNCTION h5offsetof !****f* H5LIB_PROVISIONAL/h5gmtime ! ! NAME ! h5gmtime ! ! PURPOSE ! Convert time_t structure (C) to Fortran DATE AND TIME storage format. ! ! Inputs: ! stdtime_t - Object of type time_t that contains a time value ! ! Outputs: ! datetime - A date/time array using Fortran conventions: ! datetime(1) = year ! datetime(2) = month ! datetime(3) = day ! datetime(4) = 0 ! time is expressed as UTC (or GMT timezone) */ ! datetime(5) = hour ! datetime(6) = minute ! datetime(7) = second ! datetime(8) = millisecond -- not available, assigned - HUGE(0) ! ! AUTHOR ! M. Scot Breitenfeld ! January, 2019 ! ! Fortran Interface: FUNCTION h5gmtime(stdtime_t) IMPLICIT NONE INTEGER(KIND=TIME_T), INTENT(IN) :: stdtime_t INTEGER, DIMENSION(1:8) :: h5gmtime !***** TYPE(C_PTR) :: cptr INTEGER(C_INT), DIMENSION(:), POINTER :: c_time INTERFACE FUNCTION gmtime(stdtime_t) BIND(C, NAME='gmtime') IMPORT :: TIME_T, C_PTR IMPLICIT NONE INTEGER(KIND=TIME_T) :: stdtime_t TYPE(C_PTR) :: gmtime END FUNCTION gmtime END INTERFACE cptr = gmtime(stdtime_t) CALL C_F_POINTER(cptr, c_time, [9]) h5gmtime(1) = INT(c_time(6)+1900) ! year starts at 1900 h5gmtime(2) = INT(c_time(5)+1) ! month starts at 0 in C h5gmtime(3) = INT(c_time(4)) ! day h5gmtime(4) = 0 ! time is expressed as UTC (or GMT timezone) h5gmtime(5) = INT(c_time(3)) ! hour h5gmtime(6) = INT(c_time(2)) ! minute h5gmtime(7) = INT(c_time(1)) ! second h5gmtime(8) = -32767 ! millisecond is not available, assign it -HUGE(0) END FUNCTION h5gmtime END MODULE H5LIB