! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * ! Copyright by the Board of Trustees of the University of Illinois. * ! All rights reserved. * ! * ! This file is part of HDF5. The full HDF5 copyright notice, including * ! terms governing use, modification, and redistribution, is contained in * ! the files COPYING and Copyright.html. COPYING can be found at the root * ! of the source code distribution tree; Copyright.html can be found at the * ! root level of an installed copy of the electronic HDF5 document set and * ! is linked from the top-level documents page. It can also be found at * ! http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have * ! access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. * ! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * ! ! ! ! Testing Dataset Interface functionality. ! ! ! The following subroutine tests the following functionalities: ! h5dcreate_f, h5dopen_f, h5dclose_f, h5dget_space_f, h5dget_type_f, ! h5dread_f, and h5dwrite_f ! SUBROUTINE datasettest(cleanup, total_error) USE HDF5 ! This module contains all necessary modules IMPLICIT NONE LOGICAL, INTENT(IN) :: cleanup INTEGER, INTENT(OUT) :: total_error CHARACTER(LEN=5), PARAMETER :: filename = "dsetf" ! File name CHARACTER(LEN=80) :: fix_filename CHARACTER(LEN=4), PARAMETER :: dsetname = "dset" ! Dataset name INTEGER(HID_T) :: file_id ! File identifier INTEGER(HID_T) :: dset_id ! Dataset identifier INTEGER(HID_T) :: dspace_id ! Dataspace identifier INTEGER(HID_T) :: dtype_id ! Datatype identifier INTEGER(HSIZE_T), DIMENSION(2) :: dims = (/4,6/) ! Dataset dimensions INTEGER :: rank = 2 ! Dataset rank INTEGER, DIMENSION(4,6) :: dset_data, data_out ! Data buffers INTEGER :: error ! Error flag INTEGER :: i, j !general purpose integers INTEGER(HSIZE_T), DIMENSION(2) :: data_dims ! ! Initialize the dset_data array. ! do i = 1, 4 do j = 1, 6 dset_data(i,j) = (i-1)*6 + j; end do end do ! ! Create a new file using default properties. ! CALL h5_fixname_f(filename, fix_filename, H5P_DEFAULT_F, error) if (error .ne. 0) then write(*,*) "Cannot modify filename" stop endif CALL h5fcreate_f(fix_filename, H5F_ACC_TRUNC_F, file_id, error) CALL check("h5fcreate_f", error, total_error) ! ! Create the dataspace. ! CALL h5screate_simple_f(rank, dims, dspace_id, error) CALL check("h5screate_simple_f", error, total_error) ! ! Create the dataset with default properties. ! CALL h5dcreate_f(file_id, dsetname, H5T_NATIVE_INTEGER, dspace_id, & dset_id, error) CALL check("h5dcreate_f", error, total_error) ! ! Write the dataset. ! data_dims(1) = 4 data_dims(2) = 6 CALL h5dwrite_f(dset_id, H5T_NATIVE_INTEGER, dset_data, data_dims, error) CALL check("h5dwrite_f", error, total_error) ! ! End access to the dataset and release resources used by it. ! CALL h5dclose_f(dset_id, error) CALL check("h5dclose_f", error, total_error) ! ! Terminate access to the data space. ! CALL h5sclose_f(dspace_id, error) CALL check("h5sclose_f", error, total_error) ! ! Close the file. ! CALL h5fclose_f(file_id, error) CALL check("h5fclose_f", error, total_error) ! ! Open the existing file. ! CALL h5fopen_f (fix_filename, H5F_ACC_RDWR_F, file_id, error) CALL check("h5fopen_f", error, total_error) ! ! Open the existing dataset. ! CALL h5dopen_f(file_id, dsetname, dset_id, error) CALL check("h5dopen_f", error, total_error) ! ! Get the dataset type. ! CALL h5dget_type_f(dset_id, dtype_id, error) CALL check("h5dget_type_f", error, total_error) ! ! Get the data space. ! CALL h5dget_space_f(dset_id, dspace_id, error) CALL check("h5dget_space_f", error, total_error) ! ! Read the dataset. ! CALL h5dread_f(dset_id, H5T_NATIVE_INTEGER, data_out, data_dims, error) CALL check("h5dread_f", error, total_error) ! !Compare the data. ! do i = 1, 4 do j = 1, 6 IF (data_out(i,j) .NE. dset_data(i, j)) THEN write(*, *) "dataset test error occured" write(*,*) "data read is not the same as the data writen" END IF end do end do ! ! End access to the dataset and release resources used by it. ! CALL h5dclose_f(dset_id, error) CALL check("h5dclose_f", error, total_error) ! ! Terminate access to the data space. ! CALL h5sclose_f(dspace_id, error) CALL check("h5sclose_f", error, total_error) ! ! Terminate access to the data type. ! CALL h5tclose_f(dtype_id, error) CALL check("h5tclose_f", error, total_error) ! ! Close the file. ! CALL h5fclose_f(file_id, error) CALL check("h5fclose_f", error, total_error) if(cleanup) CALL h5_cleanup_f(filename, H5P_DEFAULT_F, error) CALL check("h5_cleanup_f", error, total_error) RETURN END SUBROUTINE datasettest ! !the following subroutine tests h5dextend_f functionality ! SUBROUTINE extenddsettest(cleanup, total_error) USE HDF5 ! This module contains all necessary modules IMPLICIT NONE LOGICAL, INTENT(IN) :: cleanup INTEGER, INTENT(OUT) :: total_error ! !the dataset is stored in file "extf.h5" ! CHARACTER(LEN=4), PARAMETER :: filename = "extf" CHARACTER(LEN=80) :: fix_filename ! !dataset name is "ExtendibleArray" ! CHARACTER(LEN=15), PARAMETER :: dsetname = "ExtendibleArray" ! !dataset rank is 2 ! INTEGER :: RANK = 2 INTEGER(HID_T) :: file_id ! File identifier INTEGER(HID_T) :: dset_id ! Dataset identifier INTEGER(HID_T) :: dataspace ! Dataspace identifier INTEGER(HID_T) :: memspace ! memory Dataspace identifier INTEGER(HID_T) :: crp_list ! dataset creatation property identifier ! !dataset dimensions at creation time ! INTEGER(HSIZE_T), DIMENSION(2) :: dims = (/3,3/) ! !data dimensions ! INTEGER(HSIZE_T), DIMENSION(2) :: dims1 = (/10,3/) ! !Maximum dimensions ! INTEGER(HSIZE_T), DIMENSION(2) :: maxdims ! !data arrays for reading and writing ! INTEGER, DIMENSION(10,3) :: data_in, data_out ! !Size of data in the file ! INTEGER(HSIZE_T), DIMENSION(2) :: size ! !general purpose integer ! INTEGER :: i, j ! !flag to check operation success ! INTEGER :: error ! !Variables used in reading data back ! INTEGER(HSIZE_T), DIMENSION(2) :: dimsr, maxdimsr INTEGER :: rankr INTEGER(HSIZE_T), DIMENSION(2) :: data_dims ! !data initialization ! do i = 1, 10 do j = 1, 3 data_in(i,j) = 2 end do end do ! !Initialize FORTRAN predifined datatypes ! ! CALL h5init_types_f(error) ! CALL check("h5init_types_f",error,total_error) ! !Create a new file using default properties. ! CALL h5_fixname_f(filename, fix_filename, H5P_DEFAULT_F, error) if (error .ne. 0) then write(*,*) "Cannot modify filename" stop endif CALL h5fcreate_f(fix_filename, H5F_ACC_TRUNC_F, file_id, error) CALL check("h5fcreate_f",error,total_error) ! !Create the data space with unlimited dimensions. ! maxdims = (/H5S_UNLIMITED_F, H5S_UNLIMITED_F/) CALL h5screate_simple_f(RANK, dims, dataspace, error, maxdims) CALL check("h5screate_simple_f",error,total_error) ! !Modify dataset creation properties, i.e. enable chunking ! CALL h5pcreate_f(H5P_DATASET_CREATE_F, crp_list, error) CALL check("h5pcreat_f",error,total_error) CALL h5pset_chunk_f(crp_list, RANK, dims1, error) CALL check("h5pset_chunk_f",error,total_error) ! !Create a dataset with 3X3 dimensions using cparms creation propertie . ! CALL h5dcreate_f(file_id, dsetname, H5T_NATIVE_INTEGER, dataspace, & dset_id, error, crp_list ) CALL check("h5dcreate_f",error,total_error) ! !Extend the dataset. This call assures that dataset is 3 x 3. ! size(1) = 3 size(2) = 3 CALL h5dextend_f(dset_id, size, error) CALL check("h5dextend_f",error,total_error) ! !Extend the dataset. Dataset becomes 10 x 3. ! size(1) = 10; size(2) = 3; CALL h5dextend_f(dset_id, size, error) CALL check("h5dextend_f",error,total_error) ! !Write the data of size 10X3 to the extended dataset. ! data_dims(1) = 10 data_dims(2) = 3 CALL H5dwrite_f(dset_id, H5T_NATIVE_INTEGER, data_in, data_dims, error) CALL check("h5dwrite_f",error,total_error) ! !Close the dataspace for the dataset. ! CALL h5sclose_f(dataspace, error) CALL check("h5sclose_f",error,total_error) ! !Close the property list. ! CALL h5pclose_f(crp_list, error) CALL check("h5pclose_f",error,total_error) ! !Close the dataset. ! CALL h5dclose_f(dset_id, error) CALL check("h5dclose_f",error,total_error) ! !Close the file. ! CALL h5fclose_f(file_id, error) CALL check("h5fclose_f",error,total_error) ! !read the data back ! !Open the file. ! CALL h5fopen_f (fix_filename, H5F_ACC_RDONLY_F, file_id, error) CALL check("hfopen_f",error,total_error) ! !Open the dataset. ! CALL h5dopen_f(file_id, dsetname, dset_id, error) CALL check("h5dopen_f",error,total_error) ! !Get dataset's dataspace handle. ! CALL h5dget_space_f(dset_id, dataspace, error) CALL check("h5dget_space_f",error,total_error) ! !Get dataspace's rank. ! CALL h5sget_simple_extent_ndims_f(dataspace, rankr, error) CALL check("h5sget_simple_extent_ndims_f",error,total_error) IF (rankr .NE. RANK) then write(*,*) "dataset rank error occured" stop END IF ! !Get dataspace's dimensinons. ! CALL h5sget_simple_extent_dims_f(dataspace, dimsr, maxdimsr, error) CALL check("h5sget_simple_extent_dims_f",error,total_error) IF ((dimsr(1) .NE. dims1(1)) .OR. (dimsr(2) .NE. dims1(2))) THEN write(*,*) "dataset dimensions error occured" stop END IF ! !Get creation property list. ! CALL h5dget_create_plist_f(dset_id, crp_list, error) CALL check("h5dget_create_plist_f",error,total_error) ! !create memory dataspace. ! CALL h5screate_simple_f(rankr, dimsr, memspace, error) CALL check("h5screate_simple_f",error,total_error) ! !Read data ! CALL H5dread_f(dset_id, H5T_NATIVE_INTEGER, data_out, data_dims, error, & memspace, dataspace) CALL check("h5dread_f",error,total_error) ! !Compare the data. ! do i = 1, dims1(1) do j = 1, dims1(2) IF (data_out(i,j) .NE. data_in(i, j)) THEN write(*, *) "extend dataset test error occured" write(*, *) "read value is not the same as the written values" END IF end do end do ! !Close the dataspace for the dataset. ! CALL h5sclose_f(dataspace, error) CALL check("h5sclose_f",error,total_error) ! !Close the memspace for the dataset. ! CALL h5sclose_f(memspace, error) CALL check("h5sclose_f",error,total_error) ! !Close the property list. ! CALL h5pclose_f(crp_list, error) CALL check("h5pclose_f",error,total_error) ! !Close the dataset. ! CALL h5dclose_f(dset_id, error) CALL check("h5dclose_f",error,total_error) ! !Close the file. ! CALL h5fclose_f(file_id, error) CALL check("h5fclose_f",error,total_error) if(cleanup) CALL h5_cleanup_f(filename, H5P_DEFAULT_F, error) CALL check("h5_cleanup_f", error, total_error) RETURN END SUBROUTINE extenddsettest