/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include #include #include "h5hltest.h" #include "H5srcdir.h" #include "H5DOpublic.h" #include #include #define FILE_NAME5 "test_dectris.h5" #define DATASETNAME "Array" #define RANK 2 #define NX 16 #define NY 16 #define CHUNK_NX 4 #define CHUNK_NY 4 #define DEFLATE_SIZE_ADJUST(s) (ceil(((double)(s))*1.001)+12) static int test_direct_chunk_write (void) { char filename[1024]; hid_t file; /* handles */ hid_t fapl; hid_t dataspace, dataset; hid_t mem_space; hid_t cparms, dxpl; hsize_t dims[2] = {NX, NY}; hsize_t maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED}; hsize_t chunk_dims[2] ={CHUNK_NX, CHUNK_NY}; herr_t status; int ret; int data[NX][NY]; int check[NX][NY]; int i, j, n; unsigned filter_mask = 0; int direct_buf[CHUNK_NX][CHUNK_NY]; int check_chunk[CHUNK_NX][CHUNK_NY]; hsize_t offset[2] = {0, 0}; size_t buf_size = CHUNK_NX*CHUNK_NY*sizeof(int); const Bytef *z_src = (const Bytef*)(direct_buf); Bytef *z_dst; /*destination buffer */ uLongf z_dst_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(buf_size); uLong z_src_nbytes = (uLong)buf_size; int aggression = 9; /* Compression aggression setting */ void *outbuf = NULL; /* Pointer to new buffer */ hsize_t start[2]; /* Start of hyperslab */ hsize_t stride[2]; /* Stride of hyperslab */ hsize_t count[2]; /* Block count */ hsize_t block[2]; /* Block sizes */ TESTING("H5DOwrite_chunk"); /* * Create the data space with unlimited dimensions. */ if((dataspace = H5Screate_simple(RANK, dims, maxdims)) < 0) goto error; if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0) goto error; /* * Create a new file. If file exists its contents will be overwritten. */ if((file = H5Fcreate(FILE_NAME5, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error; /* * Modify dataset creation properties, i.e. enable chunking and compression */ if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) goto error; if((status = H5Pset_chunk( cparms, RANK, chunk_dims)) < 0) goto error; if((status = H5Pset_deflate( cparms, aggression)) < 0) goto error; /* * Create a new dataset within the file using cparms * creation properties. */ if((dataset = H5Dcreate2(file, DATASETNAME, H5T_NATIVE_INT, dataspace, H5P_DEFAULT, cparms, H5P_DEFAULT)) < 0) goto error; /* Initialize the dataset */ for(i = n = 0; i < NX; i++) for(j = 0; j < NY; j++) data[i][j] = n++; if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0) goto error; /* * Write the data for the dataset. It should stay in the chunk cache. * It will be evicted from the cache by the H5DOwrite_chunk calls. */ if((status = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, dxpl, data)) < 0) goto error; /* Initialize data for one chunk */ for(i = n = 0; i < CHUNK_NX; i++) for(j = 0; j < CHUNK_NY; j++) direct_buf[i][j] = n++; /* Allocate output (compressed) buffer */ outbuf = malloc(z_dst_nbytes); z_dst = (Bytef *)outbuf; /* Perform compression from the source to the destination buffer */ ret = compress2(z_dst, &z_dst_nbytes, z_src, z_src_nbytes, aggression); /* Check for various zlib errors */ if(Z_BUF_ERROR == ret) { fprintf(stderr, "overflow"); goto error; } else if(Z_MEM_ERROR == ret) { fprintf(stderr, "deflate memory error"); goto error; } else if(Z_OK != ret) { fprintf(stderr, "other deflate error"); goto error; } /* Write the compressed chunk data repeatedly to cover all the chunks in the * dataset, using the direct writing function. */ for(i=0; i