/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include "h5hltest.h"
#include "H5srcdir.h"
#include "H5TBpublic.h"
#define TEST_FILE_BE "test_table_be.h5"
#define TEST_FILE_LE "test_table_le.h5"
#define TEST_FILE_CRAY "test_table_cray.h5"
/*-------------------------------------------------------------------------
* Table API test
*
* Functions tested:
*
* H5TBmake_table
* H5TBread_table
* H5TBwrite_records
* H5TBread_records
* H5TBappend_records
* H5TBinsert_record
* H5TBdelete_record
* H5TBcombine_tables
* H5TBwrite_fields_name
* H5TBread_fields_name
* H5TBwrite_fields_index
* H5TBinsert_field
* H5TBdelete_field
* H5TBget_table_info
* H5TBget_field_info
*
*-------------------------------------------------------------------------
*/
#define TITLE "Title"
#define NFIELDS 5
#define NRECORDS 8
#define NRECORDS_ADD 3
/*-------------------------------------------------------------------------
* structure used for all tests, a particle with properties
*-------------------------------------------------------------------------
*/
typedef struct particle_t {
char name[16];
long longi;
float pressure;
double temperature;
int lati;
} particle_t;
/*-------------------------------------------------------------------------
* a subset of particle_t, with latitude and longitude fields
*-------------------------------------------------------------------------
*/
typedef struct position_t {
long longi;
int lati;
} position_t;
/*-------------------------------------------------------------------------
* a subset of particle_t, with name and pressure fields
*-------------------------------------------------------------------------
*/
typedef struct namepressure_t {
char name[16];
float pressure;
} namepressure_t;
/*-------------------------------------------------------------------------
* an extended particle, used in the insert field test
*-------------------------------------------------------------------------
*/
typedef struct particle2_t {
char name[16];
long longi;
float pressure;
double temperature;
int lati;
int new_field;
} particle2_t;
/*-------------------------------------------------------------------------
* a particle with one field less, used in the delete field test
*-------------------------------------------------------------------------
*/
typedef struct particle3_t {
char name[16];
long longi;
double temperature;
int lati;
} particle3_t;
/*-------------------------------------------------------------------------
* a particle, used in the delete field test differing memory layout
*-------------------------------------------------------------------------
*/
/* Push current alignment rule forcing 4-byte alignment boundary
* to the internal stack ...
*/
#pragma pack(push, 4)
typedef struct particle4_t {
uint32_t state;
double posx;
double posy;
float atx[3];
float aty[3];
float rro[2];
} particle4_t;
/*
* ... and restore original alignment rules from stack
*/
#pragma pack(pop)
/*-------------------------------------------------------------------------
* function to open an HDF5 file and return its file identifier
*-------------------------------------------------------------------------
*/
static hid_t
h5file_open(const char *fname, unsigned flags)
{
hid_t fid; /* identifier for the file */
const char *data_file = H5_get_srcdir_filename(fname);
/* open */
if ((fid = H5Fopen(data_file, flags, H5P_DEFAULT)) < 0) {
HDfprintf(stderr, "Error: Cannot open file <%s>\n", data_file);
HDexit(1);
}
return fid;
}
/*-------------------------------------------------------------------------
* function that compares one particle
*-------------------------------------------------------------------------
*/
static int
cmp_par(hsize_t i, hsize_t j, particle_t *rbuf, particle_t *wbuf)
{
if ((HDstrcmp(rbuf[i].name, wbuf[j].name) != 0) || rbuf[i].lati != wbuf[j].lati ||
rbuf[i].longi != wbuf[j].longi || !H5_FLT_ABS_EQUAL(rbuf[i].pressure, wbuf[j].pressure) ||
!H5_DBL_ABS_EQUAL(rbuf[i].temperature, wbuf[j].temperature)) {
HDfprintf(stderr, "read and write buffers have differences\n");
HDfprintf(stderr, "%s %ld %f %f %d\n", rbuf[i].name, rbuf[i].longi, (double)rbuf[i].pressure,
rbuf[i].temperature, rbuf[i].lati);
HDfprintf(stderr, "%s %ld %f %f %d\n", wbuf[j].name, wbuf[j].longi, (double)wbuf[j].pressure,
wbuf[j].temperature, wbuf[j].lati);
return -1;
}
return 0;
}
/*-------------------------------------------------------------------------
* function to compare deleted records
*-------------------------------------------------------------------------
*/
static int
compare_deleted(hsize_t rrecords, hsize_t dstart, hsize_t drecords, particle_t *rbuf, particle_t *wbuf)
{
hsize_t i, j;
for (i = 0; i < rrecords; i++) {
if (i < dstart) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
return -1;
}
else {
j = i + drecords;
if (cmp_par(i, j, rbuf, wbuf) < 0)
return -1;
}
}
return 0;
}
/*-------------------------------------------------------------------------
* the test program
*-------------------------------------------------------------------------
*/
static int
test_table(hid_t fid, int do_write)
{
hid_t fid1;
hid_t fid2;
hsize_t chunk_size = 10;
int compress = 0;
int *fill = NULL;
particle_t fill1[1] = {{"no data", -1, -99.0, -99.0, -1}};
int fill1_new[1] = {-100};
hsize_t position;
char tname[20];
hsize_t i, j;
/* write, read, append, delete, insert some records and fields */
hsize_t FIELDS = NFIELDS;
hsize_t RECORDS = NRECORDS;
hsize_t start;
hsize_t wstart;
hsize_t rstart;
hsize_t istart;
hsize_t dstart;
hsize_t nrecords;
hsize_t rrecords;
hsize_t wrecords;
hsize_t arecords;
hsize_t irecords;
hsize_t drecords;
hsize_t nfields;
hsize_t rfields;
hsize_t start1; /* record to start reading from 1st table */
hsize_t start2; /* record to start writing in 2nd table */
/* read, write, insert, append buffers */
particle_t rbuf[NRECORDS + 4];
particle2_t rbuf2[NRECORDS];
particle3_t rbuf3[NRECORDS];
particle_t rbufc[NRECORDS * 2];
particle_t abuf[2] = {{"eight", 80, 8.0, 80.0, 80}, {"nine", 90, 9.0, 90.0, 90}};
particle_t ibuf[2] = {{"zero", 0, 0.0, 0.0, 0}, {"zero", 0, 0.0, 0.0, 0}};
particle_t wbufd[NRECORDS];
particle_t wbuf[NRECORDS] = {{
"zero",
0,
0.0,
0.0,
0,
},
{"one", 10, 1.0, 10.0, 10},
{"two", 20, 2.0, 20.0, 20},
{"three", 30, 3.0, 30.0, 30},
{"four", 40, 4.0, 40.0, 40},
{"five", 50, 5.0, 50.0, 50},
{"six", 60, 6.0, 60.0, 60},
{"seven", 70, 7.0, 70.0, 70}};
/* buffers for the field "Pressure" and "New_field" */
float pressure_in[NRECORDS] = {0.0F, 1.0F, 2.0F, 3.0F, 4.0F, 5.0F, 6.0F, 7.0F};
float pressure_out[NRECORDS];
int buf_new[NRECORDS] = {0, 1, 2, 3, 4, 5, 6, 7};
/* buffers for the fields "Latitude,Longitude" */
position_t position_out[NRECORDS_ADD];
position_t position_in[NRECORDS_ADD] = {{0, 0}, {10, 10}, {20, 20}};
/* buffers for the fields "Name,Pressure" */
namepressure_t namepre_out[NRECORDS];
namepressure_t namepre_in[NRECORDS] = {
{"zero", 0.0F}, {"one", 1.0F}, {"two", 2.0F}, {"three", 3.0F},
{"four", 4.0F}, {"five", 5.0F}, {"six", 6.0F}, {"seven", 7.0F},
};
/*-------------------------------------------------------------------------
* initialize table parameters
* field offsets and sizes used in the fields functions
*-------------------------------------------------------------------------
*/
size_t field_offset_pos[2] = {HOFFSET(position_t, longi), HOFFSET(position_t, lati)};
size_t field_offset_namepre[2] = {HOFFSET(namepressure_t, name), HOFFSET(namepressure_t, pressure)};
size_t field_sizes_pos[2] = {sizeof(position_in[0].longi), sizeof(position_in[0].lati)};
size_t field_sizes_namepre[2] = {sizeof(namepre_in[0].name), sizeof(namepre_in[0].pressure)};
size_t field_sizes_pre[1] = {sizeof(namepre_in[0].pressure)};
/*-------------------------------------------------------------------------
* query table test
*-------------------------------------------------------------------------
*/
char **names_out;
size_t sizes_out[NFIELDS];
size_t offset_out[NFIELDS];
size_t size_out;
/*-------------------------------------------------------------------------
* initialize table parameters
* field indexes (zero based) used in the fields functions
* "Name 0","Longitude 1","Pressure 2","Temperature 3","Latitude 4"
*-------------------------------------------------------------------------
*/
int field_index_pre[1] = {2};
int field_index_pos[2] = {1, 4};
int field_index_namepre[2] = {0, 2};
int field_index[NFIELDS] = {0, 1, 2, 3, 4};
/*-------------------------------------------------------------------------
* initialize table parameters
* size and the offsets of struct members in memory
* define the inserted field HDF5 type and buffers
* these are used for the insert field test
*-------------------------------------------------------------------------
*/
hid_t field_type_new = H5T_NATIVE_INT;
size_t dst_size2 = sizeof(particle2_t);
size_t dst_offset2[NFIELDS + 1] = {HOFFSET(particle2_t, name), HOFFSET(particle2_t, longi),
HOFFSET(particle2_t, pressure), HOFFSET(particle2_t, temperature),
HOFFSET(particle2_t, lati), HOFFSET(particle2_t, new_field)};
size_t dst_sizes2[NFIELDS + 1] = {sizeof(rbuf2[0].name), sizeof(rbuf2[0].longi),
sizeof(rbuf2[0].pressure), sizeof(rbuf2[0].temperature),
sizeof(rbuf2[0].lati), sizeof(rbuf2[0].new_field)};
/*-------------------------------------------------------------------------
* initialize table parameters
* size and the offsets of struct members in memory
* these are used for the delete field test
*-------------------------------------------------------------------------
*/
size_t dst_size3 = sizeof(particle3_t);
size_t dst_offset3[NFIELDS - 1] = {HOFFSET(particle3_t, name), HOFFSET(particle3_t, longi),
HOFFSET(particle3_t, temperature), HOFFSET(particle3_t, lati)};
size_t dst_sizes3[NFIELDS - 1] = {sizeof(rbuf3[0].name), sizeof(rbuf3[0].longi),
sizeof(rbuf3[0].temperature), sizeof(rbuf3[0].lati)};
/*-------------------------------------------------------------------------
* initialize table parameters
* size and the offsets of struct members in memory
* these are used for the delete field test with differing memory layout
*-------------------------------------------------------------------------
*/
/* Calculate the size and the offsets of our struct members in memory */
size_t tbl_size = sizeof(particle4_t);
size_t tbl_offset[NFIELDS + 1] = {HOFFSET(particle4_t, state), HOFFSET(particle4_t, posx),
HOFFSET(particle4_t, posy), HOFFSET(particle4_t, atx),
HOFFSET(particle4_t, aty), HOFFSET(particle4_t, rro)};
/* Define an array of Particles */
particle4_t p_data[NRECORDS] = {{12112, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12113, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12114, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12115, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12116, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12117, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12118, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}},
{12119, 1.4, 2.5, {1, 2, 3}, {4, 5, 6}, {99, 100}}};
/*-------------------------------------------------------------------------
* initialize table parameters
* 1) size and the offsets of struct members in memory
* 2) field names
* 3) define a HDF5 type for the fields
*-------------------------------------------------------------------------
*/
size_t type_size_mem = sizeof(particle_t);
size_t field_offset[NFIELDS] = {HOFFSET(particle_t, name), HOFFSET(particle_t, longi),
HOFFSET(particle_t, pressure), HOFFSET(particle_t, temperature),
HOFFSET(particle_t, lati)};
size_t field_size[NFIELDS] = {sizeof(rbuf[0].name), sizeof(rbuf[0].longi), sizeof(rbuf[0].pressure),
sizeof(rbuf[0].temperature), sizeof(rbuf[0].lati)};
const char *field_names4[NFIELDS + 1] = {"F1", "F2", "F3", "F4", "F5", "F6"};
hid_t field_type4[NFIELDS + 1];
particle4_t fill_data[1] = {{9999999, -9999999, 999999, {999, 999, 999}, {999, 999, 999}, {999, 999}}};
hsize_t nfields_out;
hsize_t nrecords_out;
hid_t arry3_32f;
hid_t arry2_32f;
hsize_t dims;
const char *field_names[NFIELDS] = {"Name", "Longitude", "Pressure", "Temperature", "Latitude"};
hid_t field_type[NFIELDS];
hid_t string_type = H5Tcopy(H5T_C_S1);
H5Tset_size(string_type, 16);
field_type[0] = string_type;
field_type[1] = H5T_NATIVE_LONG;
field_type[2] = H5T_NATIVE_FLOAT;
field_type[3] = H5T_NATIVE_DOUBLE;
field_type[4] = H5T_NATIVE_INT;
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBmake_table
* H5TBread_table
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("making table");
if (H5TBmake_table(TITLE, fid, "table1", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
PASSED();
}
HL_TESTING2("reading table");
/*-------------------------------------------------------------------------
* read the table
*-------------------------------------------------------------------------
*/
if (H5TBread_table(fid, "table1", type_size_mem, field_offset, field_size, rbuf) < 0)
goto out;
/* compare the extracted table with the original array */
for (i = 0; i < NRECORDS; i++) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
goto out;
}
PASSED();
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBwrite_records
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("writing records");
/* create an empty table */
if (H5TBmake_table(TITLE, fid, "table2", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, 0) < 0)
goto out;
/*-------------------------------------------------------------------------
* write records, start at 0, write 8
* pos = 0 1 2 3 4 5 6 7
* data= 0 1 2 3 4 5 6 7
*-------------------------------------------------------------------------
*/
wstart = 0;
wrecords = 8;
if (H5TBwrite_records(fid, "table2", wstart, wrecords, type_size_mem, field_offset, field_size,
wbuf) < 0)
goto out;
/* read it back */
if (H5TBread_table(fid, "table2", type_size_mem, field_offset, field_size, rbuf) < 0)
goto out;
/* compare */
for (i = 0; i < NRECORDS; i++) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
goto out;
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBread_records
*
*-------------------------------------------------------------------------
*/
HL_TESTING2("reading records");
/*-------------------------------------------------------------------------
* read records, start at 0, read 8
* pos = 0 1 2 3 4 5 6 7
* data= 0 1 2 3 4 5 6 7
*-------------------------------------------------------------------------
*/
/*-------------------------------------------------------------------------
* for the read test we cannot use "table2" because it has been appended
* we use the original "table1" instead
*-------------------------------------------------------------------------
*/
if (do_write)
HDstrcpy(tname, "table2");
else
HDstrcpy(tname, "table1");
rstart = 0;
rrecords = 8;
if (H5TBread_records(fid, tname, rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) < 0)
goto out;
/* compare */
for (i = rstart; i < rrecords; i++) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
goto out;
}
PASSED();
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBappend_records
* H5TBread_records
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("appending records");
/*-------------------------------------------------------------------------
* append 2 records
* pos = 0 1 2 3 4 5 6 7 8 9
* data= 0 1 2 3 4 5 6 7 8 9
*-------------------------------------------------------------------------
*/
arecords = 2;
if (H5TBappend_records(fid, "table2", arecords, type_size_mem, field_offset, field_size, abuf) < 0)
return 1;
if (H5TBget_table_info(fid, "table2", &rfields, &rrecords) < 0)
return 1;
rstart = 0;
rrecords = NRECORDS + arecords;
if (H5TBread_records(fid, "table2", rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) <
0)
return 1;
/* compare */
wrecords = 8;
for (i = rstart; i < wrecords; i++) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
goto out;
}
for (i = wrecords, j = 0; i < rrecords; i++, j++) {
if (cmp_par(i, j, rbuf, abuf) < 0)
goto out;
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBinsert_record
* H5TBread_records
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("inserting records");
/*-------------------------------------------------------------------------
* insert 2 records
* pos = 0 1 2 3 4 5 6 7 8 9 10 11
* data= 0 0 0 1 2 3 4 5 6 7 8 9
*-------------------------------------------------------------------------
*/
istart = 1;
irecords = 2;
if (H5TBinsert_record(fid, "table2", istart, irecords, type_size_mem, field_offset, field_size,
ibuf) < 0)
return 1;
if (H5TBget_table_info(fid, "table2", &rfields, &rrecords) < 0)
return 1;
if (H5TBread_records(fid, "table2", rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) <
0)
return 1;
/* compare */
for (i = 0; i < 12; i++) {
if (i < istart) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
goto out;
}
else if (i >= istart && i < istart + irecords) {
j = i - istart;
if (cmp_par(i, j, rbuf, ibuf) < 0)
goto out;
}
else if (i >= istart + irecords && i < 10) {
j = i - irecords;
if (cmp_par(i, j, rbuf, wbuf) < 0)
goto out;
}
else {
j = i - 10;
if (cmp_par(i, j, rbuf, abuf) < 0)
goto out;
}
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBdelete_record
* H5TBread_records
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("deleting records");
/*-------------------------------------------------------------------------
* Create a table
* pos = 0 1 2 3 4 5 6 7
* data= 0 1 2 3 4 5 6 7
*-------------------------------------------------------------------------
*/
for (i = 0; i < NRECORDS; i++) {
wbufd[i].lati = wbuf[i].lati;
wbufd[i].longi = wbuf[i].longi;
wbufd[i].pressure = wbuf[i].pressure;
wbufd[i].temperature = wbuf[i].temperature;
HDstrcpy(wbufd[i].name, wbuf[i].name);
}
if (H5TBmake_table(TITLE, fid, "table3", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbufd) < 0)
goto out;
/*-------------------------------------------------------------------------
* Delete records, start at 2, delete 3
* pos = 0 1 2 3 4
* data= 0 1 5 6 7
*-------------------------------------------------------------------------
*/
dstart = 2;
drecords = 3;
if (H5TBdelete_record(fid, "table3", dstart, drecords) < 0)
goto out;
if (H5TBget_table_info(fid, "table3", &rfields, &rrecords) < 0)
goto out;
rstart = 0;
if (H5TBread_records(fid, "table3", rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) <
0)
goto out;
/* compare */
nrecords = NRECORDS;
assert(rrecords == nrecords - drecords);
if (compare_deleted(rrecords, dstart, drecords, rbuf, wbufd) < 0)
goto out;
/*-------------------------------------------------------------------------
* reset compare buffer
*-------------------------------------------------------------------------
*/
nrecords = rrecords;
for (i = 0; i < nrecords; i++) {
wbufd[i] = rbuf[i];
}
/*-------------------------------------------------------------------------
* Delete records, start at 0, delete 2
* pos = 0 1 2
* data= 5 6 7
*-------------------------------------------------------------------------
*/
dstart = 0;
drecords = 2;
if (H5TBdelete_record(fid, "table3", dstart, drecords) < 0)
goto out;
if (H5TBget_table_info(fid, "table3", &rfields, &rrecords) < 0)
goto out;
rstart = 0;
if (H5TBread_records(fid, "table3", rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) <
0)
goto out;
/* Compare */
assert(rrecords == nrecords - drecords);
if (compare_deleted(rrecords, dstart, drecords, rbuf, wbufd) < 0)
goto out;
/*-------------------------------------------------------------------------
* reset compare buffer
*-------------------------------------------------------------------------
*/
nrecords = rrecords;
for (i = 0; i < nrecords; i++) {
wbufd[i] = rbuf[i];
}
/*-------------------------------------------------------------------------
* Delete records, start at 1, delete 1
* pos = 0 1
* data= 5 7
*-------------------------------------------------------------------------
*/
dstart = 1;
drecords = 1;
if (H5TBdelete_record(fid, "table3", dstart, drecords) < 0)
goto out;
if (H5TBget_table_info(fid, "table3", &rfields, &rrecords) < 0)
goto out;
rstart = 0;
if (H5TBread_records(fid, "table3", rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) <
0)
goto out;
/* Compare */
assert(rrecords == nrecords - drecords);
if (compare_deleted(rrecords, dstart, drecords, rbuf, wbufd) < 0)
goto out;
/*-------------------------------------------------------------------------
* reset compare buffer
*-------------------------------------------------------------------------
*/
nrecords = rrecords;
for (i = 0; i < nrecords; i++) {
wbufd[i] = rbuf[i];
}
/*-------------------------------------------------------------------------
* Delete records, start at 0, delete 1
* pos = 0
* data= 7
*-------------------------------------------------------------------------
*/
dstart = 0;
drecords = 1;
if (H5TBdelete_record(fid, "table3", dstart, drecords) < 0)
goto out;
if (H5TBget_table_info(fid, "table3", &rfields, &rrecords) < 0)
goto out;
rstart = 0;
if (H5TBread_records(fid, "table3", rstart, rrecords, type_size_mem, field_offset, field_size, rbuf) <
0)
goto out;
/* Compare */
assert(rrecords == nrecords - drecords);
if (compare_deleted(rrecords, dstart, drecords, rbuf, wbufd) < 0)
goto out;
/*-------------------------------------------------------------------------
* reset compare buffer
*-------------------------------------------------------------------------
*/
nrecords = rrecords;
for (i = 0; i < nrecords; i++) {
wbufd[i] = rbuf[i];
}
/* Read complete table */
if (H5TBread_table(fid, "table3", type_size_mem, field_offset, field_size, rbuf) < 0)
goto out;
/* Compare */
for (i = 0; i < rrecords; i++) {
if (cmp_par(i, i, rbuf, wbufd) < 0) {
goto out;
}
}
/*-------------------------------------------------------------------------
* Delete records, start at 0, delete 1
* pos = 0
* data= empty
*-------------------------------------------------------------------------
*/
dstart = 0;
drecords = 1;
if (H5TBdelete_record(fid, "table3", dstart, drecords) < 0)
goto out;
if (H5TBget_table_info(fid, "table3", &rfields, &rrecords) < 0)
goto out;
if (rrecords)
goto out;
PASSED();
}
/*------------------------------------------------------------------------
* Functions tested:
*
* H5TBdelete_record -- With differing memory layout from machine memory
* layout. HDFFV-8055
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("deleting records (differing memory layout)");
dims = 3;
arry3_32f = H5Tarray_create2(H5T_NATIVE_FLOAT, 1, &dims);
dims = 2;
arry2_32f = H5Tarray_create2(H5T_NATIVE_FLOAT, 1, &dims);
/* Initialize the field field_type */
field_type4[0] = H5T_NATIVE_UINT32;
field_type4[1] = H5T_NATIVE_DOUBLE;
field_type4[2] = H5T_NATIVE_DOUBLE;
field_type4[3] = arry3_32f;
field_type4[4] = arry3_32f;
field_type4[5] = arry2_32f;
/* Make the table */
if (H5TBmake_table("Table Title", fid, "table", NFIELDS + 1, (hsize_t)NRECORDS, tbl_size,
field_names4, tbl_offset, field_type4, chunk_size, fill_data, compress,
p_data) < 0)
goto out;
/* Delete records */
start = 3;
nrecords = 3;
if (H5TBdelete_record(fid, "table", start, nrecords) < 0)
goto out;
;
/* Get table info */
if (H5TBget_table_info(fid, "table", &nfields_out, &nrecords_out) < 0)
goto out;
/* check */
if ((int)nfields_out != (int)NFIELDS + 1)
goto out;
if ((int)nrecords_out != (int)NRECORDS - 3)
goto out;
/* close type */
H5Tclose(arry3_32f);
H5Tclose(arry2_32f);
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBadd_records_from
* H5TBread_records
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("adding records");
/* create 2 tables */
if (H5TBmake_table(TITLE, fid, "table4", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
if (H5TBmake_table(TITLE, fid, "table5", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
/* add the records from "table4" to "table5" */
start1 = 3;
nrecords = 2;
start2 = 6;
if (H5TBadd_records_from(fid, "table4", start1, nrecords, "table5", start2) < 0)
goto out;
/* read final table */
if (H5TBread_table(fid, "table5", type_size_mem, field_offset, field_size, rbuf) < 0)
goto out;
/* compare */
for (i = 0; i < NRECORDS + 2; i++) {
if (i < start2) {
if (cmp_par(i, i, rbuf, wbuf) < 0)
goto out;
}
else if (i < start2 + nrecords) {
j = i - start1;
if (cmp_par(i, j, rbuf, wbuf) < 0)
goto out;
}
else {
j = i - nrecords;
if (cmp_par(i, j, rbuf, wbuf) < 0)
goto out;
}
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBcombine_tables
* H5TBread_table
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("combining tables");
/* create 2 tables */
if (H5TBmake_table(TITLE, fid, "table6", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
if (H5TBmake_table(TITLE, fid, "table7", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
/* combine the two tables into a third */
if (H5TBcombine_tables(fid, "table6", fid, "table7", "table8") < 0)
goto out;
/* read merged table */
if (H5TBread_table(fid, "table8", type_size_mem, field_offset, field_size, rbufc) < 0)
goto out;
/* compare */
for (i = 0; i < NRECORDS * 2; i++) {
if (i < NRECORDS) {
if (cmp_par(i, i, rbufc, wbuf) < 0)
goto out;
}
else {
if (cmp_par(i, i - NRECORDS, rbufc, wbuf) < 0)
goto out;
}
}
/*-------------------------------------------------------------------------
* multi file test
*-------------------------------------------------------------------------
*/
/* create 2 files using default properties. */
fid1 = H5Fcreate("combine_tables1.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
fid2 = H5Fcreate("combine_tables2.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
/* create 2 tables, one in each file */
if (H5TBmake_table(TITLE, fid1, "table1", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
if (H5TBmake_table(TITLE, fid2, "table2", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
/* combine the two tables into a third */
if (H5TBcombine_tables(fid1, "table1", fid2, "table2", "table3") < 0)
goto out;
/* read merged table */
if (H5TBread_table(fid1, "table3", type_size_mem, field_offset, field_size, rbufc) < 0)
goto out;
/* compare */
for (i = 0; i < NRECORDS * 2; i++) {
if (i < NRECORDS) {
if (cmp_par(i, i, rbufc, wbuf) < 0)
goto out;
}
else {
if (cmp_par(i, i - NRECORDS, rbufc, wbuf) < 0)
goto out;
}
}
/* close files */
H5Fclose(fid1);
H5Fclose(fid2);
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBwrite_fields_name
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("writing fields by name");
/* make an empty table with fill values */
if (H5TBmake_table(TITLE, fid, "table9", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill1, compress, 0) < 0)
goto out;
/* write the pressure field starting at record 2 */
start = 2;
nrecords = NRECORDS_ADD;
if (H5TBwrite_fields_name(fid, "table9", "Pressure", start, nrecords, sizeof(float), 0,
field_sizes_pre, pressure_in) < 0)
goto out;
/* write the new longitude and latitude information starting at record 2 */
start = 2;
nrecords = 3;
if (H5TBwrite_fields_name(fid, "table9", "Latitude,Longitude", start, nrecords, sizeof(position_t),
field_offset_pos, field_sizes_pos, position_in) < 0)
goto out;
/* read back the all table */
start = 0;
nrecords = NRECORDS;
if (H5TBread_table(fid, "table9", type_size_mem, field_offset, field_size, rbuf) < 0)
goto out;
{
/* compare the read values with the initial values */
for (i = 0; i < NRECORDS; i++) {
if (i >= 2 && i <= 4) {
if (rbuf[i].lati != position_in[i - NRECORDS_ADD + 1].lati ||
rbuf[i].longi != position_in[i - NRECORDS_ADD + 1].longi ||
!H5_FLT_ABS_EQUAL(rbuf[i].pressure, pressure_in[i - NRECORDS_ADD + 1])) {
HDfprintf(stderr, "%ld %f %d\n", rbuf[i].longi, (double)rbuf[i].pressure,
rbuf[i].lati);
HDfprintf(stderr, "%ld %f %d\n", position_in[i].longi, (double)pressure_in[i],
position_in[i].lati);
goto out;
}
}
}
}
PASSED();
} /*write*/
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBread_fields_name
*
*-------------------------------------------------------------------------
*/
HL_TESTING2("reading fields by name");
/*-------------------------------------------------------------------------
* write and read the "Pressure" field
*-------------------------------------------------------------------------
*/
if (do_write) {
if (H5TBmake_table(TITLE, fid, "table10", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill1, compress, 0) < 0)
goto out;
/* write the pressure field to all the records */
start = 0;
nrecords = NRECORDS;
if (H5TBwrite_fields_name(fid, "table10", "Pressure", start, nrecords, sizeof(float), 0,
field_sizes_pre, pressure_in) < 0)
goto out;
}
start = 0;
nrecords = NRECORDS;
/* read an invalid field, should fail */
if (H5TBread_fields_name(fid, "table10", "DoesNotExist", start, nrecords, sizeof(float), 0,
field_sizes_pre, pressure_out) >= 0)
goto out;
/* read the "Pressure" field */
if (H5TBread_fields_name(fid, "table10", "Pressure", start, nrecords, sizeof(float), 0, field_sizes_pre,
pressure_out) < 0)
goto out;
/* Compare the extracted table with the initial values */
for (i = 0; i < NRECORDS; i++) {
if (!H5_FLT_ABS_EQUAL(pressure_out[i], pressure_in[i])) {
goto out;
}
}
/*-------------------------------------------------------------------------
* Write and read the "Latitude,Longitude" fields
*-------------------------------------------------------------------------
*/
if (do_write) {
/* Write the new longitude and latitude information to all the records */
start = 0;
nrecords = NRECORDS_ADD;
if (H5TBwrite_fields_name(fid, "table10", "Latitude,Longitude", start, nrecords, sizeof(position_t),
field_offset_pos, field_sizes_pos, position_in) < 0)
goto out;
} /*write*/
/* Read the "Latitude,Longitude" fields */
start = 0;
nrecords = NRECORDS_ADD;
if (H5TBread_fields_name(fid, "table10", "Latitude,Longitude", start, nrecords, sizeof(position_t),
field_offset_pos, field_sizes_pos, position_out) < 0)
goto out;
/* Compare the extracted table with the initial values */
for (i = 0; i < NRECORDS_ADD; i++) {
if (position_out[i].lati != position_in[i].lati || position_out[i].longi != position_in[i].longi)
goto out;
}
/*-------------------------------------------------------------------------
* Write and read the "Name,Pressure" fields
*-------------------------------------------------------------------------
*/
if (do_write) {
/* Write the new name and pressure information to all the records */
start = 0;
nrecords = NRECORDS;
if (H5TBwrite_fields_name(fid, "table10", "Name,Pressure", start, nrecords, sizeof(namepressure_t),
field_offset_namepre, field_sizes_namepre, namepre_in) < 0)
goto out;
} /*write*/
/* Read the "Name,Pressure" fields */
start = 0;
nrecords = NRECORDS;
if (H5TBread_fields_name(fid, "table10", "Name,Pressure", start, nrecords, sizeof(namepressure_t),
field_offset_namepre, field_sizes_namepre, namepre_out) < 0)
goto out;
/* Compare the extracted table with the initial values */
for (i = 0; i < NRECORDS; i++) {
if ((HDstrcmp(namepre_out[i].name, namepre_in[i].name) != 0) ||
!H5_FLT_ABS_EQUAL(namepre_out[i].pressure, namepre_in[i].pressure)) {
goto out;
}
}
/* reset buffer */
for (i = 0; i < NRECORDS; i++) {
HDstrcpy(namepre_out[i].name, "\0");
namepre_out[i].pressure = -1;
}
/*-------------------------------------------------------------------------
* read only 3 records of the "Name,Pressure" fields, starting at record 2
*-------------------------------------------------------------------------
*/
start = 2;
nrecords = 3;
if (H5TBread_fields_name(fid, "table10", "Name,Pressure", start, nrecords, sizeof(namepressure_t),
field_offset_namepre, field_sizes_namepre, namepre_out) < 0)
goto out;
/* Compare the extracted table with the initial values */
for (i = 0; i < 3; i++) {
hsize_t iistart = start;
if ((HDstrcmp(namepre_out[i].name, namepre_in[iistart + i].name) != 0) ||
!H5_FLT_ABS_EQUAL(namepre_out[i].pressure, namepre_in[iistart + i].pressure)) {
goto out;
}
}
PASSED();
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBwrite_fields_index
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("writing fields by index");
/* make an empty table */
if (H5TBmake_table(TITLE, fid, "table11", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, NULL) < 0)
goto out;
/* write the pressure field starting at record 2 */
nfields = 1;
start = 2;
nrecords = NRECORDS_ADD;
if (H5TBwrite_fields_index(fid, "table11", nfields, field_index_pre, start, nrecords, sizeof(float),
0, field_sizes_pre, pressure_in) < 0)
goto out;
/* write the new longitude and latitude information starting at record 2 */
nfields = 2;
start = 2;
nrecords = NRECORDS_ADD;
if (H5TBwrite_fields_index(fid, "table11", nfields, field_index_pos, start, nrecords,
sizeof(position_t), field_offset_pos, field_sizes_pos, position_in) < 0)
goto out;
/* read back the all table */
nfields = 5;
start = 0;
nrecords = NRECORDS;
if (H5TBread_fields_index(fid, "table11", nfields, field_index, start, nrecords, type_size_mem,
field_offset, field_size, rbuf) < 0)
goto out;
/* Compare the extracted table with the initial values */
for (i = 0; i < NRECORDS; i++) {
if (i >= 2 && i <= 4) {
if (rbuf[i].lati != position_in[i - NRECORDS_ADD + 1].lati ||
rbuf[i].longi != position_in[i - NRECORDS_ADD + 1].longi ||
!H5_FLT_ABS_EQUAL(rbuf[i].pressure, pressure_in[i - NRECORDS_ADD + 1]))
goto out;
}
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBread_fields_index
*
*-------------------------------------------------------------------------
*/
HL_TESTING2("reading fields by index");
if (do_write) {
/* make an empty table */
if (H5TBmake_table(TITLE, fid, "table12", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, NULL) < 0)
goto out;
/*-------------------------------------------------------------------------
* write and read the "Pressure" field
*-------------------------------------------------------------------------
*/
/* write the pressure field to all the records */
nfields = 1;
start = 0;
nrecords = NRECORDS;
if (H5TBwrite_fields_index(fid, "table12", nfields, field_index_pre, start, nrecords, sizeof(float),
0, field_sizes_pre, pressure_in) < 0)
goto out;
}
/* read the "Pressure" field */
nfields = 1;
start = 0;
nrecords = NRECORDS;
if (H5TBread_fields_index(fid, "table12", nfields, field_index_pre, start, nrecords, sizeof(float), 0,
field_sizes_pre, pressure_out) < 0)
goto out;
/* compare the extracted table with the initial values */
for (i = 0; i < NRECORDS; i++) {
if (!H5_FLT_ABS_EQUAL(pressure_out[i], pressure_in[i])) {
goto out;
}
}
/*-------------------------------------------------------------------------
* write and read the "Latitude,Longitude" fields
*-------------------------------------------------------------------------
*/
if (do_write) {
/* write the new longitude and latitude information to all the records */
nfields = 2;
start = 0;
nrecords = NRECORDS_ADD;
if (H5TBwrite_fields_index(fid, "table12", nfields, field_index_pos, start, nrecords,
sizeof(position_t), field_offset_pos, field_sizes_pos, position_in) < 0)
goto out;
} /*write*/
/* read the "Latitude,Longitude" fields */
nfields = 2;
start = 0;
nrecords = NRECORDS_ADD;
if (H5TBread_fields_index(fid, "table12", nfields, field_index_pos, start, nrecords, sizeof(position_t),
field_offset_pos, field_sizes_pos, position_out) < 0)
goto out;
/* compare the extracted table with the initial values */
for (i = 0; i < NRECORDS_ADD; i++) {
if (position_out[i].lati != position_in[i].lati || position_out[i].longi != position_in[i].longi) {
goto out;
}
}
/*-------------------------------------------------------------------------
* write and read the "Name,Pressure" fields
*-------------------------------------------------------------------------
*/
if (do_write) {
/* write the new name and pressure information to all the records */
nfields = 2;
start = 0;
nrecords = NRECORDS;
if (H5TBwrite_fields_index(fid, "table12", nfields, field_index_namepre, start, nrecords,
sizeof(namepressure_t), field_offset_namepre, field_sizes_namepre,
namepre_in) < 0)
goto out;
}
/* read the "Name,Pressure" fields */
nfields = 2;
start = 0;
nrecords = NRECORDS;
if (H5TBread_fields_index(fid, "table12", nfields, field_index_namepre, start, nrecords,
sizeof(namepressure_t), field_offset_namepre, field_sizes_namepre,
namepre_out) < 0)
goto out;
/* compare the extracted table with the initial values */
for (i = 0; i < NRECORDS; i++) {
if ((HDstrcmp(namepre_out[i].name, namepre_in[i].name) != 0) ||
!H5_FLT_ABS_EQUAL(namepre_out[i].pressure, namepre_in[i].pressure)) {
goto out;
}
}
/* reset buffer */
for (i = 0; i < NRECORDS; i++) {
HDstrcpy(namepre_out[i].name, "\0");
namepre_out[i].pressure = -1;
}
/*-------------------------------------------------------------------------
* read only 3 records of the "Name,Pressure" fields, starting at record 2
*-------------------------------------------------------------------------
*/
/* write the new name and pressure information to all the records */
nfields = 2;
start = 2;
nrecords = 3;
if (H5TBread_fields_index(fid, "table12", nfields, field_index_namepre, start, nrecords,
sizeof(namepressure_t), field_offset_namepre, field_sizes_namepre,
namepre_out) < 0)
goto out;
/* compare the extracted table with the initial values */
for (i = 0; i < 3; i++) {
int iistart = (int)start;
if ((HDstrcmp(namepre_out[i].name, wbuf[iistart + (int)i].name) != 0) ||
!H5_FLT_ABS_EQUAL(namepre_out[i].pressure, wbuf[iistart + (int)i].pressure)) {
goto out;
}
}
PASSED();
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBinsert_field
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("inserting fields");
/* make a table */
if (H5TBmake_table(TITLE, fid, "table13", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill1, compress, wbuf) < 0)
goto out;
/* insert the new field at the end of the field list */
position = NFIELDS;
if (H5TBinsert_field(fid, "table13", "New Field", field_type_new, position, fill1_new, buf_new) < 0)
goto out;
/* read the table */
if (H5TBread_table(fid, "table13", dst_size2, dst_offset2, dst_sizes2, rbuf2) < 0)
goto out;
/* compare the extracted table with the original array */
for (i = 0; i < NRECORDS; i++) {
if ((HDstrcmp(rbuf2[i].name, wbuf[i].name) != 0) || rbuf2[i].lati != wbuf[i].lati ||
rbuf2[i].longi != wbuf[i].longi || !H5_FLT_ABS_EQUAL(rbuf2[i].pressure, wbuf[i].pressure) ||
!H5_DBL_ABS_EQUAL(rbuf2[i].temperature, wbuf[i].temperature) ||
rbuf2[i].new_field != buf_new[i]) {
goto out;
}
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBdelete_field
*
*-------------------------------------------------------------------------
*/
if (do_write) {
HL_TESTING2("deleting fields");
/* make a table */
if (H5TBmake_table(TITLE, fid, "table14", FIELDS, RECORDS, type_size_mem, field_names, field_offset,
field_type, chunk_size, fill, compress, wbuf) < 0)
goto out;
/* delete the field */
if (H5TBdelete_field(fid, "table14", "Pressure") < 0)
goto out;
/* read the table */
if (H5TBread_table(fid, "table14", dst_size3, dst_offset3, dst_sizes3, rbuf3) < 0)
goto out;
/* compare the extracted table with the original array */
for (i = 0; i < NRECORDS; i++) {
if ((HDstrcmp(rbuf3[i].name, wbuf[i].name) != 0) || rbuf3[i].lati != wbuf[i].lati ||
rbuf3[i].longi != wbuf[i].longi ||
!H5_DBL_ABS_EQUAL(rbuf3[i].temperature, wbuf[i].temperature)) {
goto out;
}
}
PASSED();
}
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBget_table_info
* H5TBget_field_info
*
*-------------------------------------------------------------------------
*/
HL_TESTING2("getting table info");
/* get table info */
if (H5TBget_table_info(fid, "table1", &rfields, &rrecords) < 0)
goto out;
if (NFIELDS != rfields || rrecords != NRECORDS) {
goto out;
}
PASSED();
/*-------------------------------------------------------------------------
*
* Functions tested:
*
* H5TBget_field_info
*
*-------------------------------------------------------------------------
*/
HL_TESTING2("getting field info");
/* allocate */
names_out = (char **)HDmalloc(sizeof(char *) * (size_t)NFIELDS);
for (i = 0; i < NFIELDS; i++) {
names_out[i] = (char *)HDmalloc(sizeof(char) * 255);
}
/* Get field info */
if (H5TBget_field_info(fid, "table1", names_out, sizes_out, offset_out, &size_out) < 0)
goto out;
for (i = 0; i < NFIELDS; i++) {
if ((HDstrcmp(field_names[i], names_out[i]) != 0)) {
goto out;
}
}
/* release */
for (i = 0; i < NFIELDS; i++) {
HDfree(names_out[i]);
}
HDfree(names_out);
PASSED();
/*-------------------------------------------------------------------------
* end
*-------------------------------------------------------------------------
*/
return 0;
out:
H5_FAILED();
return -1;
}
/*-------------------------------------------------------------------------
* the main program
*-------------------------------------------------------------------------
*/
int
main(void)
{
hid_t fid; /* identifier for the file */
unsigned flags = H5F_ACC_RDONLY;
/*-------------------------------------------------------------------------
* test1: create a file for the write/read test
*-------------------------------------------------------------------------
*/
/* create a file using default properties */
fid = H5Fcreate("test_table.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
HDputs("Testing table with file creation mode (read/write in native architecture):");
/* test, do write */
if (test_table(fid, 1) < 0)
goto out;
/* close */
H5Fclose(fid);
/*-------------------------------------------------------------------------
* test2: open a file written in test1 on a big-endian machine
*-------------------------------------------------------------------------
*/
HDputs("Testing table with file open mode (read big-endian data):");
fid = h5file_open(TEST_FILE_BE, flags);
/* test, do not write */
if (test_table(fid, 0) < 0)
goto out;
/* close */
H5Fclose(fid);
/*-------------------------------------------------------------------------
* test3: open a file written in test1 on a little-endian machine
*-------------------------------------------------------------------------
*/
HDputs("Testing table with file open mode (read little-endian data):");
fid = h5file_open(TEST_FILE_LE, flags);
/* test, do not write */
if (test_table(fid, 0) < 0)
goto out;
/* close */
H5Fclose(fid);
/*-------------------------------------------------------------------------
* test4: open a file written in test1 on the Cray T3 machine
*-------------------------------------------------------------------------
*/
HDputs("Testing table with file open mode (read Cray data):");
fid = h5file_open(TEST_FILE_CRAY, flags);
/* test, do not write */
if (test_table(fid, 0) < 0)
goto out;
/* close */
H5Fclose(fid);
return 0;
out:
H5Fclose(fid);
return 1;
}